Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0013012

Physical Location & Seq

Genomic Coordinates Reverse (-)

73026873 .. 73038950

Gene Structure 12078 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000021218

Sequence Viewer

CDS Protein Promoter (2k)

Length: 7440 bp

ATGGGCGATGGAGGAGTCGCATGCATGCCTTTGCAGCATAATATCATGGACAGGTTTCCAATTCCGGAGAAGACTGCGCTTTGCGGAGGCAATACTAATACTAATGCTACTACTACTACCACCGCTAACAATGGCTTCAATTCCAAGCCGGTTGTTAAGAAGAAGGTAATGAAGATCAGGAAGAAGATTGTCAAGAAGCCCAAGGCAAAAAGCAACAGTAACGTAGAGGAGTCGGGGAAGAGTGAGCTGGGATTGGTTAAAGGTGACAAGAGTGATACTACTAAGGAAGCAGAGAACAGTGGTGCCAAGGAAGCAGCCGAGAAGAGTGGTGTGAAGGAAGCTGAGAAGAGTGCTGTCAAGGAAGCTGGGAACAGTGCTGCTCAGGAAGTTGAGAACGTCGAAAATGGTGAGGATAAGAAGGAGGAAGTCGAAGAGGGTGAATTGGGGACTTTGAATGGTGAATTTGTTCCGGACAAGTGGCGGAGAAGCGAGGTTGAGAAGGAGGAGATTGGGGGTGAGAAATGGAGGAGAAGCGAGGTGGAGAAGGGAGAGTCTTTTTCTGGGAAATGGCGTAGAGGTGATGCAGAGAAGGCAGATATATATCCGGAGAAGAGTAGAAATAGTGAAGCTGAATTCGGCTCGTGGAGACCACCCAAGGATGAAATTGAAAGAGGTGAGTATATTCCAGATAGATGGCAAAAAGGAGAGCTGGCCAGAGATGACTACAGTAACCGAAAAATGCCCGCCAGGTATGATATGGGTGGGAGGGGCAGGGGAAGGGGCTGGAAATTTGAGTCCCCTTCTGGCAAGTATCCAAATGATGACGGGTTTAGAAGGAAAGAATATAGTAGAGGTGGGGGTCAGCACAGCAAGAGTACTTTCAGGTGGGATAGTGGCCAGGAGAGGAATACAAGGATCAGTTCCAAAATTGTTGATGATGAGGGTGTCTACAAGAATGAGTACAGCAGTGAGTACAGCAATGGTAAGTATCAAGCAAAGGATTACTCTTCTGTTAATCGGTTGAAGAGGTATGGTCCTGATTCAAATAGTAGTGAGCGGAAGCACTATGGAGATTATGGGGATTATGCGGGTTTAAAAAGTCGCAAGCTTTCTGATGAAAGTAATCGCTCTGCTCACTCTGAGCATTATTCACACCGTTCTGTGGAGAGATCTTATCGAAATCCTTCTTTTAGACCAGCATCAGACAAGTACTCTTCCAGGCATTATGAACCTGCTTTGTCTTCCAGAGTGGTTTATGACAGGCATGGGCGAAGTCCAGGTCTCTCCGAGCGGTCCCCACGTGACAGGTCCCGGTATTATGATCACCTGGACCGGAGTCCAGTGCGCCGTGAGAGATCTCCATATGATCTAGAGAGGTCCCCTTATGGCCGTGAGAAATCACCATATGGCCGTGAGAGATCTCCATATGGTCATGAGAAATCTCCATATGTTCGTGACAAATCTCCATATGTTCGTGACAGATCTCCATATGTTCGTGACAAGTCTCCATATGCTCGCGAGAAGTCACCATATGGACGTGAAAGATCTCCATATGTTCGTGACAGATCTCCTTATGTTCTGGAGAGGTCTCCATACGAACGGAGCCGTAATTATGATCACAGAAACCGCAGTTTGTCTCCGCAAGATCGACCTAGGTACCATGATCGCAGGGATCACACCCCAAACTATTTGGAGCGGTCACCACGTGGTGACCGGGGTAGAGCTTCTAGTTATAGAGGTACAGGCCGCAAAAGTGGAGCAAGTGATAGGCGCAACTCCCAATATAAAGCGCACGAAGATAAGCTGGTGGAGAAGGATCCCACGGGAACGGACTCGAATTCCTCTGCCAAAGAATGTCAGGATAGAAGCAGTGTTCTTGACATTAATGAAACCGTGGAGACAAACGCCAATTCTGAGTCTCACAAAGAAGAACCGTCTCAAAGTCCAAATATAAACTGCAAAGAAACTTCCCATATTAGTGCAGCCCCTCCTGAAGAGCTGCCTTCTATGGAAGAAGATATGGATATATGCGACACACCACCACATGTCCCGGTGATTGCTGATTCATCCACAGGGAAATGGTTTTACCTTGATTATTATGGTGTGGAATGTGGGCCTTCCAAATTATGTGAGCTTAAAGCACTTGTTGAAGAAGGAGCTCTGATGTCTGATCACATGGTCAAGCACTCAGACAGTGATAGGTGGGTAACTGTTGAAAATGCAGTTTCGCCATTGATTACCGTAAATTTTCCATCCATTGTATCGGACTCGATAACTGGACTAGTAAGCCCTCCAGAAGCTCCTGGCAATCTATTGGCAGATATTGGACATACTGGGCACTATGGTACTCAGAGTGGGAGTTTGCCGGGGTTGTGTGCAGATGTTGCTTCTGAGCCTCTAGAAGATTTGCACATTGAAGAAAGGGTTGGAGCTCTGATGGAAGGTTTAACAGTTATTCCTGGCAGGGAACTTGAAGCTGTTGGAGAAGTTCTGCAAATGTCATTTGAATCTGCTCAACTGGAAGTATGGGGAAACACTGAAGGTCTCTCTCAAGGTCATATCGGTGAACAGAATGATCAGAAAACTGAGGAACCACGATTTTCTGACATTAAAATGAAAGAAGCAGCAGAAATAGGGTTGACTTTACCCTCTGACAAAGATGCTTTTGCTTGTGGTGATTCTGGTGACTGGTTTTCTGGTCGATGGTCATGCAAGGGTGGTGATTGGAAAAGGAACGAAGAAGGTGTGCAAGATAGGTCTTCTAGAAAGAAACTTGTTGTCAATGATGGTTTCCCATTATGCCAGATGTCAAAATCTGGGTATGAAGACCCTCGATGGCAAAGAAAAGATGAACTGTATTATCCTTCACAGAACAGAAGGCTTGATCTACCTACTTGGGCTTTTTCATGTCCAGATGATGCTAATAGAGTGTCTCAAAGTAAGCCAACTGTTATAAAAGGAGTCAAAGGAACTATCCTTCCGGTAGTCAAGATAAATGCATGTGTTGTAAAAGACCACGGTTCATTTGTTTCTGAGCCGCGGATAAAAGCACGAGGAATGGAAAGGCATCCTTCGAGGTCTGCTCGGTCATATTCCGCAAGTAGTGATGGCAAGAGATCATCTGGCGATGGTGATTCTCAAATGAAACCAGTAGGTGACCGAGGCTCAAAGGTATCTTCCAAATGCATTTCCTCCATTAAAATCCCCAAAGACCGTATTGGCACAGTTGATGACTTGCAATTGCATTTGGGAGACTGGTACTACCTTGATGGTGCTGGGCATGAACGAGGACCTTCATCATTCTCTGAGCTACAGGCCTTGGTTGATCAAGGAGTGATCCTGAAACATAGCAGTGTGTTCCGGAAATTTGATAAAGTCTGGGTTCCAGTTACCTCTGCCATCGAGACTTCTGATGCTACCAAAATGAATAAGGAGAAGAACAGAACCTCAAGTAATTTTTCAGGGCAATCTCAAAGTGCTGCACTTGCAGAATCAAAAACAAATTTGAGTTGGTTGCAGAATCTGCACCCTCAGTTCATTGGTTATACATGCGGAAAGCTTCATGAATTGGTGATGAAATCTTACAAAAGTCGGGAGTTTGCTGCAGCCATAAATGAGGTTTTAGATCCGTGGATTAATGCAAGGCAGCCAAAAAAAGAGTTGGACAAGCACATGTACTGGAAAGCAGATGGTGATGCACGTTCTTCTAAAAGAGCTCGGTTGCTGGTTGATGAAAGTGAAGAAGACTATGACGCAGAAGAGGACTTGCAAACAATAGAAAAGGATGAATCCGCATTTGAGAATCTAATTGGTAATGCTTCTTTCTTCAGAGAAGACGGCTTGAGTTATGGATCAGAGATGGCAAGCTGGGGTTTATTGGATGGACATGTGCTGGCACGGGTCTTTCATTTTTTAAGATTAGACATGAAATCTCTTACCATTGCTTCTCTGACTTGTAAGCACTGGAGAGCTGCGGTCAGTTTTTACAAGGATATTTCAAGACAGGTAGACTTGTCATCCTTGGGTCCCCACTGCACCGACTCCATGATTGTGAACATTATGAGTGGTTATGGCAAAGAGAAGATTAATTCTATGGTTCTAATTGGCTGCACAAACATCACTCCCCAGACTCTTGAAGAGATTCTTGGTTCACTTCCTTGTCTATCTACCATAGATATTAGGGGTTGCAACCAGTTTGGTGAGTTGGTCATTAAATTTCAGAACCTGAACTGGATTAAGAGCCGAAGCTCACGTGGTACAAAGATACATGATGAATCCAATTCAAAATTAAGGAGTCTGAAATATATCAGTGAGAAATCTTCTTATGTTTCAAGAAGTAAGGTTCTGGGTAATGATATGGATGATTTTAGTGAACTCAAAGTGTACTTTGATAGTGTGGATAAGAGAGACTCAGCTAATCAATCATTCCGGGGAAGTTTATACAAACGTTCAAAACTATTTGATGCTAGACGGTCCTCATCCATTCTATCTAGGGATGCTCGTATGAGGCGGTTGTCCATTAAGAAATCAGAAAATGGTTATAAGAGGATGGAGGAATTTGTTGCTTCAAGTCTAAAGGACATCATGAAGGAGAATACATCTGATTTCTTTGTACCCAAGGTTGCTGAAATTCAAGATAGAATGAGAAATGGGTATTACATTCGCCGAGGATTGAGTTCTGTGAAGGAGGACATCAGTCGCATGTGCAGGGATGCAATTAAAGCAAAGAATCGTGGTGAAGCTGGAGATATTAATCACCTGAATCACATTATTAATTTATTTATACAACTTGCCACACGTTTGGAAGGGGCTTCCAAGTCGTCTGATGCAAGGGATGAGCTGATCAAGTCGTGGGAAGATGATACATTTGCAGTGGTTTCTTCTGCCTCCAAGAGTAAAAAGAAGCTCAATAAGACATCTGAAAGGAAGTTGAGGAGTAATGGTTCCTTTATGAATGGTAGTGTGGATAATGGAGAATATGCATCTGATCGAGAAATCAGAAGGCGTTTATCCAAGTTGAATAAAAAATCTATGGATTCAGAAAGTGAAACATCTGATGATCTTGATAGGTCATCTGAAGATAGCAAGAGCAATACTGAGAGTACTGCCTCAGATACAGAAAGTGACTTGGAATCTGGGTCACAGAGTCAACCTGGGCAATCAACAGCAGATGGATGCTTAGCTCATGATGAGGGTTCAGATTCCGTGACTGATGATCGTGAGTGGGGAGCTCGCATGACCAAATCAAGCTTGGTTCCTCCTGTTACGAGAAAATATGAAGTCATTCATGAATATGTTATTGTATCGCATGAAGAGGATGTAAAGCGGAAGATGCAGGTATCTTTGCCGGATGACTATGTTGAGAAGCTTTATTCGCAGAAGAATGGAACTGAGGAGTCTGATATGGAACTTCCTGAAGTCAAGGACTACAAGCCCAGGAAAATGCTTGGAGATGAGGTTCTAGAGCAAGAGGTTTATGGAATTGATCCCTACAGCCATAATCTTTTACTTGATTCCATGCCAGAGGAGTTGGATTGGCCTCTTTTAGAGAAGCATCTGTTTATAGAAGATGTGCTTCTTCGCACCCTGAATAAGCAAGTTAGACACTTTACTGGTACCGGAACTACTCCCATGATCTATCCTTTGCGGCCTGTTGTCGAAGATATTCGGAAAACTGCGGAAGAGGATAGTGATATTCGAACTGTGAGAATGTGCCAGGGTATTTTGAAGGCCATAGACAGTCGCCCTGATGATAAATATGTTGCTTATAGAAAGGGGCTCGGCGTCGTTTGCAACAAAGAAGAAGGTTTTGGAGAAGAAGATTTTGTTGTGGAATTTTTGGGGGAGGTATATCCTGTTTGGAAATGGTATGAGAAGCAAGATGGGATTCGATCTCTGCAGAAAAACAGTAAAGATCCAGCTCCAGAATTTTACAACATTTATCTTGAAAGGCCCAAGGGTGATGCTGATGGGTATGATTTAGTTGTTGTTGATGCCATGCATAAAGCAAACTATGCAAGTAGAATTTGTCACTCGTGCCGACCTAATTGTGAAGCAAAAGTTACTGCTGTCGATGGTCGGTACCAGATTGGTATCTACACTGTACGTAAAATTCAATATGGTGAAGAGATCACATTTGACTACAACTCTGTTACGGAGAGTAAGGAAGAATATGAAGCATCAGTTTGTTTGTGTGGCAGTCAAGTTTGCCGGGGAAGTTACCTGAATTTGACAGGCGAAGGAGCATTCCTGAAGGTGCTGAAGGATTGGCATGGAATTCTGGATCGTCATCATCTAATGCTGGAAGCTTGCGAGTTAAATTCAGTATCTGAGGAGGATTATCTTGACCTGGGAAGAGCTGGTTTAGGCAATTGTTTGCTTGGTGGGTTGCCAGATTGGGTGATTGCATATTCCGCTCGTTTGGTGAGGTTCATAAACTTCGAAAGAACAAAGCTTCCTGAGGTGATTTTAAAGCACAACTTAGAAGAAAAGAGGAAGTATTTCTCAGATATATGTCTTGAGGTTGAGAAGAGTGACGCGGAGGTTCAGGCTGAGGGTGTGTTCAACCAAAGGCTTCAGAATTTGGCTGTTACTCTTGACAAGGTGAGATATGTTTTGAGCTCCGTATTTGGCAACCCAAAGAATGCTCCACCTCCACTGGAGAGGTTAAGTCCAGAAGAAGCTGTTGGCTTTGTATGGAAGGGAGAAGGATCAGTTGTTGAGGAACTCCTTCAGAGCATGGCTCCTCATGTGGAGGAACAATTGCTAAATGATCTCAAGTCCAAGATGCTTGCTCATGATCCATCGGGTTCAGATGACATTTGGAAAGAACTTAAAAGATCGTTACTATGGTTGAGAGATGAGGTCCGGAATCTTCCATGTACATACAAGTCTCGGCATGATGCTGCTGCTGACTTGATCCATATTTATGCATACACAAGGTGCTACATTAGAATACGGGAATACAAATCAGTAACTTCACCGCCGGTTTACATTAGTCCACTTGACTTGGGCCCCAACTACACTAACAAATCGGGGGCAGATTTTCAGGAGTATTGCAAGACTTACGGGGAGAATTATTGTTTAGGGCAGCTATTTTTTTGGTATAATCAGTCTAATGCAGAGCCAGATTGTACTATGGCTAGAGCAAGTAGGGGTTGCTTATCATTACCTGATATCAGTTCCTTCTATGCCAAGATTTCGAAACCTACACGGCAGCGTGTTTATGGTCCAAAGGCTGTCAAATTTATGCTTTCAAGGATGGAGAAGCAGCCCCAAAAACCTTGGCCCAAGGATCGAATATGGTCATTTAATAGCTCCCCAAAAGTTCTTGGCAGTCCAATGCTAGATGCTGTTGTGAATAACTCTTTCTTGGACAAAGAAATGTTGCATTGGTTAAAGCACAGACCTGCAATATATCAAGCTATGTGGGATCGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0006325 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008757 GO:0009791 GO:0009908 GO:0009987 GO:0010228 GO:0016043 GO:0016278 GO:0016279 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018024 GO:0018193 GO:0018205 GO:0019538 GO:0022414 GO:0032259 GO:0032501 GO:0032502 GO:0034968 GO:0036211 GO:0042054 GO:0042800 GO:0043170 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048443 GO:0048466 GO:0048467 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0051276 GO:0051568 GO:0061458 GO:0071704 GO:0071840 GO:0090567 GO:0099402 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SET

