Rw2G046830

carboxylesterase 17

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0009064
Physical Location & Seq
Reverse (-)
74219661 .. 74220760
1100 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G046830.1

Sequence Viewer

Length: 1035 bp
ATGCGATTTAGAAGATCAATGGCAACCATTTCCTTCAATCCGAGGCCTAATCTTCAAGCAACTAACAACCATAGCCATCAACATGGAGTTGTTGTTGAAGAAATTGAAGGCTTTATCAGAGTCCACAAAAATGGATACATAGAAAGGCATTCAATTATCCCTAGTGTCCCTTGCACTACTGCAACAGCTAGAGATGTTGTCATTGACAAATTCTCCAACTTGTGGGCGCGTATTTATGTTCCCAGCCACCCAGGGGCCAATAATCTCCCGGTGCTTCTTTACTTTCATGGTGGAGGATTCTGTGTTGGCTCTGCTGCTTGGAGCTGCTACCATGAGTTCCTCAGCAACCTTGCTTGTAAAGCAAGTTGTGTCATCGTCTCTGTAAATTACCGTTTAGCCCCTGAGAACCGTCTCCCTGCTGCCTATGATGATGGTGTCAACGCTGTTATGTGGGTGAAACAACAAGCTCTCAGTCAGAGTTGCGAGCAAAAATGGTGGTTAAGTCGGTGCAACCTCTCGAGCTTTTTCATAAGTGGTGACAGTGCAGGGGCTAACATAGCCTACAATGTCACCACCCGGTTATCAAATGAACACTCGGTTTTAAAACCATTGCGTCTCAAAGGTACTGTTCTGATCCAACCTTTCTTTGGAGGTGAAGCACGTACTTGGTCTGAAAAACATGCAACTCAGCCACCACACTCTGCACTAACTCTATCAAACTCCGATGTGTATTGGCGACTGTCACTGCCGTTGGGGGCCAACCGAGACCATCCGTGGTGCAATCCCTTAGCAAATGGCTTGGCAAAGTTGAGGGATTTGAGACTCCCAGCTATAATGGTGTGCGTATCAGAGTTGGATATATTGAAAGACAGGAATTTGGAGCTGTGCAATGTTTTGACTAGCTTGGGGAAAATGGTCGAAACAGTAACGTACAAGGGGGTTGGGCATGCATTTCAAGTTCTGCATAACTCTCAGTTCTCTCATCCTAGGACCCAAGAATTGGTGTCTCACATCAAGGTTTTCATAAACCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009056 GO:0016787
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

344

Amino Acids

38.48

Weight (kDa)

9.1

Isoelectric Point (pI)

