RchiOBHm_Chr2g0169211

Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH ubiquinone oxidoreductase complex (complex I)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0005361
Physical Location & Seq
Forward (+)
83431817 .. 83435275
3459 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ53682

Sequence Viewer

Length: 1437 bp
ATGTTGAGACGACTACTCCTACAAGCTTCCACTACTCGTCGCCTTGCCGGTGCCCACTTCACTCCACCATCTTCACCTCCTTTGCTTCGTTATCGTCCACTTTCTTCTTCTTCTTCTTCAACCCAAATCCCAGAGACTCATTTGGGGGACAACCCTGACCAACCCTCTGCCACCATCTCCATCGACCGCTCCGGCCTTTGCAATCCCCCCGCGCATTCCCATGAACCCTGTTCCGACTCCGAGCTCGTCAAGCACCTCAAAGGCATCATCAAGTTCCGCGGTGGCCCAATCTCGGTGGCTGAGTATATGGAGGAGGTTTTGACGAACCCGAAAGCTGGGTTCTACATGAACCGTGATGTCTTTGGAGCCGGAGGTGATTTTATCACCTCCCCAGAAGTGAGCCAGATGTTCGGGGAGATGGTTGGTGTTTGGGCGATGTCTCTGTGGGAGCAGATGGGGCAGCCAGGAAAAATGAACCTAGTAGAGCTAGGTCCAGGAAGAGGAACTCTCATGGCCGACCTTCTTCGGGGTGCGTCCAAGTTTAAGAACTTCACTGAATCGTTGCATGTACACATGGTGGAGTGCAGTCCTGCATTACAGAAGCTCCAGCACCAGGCCCTGAAATGTGTAGATGAAGAGGGTATGGCTGACACGGCTGAGAAAAGGACTGTCAGCACTTTGGCTAAAACTCCTGTGTCATGGCATGCCACATTCGACCAGGTTCCTTCAGGATTGCCATCTATTATCATCGCCCATGAGTTTTATGATGCTTTACCAGTTCATCAATTTCAGAGGGCTTCTCGTGGCTGGTGTGAGAAAATGGTGGATGTTGCAGAAGATTCAAAGTTCCGTTTTGTTCTTTCTTCACAGCCTACACCAGCAACGCTTTATCTGGCAAAACGCTGCAAATGGGCTGGAATGGAAGAAATAGCGAAGCTTGATCATGTAGAGGTTTGCCCTGCATCAATGGAGTTGACTCAAAGTATTGCTGATAGAATTGCTTCTGATGGGGGTGGTGCTCTTGTAATTGATTATGGTCAGAATGGAGTAGTCTCTGACAGTCTGCAGGCAATTCGGAAACATAAGTTTGTTGACATTCTAGACAATCCAGGATCAGCTGATCTCAGTGCCTACGTTGATTTTGCTTCCATCAGGCATTCTGCTGAGGAAGCTTCAGGAGAAGTGTCTGTTCATGGCCCTATTACTCAGTCTCAGTTCCTTGGCTCTCTTGGGATAAATTTCCGAGTGGAAGCATTGTTACAGAACTGCACGGAGGAACAATTTGAATCTCTCAGGTCAGGGTATTGGCAACTGGTTGGAGAAGGTGAGGCTCCCTTCTGGGAGGGTCCTGACGAAAAAGTTCCCATCGGAATGGGTACCCGTTATTTGGTAATGGCTATTGTGAACAAGAAGCATGGTGTTCCAGTCCCATTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04714 map04714
Pfam Domains
Protein Families
Methyltransf_28

Protein Analysis

478

Amino Acids

52.31

Weight (kDa)

5.68

Isoelectric Point (pI)

