FvH4_6g49351

Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH ubiquinone oxidoreductase complex (complex I)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0005361
Physical Location & Seq
Forward (+)
36982506 .. 36985442
2937 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g49351.t3

Sequence Viewer

Length: 1134 bp
ATGGAGGAGGTTCTGACGAACCCGAAAGCTGGGTTCTACATGAACCGGGATGTGTTTGGGGCCGGAGGTGATTTCATTACCTCTCCAGAAGTCAGCCAAATGTTTGGGGAGATGGTTGGTGTTTGGGCAATGTCTCTATGGGAGCAAATGGGGCAGCCAGGAAAAATCAACTTAGTAGAGCTAGGTCCGGGGAGGGGGACACTCATGGCCGACCTTCTTCGGGGTGTGTCGAAGTTTAAGAGCTTCACTGATTCGTTGCATGTACACATGGTGGAGTGCAGCCCTGCGTTACAGAAGCTCCAGCAACAGGCCCTCAAATGTGTAGATGAAGAGAGTGAGGCTGACACGGCCGATAAAAGGGCTGTCAGCACTTTGGCTAATGCTCCTGTGTCATGGCATGCCACATTGGACAAGGTTCCTTCAGGATTACCATCTATCATCATCGCCCATGAGTTTTATGATGCTTTACCAGTTCATCAATTTCAGAGGGCTTCTCGTGGCTGGTGTGAGAAAATGGTGGATGTTTCAGAAGATTCAAAGTTCCGCTTTGTTCTTTCTTCACAGCCTACACCAGCAACACTTTATCTGGCGAAACGTTGCAAATGGGCTGGGATGGAAGAAATAAAGAAGCTTGATCATGTTGAGGTTTGCCCTGCATCAATGGAGTTAACTCAAAGTATCGCTGATAGAATTGCTTCTGATGGGGGTGGTGCTCTTGTAATTGATTATGGTCAGAATGGAGTAGTCTCTGATAGTCTGCAGGCAATTCGGAAACATAAATTTGTCGACATTCTAGATGATCCAGGATCTGCTGATCTCAGTGCATACGTTGATTTTGCTTCTATCAGGCACTCAGCCGAGGAAGCTTCAGGAGATGTGTCTGTTCATGGCCCTATCACTCAGTCACAGTTCCTTGGGTCTCTTGGGATAAATTTCCGAGTGGAAGCATTATTACAGAACTGCACAGAGGAACAATTTGAATCTCTCAGGTCAGGGTACTGGCAACTGGTAGGAGAAGGTGAGGCTCCCTTCTGGGAGGGTCCTGACGAAAAAGTTCCCATCGGAATGGGTACCCGTTATTTGGTAATGGCTATTGTGAACAAGAAGCAAGGTGTTCCAGTTCCATTTCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04714 map04714
Pfam Domains
Protein Families
Methyltransf_28

Protein Analysis

378

Amino Acids

41.32

Weight (kDa)

4.97

Isoelectric Point (pI)