Protein Analysis

2480

Amino Acids

280.97

Weight (kDa)

6.47

Isoelectric Point (pI)

54.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GYF_ATXR3	PF25531	692 - 739	2.1e-29	Histone-lysine N-methyltransferase ATXR3, GYF domain
GYF_ATXR3	PF25531	1084 - 1115	7.9e-08	Histone-lysine N-methyltransferase ATXR3, GYF domain
SET	PF00856	1841 - 2049	1.2e-12	SET domain
SDG2_C	PF19633	2060 - 2479	1.6e-236	Protein SET DOMAIN GROUP 2 C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0013012)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G15180
fragaria_vesca	FvH4_6g43760
malus_domestica	MD09G1103200.v1.1 MD17G1091000.v1.1
prunus_persica	Prupe.3G222600_v2.0.a1
pyrus_communis	pycom09g02660 pycom17g08780
rosa_chinensis	RchiOBHm_Chr2g0160501
rosa_laevigata	RLG00000021218
rosa_multiflora	Rmu_sc0000674.1_g000001
rosa_roxburghii	Rroxscaffold_2G00089780
rosa_rugosa	Rorug02G0483400 Rorug02G0483400
rosa_samantha	Rh2AG548700 Rh2BG562400 Rh2CG533000 Rh2DG571100
rosa_wichuraiana	Rw2G045430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	2954, 4542
Acc36I	ACCTGC	3 cut(s)	1240, 5326, 7417
Acc65I	GGTACC	3 cut(s)	1656, 5615, 6081
AccB1I	GGYRCC	4 cut(s)	302, 1656, 5615, 6081
AccBSI	CCGCTC	4 cut(s)	1057, 1291, 1696, 6416
AccI	GTMKAC	2 cut(s)	948, 4008
AccII	CGCG	3 cut(s)	1518, 3040, 6539
AccIII	TCCGGA	5 cut(s)	64, 469, 604, 3360, 6867
AclI	AACGTT	1 cut(s)	4447
AcoI	YGGCCR	4 cut(s)	711, 895, 1387, 1408
AcuI	CTGAAG	9 cut(s)	2013, 2559, 3811, 5097, 5436, 6272, 6281, 6560, 6716
AcvI	CACGTG	3 cut(s)	1301, 1706, 4253
AcyI	GRCGYC	1 cut(s)	5784
AdeI	CACNNNGTG	3 cut(s)	1706, 1709, 6942
AfiI	CCNNNNNNNGG	1 cut(s)	1162
AflIII	ACRYGT	4 cut(s)	2044, 3672, 3886, 4796
AhlI	ACTAGT	1 cut(s)	2281
AjiI	CACGTC	1 cut(s)	1538
AjuI	GAANNNNNNNTTGG	8 cut(s)	2409, 2441, 4128, 4160, 5793, 5825, 6669, 6701
AloI	GAACNNNNNNTCC	8 cut(s)	2962, 2994, 4927, 4959, 5442, 5474, 6439, 6471
Alw21I	GWGCWC	5 cut(s)	2161, 2434, 3718, 5233, 6623
AlwNI	CAGNNNCTG	3 cut(s)	3523, 4225, 6329
Aor13HI	TCCGGA	5 cut(s)	64, 469, 604, 3360, 6867
ApaI	GGGCCC	1 cut(s)	7016
ArsI	GACNNNNNNTTYG	2 cut(s)	1264, 1296
AseI	ATTAAT	5 cut(s)	1884, 3636, 4086, 4752, 4773
Asp700I	GAANNNNTTC	7 cut(s)	465, 1183, 4140, 5283, 5664, 6500, 6729
Asp718I	GGTACC	3 cut(s)	1656, 5615, 6081
AspA2I	CCTAGG	1 cut(s)	1652
AspLEI	GCGC	4 cut(s)	79, 1347, 1773, 1792
AsuC2I	CCSGG	6 cut(s)	1312, 1715, 2051, 2367, 4430, 6212
AsuII	TTCGAA	3 cut(s)	5698, 6441, 7202
AvrII	CCTAGG	1 cut(s)	1652
AxyI	CCTNAGG	1 cut(s)	6459
BaeGI	GKGCMC	2 cut(s)	2340, 7016
BaeI	ACNNNNGTAYC	2 cut(s)	1640, 1673
BalI	TGGCCA	2 cut(s)	713, 897
BamHI	GGATCC	1 cut(s)	1816
BanI	GGYRCC	4 cut(s)	302, 1656, 5615, 6081
BanII	GRGCYC	7 cut(s)	2161, 2434, 3718, 5233, 5781, 6623, 7016