38.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BD-FAE PF20434 78 - 191 7.6e-12 BD-FAE
COesterase PF00135 78 - 134 5.5e-09 Carboxylesterase family
Abhydrolase_3 PF07859 92 - 319 1.3e-58 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 222, 1000
AccII CGCG 1 cut(s) 229
AclWI GGATC 1 cut(s) 628
AcsI RAATTY 2 cut(s) 209, 874
AfaI GTAC 3 cut(s) 625, 664, 932
AfiI CCNNNNNNNGG 4 cut(s) 222, 253, 647, 1000
AgsI TTSAA 7 cut(s) 37, 56, 98, 107, 153, 865, 956
AjnI CCWGG 1 cut(s) 250
AluBI AGCT 7 cut(s) 188, 324, 467, 522, 830, 883, 903
AluI AGCT 7 cut(s) 188, 324, 467, 522, 830, 883, 903
Alw26I GTCTC 6 cut(s) 382, 416, 620, 759, 814, 1011
AlwI GGATC 1 cut(s) 628
Ama87I CYCGRG 1 cut(s) 517
AoxI GGCC 3 cut(s) 44, 255, 756
ApeKI GCWGC 3 cut(s) 314, 324, 419
ApoI RAATTY 2 cut(s) 209, 874
AspA2I CCTAGG 1 cut(s) 986
AspLEI GCGC 1 cut(s) 229
AspS9I GGNCC 3 cut(s) 255, 756, 990
AsuC2I CCSGG 2 cut(s) 269, 577
AsuHPI GGTGA 4 cut(s) 466, 548, 562, 665
AvaI CYCGRG 1 cut(s) 517
AvaII GGWCC 1 cut(s) 990
AvrII CCTAGG 1 cut(s) 986
BbvCI CCTCAGC 1 cut(s) 341
BbvI GCAGC 3 cut(s) 301, 311, 406
BccI CCATC 3 cut(s) 84, 425, 777
BceAI ACGGC 1 cut(s) 733
BciT130I CCWGG 1 cut(s) 252
BciVI GTATCC 1 cut(s) 128
BcnI CCSGG 2 cut(s) 269, 577
BcoDI GTCTC 6 cut(s) 382, 416, 620, 759, 814, 1011
BfaI CTAG 4 cut(s) 162, 189, 900, 987
BfuI GTATCC 1 cut(s) 128
BisI GCNGC 3 cut(s) 315, 325, 420
BlnI CCTAGG 1 cut(s) 986
BlsI GCNGC 3 cut(s) 316, 326, 421
Bme1390I CCNGG 3 cut(s) 252, 269, 577
Bme18I GGWCC 1 cut(s) 990
BmeT110I CYCGRG 1 cut(s) 517
BmgT120I GGNCC 3 cut(s) 255, 756, 990
BmiI GGNNCC 3 cut(s) 256, 757, 992
BmrFI CCNGG 3 cut(s) 252, 269, 577
Bpu10I CCTNAGC 2 cut(s) 341, 787
BpuMI CCSGG 2 cut(s) 269, 577
BsaAI YACGTR 1 cut(s) 662
BsaI GGTCTC 1 cut(s) 759
BsaJI CCNNGG 5 cut(s) 41, 250, 251, 773, 986
BsaXI ACNNNNNCTCC 4 cut(s) 78, 108, 197, 227
Bsc4I CCNNNNNNNGG 4 cut(s) 222, 253, 647, 1000
Bse1I ACTGG 1 cut(s) 1030
Bse3DI GCAATG 2 cut(s) 608, 895
BseBI CCWGG 1 cut(s) 252
BseDI CCNNGG 5 cut(s) 41, 250, 251, 773, 986
BseGI GGATG 2 cut(s) 769, 982
BseLI CCNNNNNNNGG 4 cut(s) 222, 253, 647, 1000
BseMI GCAATG 2 cut(s) 608, 895
BseMII CTCAG 5 cut(s) 355, 393, 484, 701, 986
BseNI ACTGG 1 cut(s) 1030
BseXI GCAGC 3 cut(s) 301, 311, 406
BseYI CCCAGC 2 cut(s) 242, 826
BsgI GTGCAG 2 cut(s) 564, 687
Bsh1236I CGCG 1 cut(s) 229
BshFI GGCC 3 cut(s) 46, 257, 758
BsiHKCI CYCGRG 1 cut(s) 517
BsiSI CCGG 2 cut(s) 269, 577
BslFI GGGAC 1 cut(s) 152
BslI CCNNNNNNNGG 4 cut(s) 222, 253, 647, 1000
BsmAI GTCTC 6 cut(s) 382, 416, 620, 759, 814, 1011
BsmBI CGTCTC 3 cut(s) 382, 416, 620
BsmFI GGGAC 1 cut(s) 152
BsmI GAATGC 1 cut(s) 148
BsnI GGCC 3 cut(s) 46, 257, 758
Bso31I GGTCTC 1 cut(s) 759
BsoBI CYCGRG 1 cut(s) 517
Bsp143I GATC 2 cut(s) 14, 633
BspANI GGCC 3 cut(s) 46, 257, 758
BspCNI CTCAG 5 cut(s) 354, 394, 483, 700, 985
BspFNI CGCG 1 cut(s) 229
BspLI GGNNCC 3 cut(s) 256, 757, 992
BspPI GGATC 1 cut(s) 628
