Rmu_sc0000587.1_g000003

carboxylesterase 17

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000587.1
OG0009064
Physical Location & Seq
Reverse (-)
26035 .. 27051
1017 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000587.1_g000003.1.cds

Sequence Viewer

Length: 1017 bp
atggcaaccatttccttcaatccgaggcctaatcttcaagcaactaacaaccatagccatcaacatggagttgttgttgaagaaattgaaggctttatcagagtccacaaaaatggatacatagaaaggcattcaattatccctagtgtcccttgcactactgcaacagctagagatgttgtcattgacaaattctccaacttgtgggcgcgtatttatgttcccagccaccccggggccaataatctcccggtgcttgtttactttcatggtggaggattctgtgttggctctgctgcttggagctgctaccatgagttcctcagcaaccttgcttgtaaagcaagttgtgtcatcgtctctgtaaattaccgtttagcccctgagaaccgtctccctgctgcctatgatgatggtgtcaacgctgttatgtgggtgaaacaagaagctctcagtcagagttgcgagcaaaaatggtggttaagtcggtgcaacctctcgagctttttcataagtggtgacagtgcaggggctaacatagcctacaatgtcaccacccggttatcaaatgaacactcggttttaaaaccattgcgtctcaaaggtactgttctgatccaacctttctttggaggtgaagcacgtacttggtctgaaaaacatgcaactcagccaccacactctgcactaactctatcaaactccgatgtgtattggcgactgtcactgccgttgggggccaaccgagaccatccgtggtgcaatcccttagcaaatggcgtggtaaagttgagggatttgagactcccagctataatggtgtgcgtatcagagttggatatattgaaagacaggaatttggagctgtgcaatgctttgactagcttggggaaaatggtcgaaacagtaacgtacaagggggttgggcatgcatttcaagttctgcataactctcagctctctcatcctaggacccaagaattggtgtctcacatcaaggttttcataaaccagtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009056 GO:0016787
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

338

Amino Acids

37.59

Weight (kDa)

8.65

Isoelectric Point (pI)