BauI	CACGAG	3 cut(s)	640, 3051, 6034
BbrPI	CACGTG	3 cut(s)	1301, 1706, 4253
BbsI	GAAGAC	6 cut(s)	77, 1233, 2751, 2832, 3750, 3840
Bbv12I	GWGCWC	5 cut(s)	2161, 2434, 3718, 5233, 6623
BbvCI	CCTCAGC	1 cut(s)	6552
BceAI	ACGGC	6 cut(s)	1332, 1374, 1395, 1590, 3853, 7229
BcgI	CGANNNNNNTGC	2 cut(s)	2691, 2725
BciVI	GTATCC	1 cut(s)	822
BclI	TGATCA	6 cut(s)	1321, 1615, 2170, 2575, 3325, 4842
BcnI	CCSGG	6 cut(s)	1312, 1715, 2051, 2367, 4430, 6212
BcuI	ACTAGT	1 cut(s)	2281
BfmI	CTRYAG	5 cut(s)	724, 3311, 3603, 5491, 5897
BfuAI	ACCTGC	3 cut(s)	1240, 5326, 7417
BfuI	GTATCC	1 cut(s)	822
BglII	AGATCT	6 cut(s)	1169, 1355, 1418, 1481, 1544, 1565
BlnI	CCTAGG	1 cut(s)	1652
BlpI	GCTNAGC	1 cut(s)	5179
BmcAI	AGTACT	3 cut(s)	877, 1211, 5104
BmgBI	CACGTC	1 cut(s)	1538
BmrI	ACTGGG	1 cut(s)	2343
BmuI	ACTGGG	1 cut(s)	2343
BoxI	GACNNNNGTC	2 cut(s)	1335, 4695
BpiI	GAAGAC	6 cut(s)	77, 1233, 2751, 2832, 3750, 3840
BplI	GAGNNNNNCTC	4 cut(s)	3067, 3099, 6727, 6759
BpmI	CTGGAG	6 cut(s)	1601, 2277, 3985, 4764, 5907, 6680
Bpu10I	CCTNAGC	2 cut(s)	381, 6552
Bpu1102I	GCTNAGC	1 cut(s)	5179
Bpu14I	TTCGAA	3 cut(s)	5698, 6441, 7202
BpuEI	CTTGAG	5 cut(s)	2535, 3433, 3862, 6539, 6761
BpuMI	CCSGG	6 cut(s)	1312, 1715, 2051, 2367, 4430, 6212
BsaAI	YACGTR	4 cut(s)	1301, 1706, 4253, 6107
BsaBI	GATNNNNATC	4 cut(s)	600, 4752, 6092, 6288
BsaHI	GRCGYC	1 cut(s)	5784
BsaI	GGTCTC	4 cut(s)	640, 1286, 1593, 2549
BsaWI	WCCGGW	8 cut(s)	64, 469, 604, 1332, 2980, 3360, 5618, 6867
BsaXI	ACNNNNNCTCC	4 cut(s)	4927, 4957, 5442, 5472
Bsc4I	CCNNNNNNNGG	1 cut(s)	1162
Bse118I	RCCGGY	2 cut(s)	148, 6985
Bse21I	CCTNAGG	1 cut(s)	6459
Bse3DI	GCAATG	2 cut(s)	985, 3939
Bse8I	GATNNNNATC	4 cut(s)	600, 4752, 6092, 6288
BseAI	TCCGGA	5 cut(s)	64, 469, 604, 3360, 6867
BseJI	GATNNNNATC	4 cut(s)	600, 4752, 6092, 6288
BseLI	CCNNNNNNNGG	1 cut(s)	1162
BseMI	GCAATG	2 cut(s)	985, 3939
BseRI	GAGGAG	9 cut(s)	27, 242, 518, 541, 4948, 5408, 5540, 6347, 6735
BseSI	GKGCMC	2 cut(s)	2340, 7016
BseYI	CCCAGC	4 cut(s)	247, 365, 3275, 3867
BsgI	GTGCAG	7 cut(s)	2001, 2397, 3465, 3509, 4018, 4093, 4726
Bsh1236I	CGCG	3 cut(s)	1518, 3040, 6539
BshNI	GGYRCC	4 cut(s)	302, 1656, 5615, 6081
BsiHKAI	GWGCWC	5 cut(s)	2161, 2434, 3718, 5233, 6623
BslFI	GGGAC	7 cut(s)	460, 781, 1279, 1294, 1363, 2033, 4011
BslI	CCNNNNNNNGG	1 cut(s)	1162
BsmBI	CGTCTC	1 cut(s)	1941
BsmFI	GGGAC	7 cut(s)	460, 781, 1279, 1294, 1363, 2033, 4011
BsmI	GAATGC	2 cut(s)	6245, 6649
Bso31I	GGTCTC	4 cut(s)	640, 1286, 1593, 2549
Bsp119I	TTCGAA	3 cut(s)	5698, 6441, 7202
Bsp120I	GGGCCC	1 cut(s)	7012
Bsp1286I	GDGCHC	8 cut(s)	2161, 2340, 2434, 3718, 5233, 5781, 6623, 7016
Bsp13I	TCCGGA	5 cut(s)	64, 469, 604, 3360, 6867
Bsp1407I	TGTACA	1 cut(s)	6881