46.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_28 PF02636 129 - 389 2.1e-65 Putative S-adenosyl-L-methionine-dependent methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1070
AccB1I GGYRCC 1 cut(s) 1070
AccI GTMKAC 1 cut(s) 786
AciI CCGC 1 cut(s) 544
AclI AACGTT 1 cut(s) 595
AclWI GGATC 2 cut(s) 794, 814
AcoI YGGCCR 2 cut(s) 207, 348
AcsI RAATTY 2 cut(s) 779, 931
AcuI CTGAAG 2 cut(s) 405, 852
AdeI CACNNNGTG 1 cut(s) 271
AfaI GTAC 3 cut(s) 264, 998, 1072
AfiI CCNNNNNNNGG 6 cut(s) 29, 194, 220, 307, 357, 1081
AgsI TTSAA 2 cut(s) 537, 980
AjnI CCWGG 2 cut(s) 157, 802
AluBI AGCT 6 cut(s) 29, 181, 243, 298, 631, 866
AluI AGCT 6 cut(s) 29, 181, 243, 298, 631, 866
Alw21I GWGCWC 1 cut(s) 715
Alw26I GTCTC 3 cut(s) 138, 751, 924
AlwI GGATC 2 cut(s) 794, 814
AlwNI CAGNNNCTG 1 cut(s) 809
AoxI GGCC 5 cut(s) 60, 207, 309, 348, 889
ApeKI GCWGC 2 cut(s) 154, 279
ApoI RAATTY 2 cut(s) 779, 931
Asp700I GAANNNNTTC 2 cut(s) 694, 1053
Asp718I GGTACC 1 cut(s) 1070
AspS9I GGNCC 5 cut(s) 60, 185, 310, 890, 1040
AsuC2I CCSGG 2 cut(s) 47, 189
AsuHPI GGTGA 2 cut(s) 80, 1031
AvaII GGWCC 2 cut(s) 185, 1040
BanI GGYRCC 1 cut(s) 1070
BarI GAAGNNNNNNTAC 2 cut(s) 936, 968
BauI CACGAG 1 cut(s) 495
Bbv12I GWGCWC 1 cut(s) 715
BbvI GCAGC 2 cut(s) 166, 291
BccI CCATC 5 cut(s) 106, 439, 607, 695, 1067
BceAI ACGGC 1 cut(s) 363
BcgI CGANNNNNNTGC 2 cut(s) 749, 783
BciT130I CCWGG 2 cut(s) 159, 804
BclI TGATCA 1 cut(s) 634
BcnI CCSGG 2 cut(s) 47, 189
BcoDI GTCTC 3 cut(s) 138, 751, 924
BfaI CTAG 2 cut(s) 182, 794
BfmI CTRYAG 1 cut(s) 758
BisI GCNGC 2 cut(s) 155, 280
BlsI GCNGC 2 cut(s) 156, 281
Bme1390I CCNGG 4 cut(s) 47, 159, 189, 804
Bme18I GGWCC 2 cut(s) 185, 1040
BmgT120I GGNCC 5 cut(s) 60, 185, 310, 890, 1040
BmiI GGNNCC 5 cut(s) 61, 417, 1026, 1041, 1072
BmrFI CCNGG 4 cut(s) 47, 159, 189, 804
BmsI GCATC 2 cut(s) 451, 665
BplI GAGNNNNNCTC 2 cut(s) 478, 510
BpmI CTGGAG 2 cut(s) 69, 284
BpuMI CCSGG 2 cut(s) 47, 189
BsaBI GATNNNNATC 1 cut(s) 430
BsaI GGTCTC 1 cut(s) 924
BsaJI CCNNGG 3 cut(s) 188, 858, 913
BsaXI ACNNNNNCTCC 2 cut(s) 282, 312
Bsc4I CCNNNNNNNGG 6 cut(s) 29, 194, 220, 307, 357, 1081
Bse1I ACTGG 4 cut(s) 470, 1004, 1011, 1118
Bse3DI GCAATG 1 cut(s) 135
Bse8I GATNNNNATC 1 cut(s) 430
BseBI CCWGG 2 cut(s) 159, 804
BseDI CCNNGG 3 cut(s) 188, 858, 913
BseGI GGATG 3 cut(s) 55, 526, 618
BseJI GATNNNNATC 1 cut(s) 430
BseLI CCNNNNNNNGG 6 cut(s) 29, 194, 220, 307, 357, 1081