48.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_28 PF02636 140 - 400 6.2e-65 Putative S-adenosyl-L-methionine-dependent methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1376
AccB1I GGYRCC 2 cut(s) 50, 1376
AccBSI CCGCTC 1 cut(s) 189
AccII CGCG 2 cut(s) 212, 279
AciI CCGC 4 cut(s) 187, 210, 277, 279
AclWI GGATC 1 cut(s) 1120
AcoI YGGCCR 1 cut(s) 513
AcsI RAATTY 1 cut(s) 1237
AcuI CTGAAG 2 cut(s) 711, 1158
AdeI CACNNNGTG 1 cut(s) 577
AfaI GTAC 2 cut(s) 570, 1378
AfiI CCNNNNNNNGG 6 cut(s) 292, 335, 500, 526, 613, 1387
AgsI TTSAA 3 cut(s) 120, 843, 1286
AjnI CCWGG 5 cut(s) 463, 493, 612, 717, 1108
AluBI AGCT 8 cut(s) 26, 244, 335, 487, 604, 937, 1118, 1172
AluI AGCT 8 cut(s) 26, 244, 335, 487, 604, 937, 1118, 1172
Alw21I GWGCWC 2 cut(s) 246, 1021
Alw26I GTCTC 4 cut(s) 128, 444, 1057, 1215
AlwI GGATC 1 cut(s) 1120
AlwNI CAGNNNCTG 1 cut(s) 619
AoxI GGCC 5 cut(s) 193, 283, 513, 615, 1195
ApeKI GCWGC 2 cut(s) 460, 903
ApoI RAATTY 1 cut(s) 1237
Asp700I GAANNNNTTC 2 cut(s) 1000, 1359
Asp718I GGTACC 1 cut(s) 1376
AspLEI GCGC 1 cut(s) 214
AspS9I GGNCC 5 cut(s) 284, 491, 616, 1196, 1346
AsuHPI GGTGA 4 cut(s) 66, 376, 386, 1337
AvaII GGWCC 2 cut(s) 491, 1346
BaeGI GKGCMC 1 cut(s) 55
BanI GGYRCC 2 cut(s) 50, 1376
BanII GRGCYC 1 cut(s) 246
BarI GAAGNNNNNNTAC 2 cut(s) 1242, 1274
BauI CACGAG 1 cut(s) 801
Bbv12I GWGCWC 2 cut(s) 246, 1021
BbvCI CCTCAGC 1 cut(s) 1164
BbvI GCAGC 2 cut(s) 472, 890
BccI CCATC 9 cut(s) 76, 182, 188, 412, 448, 745, 1001, 1157, 1373
BceAI ACGGC 1 cut(s) 669
BcgI CGANNNNNNTGC 2 cut(s) 1055, 1089
BciT130I CCWGG 5 cut(s) 465, 495, 614, 719, 1110
BclI TGATCA 1 cut(s) 940
BcoDI GTCTC 4 cut(s) 128, 444, 1057, 1215
BfaI CTAG 3 cut(s) 479, 488, 1100
BfmI CTRYAG 1 cut(s) 1064
BisI GCNGC 2 cut(s) 461, 904
BlsI GCNGC 2 cut(s) 462, 905
Bme1390I CCNGG 5 cut(s) 465, 495, 614, 719, 1110
Bme18I GGWCC 2 cut(s) 491, 1346
BmgT120I GGNCC 5 cut(s) 284, 491, 616, 1196, 1346
BmiI GGNNCC 6 cut(s) 52, 367, 723, 1332, 1347, 1378
BmrFI CCNGG 5 cut(s) 465, 495, 614, 719, 1110
BmsI GCATC 3 cut(s) 273, 757, 971
BplI GAGNNNNNCTC 4 cut(s) 492, 524, 784, 816