Bsp1720I	GCTNAGC	1 cut(s)	5179
Bsp68I	TCGCGA	1 cut(s)	1518
BspEI	TCCGGA	5 cut(s)	64, 469, 604, 3360, 6867
BspFNI	CGCG	3 cut(s)	1518, 3040, 6539
BspHI	TCATGA	6 cut(s)	1432, 3562, 4584, 5185, 5287, 6796
BspMAI	CTGCAG	2 cut(s)	3607, 5901
BspMI	ACCTGC	3 cut(s)	1240, 5326, 7417
BspQI	GCTCTTC	2 cut(s)	1989, 6349
BspT104I	TTCGAA	3 cut(s)	5698, 6441, 7202
BspT107I	GGYRCC	4 cut(s)	302, 1656, 5615, 6081
BspTNI	GGTCTC	4 cut(s)	640, 1286, 1593, 2549
BsrBI	CCGCTC	4 cut(s)	1057, 1291, 1696, 6416
BsrDI	GCAATG	2 cut(s)	985, 3939
BsrFI	RCCGGY	2 cut(s)	148, 6985
BsrGI	TGTACA	1 cut(s)	6881
BssAI	RCCGGY	2 cut(s)	148, 6985
BssNI	GRCGYC	1 cut(s)	5784
BssSI	CACGAG	3 cut(s)	640, 3051, 6034
Bst2BI	CACGAG	3 cut(s)	640, 3051, 6034
BstACI	GRCGYC	1 cut(s)	5784
BstAPI	GCANNNNNTGC	3 cut(s)	2384, 3523, 6014
BstAUI	TGTACA	1 cut(s)	6881
BstBAI	YACGTR	4 cut(s)	1301, 1706, 4253, 6107
BstBI	TTCGAA	3 cut(s)	5698, 6441, 7202
BstDSI	CCRYGG	5 cut(s)	1821, 1893, 3016, 3038, 3629
BstEII	GGTNACC	3 cut(s)	1698, 1709, 3155
BstFNI	CGCG	3 cut(s)	1518, 3040, 6539
BstHHI	GCGC	4 cut(s)	79, 1347, 1773, 1792
BstNSI	RCATGY	8 cut(s)	24, 28, 2048, 3003, 3552, 3676, 3890, 4705
BstPAI	GACNNNNGTC	2 cut(s)	1335, 4695
BstPI	GGTNACC	3 cut(s)	1698, 1709, 3155
BstSFI	CTRYAG	5 cut(s)	724, 3311, 3603, 5491, 5897
BstSLI	GKGCMC	2 cut(s)	2340, 7016
BstSNI	TACGTA	1 cut(s)	6107
BstUI	CGCG	3 cut(s)	1518, 3040, 6539
BstV2I	GAAGAC	6 cut(s)	77, 1233, 2751, 2832, 3750, 3840
BstX2I	RGATCY	9 cut(s)	1169, 1355, 1418, 1481, 1544, 1565, 1816, 3625, 5914
BstXI	CCANNNNNNTGG	2 cut(s)	693, 4801
BstYI	RGATCY	9 cut(s)	1169, 1355, 1418, 1481, 1544, 1565, 1816, 3625, 5914
Bsu36I	CCTNAGG	1 cut(s)	6459
BsuI	GTATCC	1 cut(s)	822
BtgI	CCRYGG	5 cut(s)	1821, 1893, 3016, 3038, 3629
BtgZI	GCGATG	2 cut(s)	21, 3141
BtrI	CACGTC	1 cut(s)	1538
BtsI	GCAGTG	5 cut(s)	973, 1876, 3358, 4030, 4878
BtuMI	TCGCGA	1 cut(s)	1518
BveI	ACCTGC	3 cut(s)	1240, 5326, 7417
CaiI	CAGNNNCTG	3 cut(s)	3523, 4225, 6329
CciI	TCATGA	6 cut(s)	1432, 3562, 4584, 5185, 5287, 6796
CfoI	GCGC	4 cut(s)	79, 1347, 1773, 1792
Cfr10I	RCCGGY	2 cut(s)	148, 6985
Cfr42I	CCGCGG	1 cut(s)	3041
CseI	GACGC	3 cut(s)	3761, 5773, 6545
CspCI	CAANNNNNGTGG	3 cut(s)	6990, 7025, 7409
DraI	TTTAAA	2 cut(s)	1095, 6471
DraIII	CACNNNGTG	3 cut(s)	1706, 1709, 6942
EaeI	YGGCCR	4 cut(s)	711, 895, 1387, 1408
EciI	GGCGGA	1 cut(s)	496
Ecl136II	GAGCTC	5 cut(s)	2159, 2432, 3716, 5231, 6621
Eco105I	TACGTA	1 cut(s)	6107
Eco147I	AGGCCT	1 cut(s)	3317
Eco24I	GRGCYC	7 cut(s)	2161, 2434, 3718, 5233, 5781, 6623, 7016
Eco31I	GGTCTC	4 cut(s)	640, 1286, 1593, 2549
Eco32I	GATATC	1 cut(s)	7177
Eco53kI	GAGCTC	5 cut(s)	2159, 2432, 3716, 5231, 6621
Eco57I	CTGAAG	9 cut(s)	2013, 2559, 3811, 5097, 5436, 6272, 6281, 6560, 6716