BseMI GCAATG 1 cut(s) 135
BseMII CTCAG 4 cut(s) 832, 867, 914, 1000
BseNI ACTGG 4 cut(s) 470, 1004, 1011, 1118
BseRI GAGGAG 1 cut(s) 20
BseX3I CGGCCG 1 cut(s) 348
BseXI GCAGC 2 cut(s) 166, 291
BseYI CCCAGC 2 cut(s) 29, 608
BsgI GTGCAG 2 cut(s) 298, 946
Bsh1285I CGRYCG 1 cut(s) 351
BshFI GGCC 5 cut(s) 62, 209, 311, 350, 891
BshNI GGYRCC 1 cut(s) 1070
BsiEI CGRYCG 1 cut(s) 351
BsiHKAI GWGCWC 1 cut(s) 715
BsiSI CCGG 3 cut(s) 46, 63, 188
BslFI GGGAC 1 cut(s) 211
BslI CCNNNNNNNGG 6 cut(s) 29, 194, 220, 307, 357, 1081
BsmAI GTCTC 3 cut(s) 138, 751, 924
BsmFI GGGAC 1 cut(s) 211
BsnI GGCC 5 cut(s) 62, 209, 311, 350, 891
Bso31I GGTCTC 1 cut(s) 924
Bsp1286I GDGCHC 1 cut(s) 715
Bsp1407I TGTACA 1 cut(s) 262
Bsp143I GATC 4 cut(s) 634, 799, 806, 814
BspACI CCGC 1 cut(s) 544
BspANI GGCC 5 cut(s) 62, 209, 311, 350, 891
BspCNI CTCAG 4 cut(s) 831, 866, 913, 999
BspLI GGNNCC 5 cut(s) 61, 417, 1026, 1041, 1072
BspMAI CTGCAG 1 cut(s) 762
BspPI GGATC 2 cut(s) 794, 814
BspT107I GGYRCC 1 cut(s) 1070
BspTNI GGTCTC 1 cut(s) 924
BsrDI GCAATG 1 cut(s) 135
BsrGI TGTACA 1 cut(s) 262
BsrI ACTGG 4 cut(s) 470, 1004, 1011, 1118
BssECI CCNNGG 3 cut(s) 188, 858, 913
BssMI GATC 4 cut(s) 634, 799, 806, 814
BssSI CACGAG 1 cut(s) 495
BssT1I CCWWGG 1 cut(s) 913
Bst2BI CACGAG 1 cut(s) 495
Bst2UI CCWGG 2 cut(s) 159, 804
Bst4CI ACNGT 1 cut(s) 909
Bst6I CTCTTC 1 cut(s) 324
BstAUI TGTACA 1 cut(s) 262
BstC8I GCNNGC 2 cut(s) 399, 762
BstDEI CTNAG 5 cut(s) 172, 818, 853, 900, 986
BstF5I GGATG 3 cut(s) 55, 526, 618
BstKTI GATC 4 cut(s) 637, 802, 809, 817
BstMAI GTCTC 3 cut(s) 138, 751, 924
BstMBI GATC 4 cut(s) 634, 799, 806, 814
BstMCI CGRYCG 1 cut(s) 351
BstMWI GCNNNNNNNGC 3 cut(s) 151, 347, 863
BstNI CCWGG 2 cut(s) 159, 804
BstNSI RCATGY 2 cut(s) 263, 401
BstSCI CCNGG 4 cut(s) 45, 157, 187, 802
BstSFI CTRYAG 1 cut(s) 758
BstV1I GCAGC 2 cut(s) 166, 291
BstX2I RGATCY 1 cut(s) 806
BstXI CCANNNNNNTGG 2 cut(s) 104, 1066
BstYI RGATCY 1 cut(s) 806
BstZI CGGCCG 1 cut(s) 348
BsuRI GGCC 5 cut(s) 62, 209, 311, 350, 891
BtgZI GCGATG 1 cut(s) 427
BtsCI GGATG 3 cut(s) 55, 526, 618
BtsIMutI CAGTG 2 cut(s) 246, 826
Cac8I GCNNGC 2 cut(s) 399, 762
CaiI CAGNNNCTG 1 cut(s) 809
Cfr13I GGNCC 5 cut(s) 60, 185, 310, 890, 1040
Csp6I GTAC 3 cut(s) 263, 997, 1071
CviAII CATG 9 cut(s) 40, 205, 260, 268, 393, 398, 449, 638, 887
CviQI GTAC 3 cut(s) 263, 997, 1071
DdeI CTNAG 5 cut(s) 172, 818, 853, 900, 986
