Rh2DG588500

carboxylesterase 17

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0009064
Physical Location & Seq
Reverse (-)
82128793 .. 82152639
23847 bp
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UTR
Exon/CDS
Intron
Rh2DG588500.1

Sequence Viewer

Length: 375 bp
ATGCTAGCGAGAAAGGAATCACCAACTCATCCACCACACTCTGCACTAACTCTGTCAAACTCCGATGTGTATTGGCGACTGTCACTGCCGTTGGGGGCCAACCGAGACCATCCGTGGTGCAATCCCTTAGCAAATGGCGTGGCAAAGTTGAGGGATTTGAGACTCCCAGCTATGATGGTGTGCGTATCAGGGTTGGATATATTGAAAGACAAGAATTTGGAGCTGTGCAATGCTTTGACTAGCTTGGGGAAAAAGGTCGAAACAGTAACGTACAAAGGGGTTGGGCATGCATTTCAAGTTCTGCATAACTCTCAGCTCTCTCATCCTAGGACCCAAGAATTGGTGTCTCACATCAAGGTTTTCATAAACCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009056 GO:0016787
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

124

Amino Acids

13.8

Weight (kDa)

9.37

Isoelectric Point (pI)

19.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_3 PF07859 13 - 99 2.2e-17 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 340
AcsI RAATTY 1 cut(s) 214
AfaI GTAC 1 cut(s) 272
AfiI CCNNNNNNNGG 1 cut(s) 340
AgsI TTSAA 2 cut(s) 205, 296
AluBI AGCT 4 cut(s) 170, 223, 243, 316
AluI AGCT 4 cut(s) 170, 223, 243, 316
Alw26I GTCTC 3 cut(s) 99, 154, 351
AoxI GGCC 1 cut(s) 96
ApoI RAATTY 1 cut(s) 214
AspA2I CCTAGG 1 cut(s) 326
AspS9I GGNCC 2 cut(s) 96, 330
AsuHPI GGTGA 1 cut(s) 12
AsuNHI GCTAGC 1 cut(s) 4
AvaII GGWCC 1 cut(s) 330
AvrII CCTAGG 1 cut(s) 326
BccI CCATC 2 cut(s) 117, 169
BceAI ACGGC 1 cut(s) 73
BcoDI GTCTC 3 cut(s) 99, 154, 351
BfaI CTAG 3 cut(s) 5, 240, 327
BlnI CCTAGG 1 cut(s) 326
Bme18I GGWCC 1 cut(s) 330
BmgT120I GGNCC 2 cut(s) 96, 330
BmiI GGNNCC 2 cut(s) 97, 332
BmtI GCTAGC 1 cut(s) 8
Bpu10I CCTNAGC 1 cut(s) 127
BsaI GGTCTC 1 cut(s) 99
BsaJI CCNNGG 2 cut(s) 113, 326
Bsc4I CCNNNNNNNGG 1 cut(s) 340
Bse1I ACTGG 1 cut(s) 370
Bse3DI GCAATG 1 cut(s) 235
BseDI CCNNGG 2 cut(s) 113, 326
BseGI GGATG 3 cut(s) 28, 109, 322
BseLI CCNNNNNNNGG 1 cut(s) 340
BseMI GCAATG 1 cut(s) 235
BseMII CTCAG 1 cut(s) 326
BseNI ACTGG 1 cut(s) 370
BseYI CCCAGC 1 cut(s) 166
BsgI GTGCAG 1 cut(s) 27
BshFI GGCC 1 cut(s) 98
BslI CCNNNNNNNGG 1 cut(s) 340
BsmAI GTCTC 3 cut(s) 99, 154, 351
BsnI GGCC 1 cut(s) 98
Bso31I GGTCTC 1 cut(s) 99
BspANI GGCC 1 cut(s) 98
BspCNI CTCAG 1 cut(s) 325
BspLI GGNNCC 2 cut(s) 97, 332
BspOI GCTAGC 1 cut(s) 8
BspTNI GGTCTC 1 cut(s) 99
BsrDI GCAATG 1 cut(s) 235
BsrI ACTGG 1 cut(s) 370
BssECI CCNNGG 2 cut(s) 113, 326
BssT1I CCWWGG 1 cut(s) 326
Bst4CI ACNGT 2 cut(s) 81, 265
BstC8I GCNNGC 2 cut(s) 6, 288
BstDEI CTNAG 2 cut(s) 127, 312
BstDSI CCRYGG 1 cut(s) 113
BstF5I GGATG 3 cut(s) 28, 109, 322
BstMAI GTCTC 3 cut(s) 99, 154, 351
BstNSI RCATGY 1 cut(s) 290
