FvH4_6g45240

carboxylesterase 17

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0009064
Physical Location & Seq
Reverse (-)
34772288 .. 34773298
1011 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g45240.t1

Sequence Viewer

Length: 1011 bp
ATGGCAACCATTTCCTACGATGCGAGGCCTAATCTTCAAGCAACTACTAACCATAGTCATCAACATGGAGTTGTTGTTGAAGAAATTGAAGGCCTTATCAGAGTCCACAAAAATGGATACATAGAAAGGCCTTCACTCATCCCTAGTGTCCCTTGCACTACTGCAACAGCTAGAGATGTTGTCATTGACAAATTCTCCAACCTGTGGGCTCGTGTTTATGTTCCCAGCCATCCTGGGGCCAACAACCTCCCGGTGCTTGTTTACTTTCACGGTGGTGGATTCTGTGTTGGCTCTGCTGCTTGGAGCTGCTACCATGAGTTCCTCACCAACCTTGCTTGTAAAGCAAGTTGTGTCATTATCTCTGTGAATTATCGTTTAGCCCCTGAGAGCCGTCTCCCTGCTGCTTATGATGATGGTGTCAATGCTGTTATGTGGGTGAAACAACAAGCTCTAAGTGGCAGCACTGAGCAAAAATGGTGGTTAAGTAGGTGCAACTTCTCAAGCTTGTTCATAACTGGTGACAGTGCAGGGGCTAACATAGCCTACAATGTCACCACCCGGTTATCAAATGAACACTTACAGCCTCTGCGTCTCAAAGGTACTGTTTTGATCCAACCTTTCTTTGGAGGTGAAGCACGTACTTGGTCTGAAAAGTATGCAACTCAGCCACCACACTCTGCACTAACTCTATCAAATTCCGATGTGTATTGGCGACTGTCACTGCCGTTGGGGGCCAACCGAGACCATCCATGGTGCAATCCCTTAGCAAATGGTGTGGCCAAGTTGAGGGATTTGAGAATCCCTCGTATAATGGTGTGCATATCAGAGTTGGATATATTGAAGGATAGGAATTTGGAGCTGTGCAATGCTTTGACTAGCTTGGGGAAACAGGTGGAAACAGTAATGTACAAAGGGGTTGGTCATGCATTTCAAGTTCTGCATAACTCTCAGCTCTCTCGTCCCAGGACCCAGGAGTTAGTCTCTCACATCAAGGCTTTCATAAACCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009056 GO:0016787
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

337

Amino Acids

37.35

Weight (kDa)

8.82

Isoelectric Point (pI)