BspTNI GGTCTC 1 cut(s) 759
BsrDI GCAATG 2 cut(s) 608, 895
BsrI ACTGG 1 cut(s) 1030
BssECI CCNNGG 5 cut(s) 41, 250, 251, 773, 986
BssMI GATC 2 cut(s) 14, 633
BssT1I CCWWGG 1 cut(s) 986
Bst2UI CCWGG 1 cut(s) 252
Bst4CI ACNGT 6 cut(s) 392, 410, 542, 628, 741, 925
BstBAI YACGTR 1 cut(s) 662
BstC8I GCNNGC 2 cut(s) 485, 948
BstDEI CTNAG 6 cut(s) 341, 402, 470, 687, 787, 972
BstDSI CCRYGG 1 cut(s) 773
BstF5I GGATG 2 cut(s) 769, 982
BstFNI CGCG 1 cut(s) 229
BstHHI GCGC 1 cut(s) 229
BstKTI GATC 2 cut(s) 17, 636
BstMAI GTCTC 6 cut(s) 382, 416, 620, 759, 814, 1011
BstMBI GATC 2 cut(s) 14, 633
BstMWI GCNNNNNNNGC 2 cut(s) 359, 557
BstNI CCWGG 1 cut(s) 252
BstNSI RCATGY 2 cut(s) 683, 950
BstSCI CCNGG 3 cut(s) 250, 267, 575
BstUI CGCG 1 cut(s) 229
BstV1I GCAGC 3 cut(s) 301, 311, 406
BstXI CCANNNNNNTGG 2 cut(s) 83, 131
BsuI GTATCC 1 cut(s) 128
BsuRI GGCC 3 cut(s) 46, 257, 758
BtgI CCRYGG 1 cut(s) 773
BtsCI GGATG 2 cut(s) 769, 982
BtsI GCAGTG 1 cut(s) 743
BtsIMutI CAGTG 2 cut(s) 547, 743
Cac8I GCNNGC 2 cut(s) 485, 948
CfoI GCGC 1 cut(s) 229
Cfr13I GGNCC 3 cut(s) 255, 756, 990
CseI GACGC 1 cut(s) 602
Csp6I GTAC 3 cut(s) 624, 663, 931
CspCI CAANNNNNGTGG 2 cut(s) 476, 511
CviAII CATG 5 cut(s) 83, 287, 332, 680, 947
CviQI GTAC 3 cut(s) 624, 663, 931
DdeI CTNAG 6 cut(s) 341, 402, 470, 687, 787, 972
DpnI GATC 2 cut(s) 16, 635
DpnII GATC 2 cut(s) 14, 633
DraI TTTAAA 1 cut(s) 603
Eco130I CCWWGG 1 cut(s) 986
Eco147I AGGCCT 1 cut(s) 46
Eco31I GGTCTC 1 cut(s) 759
Eco47I GGWCC 1 cut(s) 990
Eco88I CYCGRG 1 cut(s) 517
EcoO109I RGGNCCY 1 cut(s) 990
EcoRII CCWGG 1 cut(s) 250
EcoT14I CCWWGG 1 cut(s) 986
EcoT22I ATGCAT 1 cut(s) 952
ErhI CCWWGG 1 cut(s) 986
Esp3I CGTCTC 3 cut(s) 382, 416, 620
FaeI CATG 5 cut(s) 86, 290, 335, 683, 950
FaqI GGGAC 1 cut(s) 152
FatI CATG 5 cut(s) 82, 286, 331, 679, 946
Fnu4HI GCNGC 3 cut(s) 315, 325, 420
FokI GGATG 2 cut(s) 756, 969
Fsp4HI GCNGC 3 cut(s) 315, 325, 420
FspBI CTAG 4 cut(s) 162, 189, 900, 987
GlaI GCGC 1 cut(s) 228
GluI GCNGC 3 cut(s) 315, 325, 420
GsaI CCCAGC 2 cut(s) 246, 830
HaeIII GGCC 3 cut(s) 46, 257, 758
HapII CCGG 2 cut(s) 269, 577
HgaI GACGC 1 cut(s) 602
HhaI GCGC 1 cut(s) 229
Hin1II CATG 5 cut(s) 86, 290, 335, 683, 950
Hin6I GCGC 1 cut(s) 227
HinP1I GCGC 1 cut(s) 227
HincII GTYRAC 1 cut(s) 439
HindII GTYRAC 1 cut(s) 439
HinfI GANTC 3 cut(s) 120, 297, 822
HpaII CCGG 2 cut(s) 269, 577
HphI GGTGA 4 cut(s) 466, 548, 562, 665
Hpy166II GTNNAC 2 cut(s) 124, 439
Hpy188I TCNGA 7 cut(s) 42, 119, 477, 633, 673, 724, 850
Hpy188III TCNNGA 1 cut(s) 517
Hpy8I GTNNAC 2 cut(s) 124, 439
HpyAV CCTTC 2 cut(s) 43, 101
HpyCH4III ACNGT 6 cut(s) 392, 410, 542, 628, 741, 925
HpyCH4IV ACGT 2 cut(s) 661, 929
HpyF10VI GCNNNNNNNGC 2 cut(s) 359, 557
HpyF3I CTNAG 6 cut(s) 341, 402, 470, 687, 787, 972
HpySE526I ACGT 2 cut(s) 661, 929
Hsp92II CATG 5 cut(s) 86, 290, 335, 683, 950
HspAI GCGC 1 cut(s) 227
Kzo9I GATC 2 cut(s) 14, 633
LmnI GCTCC 2 cut(s) 321, 880