DpnI GATC 4 cut(s) 636, 801, 808, 816
DpnII GATC 4 cut(s) 634, 799, 806, 814
DraIII CACNNNGTG 1 cut(s) 271
EaeI YGGCCR 2 cut(s) 207, 348
EagI CGGCCG 1 cut(s) 348
Eam1104I CTCTTC 1 cut(s) 324
EarI CTCTTC 1 cut(s) 324
EclXI CGGCCG 1 cut(s) 348
Eco130I CCWWGG 1 cut(s) 913
Eco31I GGTCTC 1 cut(s) 924
Eco47I GGWCC 2 cut(s) 185, 1040
Eco52I CGGCCG 1 cut(s) 348
Eco57I CTGAAG 2 cut(s) 405, 852
EcoO109I RGGNCCY 2 cut(s) 310, 1040
EcoRII CCWGG 2 cut(s) 157, 802
EcoT14I CCWWGG 1 cut(s) 913
ErhI CCWWGG 1 cut(s) 913
FaeI CATG 9 cut(s) 43, 208, 263, 271, 396, 401, 452, 641, 890
FalI AAGNNNNNCTT 2 cut(s) 530, 562
FaqI GGGAC 1 cut(s) 211
FatI CATG 9 cut(s) 39, 204, 259, 267, 392, 397, 448, 637, 886
FbaI TGATCA 1 cut(s) 634
FblI GTMKAC 1 cut(s) 786
Fnu4HI GCNGC 2 cut(s) 155, 280
FokI GGATG 3 cut(s) 62, 533, 625
Fsp4HI GCNGC 2 cut(s) 155, 280
FspBI CTAG 2 cut(s) 182, 794
GluI GCNGC 2 cut(s) 155, 280
GsaI CCCAGC 2 cut(s) 33, 612
GsuI CTGGAG 2 cut(s) 69, 284
HaeIII GGCC 5 cut(s) 62, 209, 311, 350, 891
HapII CCGG 3 cut(s) 46, 63, 188
Hin1II CATG 9 cut(s) 43, 208, 263, 271, 396, 401, 452, 641, 890
HincII GTYRAC 2 cut(s) 669, 787
HindII GTYRAC 2 cut(s) 669, 787
HindIII AAGCTT 2 cut(s) 629, 864
HinfI GANTC 3 cut(s) 251, 533, 980
HpaI GTTAAC 1 cut(s) 669
HpaII CCGG 3 cut(s) 46, 63, 188
HphI GGTGA 2 cut(s) 80, 1031
Hpy166II GTNNAC 4 cut(s) 265, 669, 787, 1099
Hpy188I TCNGA 9 cut(s) 15, 486, 529, 700, 735, 751, 771, 938, 1064
Hpy188III TCNNGA 5 cut(s) 86, 423, 794, 870, 1043
Hpy8I GTNNAC 4 cut(s) 265, 669, 787, 1099
HpyAV CCTTC 4 cut(s) 224, 429, 1010, 1039
HpyCH4III ACNGT 1 cut(s) 909
HpyCH4IV ACGT 2 cut(s) 595, 828
HpyCH4V TGCA 7 cut(s) 259, 279, 600, 656, 760, 824, 963
HpyF10VI GCNNNNNNNGC 3 cut(s) 151, 347, 863
HpyF3I CTNAG 5 cut(s) 172, 818, 853, 900, 986
HpySE526I ACGT 2 cut(s) 595, 828
Hsp92II CATG 9 cut(s) 43, 208, 263, 271, 396, 401, 452, 641, 890
KpnI GGTACC 1 cut(s) 1074
Ksp22I TGATCA 1 cut(s) 634
KspAI GTTAAC 1 cut(s) 669
Kzo9I GATC 4 cut(s) 634, 799, 806, 814
LmnI GCTCC 4 cut(s) 142, 303, 388, 1030
Lsp1109I GCAGC 2 cut(s) 166, 291
LweI GCATC 2 cut(s) 451, 665
MaeI CTAG 2 cut(s) 182, 794
MaeII ACGT 2 cut(s) 595, 828
MaeIII GTNAC 2 cut(s) 288, 903
MalI GATC 4 cut(s) 636, 801, 808, 816
MboI GATC 4 cut(s) 634, 799, 806, 814
MboII GAAGA 5 cut(s) 209, 341, 542, 549, 629
MflI RGATCY 1 cut(s) 806
MhlI GDGCHC 1 cut(s) 715
MluCI AATT 7 cut(s) 479, 690, 720, 765, 779, 931, 974