BsuRI GGCC 1 cut(s) 98
BtgI CCRYGG 1 cut(s) 113
BtsCI GGATG 3 cut(s) 28, 109, 322
BtsI GCAGTG 1 cut(s) 83
BtsIMutI CAGTG 1 cut(s) 83
Cac8I GCNNGC 2 cut(s) 6, 288
Cfr13I GGNCC 2 cut(s) 96, 330
Csp6I GTAC 1 cut(s) 271
CspCI CAANNNNNGTGG 2 cut(s) 120, 155
CviAII CATG 1 cut(s) 287
CviJI RGCY 5 cut(s) 98, 170, 223, 243, 316
CviKI_1 RGCY 5 cut(s) 98, 170, 223, 243, 316
CviQI GTAC 1 cut(s) 271
DdeI CTNAG 2 cut(s) 127, 312
Eco130I CCWWGG 1 cut(s) 326
Eco31I GGTCTC 1 cut(s) 99
Eco47I GGWCC 1 cut(s) 330
EcoO109I RGGNCCY 1 cut(s) 330
EcoT14I CCWWGG 1 cut(s) 326
EcoT22I ATGCAT 1 cut(s) 292
ErhI CCWWGG 1 cut(s) 326
FaeI CATG 1 cut(s) 290
FaiI YATR 5 cut(s) 173, 200, 288, 306, 365
FatI CATG 1 cut(s) 286
FokI GGATG 3 cut(s) 15, 96, 309
FspBI CTAG 3 cut(s) 5, 240, 327
GsaI CCCAGC 1 cut(s) 170
HaeIII GGCC 1 cut(s) 98
Hin1II CATG 1 cut(s) 290
HinfI GANTC 2 cut(s) 17, 162
HphI GGTGA 1 cut(s) 12
Hpy188I TCNGA 1 cut(s) 64
HpyCH4III ACNGT 2 cut(s) 81, 265
HpyCH4IV ACGT 1 cut(s) 269
HpyCH4V TGCA 5 cut(s) 44, 120, 228, 290, 304
HpyF3I CTNAG 2 cut(s) 127, 312
HpySE526I ACGT 1 cut(s) 269
Hsp92II CATG 1 cut(s) 290
LmnI GCTCC 1 cut(s) 220
LpnPI CCDG 2 cut(s) 174, 180
MaeI CTAG 3 cut(s) 5, 240, 327
MaeII ACGT 1 cut(s) 269
MaeIII GTNAC 2 cut(s) 81, 265
MluCI AATT 2 cut(s) 214, 338
MlyI GAGTC 1 cut(s) 156
MmeI TCCRAC 1 cut(s) 174
MnlI CCTC 1 cut(s) 144
Mph1103I ATGCAT 1 cut(s) 292
NheI GCTAGC 1 cut(s) 4
NlaIII CATG 1 cut(s) 290
NlaIV GGNNCC 2 cut(s) 97, 332
NmuCI GTSAC 1 cut(s) 81
NsiI ATGCAT 1 cut(s) 292
NspI RCATGY 1 cut(s) 290
PaeI GCATGC 1 cut(s) 290
PfeI GAWTC 1 cut(s) 17
PflMI CCANNNNNTGG 1 cut(s) 340
PleI GAGTC 1 cut(s) 156
PpsI GAGTC 1 cut(s) 156
PpuMI RGGWCCY 1 cut(s) 330
Psp5II RGGWCCY 1 cut(s) 330
PspFI CCCAGC 1 cut(s) 166
PspN4I GGNNCC 2 cut(s) 97, 332
PspPI GGNCC 2 cut(s) 96, 330
PspPPI RGGWCCY 1 cut(s) 330
RsaI GTAC 1 cut(s) 272
RsaNI GTAC 1 cut(s) 271
Sau96I GGNCC 2 cut(s) 96, 330
SchI GAGTC 1 cut(s) 156
SetI ASST 7 cut(s) 172, 225, 245, 258, 272, 318, 360
SinI GGWCC 1 cut(s) 330
SphI GCATGC 1 cut(s) 290
Sse9I AATT 2 cut(s) 214, 338
SspMI CTAG 3 cut(s) 5, 240, 327
StyI CCWWGG 1 cut(s) 326
TaaI ACNGT 2 cut(s) 81, 265
TaiI ACGT 1 cut(s) 272
TaqI TCGA 1 cut(s) 258
TasI AATT 2 cut(s) 214, 338
TfiI GAWTC 1 cut(s) 17
TscAI CASTG 1 cut(s) 90
TseFI GTSAC 1 cut(s) 81
Tsp45I GTSAC 1 cut(s) 81
TspDTI ATGAA 1 cut(s) 352
TspGWI ACGGA 1 cut(s) 102
TspRI CASTG 1 cut(s) 90
Van91I CCANNNNNTGG 1 cut(s) 340
VpaK11BI GGWCC 1 cut(s) 330
XapI RAATTY 1 cut(s) 214
XceI RCATGY 1 cut(s) 290
XmaJI CCTAGG 1 cut(s) 326
XspI CTAG 3 cut(s) 5, 240, 327
Zsp2I ATGCAT 1 cut(s) 292
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.