Rh2CG548100

carboxylesterase 17

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0009064
Physical Location & Seq
Reverse (-)
72806327 .. 72820351
14025 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG548100.1

Sequence Viewer

Length: 687 bp
ATGTGGGTGAAACAACAAGCTCTCAGTCAGAGTTGTGAGCAAAAATGGTGGTTAAGTCGGTGCAACCTCTCGAGCTTGTTCATAGGTGGTGACAGTGCAGGGGCTAACATAGCCTACAATGTCACCACCCAGTTGTCAAATGAACAGTCGGTTTTAAAACCACTGCGTCTCAAAGGTACTGTTTTGATCCAACCTTTCTTTGGAGGTGAAGCGCGTACTTGGTCTGAAAAATATGCAACTCAGCCGCCACAGTCTGCACTAACTCTATCAAACTCCGATGTGTATTGGCGATTGTCACTGCCGTTGGGGGCCAACCGAGACCATCCGTGGTGCAATCCCTTAGCGAATGGTGTGGCCAAGTTGAGGGACTTGAGAATCCCAGCTATAATGGTGTGCGTATCAGAGTTGGATATATTGAAGGATAGGAATTTGGAGCTGTGTAATGCTTTGACTAGCTTGGGAAAAAAGGTGGAAACAGTAATGTACAAAGGGGTTGGGCATGCATTTCAAGTTCTGCATAATTCTCAGCTCTCTCATCCTAGGACCCAAGAACTAGTGTCCCACATCAAGGCTTTCATAAACCACGTTGTGGCGAAGACAAGAATGCTCTTTGGAATGCAAGGTTTTCAGACTGAGTTCGCTGCTATCCTTTCCAGTTTCATGAGGGAGGATGTGCAGATTACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009056 GO:0016787
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

228

Amino Acids

25.55

Weight (kDa)

9.16

Isoelectric Point (pI)