MroXI GAANNNNTTC 2 cut(s) 694, 1053
MseI TTAA 2 cut(s) 237, 668
MslI CAYNNNNRTG 2 cut(s) 1064, 1129
MspI CCGG 3 cut(s) 46, 63, 188
MspR9I CCNGG 4 cut(s) 47, 159, 189, 804
MvaI CCWGG 2 cut(s) 159, 804
MwoI GCNNNNNNNGC 3 cut(s) 151, 347, 863
NciI CCSGG 2 cut(s) 47, 189
NdeII GATC 4 cut(s) 634, 799, 806, 814
NlaIII CATG 9 cut(s) 43, 208, 263, 271, 396, 401, 452, 641, 890
NlaIV GGNNCC 5 cut(s) 61, 417, 1026, 1041, 1072
NmeAIII GCCGAG 1 cut(s) 883
NmuCI GTSAC 1 cut(s) 903
NspI RCATGY 2 cut(s) 263, 401
PaeI GCATGC 1 cut(s) 401
PdmI GAANNNNTTC 2 cut(s) 694, 1053
PfeI GAWTC 3 cut(s) 251, 533, 980
PfoI TCCNGGA 1 cut(s) 802
PkrI GCNGC 2 cut(s) 156, 281
PpuMI RGGWCCY 1 cut(s) 1040
Psp1406I AACGTT 1 cut(s) 595
Psp5II RGGWCCY 1 cut(s) 1040
Psp6I CCWGG 2 cut(s) 157, 802
PspFI CCCAGC 2 cut(s) 29, 608
PspGI CCWGG 2 cut(s) 157, 802
PspN4I GGNNCC 5 cut(s) 61, 417, 1026, 1041, 1072
PspPI GGNCC 5 cut(s) 60, 185, 310, 890, 1040
PspPPI RGGWCCY 1 cut(s) 1040
PstI CTGCAG 1 cut(s) 762
PstNI CAGNNNCTG 1 cut(s) 809
PsuI RGATCY 1 cut(s) 806
RsaI GTAC 3 cut(s) 264, 998, 1072
RsaNI GTAC 3 cut(s) 263, 997, 1071
RseI CAYNNNNRTG 2 cut(s) 1064, 1129
SalI GTCGAC 1 cut(s) 785
SaqAI TTAA 2 cut(s) 237, 668
SatI GCNGC 2 cut(s) 155, 280
Sau3AI GATC 4 cut(s) 634, 799, 806, 814
Sau96I GGNCC 5 cut(s) 60, 185, 310, 890, 1040
ScrFI CCNGG 4 cut(s) 47, 159, 189, 804
SduI GDGCHC 1 cut(s) 715
SfaNI GCATC 2 cut(s) 451, 665
SfcI CTRYAG 1 cut(s) 758
SinI GGWCC 2 cut(s) 185, 1040
SmiMI CAYNNNNRTG 2 cut(s) 1064, 1129
SphI GCATGC 1 cut(s) 401
Sse9I AATT 7 cut(s) 479, 690, 720, 765, 779, 931, 974
SsiI CCGC 1 cut(s) 544
SspMI CTAG 2 cut(s) 182, 794
StyD4I CCNGG 4 cut(s) 45, 157, 187, 802
StyI CCWWGG 1 cut(s) 913
TaaI ACNGT 1 cut(s) 909
TaiI ACGT 2 cut(s) 598, 831
TaqI TCGA 2 cut(s) 230, 786
TasI AATT 7 cut(s) 479, 690, 720, 765, 779, 931, 974
TatI WGTACW 1 cut(s) 262
TfiI GAWTC 3 cut(s) 251, 533, 980
Tru1I TTAA 2 cut(s) 237, 668
Tru9I TTAA 2 cut(s) 237, 668
TscAI CASTG 2 cut(s) 253, 826
TseFI GTSAC 1 cut(s) 903
TseI GCWGC 2 cut(s) 154, 279
Tsp45I GTSAC 1 cut(s) 903
TspDTI ATGAA 5 cut(s) 56, 64, 342, 464, 875
TspRI CASTG 2 cut(s) 253, 826
VpaK11BI GGWCC 2 cut(s) 185, 1040
XapI RAATTY 2 cut(s) 779, 931
XbaI TCTAGA 1 cut(s) 793
XceI RCATGY 2 cut(s) 263, 401
XmiI GTMKAC 1 cut(s) 786
XmnI GAANNNNTTC 2 cut(s) 694, 1053
XspI CTAG 2 cut(s) 182, 794
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.