36.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 204, 982
AccII CGCG 1 cut(s) 211
AclWI GGATC 1 cut(s) 610
AcsI RAATTY 2 cut(s) 191, 856
AfaI GTAC 3 cut(s) 607, 646, 914
AfiI CCNNNNNNNGG 4 cut(s) 204, 235, 629, 982
AgsI TTSAA 7 cut(s) 19, 38, 80, 89, 135, 847, 938
AluBI AGCT 8 cut(s) 170, 306, 449, 504, 812, 865, 885, 958
AluI AGCT 8 cut(s) 170, 306, 449, 504, 812, 865, 885, 958
Alw26I GTCTC 6 cut(s) 364, 398, 602, 741, 796, 993
AlwI GGATC 1 cut(s) 610
Ama87I CYCGRG 2 cut(s) 233, 499
AoxI GGCC 3 cut(s) 26, 237, 738
ApeKI GCWGC 3 cut(s) 296, 306, 401
ApoI RAATTY 2 cut(s) 191, 856
AspA2I CCTAGG 1 cut(s) 968
AspLEI GCGC 1 cut(s) 211
AspS9I GGNCC 3 cut(s) 237, 738, 972
AsuC2I CCSGG 4 cut(s) 234, 235, 251, 559
AsuHPI GGTGA 4 cut(s) 448, 530, 544, 647
AvaI CYCGRG 2 cut(s) 233, 499
AvaII GGWCC 1 cut(s) 972
AvrII CCTAGG 1 cut(s) 968
BbvCI CCTCAGC 1 cut(s) 323
BbvI GCAGC 3 cut(s) 283, 293, 388
BccI CCATC 3 cut(s) 66, 407, 759
BceAI ACGGC 1 cut(s) 715
BciVI GTATCC 1 cut(s) 110
BcnI CCSGG 4 cut(s) 234, 235, 251, 559
BcoDI GTCTC 6 cut(s) 364, 398, 602, 741, 796, 993
BfaI CTAG 4 cut(s) 144, 171, 882, 969
BfuI GTATCC 1 cut(s) 110
BisI GCNGC 3 cut(s) 297, 307, 402
BlnI CCTAGG 1 cut(s) 968
BlsI GCNGC 3 cut(s) 298, 308, 403
Bme1390I CCNGG 4 cut(s) 234, 235, 251, 559
Bme18I GGWCC 1 cut(s) 972
BmeT110I CYCGRG 2 cut(s) 233, 499
BmgT120I GGNCC 3 cut(s) 237, 738, 972
BmiI GGNNCC 3 cut(s) 238, 739, 974
BmrFI CCNGG 4 cut(s) 234, 235, 251, 559
Bpu10I CCTNAGC 2 cut(s) 323, 769
BpuMI CCSGG 4 cut(s) 234, 235, 251, 559
BsaAI YACGTR 1 cut(s) 644
BsaI GGTCTC 1 cut(s) 741
BsaJI CCNNGG 6 cut(s) 23, 232, 233, 234, 755, 968
BsaXI ACNNNNNCTCC 4 cut(s) 60, 90, 179, 209
Bsc4I CCNNNNNNNGG 4 cut(s) 204, 235, 629, 982
Bse1I ACTGG 1 cut(s) 1012
Bse3DI GCAATG 2 cut(s) 590, 877
BseDI CCNNGG 6 cut(s) 23, 232, 233, 234, 755, 968
BseGI GGATG 2 cut(s) 751, 964
BseLI CCNNNNNNNGG 4 cut(s) 204, 235, 629, 982
BseMI GCAATG 2 cut(s) 590, 877
BseMII CTCAG 5 cut(s) 337, 375, 466, 683, 968
BseNI ACTGG 1 cut(s) 1012
BseXI GCAGC 3 cut(s) 283, 293, 388
BseYI CCCAGC 2 cut(s) 224, 808
BsgI GTGCAG 2 cut(s) 546, 669
Bsh1236I CGCG 1 cut(s) 211
BshFI GGCC 3 cut(s) 28, 239, 740
BsiHKCI CYCGRG 2 cut(s) 233, 499
BsiSI CCGG 3 cut(s) 234, 251, 559
BslFI GGGAC 1 cut(s) 134
BslI CCNNNNNNNGG 4 cut(s) 204, 235, 629, 982
BsmAI GTCTC 6 cut(s) 364, 398, 602, 741, 796, 993
BsmBI CGTCTC 3 cut(s) 364, 398, 602
BsmFI GGGAC 1 cut(s) 134
BsmI GAATGC 1 cut(s) 130
BsnI GGCC 3 cut(s) 28, 239, 740
Bso31I GGTCTC 1 cut(s) 741
BsoBI CYCGRG 2 cut(s) 233, 499
Bsp143I GATC 1 cut(s) 615
BspANI GGCC 3 cut(s) 28, 239, 740
BspCNI CTCAG 5 cut(s) 336, 376, 465, 682, 967
BspFNI CGCG 1 cut(s) 211
BspLI GGNNCC 3 cut(s) 238, 739, 974
BspPI GGATC 1 cut(s) 610
BspTNI GGTCTC 1 cut(s) 741
BsrDI GCAATG 2 cut(s) 590, 877
BsrI ACTGG 1 cut(s) 1012
BssECI CCNNGG 6 cut(s) 23, 232, 233, 234, 755, 968