37.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_3 PF07859 7 - 170 3.8e-31 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 589
AccII CGCG 1 cut(s) 214
AciI CCGC 1 cut(s) 245
AclWI GGATC 1 cut(s) 181
AcoI YGGCCR 1 cut(s) 354
AcsI RAATTY 1 cut(s) 427
AdeI CACNNNGTG 1 cut(s) 589
AfaI GTAC 3 cut(s) 178, 217, 485
AfiI CCNNNNNNNGG 4 cut(s) 200, 363, 568, 589
AgsI TTSAA 2 cut(s) 418, 509
AhlI ACTAGT 1 cut(s) 553
AluBI AGCT 6 cut(s) 20, 75, 383, 436, 456, 529
AluI AGCT 6 cut(s) 20, 75, 383, 436, 456, 529
Alw26I GTCTC 2 cut(s) 173, 312
AlwI GGATC 1 cut(s) 181
Ama87I CYCGRG 1 cut(s) 70
AoxI GGCC 2 cut(s) 309, 354
ApeKI GCWGC 1 cut(s) 641
ApoI RAATTY 1 cut(s) 427
ArsI GACNNNNNNTTYG 2 cut(s) 131, 163
AspA2I CCTAGG 1 cut(s) 539
AspLEI GCGC 1 cut(s) 214
AspS9I GGNCC 2 cut(s) 309, 543
AsuHPI GGTGA 4 cut(s) 19, 101, 115, 218
AvaI CYCGRG 1 cut(s) 70
AvaII GGWCC 1 cut(s) 543
AvrII CCTAGG 1 cut(s) 539
BalI TGGCCA 1 cut(s) 356
BbsI GAAGAC 1 cut(s) 602
BbvI GCAGC 1 cut(s) 628
BccI CCATC 1 cut(s) 330
BceAI ACGGC 1 cut(s) 286
BcoDI GTCTC 2 cut(s) 173, 312
BcuI ACTAGT 1 cut(s) 553
BfaI CTAG 3 cut(s) 453, 540, 554
BisI GCNGC 2 cut(s) 245, 642
BlnI CCTAGG 1 cut(s) 539
BlsI GCNGC 2 cut(s) 246, 643
Bme18I GGWCC 1 cut(s) 543
BmeT110I CYCGRG 1 cut(s) 70
BmgT120I GGNCC 2 cut(s) 309, 543
BmiI GGNNCC 2 cut(s) 310, 545
BmrI ACTGGG 1 cut(s) 124
BmuI ACTGGG 1 cut(s) 124
BpiI GAAGAC 1 cut(s) 602
Bpu10I CCTNAGC 1 cut(s) 340
BpuEI CTTGAG 1 cut(s) 391
BsaI GGTCTC 1 cut(s) 312
BsaJI CCNNGG 2 cut(s) 326, 539
Bsc4I CCNNNNNNNGG 4 cut(s) 200, 363, 568, 589
Bse1I ACTGG 2 cut(s) 130, 654
BseDI CCNNGG 2 cut(s) 326, 539
BseGI GGATG 3 cut(s) 322, 535, 676
BseLI CCNNNNNNNGG 4 cut(s) 200, 363, 568, 589
BseMII CTCAG 4 cut(s) 37, 254, 539, 624
BseNI ACTGG 2 cut(s) 130, 654
BseXI GCAGC 1 cut(s) 628
BseYI CCCAGC 1 cut(s) 379
BsgI GTGCAG 2 cut(s) 117, 240
Bsh1236I CGCG 1 cut(s) 214
BshFI GGCC 2 cut(s) 311, 356
BsiHKCI CYCGRG 1 cut(s) 70
BslFI GGGAC 2 cut(s) 380, 544
BslI CCNNNNNNNGG 4 cut(s) 200, 363, 568, 589
BsmAI GTCTC 2 cut(s) 173, 312
BsmBI CGTCTC 1 cut(s) 173
BsmFI GGGAC 2 cut(s) 380, 544
BsmI GAATGC 2 cut(s) 609, 621
BsnI GGCC 2 cut(s) 311, 356
Bso31I GGTCTC 1 cut(s) 312
BsoBI CYCGRG 1 cut(s) 70
Bsp1407I TGTACA 1 cut(s) 483
Bsp143I GATC 1 cut(s) 186
BspACI CCGC 1 cut(s) 245
BspANI GGCC 2 cut(s) 311, 356
BspCNI CTCAG 4 cut(s) 36, 253, 538, 625
BspFNI CGCG 1 cut(s) 214
BspHI TCATGA 1 cut(s) 660
BspLI GGNNCC 2 cut(s) 310, 545