39.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
COesterase PF00135 71 - 128 2.1e-09 Carboxylesterase family
BD-FAE PF20434 72 - 187 6.2e-12 BD-FAE
Abhydrolase_3 PF07859 86 - 311 5.2e-60 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 204
AclWI GGATC 1 cut(s) 604
AcoI YGGCCR 1 cut(s) 777
AcsI RAATTY 3 cut(s) 191, 694, 850
AfaI GTAC 3 cut(s) 601, 640, 908
AfiI CCNNNNNNNGG 4 cut(s) 204, 235, 623, 786
AgsI TTSAA 5 cut(s) 38, 80, 89, 841, 932
AjnI CCWGG 3 cut(s) 232, 962, 969
AleI CACNNNNGTG 1 cut(s) 273
AluBI AGCT 7 cut(s) 170, 306, 449, 504, 859, 879, 952
AluI AGCT 7 cut(s) 170, 306, 449, 504, 859, 879, 952
Alw26I GTCTC 4 cut(s) 398, 596, 735, 985
AlwI GGATC 1 cut(s) 604
AlwNI CAGNNNCTG 1 cut(s) 586
AoxI GGCC 6 cut(s) 26, 91, 128, 237, 732, 777
ApeKI GCWGC 4 cut(s) 296, 306, 401, 459
ApoI RAATTY 3 cut(s) 191, 694, 850
AspS9I GGNCC 3 cut(s) 237, 732, 966
AsuC2I CCSGG 2 cut(s) 251, 559
AsuHPI GGTGA 5 cut(s) 316, 448, 530, 544, 641
AvaII GGWCC 1 cut(s) 966
BalI TGGCCA 1 cut(s) 779
BanII GRGCYC 1 cut(s) 211
BauI CACGAG 1 cut(s) 210
BbvI GCAGC 4 cut(s) 283, 293, 388, 471
BccI CCATC 3 cut(s) 237, 407, 753
BceAI ACGGC 2 cut(s) 375, 709
BciT130I CCWGG 3 cut(s) 234, 964, 971
BciVI GTATCC 1 cut(s) 110
BcnI CCSGG 2 cut(s) 251, 559
BcoDI GTCTC 4 cut(s) 398, 596, 735, 985
BfaI CTAG 3 cut(s) 144, 171, 876
BfuI GTATCC 1 cut(s) 110
BisI GCNGC 4 cut(s) 297, 307, 402, 460
BlsI GCNGC 4 cut(s) 298, 308, 403, 461
Bme1390I CCNGG 5 cut(s) 234, 251, 559, 964, 971
Bme18I GGWCC 1 cut(s) 966
BmgT120I GGNCC 3 cut(s) 237, 732, 966
BmiI GGNNCC 3 cut(s) 238, 733, 968
BmrFI CCNGG 5 cut(s) 234, 251, 559, 964, 971
BmsI GCATC 1 cut(s) 10
BplI GAGNNNNNCTC 4 cut(s) 787, 819, 965, 997
Bpu10I CCTNAGC 1 cut(s) 763
BpuEI CTTGAG 1 cut(s) 484
BpuMI CCSGG 2 cut(s) 251, 559
BsaAI YACGTR 1 cut(s) 638
BsaI GGTCTC 1 cut(s) 735
BsaJI CCNNGG 4 cut(s) 233, 749, 962, 969
BsaXI ACNNNNNCTCC 4 cut(s) 60, 90, 179, 209
Bsc4I CCNNNNNNNGG 4 cut(s) 204, 235, 623, 786
Bse1I ACTGG 2 cut(s) 520, 1006
Bse3DI GCAATG 1 cut(s) 871
BseBI CCWGG 3 cut(s) 234, 964, 971
BseDI CCNNGG 4 cut(s) 233, 749, 962, 969
BseGI GGATG 3 cut(s) 138, 229, 745
BseLI CCNNNNNNNGG 4 cut(s) 204, 235, 623, 786
BseMI GCAATG 1 cut(s) 871
BseMII CTCAG 4 cut(s) 375, 456, 677, 962
BseNI ACTGG 2 cut(s) 520, 1006
BseXI GCAGC 4 cut(s) 283, 293, 388, 471
BseYI CCCAGC 1 cut(s) 224
BsgI GTGCAG 2 cut(s) 546, 663
BshFI GGCC 6 cut(s) 28, 93, 130, 239, 734, 779
BsiSI CCGG 2 cut(s) 251, 559
BslFI GGGAC 2 cut(s) 134, 945
BslI CCNNNNNNNGG 4 cut(s) 204, 235, 623, 786
BsmAI GTCTC 4 cut(s) 398, 596, 735, 985
BsmBI CGTCTC 2 cut(s) 398, 596
BsmFI GGGAC 2 cut(s) 134, 945
BsnI GGCC 6 cut(s) 28, 93, 130, 239, 734, 779
Bso31I GGTCTC 1 cut(s) 735
Bsp1286I GDGCHC 1 cut(s) 211
Bsp1407I TGTACA 1 cut(s) 906
Bsp143I GATC 1 cut(s) 609
Bsp19I CCATGG 1 cut(s) 749
BspANI GGCC 6 cut(s) 28, 93, 130, 239, 734, 779