BssMI GATC 1 cut(s) 615
BssT1I CCWWGG 1 cut(s) 968
Bst4CI ACNGT 6 cut(s) 374, 392, 524, 610, 723, 907
BstBAI YACGTR 1 cut(s) 644
BstC8I GCNNGC 2 cut(s) 467, 930
BstDEI CTNAG 6 cut(s) 323, 384, 452, 669, 769, 954
BstDSI CCRYGG 1 cut(s) 755
BstF5I GGATG 2 cut(s) 751, 964
BstFNI CGCG 1 cut(s) 211
BstHHI GCGC 1 cut(s) 211
BstKTI GATC 1 cut(s) 618
BstMAI GTCTC 6 cut(s) 364, 398, 602, 741, 796, 993
BstMBI GATC 1 cut(s) 615
BstMWI GCNNNNNNNGC 2 cut(s) 341, 539
BstNSI RCATGY 2 cut(s) 665, 932
BstSCI CCNGG 4 cut(s) 232, 233, 249, 557
BstUI CGCG 1 cut(s) 211
BstV1I GCAGC 3 cut(s) 283, 293, 388
BstXI CCANNNNNNTGG 2 cut(s) 65, 113
BsuI GTATCC 1 cut(s) 110
BsuRI GGCC 3 cut(s) 28, 239, 740
BtgI CCRYGG 1 cut(s) 755
BtsCI GGATG 2 cut(s) 751, 964
BtsI GCAGTG 1 cut(s) 725
BtsIMutI CAGTG 2 cut(s) 529, 725
Cac8I GCNNGC 2 cut(s) 467, 930
CfoI GCGC 1 cut(s) 211
Cfr13I GGNCC 3 cut(s) 237, 738, 972
Cfr9I CCCGGG 1 cut(s) 233
CseI GACGC 1 cut(s) 584
Csp6I GTAC 3 cut(s) 606, 645, 913
CspCI CAANNNNNGTGG 4 cut(s) 458, 493, 762, 797
CviAII CATG 5 cut(s) 65, 269, 314, 662, 929
CviQI GTAC 3 cut(s) 606, 645, 913
DdeI CTNAG 6 cut(s) 323, 384, 452, 669, 769, 954
DpnI GATC 1 cut(s) 617
DpnII GATC 1 cut(s) 615
DraI TTTAAA 1 cut(s) 585
Eco130I CCWWGG 1 cut(s) 968
Eco147I AGGCCT 1 cut(s) 28
Eco31I GGTCTC 1 cut(s) 741
Eco47I GGWCC 1 cut(s) 972
Eco88I CYCGRG 2 cut(s) 233, 499
EcoO109I RGGNCCY 1 cut(s) 972
EcoT14I CCWWGG 1 cut(s) 968
EcoT22I ATGCAT 1 cut(s) 934
ErhI CCWWGG 1 cut(s) 968
Esp3I CGTCTC 3 cut(s) 364, 398, 602
FaeI CATG 5 cut(s) 68, 272, 317, 665, 932
FaqI GGGAC 1 cut(s) 134
FatI CATG 5 cut(s) 64, 268, 313, 661, 928
Fnu4HI GCNGC 3 cut(s) 297, 307, 402
FokI GGATG 2 cut(s) 738, 951
Fsp4HI GCNGC 3 cut(s) 297, 307, 402
FspBI CTAG 4 cut(s) 144, 171, 882, 969
GlaI GCGC 1 cut(s) 210
GluI GCNGC 3 cut(s) 297, 307, 402
GsaI CCCAGC 2 cut(s) 228, 812
HaeIII GGCC 3 cut(s) 28, 239, 740
HapII CCGG 3 cut(s) 234, 251, 559
HgaI GACGC 1 cut(s) 584
HhaI GCGC 1 cut(s) 211
Hin1II CATG 5 cut(s) 68, 272, 317, 665, 932
Hin6I GCGC 1 cut(s) 209
HinP1I GCGC 1 cut(s) 209
HincII GTYRAC 1 cut(s) 421
HindII GTYRAC 1 cut(s) 421
HinfI GANTC 3 cut(s) 102, 279, 804
HpaII CCGG 3 cut(s) 234, 251, 559
HphI GGTGA 4 cut(s) 448, 530, 544, 647
Hpy166II GTNNAC 3 cut(s) 106, 262, 421
Hpy188I TCNGA 7 cut(s) 24, 101, 459, 615, 655, 706, 832
Hpy188III TCNNGA 1 cut(s) 499
Hpy8I GTNNAC 3 cut(s) 106, 262, 421
HpyAV CCTTC 2 cut(s) 25, 83
HpyCH4III ACNGT 6 cut(s) 374, 392, 524, 610, 723, 907
HpyCH4IV ACGT 2 cut(s) 643, 911
HpyF10VI GCNNNNNNNGC 2 cut(s) 341, 539
HpyF3I CTNAG 6 cut(s) 323, 384, 452, 669, 769, 954
HpySE526I ACGT 2 cut(s) 643, 911
Hsp92II CATG 5 cut(s) 68, 272, 317, 665, 932
HspAI GCGC 1 cut(s) 209
Kzo9I GATC 1 cut(s) 615
LmnI GCTCC 2 cut(s) 303, 862
LpnPI CCDG 9 cut(s) 238, 247, 264, 396, 411, 513, 572, 822, 838
Lsp1109I GCAGC 3 cut(s) 283, 293, 388