Eco72I	CACGTG	3 cut(s)	1301, 1706, 4253
Eco81I	CCTNAGG	1 cut(s)	6459
Eco91I	GGTNACC	3 cut(s)	1698, 1709, 3155
EcoICRI	GAGCTC	5 cut(s)	2159, 2432, 3716, 5231, 6621
EcoO109I	RGGNCCY	5 cut(s)	1308, 1377, 3290, 4025, 7013
EcoO65I	GGTNACC	3 cut(s)	1698, 1709, 3155
EcoRI	GAATTC	3 cut(s)	632, 1837, 6276
EcoRV	GATATC	1 cut(s)	7177
EcoT22I	ATGCAT	6 cut(s)	26, 3001, 3188, 4984, 6003, 6934
EcoT38I	GRGCYC	7 cut(s)	2161, 2434, 3718, 5233, 5781, 6623, 7016
Esp3I	CGTCTC	1 cut(s)	1941
FalI	AAGNNNNNCTT	8 cut(s)	3055, 3087, 4128, 4160, 5559, 5591, 6464, 6496
FaqI	GGGAC	7 cut(s)	460, 781, 1279, 1294, 1363, 2033, 4011
FauI	CCCGC	2 cut(s)	751, 1081
FauNDI	CATATG	9 cut(s)	1363, 1405, 1426, 1447, 1468, 1489, 1510, 1531, 1552
FbaI	TGATCA	6 cut(s)	1321, 1615, 2170, 2575, 3325, 4842
FblI	GTMKAC	2 cut(s)	948, 4008
FriOI	GRGCYC	7 cut(s)	2161, 2434, 3718, 5233, 5781, 6623, 7016
GlaI	GCGC	4 cut(s)	78, 1346, 1772, 1791
GsaI	CCCAGC	4 cut(s)	251, 369, 3279, 3871
GsuI	CTGGAG	6 cut(s)	1601, 2277, 3985, 4764, 5907, 6680
HgaI	GACGC	3 cut(s)	3761, 5773, 6545
HhaI	GCGC	4 cut(s)	79, 1347, 1773, 1792
Hin1I	GRCGYC	1 cut(s)	5784
Hin6I	GCGC	4 cut(s)	77, 1345, 1771, 1790
HinP1I	GCGC	4 cut(s)	77, 1345, 1771, 1790
HincII	GTYRAC	2 cut(s)	2640, 5150
HindII	GTYRAC	2 cut(s)	2640, 5150
HindIII	AAGCTT	6 cut(s)	1106, 3557, 5248, 5366, 6306, 6452
Hpy99I	CGWCG	2 cut(s)	401, 5789
Hsp92I	GRCGYC	1 cut(s)	5784
HspAI	GCGC	4 cut(s)	77, 1345, 1771, 1790
KflI	GGGWCCC	1 cut(s)	4025
Kpn2I	TCCGGA	5 cut(s)	64, 469, 604, 3360, 6867
KpnI	GGTACC	3 cut(s)	1660, 5619, 6085
Ksp22I	TGATCA	6 cut(s)	1321, 1615, 2170, 2575, 3325, 4842
KspI	CCGCGG	1 cut(s)	3041
LguI	GCTCTTC	2 cut(s)	1989, 6349
MbiI	CCGCTC	4 cut(s)	1057, 1291, 1696, 6416
MfeI	CAATTG	3 cut(s)	3239, 6370, 6761
MflI	RGATCY	9 cut(s)	1169, 1355, 1418, 1481, 1544, 1565, 1816, 3625, 5914
MhlI	GDGCHC	8 cut(s)	2161, 2340, 2434, 3718, 5233, 5781, 6623, 7016
MlsI	TGGCCA	2 cut(s)	713, 897
MluNI	TGGCCA	2 cut(s)	713, 897
MmeI	TCCRAC	4 cut(s)	2407, 2461, 3642, 5511
Mox20I	TGGCCA	2 cut(s)	713, 897
Mph1103I	ATGCAT	6 cut(s)	26, 3001, 3188, 4984, 6003, 6934
MroI	TCCGGA	5 cut(s)	64, 469, 604, 3360, 6867
MroXI	GAANNNNTTC	7 cut(s)	465, 1183, 4140, 5283, 5664, 6500, 6729
MscI	TGGCCA	2 cut(s)	713, 897
MslI	CAYNNNNRTG	7 cut(s)	1977, 2562, 2612, 3351, 4049, 5292, 6927
Msp20I	TGGCCA	2 cut(s)	713, 897
MspA1I	CMGCKG	1 cut(s)	3040
MunI	CAATTG	3 cut(s)	3239, 6370, 6761
Mva1269I	GAATGC	2 cut(s)	6245, 6649
MvnI	CGCG	3 cut(s)	1518, 3040, 6539
NciI	CCSGG	6 cut(s)	1312, 1715, 2051, 2367, 4430, 6212
NdeI	CATATG	9 cut(s)	1363, 1405, 1426, 1447, 1468, 1489, 1510, 1531, 1552
NmeAIII	GCCGAG	4 cut(s)	343, 4691, 5760, 6874
NruI	TCGCGA	1 cut(s)	1518
NsiI	ATGCAT	6 cut(s)	26, 3001, 3188, 4984, 6003, 6934