BspCNI CTCAG 4 cut(s) 376, 457, 676, 961
BspLI GGNNCC 3 cut(s) 238, 733, 968
BspPI GGATC 1 cut(s) 604
BspTNI GGTCTC 1 cut(s) 735
BsrDI GCAATG 1 cut(s) 871
BsrGI TGTACA 1 cut(s) 906
BsrI ACTGG 2 cut(s) 520, 1006
BssECI CCNNGG 4 cut(s) 233, 749, 962, 969
BssMI GATC 1 cut(s) 609
BssSI CACGAG 1 cut(s) 210
BssT1I CCWWGG 1 cut(s) 749
Bst2BI CACGAG 1 cut(s) 210
Bst2UI CCWGG 3 cut(s) 234, 964, 971
Bst4CI ACNGT 5 cut(s) 272, 524, 604, 717, 901
BstAUI TGTACA 1 cut(s) 906
BstBAI YACGTR 1 cut(s) 638
BstDEI CTNAG 6 cut(s) 384, 452, 465, 663, 763, 948
BstDSI CCRYGG 1 cut(s) 749
BstF5I GGATG 3 cut(s) 138, 229, 745
BstKTI GATC 1 cut(s) 612
BstMAI GTCTC 4 cut(s) 398, 596, 735, 985
BstMBI GATC 1 cut(s) 609
BstMWI GCNNNNNNNGC 2 cut(s) 341, 539
BstNI CCWGG 3 cut(s) 234, 964, 971
BstSCI CCNGG 5 cut(s) 232, 249, 557, 962, 969
BstV1I GCAGC 4 cut(s) 283, 293, 388, 471
BstXI CCANNNNNNTGG 1 cut(s) 113
BsuI GTATCC 1 cut(s) 110
BsuRI GGCC 6 cut(s) 28, 93, 130, 239, 734, 779
BtgI CCRYGG 1 cut(s) 749
BtsCI GGATG 3 cut(s) 138, 229, 745
BtsI GCAGTG 1 cut(s) 719
BtsIMutI CAGTG 3 cut(s) 462, 529, 719
CaiI CAGNNNCTG 1 cut(s) 586
Cfr13I GGNCC 3 cut(s) 237, 732, 966
CseI GACGC 1 cut(s) 578
Csp6I GTAC 3 cut(s) 600, 639, 907
CspCI CAANNNNNGTGG 4 cut(s) 458, 493, 756, 791
CviAII CATG 4 cut(s) 65, 314, 750, 923
CviQI GTAC 3 cut(s) 600, 639, 907
DdeI CTNAG 6 cut(s) 384, 452, 465, 663, 763, 948
DpnI GATC 1 cut(s) 611
DpnII GATC 1 cut(s) 609
EaeI YGGCCR 1 cut(s) 777
Eco130I CCWWGG 1 cut(s) 749
Eco147I AGGCCT 3 cut(s) 28, 93, 130
Eco24I GRGCYC 1 cut(s) 211
Eco31I GGTCTC 1 cut(s) 735
Eco47I GGWCC 1 cut(s) 966
EcoO109I RGGNCCY 1 cut(s) 966
EcoRII CCWGG 3 cut(s) 232, 962, 969
EcoT14I CCWWGG 1 cut(s) 749
EcoT22I ATGCAT 1 cut(s) 928
EcoT38I GRGCYC 1 cut(s) 211
ErhI CCWWGG 1 cut(s) 749
Esp3I CGTCTC 2 cut(s) 398, 596
FaeI CATG 4 cut(s) 68, 317, 753, 926
FaqI GGGAC 2 cut(s) 134, 945
FatI CATG 4 cut(s) 64, 313, 749, 922
Fnu4HI GCNGC 4 cut(s) 297, 307, 402, 460
FokI GGATG 3 cut(s) 125, 216, 732
FriOI GRGCYC 1 cut(s) 211
Fsp4HI GCNGC 4 cut(s) 297, 307, 402, 460
FspBI CTAG 3 cut(s) 144, 171, 876
GluI GCNGC 4 cut(s) 297, 307, 402, 460
GsaI CCCAGC 1 cut(s) 228
HaeIII GGCC 6 cut(s) 28, 93, 130, 239, 734, 779
HapII CCGG 2 cut(s) 251, 559
HgaI GACGC 1 cut(s) 578
Hin1II CATG 4 cut(s) 68, 317, 753, 926
HindIII AAGCTT 1 cut(s) 502
HinfI GANTC 3 cut(s) 102, 279, 798
HpaII CCGG 2 cut(s) 251, 559
HphI GGTGA 5 cut(s) 316, 448, 530, 544, 641
Hpy166II GTNNAC 2 cut(s) 106, 262
Hpy188I TCNGA 4 cut(s) 101, 649, 700, 826
Hpy8I GTNNAC 2 cut(s) 106, 262
HpyAV CCTTC 3 cut(s) 83, 141, 835
HpyCH4III ACNGT 5 cut(s) 272, 524, 604, 717, 901
HpyCH4IV ACGT 1 cut(s) 637
HpyF10VI GCNNNNNNNGC 2 cut(s) 341, 539
HpyF3I CTNAG 6 cut(s) 384, 452, 465, 663, 763, 948
HpySE526I ACGT 1 cut(s) 637
Hsp92II CATG 4 cut(s) 68, 317, 753, 926
Kzo9I GATC 1 cut(s) 609
LmnI GCTCC 2 cut(s) 303, 856