BspPI GGATC 1 cut(s) 181
BspTNI GGTCTC 1 cut(s) 312
BsrGI TGTACA 1 cut(s) 483
BsrI ACTGG 2 cut(s) 130, 654
BssECI CCNNGG 2 cut(s) 326, 539
BssMI GATC 1 cut(s) 186
BssT1I CCWWGG 1 cut(s) 539
Bst4CI ACNGT 5 cut(s) 95, 147, 181, 252, 478
BstAUI TGTACA 1 cut(s) 483
BstC8I GCNNGC 1 cut(s) 501
BstDEI CTNAG 5 cut(s) 23, 240, 340, 525, 633
BstDSI CCRYGG 1 cut(s) 326
BstF5I GGATG 3 cut(s) 322, 535, 676
BstFNI CGCG 1 cut(s) 214
BstHHI GCGC 1 cut(s) 214
BstKTI GATC 1 cut(s) 189
BstMAI GTCTC 2 cut(s) 173, 312
BstMBI GATC 1 cut(s) 186
BstMWI GCNNNNNNNGC 1 cut(s) 110
BstNSI RCATGY 1 cut(s) 503
BstUI CGCG 1 cut(s) 214
BstV1I GCAGC 1 cut(s) 628
BstV2I GAAGAC 1 cut(s) 602
BsuRI GGCC 2 cut(s) 311, 356
BtgI CCRYGG 1 cut(s) 326
BtsCI GGATG 3 cut(s) 322, 535, 676
BtsI GCAGTG 2 cut(s) 161, 296
BtsIMutI CAGTG 3 cut(s) 100, 161, 296
Cac8I GCNNGC 1 cut(s) 501
CciI TCATGA 1 cut(s) 660
CfoI GCGC 1 cut(s) 214
Cfr13I GGNCC 2 cut(s) 309, 543
CseI GACGC 1 cut(s) 155
Csp6I GTAC 3 cut(s) 177, 216, 484
CspCI CAANNNNNGTGG 2 cut(s) 29, 64
CviAII CATG 3 cut(s) 500, 661, 684
CviQI GTAC 3 cut(s) 177, 216, 484
DdeI CTNAG 5 cut(s) 23, 240, 340, 525, 633
DpnI GATC 1 cut(s) 188
DpnII GATC 1 cut(s) 186
DraI TTTAAA 1 cut(s) 156
DraIII CACNNNGTG 1 cut(s) 589
EaeI YGGCCR 1 cut(s) 354
Eco130I CCWWGG 1 cut(s) 539
Eco31I GGTCTC 1 cut(s) 312
Eco47I GGWCC 1 cut(s) 543
Eco88I CYCGRG 1 cut(s) 70
EcoO109I RGGNCCY 1 cut(s) 543
EcoT14I CCWWGG 1 cut(s) 539
EcoT22I ATGCAT 1 cut(s) 505
ErhI CCWWGG 1 cut(s) 539
Esp3I CGTCTC 1 cut(s) 173
FaeI CATG 3 cut(s) 503, 664, 687
FaqI GGGAC 2 cut(s) 380, 544
FatI CATG 3 cut(s) 499, 660, 683
Fnu4HI GCNGC 2 cut(s) 245, 642
FokI GGATG 3 cut(s) 309, 522, 683
Fsp4HI GCNGC 2 cut(s) 245, 642
FspBI CTAG 3 cut(s) 453, 540, 554
GlaI GCGC 1 cut(s) 213
GluI GCNGC 2 cut(s) 245, 642
GsaI CCCAGC 1 cut(s) 383
HaeIII GGCC 2 cut(s) 311, 356
HgaI GACGC 1 cut(s) 155
HhaI GCGC 1 cut(s) 214
Hin1II CATG 3 cut(s) 503, 664, 687
Hin6I GCGC 1 cut(s) 212
HinP1I GCGC 1 cut(s) 212
HinfI GANTC 1 cut(s) 375
HphI GGTGA 4 cut(s) 19, 101, 115, 218
Hpy188I TCNGA 5 cut(s) 30, 226, 277, 403, 630
Hpy188III TCNNGA 2 cut(s) 70, 661
HpyAV CCTTC 1 cut(s) 412
HpyCH4III ACNGT 5 cut(s) 95, 147, 181, 252, 478
HpyCH4IV ACGT 1 cut(s) 585
HpyCH4V TGCA 9 cut(s) 63, 98, 236, 257, 333, 503, 517, 619, 676
HpyF10VI GCNNNNNNNGC 1 cut(s) 110
HpyF3I CTNAG 5 cut(s) 23, 240, 340, 525, 633
HpySE526I ACGT 1 cut(s) 585
Hsp92II CATG 3 cut(s) 503, 664, 687
HspAI GCGC 1 cut(s) 212