NspI	RCATGY	8 cut(s)	24, 28, 2048, 3003, 3552, 3676, 3890, 4705
NspV	TTCGAA	3 cut(s)	5698, 6441, 7202
PaeI	GCATGC	2 cut(s)	24, 28
PagI	TCATGA	6 cut(s)	1432, 3562, 4584, 5185, 5287, 6796
PceI	AGGCCT	1 cut(s)	3317
PciI	ACATGT	3 cut(s)	2044, 3672, 3886
PciSI	GCTCTTC	2 cut(s)	1989, 6349
PctI	GAATGC	2 cut(s)	6245, 6649
PdmI	GAANNNNTTC	7 cut(s)	465, 1183, 4140, 5283, 5664, 6500, 6729
PmaCI	CACGTG	3 cut(s)	1301, 1706, 4253
PmlI	CACGTG	3 cut(s)	1301, 1706, 4253
Ppu21I	YACGTR	4 cut(s)	1301, 1706, 4253, 6107
PpuMI	RGGWCCY	4 cut(s)	1308, 1377, 3290, 4025
PscI	ACATGT	3 cut(s)	2044, 3672, 3886
PshAI	GACNNNNGTC	2 cut(s)	1335, 4695
PshBI	ATTAAT	5 cut(s)	1884, 3636, 4086, 4752, 4773
PsiI	TTATAA	2 cut(s)	2954, 4542
Psp124BI	GAGCTC	5 cut(s)	2161, 2434, 3718, 5233, 6623
Psp1406I	AACGTT	1 cut(s)	4447
Psp5II	RGGWCCY	4 cut(s)	1308, 1377, 3290, 4025
PspCI	CACGTG	3 cut(s)	1301, 1706, 4253
PspEI	GGTNACC	3 cut(s)	1698, 1709, 3155
PspFI	CCCAGC	4 cut(s)	247, 365, 3275, 3867
PspOMI	GGGCCC	1 cut(s)	7012
PspPPI	RGGWCCY	4 cut(s)	1308, 1377, 3290, 4025
PstI	CTGCAG	2 cut(s)	3607, 5901
PstNI	CAGNNNCTG	3 cut(s)	3523, 4225, 6329
PsuI	RGATCY	9 cut(s)	1169, 1355, 1418, 1481, 1544, 1565, 1816, 3625, 5914
RruI	TCGCGA	1 cut(s)	1518
RseI	CAYNNNNRTG	7 cut(s)	1977, 2562, 2612, 3351, 4049, 5292, 6927
SacI	GAGCTC	5 cut(s)	2161, 2434, 3718, 5233, 6623
SacII	CCGCGG	1 cut(s)	3041
SapI	GCTCTTC	2 cut(s)	1989, 6349
ScaI	AGTACT	3 cut(s)	877, 1211, 5104
SduI	GDGCHC	8 cut(s)	2161, 2340, 2434, 3718, 5233, 5781, 6623, 7016
SfcI	CTRYAG	5 cut(s)	724, 3311, 3603, 5491, 5897
Sfr303I	CCGCGG	1 cut(s)	3041
SfuI	TTCGAA	3 cut(s)	5698, 6441, 7202
SgrBI	CCGCGG	1 cut(s)	3041
SmiMI	CAYNNNNRTG	7 cut(s)	1977, 2562, 2612, 3351, 4049, 5292, 6927
SmlI	CTYRAG	5 cut(s)	2550, 3448, 3841, 6518, 6776
SmoI	CTYRAG	5 cut(s)	2550, 3448, 3841, 6518, 6776
SnaBI	TACGTA	1 cut(s)	6107
SpeI	ACTAGT	1 cut(s)	2281
SphI	GCATGC	2 cut(s)	24, 28
SseBI	AGGCCT	1 cut(s)	3317
SstI	GAGCTC	5 cut(s)	2161, 2434, 3718, 5233, 6623
StuI	AGGCCT	1 cut(s)	3317
TaqII	GACCGA	2 cut(s)	3075, 3174
TatI	WGTACW	9 cut(s)	875, 960, 972, 1209, 3675, 4383, 5102, 6881, 7133
TauI	GCSGC	3 cut(s)	1749, 3040, 5650
TspGWI	ACGGA	6 cut(s)	1615, 1844, 3618, 5194, 6170, 6613
VspI	ATTAAT	5 cut(s)	1884, 3636, 4086, 4752, 4773
XbaI	TCTAGA	4 cut(s)	1369, 2398, 2762, 5461
XceI	RCATGY	8 cut(s)	24, 28, 2048, 3003, 3552, 3676, 3890, 4705
XcmI	CCANNNNNNNNNTGG	2 cut(s)	754, 5248
XmaJI	CCTAGG	1 cut(s)	1652
XmiI	GTMKAC	2 cut(s)	948, 4008
XmnI	GAANNNNTTC	7 cut(s)	465, 1183, 4140, 5283, 5664, 6500, 6729
ZrmI	AGTACT	3 cut(s)	877, 1211, 5104
Zsp2I	ATGCAT	6 cut(s)	26, 3001, 3188, 4984, 6003, 6934

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.