Lsp1109I GCAGC 4 cut(s) 283, 293, 388, 471
LweI GCATC 1 cut(s) 10
MaeI CTAG 3 cut(s) 144, 171, 876
MaeII ACGT 1 cut(s) 637
MaeIII GTNAC 3 cut(s) 518, 550, 717
MalI GATC 1 cut(s) 611
MboI GATC 1 cut(s) 609
MboII GAAGA 2 cut(s) 26, 92
MhlI GDGCHC 1 cut(s) 211
MlsI TGGCCA 1 cut(s) 779
MluCI AATT 5 cut(s) 84, 191, 367, 694, 850
MluNI TGGCCA 1 cut(s) 779
MlyI GAGTC 1 cut(s) 111
MmeI TCCRAC 3 cut(s) 222, 637, 810
MnlI CCTC 7 cut(s) 18, 257, 332, 594, 620, 780, 813
Mox20I TGGCCA 1 cut(s) 779
Mph1103I ATGCAT 1 cut(s) 928
MscI TGGCCA 1 cut(s) 779
MseI TTAA 1 cut(s) 482
MslI CAYNNNNRTG 3 cut(s) 63, 111, 273
Msp20I TGGCCA 1 cut(s) 779
MspI CCGG 2 cut(s) 251, 559
MspR9I CCNGG 5 cut(s) 234, 251, 559, 964, 971
MvaI CCWGG 3 cut(s) 234, 964, 971
MwoI GCNNNNNNNGC 2 cut(s) 341, 539
NciI CCSGG 2 cut(s) 251, 559
NcoI CCATGG 1 cut(s) 749
NdeII GATC 1 cut(s) 609
NlaIII CATG 4 cut(s) 68, 317, 753, 926
NlaIV GGNNCC 3 cut(s) 238, 733, 968
NmuCI GTSAC 3 cut(s) 518, 550, 717
NsiI ATGCAT 1 cut(s) 928
OliI CACNNNNGTG 1 cut(s) 273
PceI AGGCCT 3 cut(s) 28, 93, 130
PfeI GAWTC 2 cut(s) 279, 798
PflMI CCANNNNNTGG 1 cut(s) 204
PkrI GCNGC 4 cut(s) 298, 308, 403, 461
PleI GAGTC 1 cut(s) 110
PpsI GAGTC 1 cut(s) 110
Ppu21I YACGTR 1 cut(s) 638
PpuMI RGGWCCY 1 cut(s) 966
Psp5II RGGWCCY 1 cut(s) 966
Psp6I CCWGG 3 cut(s) 232, 962, 969
PspFI CCCAGC 1 cut(s) 224
PspGI CCWGG 3 cut(s) 232, 962, 969
PspN4I GGNNCC 3 cut(s) 238, 733, 968
PspPI GGNCC 3 cut(s) 237, 732, 966
PspPPI RGGWCCY 1 cut(s) 966
PstNI CAGNNNCTG 1 cut(s) 586
RsaI GTAC 3 cut(s) 601, 640, 908
RsaNI GTAC 3 cut(s) 600, 639, 907
RseI CAYNNNNRTG 3 cut(s) 63, 111, 273
SaqAI TTAA 1 cut(s) 482
SatI GCNGC 4 cut(s) 297, 307, 402, 460
Sau3AI GATC 1 cut(s) 609
Sau96I GGNCC 3 cut(s) 237, 732, 966
SchI GAGTC 1 cut(s) 111
ScrFI CCNGG 5 cut(s) 234, 251, 559, 964, 971
SduI GDGCHC 1 cut(s) 211
SfaNI GCATC 1 cut(s) 10
SinI GGWCC 1 cut(s) 966
SmiMI CAYNNNNRTG 3 cut(s) 63, 111, 273
SmlI CTYRAG 1 cut(s) 499
SmoI CTYRAG 1 cut(s) 499
Sse9I AATT 5 cut(s) 84, 191, 367, 694, 850
SseBI AGGCCT 3 cut(s) 28, 93, 130
SspMI CTAG 3 cut(s) 144, 171, 876
StuI AGGCCT 3 cut(s) 28, 93, 130
StyD4I CCNGG 5 cut(s) 232, 249, 557, 962, 969
StyI CCWWGG 1 cut(s) 749
TaaI ACNGT 5 cut(s) 272, 524, 604, 717, 901
TaiI ACGT 1 cut(s) 640
TasI AATT 5 cut(s) 84, 191, 367, 694, 850
TatI WGTACW 1 cut(s) 906
TfiI GAWTC 2 cut(s) 279, 798
Tru1I TTAA 1 cut(s) 482
Tru9I TTAA 1 cut(s) 482
TscAI CASTG 3 cut(s) 469, 529, 726
TseFI GTSAC 3 cut(s) 518, 550, 717
TseI GCWGC 4 cut(s) 296, 306, 401, 459
Tsp45I GTSAC 3 cut(s) 518, 550, 717
TspDTI ATGAA 3 cut(s) 499, 585, 988
TspRI CASTG 3 cut(s) 469, 529, 726
Van91I CCANNNNNTGG 1 cut(s) 204
VpaK11BI GGWCC 1 cut(s) 966
XapI RAATTY 3 cut(s) 191, 694, 850
XcmI CCANNNNNNNNNTGG 1 cut(s) 620
XspI CTAG 3 cut(s) 144, 171, 876
Zsp2I ATGCAT 1 cut(s) 928
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.