BpmI CTGGAG 1 cut(s) 590
Bpu10I CCTNAGC 1 cut(s) 1164
BsaBI GATNNNNATC 1 cut(s) 736
BsaJI CCNNGG 2 cut(s) 277, 1219
BsaXI ACNNNNNCTCC 3 cut(s) 30, 588, 618
Bsc4I CCNNNNNNNGG 6 cut(s) 292, 335, 500, 526, 613, 1387
Bse118I RCCGGY 1 cut(s) 47
Bse1I ACTGG 3 cut(s) 776, 1317, 1424
Bse8I GATNNNNATC 1 cut(s) 736
BseBI CCWGG 5 cut(s) 465, 495, 614, 719, 1110
BseDI CCNNGG 2 cut(s) 277, 1219
BseGI GGATG 1 cut(s) 832
BseJI GATNNNNATC 1 cut(s) 736
BseLI CCNNNNNNNGG 6 cut(s) 292, 335, 500, 526, 613, 1387
BseMII CTCAG 7 cut(s) 291, 648, 1138, 1155, 1220, 1226, 1306
BseNI ACTGG 3 cut(s) 776, 1317, 1424
BseRI GAGGAG 1 cut(s) 326
BseSI GKGCMC 1 cut(s) 55
BseXI GCAGC 2 cut(s) 472, 890
BseYI CCCAGC 1 cut(s) 335
BsgI GTGCAG 2 cut(s) 604, 1252
Bsh1236I CGCG 2 cut(s) 212, 279
Bsh1285I CGRYCG 1 cut(s) 187
BshFI GGCC 5 cut(s) 195, 285, 515, 617, 1197
BshNI GGYRCC 2 cut(s) 50, 1376
BsiEI CGRYCG 1 cut(s) 187
BsiHKAI GWGCWC 2 cut(s) 246, 1021
BsiSI CCGG 3 cut(s) 48, 192, 369
BslFI GGGAC 2 cut(s) 161, 1412
BslI CCNNNNNNNGG 6 cut(s) 292, 335, 500, 526, 613, 1387
BsmAI GTCTC 4 cut(s) 128, 444, 1057, 1215
BsmFI GGGAC 2 cut(s) 161, 1412
BsmI GAATGC 2 cut(s) 214, 1156
BsnI GGCC 5 cut(s) 195, 285, 515, 617, 1197
Bsp1286I GDGCHC 3 cut(s) 55, 246, 1021
Bsp1407I TGTACA 1 cut(s) 568
Bsp143I GATC 3 cut(s) 940, 1112, 1120
BspACI CCGC 4 cut(s) 187, 210, 277, 279
BspANI GGCC 5 cut(s) 195, 285, 515, 617, 1197
BspCNI CTCAG 7 cut(s) 292, 649, 1137, 1156, 1219, 1225, 1305
BspFNI CGCG 2 cut(s) 212, 279
BspLI GGNNCC 6 cut(s) 52, 367, 723, 1332, 1347, 1378
BspMAI CTGCAG 1 cut(s) 1068
BspPI GGATC 1 cut(s) 1120
BspT107I GGYRCC 2 cut(s) 50, 1376
BsrBI CCGCTC 1 cut(s) 189
BsrFI RCCGGY 1 cut(s) 47
BsrGI TGTACA 1 cut(s) 568
BsrI ACTGG 3 cut(s) 776, 1317, 1424
BssAI RCCGGY 1 cut(s) 47
BssECI CCNNGG 2 cut(s) 277, 1219
BssMI GATC 3 cut(s) 940, 1112, 1120
BssSI CACGAG 1 cut(s) 801
BssT1I CCWWGG 1 cut(s) 1219
Bst2BI CACGAG 1 cut(s) 801
Bst2UI CCWGG 5 cut(s) 465, 495, 614, 719, 1110
Bst4CI ACNGT 3 cut(s) 353, 670, 1061
Bst6I CTCTTC 2 cut(s) 493, 630
BstAUI TGTACA 1 cut(s) 568