MaeI CTAG 4 cut(s) 144, 171, 882, 969
MaeII ACGT 2 cut(s) 643, 911
MaeIII GTNAC 4 cut(s) 518, 550, 723, 907
MalI GATC 1 cut(s) 617
MboI GATC 1 cut(s) 615
MboII GAAGA 2 cut(s) 26, 92
MluCI AATT 6 cut(s) 84, 135, 191, 367, 856, 980
MlyI GAGTC 2 cut(s) 111, 798
MmeI TCCRAC 3 cut(s) 222, 643, 816
MnlI CCTC 6 cut(s) 18, 269, 332, 506, 626, 786
Mph1103I ATGCAT 1 cut(s) 934
MseI TTAA 2 cut(s) 482, 584
MslI CAYNNNNRTG 2 cut(s) 63, 111
MspI CCGG 3 cut(s) 234, 251, 559
MspR9I CCNGG 4 cut(s) 234, 235, 251, 559
Mva1269I GAATGC 1 cut(s) 130
MvnI CGCG 1 cut(s) 211
MwoI GCNNNNNNNGC 2 cut(s) 341, 539
NciI CCSGG 4 cut(s) 234, 235, 251, 559
NdeII GATC 1 cut(s) 615
NlaIII CATG 5 cut(s) 68, 272, 317, 665, 932
NlaIV GGNNCC 3 cut(s) 238, 739, 974
NmuCI GTSAC 3 cut(s) 518, 550, 723
NsiI ATGCAT 1 cut(s) 934
NspI RCATGY 2 cut(s) 665, 932
PaeI GCATGC 1 cut(s) 932
PaeR7I CTCGAG 1 cut(s) 499
PceI AGGCCT 1 cut(s) 28
PctI GAATGC 1 cut(s) 130
PfeI GAWTC 1 cut(s) 279
PflMI CCANNNNNTGG 2 cut(s) 204, 982
PkrI GCNGC 3 cut(s) 298, 308, 403
PleI GAGTC 2 cut(s) 110, 798
PpsI GAGTC 2 cut(s) 110, 798
Ppu21I YACGTR 1 cut(s) 644
PpuMI RGGWCCY 1 cut(s) 972
Psp5II RGGWCCY 1 cut(s) 972
PspFI CCCAGC 2 cut(s) 224, 808
PspN4I GGNNCC 3 cut(s) 238, 739, 974
PspPI GGNCC 3 cut(s) 237, 738, 972
PspPPI RGGWCCY 1 cut(s) 972
RsaI GTAC 3 cut(s) 607, 646, 914
RsaNI GTAC 3 cut(s) 606, 645, 913
RseI CAYNNNNRTG 2 cut(s) 63, 111
SaqAI TTAA 2 cut(s) 482, 584
SatI GCNGC 3 cut(s) 297, 307, 402
Sau3AI GATC 1 cut(s) 615
Sau96I GGNCC 3 cut(s) 237, 738, 972
SchI GAGTC 2 cut(s) 111, 798
ScrFI CCNGG 4 cut(s) 234, 235, 251, 559
Sfr274I CTCGAG 1 cut(s) 499
SinI GGWCC 1 cut(s) 972
SlaI CTCGAG 1 cut(s) 499
SmaI CCCGGG 1 cut(s) 235
SmiMI CAYNNNNRTG 2 cut(s) 63, 111
SmlI CTYRAG 1 cut(s) 499
SmoI CTYRAG 1 cut(s) 499
SphI GCATGC 1 cut(s) 932
Sse9I AATT 6 cut(s) 84, 135, 191, 367, 856, 980
SseBI AGGCCT 1 cut(s) 28
SspMI CTAG 4 cut(s) 144, 171, 882, 969
StuI AGGCCT 1 cut(s) 28
StyD4I CCNGG 4 cut(s) 232, 233, 249, 557
StyI CCWWGG 1 cut(s) 968
TaaI ACNGT 6 cut(s) 374, 392, 524, 610, 723, 907
TaiI ACGT 2 cut(s) 646, 914
TaqI TCGA 2 cut(s) 500, 900
TasI AATT 6 cut(s) 84, 135, 191, 367, 856, 980
TfiI GAWTC 1 cut(s) 279
Tru1I TTAA 2 cut(s) 482, 584
Tru9I TTAA 2 cut(s) 482, 584
TscAI CASTG 2 cut(s) 529, 732
TseFI GTSAC 3 cut(s) 518, 550, 723
TseI GCWGC 3 cut(s) 296, 306, 401
Tsp45I GTSAC 3 cut(s) 518, 550, 723
TspDTI ATGAA 4 cut(s) 257, 499, 585, 994
TspGWI ACGGA 1 cut(s) 744
TspMI CCCGGG 1 cut(s) 233
TspRI CASTG 2 cut(s) 529, 732
Van91I CCANNNNNTGG 2 cut(s) 204, 982
VpaK11BI GGWCC 1 cut(s) 972
XapI RAATTY 2 cut(s) 191, 856
XceI RCATGY 2 cut(s) 665, 932
XcmI CCANNNNNNNNNTGG 1 cut(s) 626
XhoI CTCGAG 1 cut(s) 499
XmaI CCCGGG 1 cut(s) 233
XmaJI CCTAGG 1 cut(s) 968
XspI CTAG 4 cut(s) 144, 171, 882, 969
Zsp2I ATGCAT 1 cut(s) 934
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.