Lsp1109I GCAGC 3 cut(s) 301, 311, 406
MaeI CTAG 4 cut(s) 162, 189, 900, 987
MaeII ACGT 2 cut(s) 661, 929
MaeIII GTNAC 4 cut(s) 536, 568, 741, 925
MalI GATC 2 cut(s) 16, 635
MboI GATC 2 cut(s) 14, 633
MboII GAAGA 3 cut(s) 24, 44, 110
MluCI AATT 6 cut(s) 102, 153, 209, 385, 874, 998
MlyI GAGTC 2 cut(s) 129, 816
MmeI TCCRAC 3 cut(s) 240, 661, 834
MnlI CCTC 6 cut(s) 36, 287, 350, 524, 644, 804
Mph1103I ATGCAT 1 cut(s) 952
MseI TTAA 2 cut(s) 500, 602
MslI CAYNNNNRTG 2 cut(s) 81, 129
MspI CCGG 2 cut(s) 269, 577
MspR9I CCNGG 3 cut(s) 252, 269, 577
Mva1269I GAATGC 1 cut(s) 148
MvaI CCWGG 1 cut(s) 252
MvnI CGCG 1 cut(s) 229
MwoI GCNNNNNNNGC 2 cut(s) 359, 557
NciI CCSGG 2 cut(s) 269, 577
NdeII GATC 2 cut(s) 14, 633
NlaIII CATG 5 cut(s) 86, 290, 335, 683, 950
NlaIV GGNNCC 3 cut(s) 256, 757, 992
NmuCI GTSAC 3 cut(s) 536, 568, 741
NsiI ATGCAT 1 cut(s) 952
NspI RCATGY 2 cut(s) 683, 950
PaeI GCATGC 1 cut(s) 950
PaeR7I CTCGAG 1 cut(s) 517
PasI CCCWGGG 1 cut(s) 251
PceI AGGCCT 1 cut(s) 46
PctI GAATGC 1 cut(s) 148
PfeI GAWTC 1 cut(s) 297
PflMI CCANNNNNTGG 2 cut(s) 222, 1000
PkrI GCNGC 3 cut(s) 316, 326, 421
PleI GAGTC 2 cut(s) 128, 816
PpsI GAGTC 2 cut(s) 128, 816
Ppu21I YACGTR 1 cut(s) 662
PpuMI RGGWCCY 1 cut(s) 990
Psp5II RGGWCCY 1 cut(s) 990
Psp6I CCWGG 1 cut(s) 250
PspFI CCCAGC 2 cut(s) 242, 826
PspGI CCWGG 1 cut(s) 250
PspN4I GGNNCC 3 cut(s) 256, 757, 992
PspPI GGNCC 3 cut(s) 255, 756, 990
PspPPI RGGWCCY 1 cut(s) 990
RsaI GTAC 3 cut(s) 625, 664, 932
RsaNI GTAC 3 cut(s) 624, 663, 931
RseI CAYNNNNRTG 2 cut(s) 81, 129
SaqAI TTAA 2 cut(s) 500, 602
SatI GCNGC 3 cut(s) 315, 325, 420
Sau3AI GATC 2 cut(s) 14, 633
Sau96I GGNCC 3 cut(s) 255, 756, 990
SchI GAGTC 2 cut(s) 129, 816
ScrFI CCNGG 3 cut(s) 252, 269, 577
Sfr274I CTCGAG 1 cut(s) 517
SinI GGWCC 1 cut(s) 990
SlaI CTCGAG 1 cut(s) 517
SmiMI CAYNNNNRTG 2 cut(s) 81, 129
SmlI CTYRAG 1 cut(s) 517
SmoI CTYRAG 1 cut(s) 517
SphI GCATGC 1 cut(s) 950
Sse9I AATT 6 cut(s) 102, 153, 209, 385, 874, 998
SseBI AGGCCT 1 cut(s) 46
SspMI CTAG 4 cut(s) 162, 189, 900, 987
StuI AGGCCT 1 cut(s) 46
StyD4I CCNGG 3 cut(s) 250, 267, 575
StyI CCWWGG 1 cut(s) 986
TaaI ACNGT 6 cut(s) 392, 410, 542, 628, 741, 925
TaiI ACGT 2 cut(s) 664, 932
TaqI TCGA 2 cut(s) 518, 918
TasI AATT 6 cut(s) 102, 153, 209, 385, 874, 998
TfiI GAWTC 1 cut(s) 297
Tru1I TTAA 2 cut(s) 500, 602
Tru9I TTAA 2 cut(s) 500, 602
TscAI CASTG 2 cut(s) 547, 750
TseFI GTSAC 3 cut(s) 536, 568, 741
TseI GCWGC 3 cut(s) 314, 324, 419
Tsp45I GTSAC 3 cut(s) 536, 568, 741
TspDTI ATGAA 4 cut(s) 275, 517, 603, 1012
TspGWI ACGGA 1 cut(s) 762
TspRI CASTG 2 cut(s) 547, 750
Van91I CCANNNNNTGG 2 cut(s) 222, 1000
VpaK11BI GGWCC 1 cut(s) 990
XapI RAATTY 2 cut(s) 209, 874
XceI RCATGY 2 cut(s) 683, 950
XcmI CCANNNNNNNNNTGG 1 cut(s) 644
XhoI CTCGAG 1 cut(s) 517
XmaJI CCTAGG 1 cut(s) 986
XspI CTAG 4 cut(s) 162, 189, 900, 987
Zsp2I ATGCAT 1 cut(s) 952
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.