BstC8I GCNNGC 2 cut(s) 705, 1068
BstDEI CTNAG 7 cut(s) 300, 657, 1124, 1164, 1206, 1212, 1292
BstDSI CCRYGG 1 cut(s) 277
BstF5I GGATG 1 cut(s) 832
BstFNI CGCG 2 cut(s) 212, 279
BstHHI GCGC 1 cut(s) 214
BstKTI GATC 3 cut(s) 943, 1115, 1123
BstMAI GTCTC 4 cut(s) 128, 444, 1057, 1215
BstMBI GATC 3 cut(s) 940, 1112, 1120
BstMCI CGRYCG 1 cut(s) 187
BstMWI GCNNNNNNNGC 4 cut(s) 250, 457, 653, 1169
BstNI CCWGG 5 cut(s) 465, 495, 614, 719, 1110
BstNSI RCATGY 2 cut(s) 569, 707
BstSCI CCNGG 5 cut(s) 463, 493, 612, 717, 1108
BstSFI CTRYAG 1 cut(s) 1064
BstSLI GKGCMC 1 cut(s) 55
BstUI CGCG 2 cut(s) 212, 279
BstV1I GCAGC 2 cut(s) 472, 890
BstXI CCANNNNNNTGG 1 cut(s) 1372
BsuRI GGCC 5 cut(s) 195, 285, 515, 617, 1197
BtgI CCRYGG 1 cut(s) 277
BtgZI GCGATG 2 cut(s) 449, 733
BtsCI GGATG 1 cut(s) 832
BtsIMutI CAGTG 2 cut(s) 552, 1132
Cac8I GCNNGC 2 cut(s) 705, 1068
CaiI CAGNNNCTG 1 cut(s) 619
CfoI GCGC 1 cut(s) 214
Cfr10I RCCGGY 1 cut(s) 47
Cfr13I GGNCC 5 cut(s) 284, 491, 616, 1196, 1346
Cfr42I CCGCGG 1 cut(s) 280
CseI GACGC 1 cut(s) 522
CsiI ACCWGGT 1 cut(s) 717
Csp6I GTAC 2 cut(s) 569, 1377
CspCI CAANNNNNGTGG 2 cut(s) 276, 311
CviQI GTAC 2 cut(s) 569, 1377
DdeI CTNAG 7 cut(s) 300, 657, 1124, 1164, 1206, 1212, 1292
DpnI GATC 3 cut(s) 942, 1114, 1122
DpnII GATC 3 cut(s) 940, 1112, 1120
DraIII CACNNNGTG 1 cut(s) 577
EaeI YGGCCR 1 cut(s) 513
Eam1104I CTCTTC 2 cut(s) 493, 630
EarI CTCTTC 2 cut(s) 493, 630
Ecl136II GAGCTC 1 cut(s) 244
Eco130I CCWWGG 1 cut(s) 1219
Eco24I GRGCYC 1 cut(s) 246
Eco47I GGWCC 2 cut(s) 491, 1346
Eco53kI GAGCTC 1 cut(s) 244
Eco57I CTGAAG 2 cut(s) 711, 1158
EcoICRI GAGCTC 1 cut(s) 244
EcoO109I RGGNCCY 2 cut(s) 616, 1346
EcoRII CCWGG 5 cut(s) 463, 493, 612, 717, 1108
EcoT14I CCWWGG 1 cut(s) 1219
EcoT38I GRGCYC 1 cut(s) 246
ErhI CCWWGG 1 cut(s) 1219
FaqI GGGAC 2 cut(s) 161, 1412
FauI CCCGC 1 cut(s) 217
FbaI TGATCA 1 cut(s) 940
Fnu4HI GCNGC 2 cut(s) 461, 904
FokI GGATG 1 cut(s) 839
FriOI GRGCYC 1 cut(s) 246
Fsp4HI GCNGC 2 cut(s) 461, 904
FspBI CTAG 3 cut(s) 479, 488, 1100
GlaI GCGC 1 cut(s) 213
GluI GCNGC 2 cut(s) 461, 904
GsaI CCCAGC 1 cut(s) 339