Kzo9I GATC 1 cut(s) 186
LmnI GCTCC 1 cut(s) 433
LpnPI CCDG 4 cut(s) 84, 143, 393, 667
Lsp1109I GCAGC 1 cut(s) 628
MaeI CTAG 3 cut(s) 453, 540, 554
MaeII ACGT 1 cut(s) 585
MaeIII GTNAC 3 cut(s) 89, 121, 294
MalI GATC 1 cut(s) 188
MboI GATC 1 cut(s) 186
MboII GAAGA 1 cut(s) 607
MlsI TGGCCA 1 cut(s) 356
MluCI AATT 2 cut(s) 427, 520
MluNI TGGCCA 1 cut(s) 356
MmeI TCCRAC 2 cut(s) 214, 387
MnlI CCTC 5 cut(s) 77, 197, 357, 657, 661
Mox20I TGGCCA 1 cut(s) 356
Mph1103I ATGCAT 1 cut(s) 505
MscI TGGCCA 1 cut(s) 356
MseI TTAA 2 cut(s) 53, 155
Msp20I TGGCCA 1 cut(s) 356
Mva1269I GAATGC 2 cut(s) 609, 621
MvnI CGCG 1 cut(s) 214
MwoI GCNNNNNNNGC 1 cut(s) 110
NdeII GATC 1 cut(s) 186
NlaIII CATG 3 cut(s) 503, 664, 687
NlaIV GGNNCC 2 cut(s) 310, 545
NmuCI GTSAC 3 cut(s) 89, 121, 294
NsiI ATGCAT 1 cut(s) 505
NspI RCATGY 1 cut(s) 503
PaeI GCATGC 1 cut(s) 503
PaeR7I CTCGAG 1 cut(s) 70
PagI TCATGA 1 cut(s) 660
PctI GAATGC 2 cut(s) 609, 621
PfeI GAWTC 1 cut(s) 375
PflMI CCANNNNNTGG 1 cut(s) 589
PkrI GCNGC 2 cut(s) 246, 643
PpuMI RGGWCCY 1 cut(s) 543
Psp5II RGGWCCY 1 cut(s) 543
PspFI CCCAGC 1 cut(s) 379
PspN4I GGNNCC 2 cut(s) 310, 545
PspPI GGNCC 2 cut(s) 309, 543
PspPPI RGGWCCY 1 cut(s) 543
RsaI GTAC 3 cut(s) 178, 217, 485
RsaNI GTAC 3 cut(s) 177, 216, 484
SaqAI TTAA 2 cut(s) 53, 155
SatI GCNGC 2 cut(s) 245, 642
Sau3AI GATC 1 cut(s) 186
Sau96I GGNCC 2 cut(s) 309, 543
Sfr274I CTCGAG 1 cut(s) 70
SinI GGWCC 1 cut(s) 543
SlaI CTCGAG 1 cut(s) 70
SmlI CTYRAG 2 cut(s) 70, 370
SmoI CTYRAG 2 cut(s) 70, 370
SpeI ACTAGT 1 cut(s) 553
SphI GCATGC 1 cut(s) 503
Sse9I AATT 2 cut(s) 427, 520
SsiI CCGC 1 cut(s) 245
SspMI CTAG 3 cut(s) 453, 540, 554
StyI CCWWGG 1 cut(s) 539
TaaI ACNGT 5 cut(s) 95, 147, 181, 252, 478
TaiI ACGT 1 cut(s) 588
TaqI TCGA 1 cut(s) 71
TasI AATT 2 cut(s) 427, 520
TatI WGTACW 1 cut(s) 483
TauI GCSGC 1 cut(s) 247
TfiI GAWTC 1 cut(s) 375
Tru1I TTAA 2 cut(s) 53, 155
Tru9I TTAA 2 cut(s) 53, 155
TscAI CASTG 3 cut(s) 100, 168, 303
TseFI GTSAC 3 cut(s) 89, 121, 294
TseI GCWGC 1 cut(s) 641
Tsp45I GTSAC 3 cut(s) 89, 121, 294
TspDTI ATGAA 4 cut(s) 70, 156, 565, 649
TspGWI ACGGA 1 cut(s) 315
TspRI CASTG 3 cut(s) 100, 168, 303
Van91I CCANNNNNTGG 1 cut(s) 589
VpaK11BI GGWCC 1 cut(s) 543
XapI RAATTY 1 cut(s) 427
XceI RCATGY 1 cut(s) 503
XcmI CCANNNNNNNNNTGG 1 cut(s) 197
XhoI CTCGAG 1 cut(s) 70
XmaJI CCTAGG 1 cut(s) 539
XspI CTAG 3 cut(s) 453, 540, 554
Zsp2I ATGCAT 1 cut(s) 505
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.