GsuI CTGGAG 1 cut(s) 590
HaeIII GGCC 5 cut(s) 195, 285, 515, 617, 1197
HapII CCGG 3 cut(s) 48, 192, 369
HgaI GACGC 1 cut(s) 522
HhaI GCGC 1 cut(s) 214
Hin6I GCGC 1 cut(s) 212
HinP1I GCGC 1 cut(s) 212
HincII GTYRAC 2 cut(s) 975, 1093
HindII GTYRAC 2 cut(s) 975, 1093
HindIII AAGCTT 3 cut(s) 24, 935, 1170
HinfI GANTC 6 cut(s) 136, 236, 557, 839, 976, 1286
HpaII CCGG 3 cut(s) 48, 192, 369
HphI GGTGA 4 cut(s) 66, 376, 386, 1337
Hpy166II GTNNAC 5 cut(s) 98, 571, 975, 1093, 1405
Hpy188I TCNGA 9 cut(s) 235, 241, 792, 1006, 1041, 1057, 1077, 1244, 1370
Hpy188III TCNNGA 4 cut(s) 729, 1100, 1176, 1349
Hpy8I GTNNAC 5 cut(s) 98, 571, 975, 1093, 1405
Hpy99I CGWCG 1 cut(s) 42
HpyAV CCTTC 4 cut(s) 530, 735, 1316, 1345
HpyCH4III ACNGT 3 cut(s) 353, 670, 1061
HpyCH4IV ACGT 1 cut(s) 1134
HpyCH4V TGCA 9 cut(s) 201, 565, 585, 593, 833, 906, 962, 1066, 1269
HpyF10VI GCNNNNNNNGC 4 cut(s) 250, 457, 653, 1169
HpyF3I CTNAG 7 cut(s) 300, 657, 1124, 1164, 1206, 1212, 1292
HpySE526I ACGT 1 cut(s) 1134
HspAI GCGC 1 cut(s) 212
KpnI GGTACC 1 cut(s) 1380
Ksp22I TGATCA 1 cut(s) 940
KspI CCGCGG 1 cut(s) 280
Kzo9I GATC 3 cut(s) 940, 1112, 1120
LmnI GCTCC 5 cut(s) 194, 365, 448, 609, 1336
Lsp1109I GCAGC 2 cut(s) 472, 890
LweI GCATC 3 cut(s) 273, 757, 971
MabI ACCWGGT 1 cut(s) 717
MaeI CTAG 3 cut(s) 479, 488, 1100
MaeII ACGT 1 cut(s) 1134
MaeIII GTNAC 1 cut(s) 1257
MalI GATC 3 cut(s) 942, 1114, 1122
MbiI CCGCTC 1 cut(s) 189
MboI GATC 3 cut(s) 940, 1112, 1120
MhlI GDGCHC 3 cut(s) 55, 246, 1021
MluCI AATT 6 cut(s) 785, 996, 1026, 1071, 1237, 1280
MlyI GAGTC 3 cut(s) 130, 230, 970
MmeI TCCRAC 2 cut(s) 258, 1297
MroXI GAANNNNTTC 2 cut(s) 1000, 1359
MseI TTAA 1 cut(s) 543
MslI CAYNNNNRTG 2 cut(s) 219, 1370
MspA1I CMGCKG 2 cut(s) 279, 1118
MspI CCGG 3 cut(s) 48, 192, 369
MspR9I CCNGG 5 cut(s) 465, 495, 614, 719, 1110
Mva1269I GAATGC 2 cut(s) 214, 1156
MvaI CCWGG 5 cut(s) 465, 495, 614, 719, 1110
MvnI CGCG 2 cut(s) 212, 279
MwoI GCNNNNNNNGC 4 cut(s) 250, 457, 653, 1169
NdeII GATC 3 cut(s) 940, 1112, 1120
NlaIV GGNNCC 6 cut(s) 52, 367, 723, 1332, 1347, 1378
NspI RCATGY 2 cut(s) 569, 707
PaeI GCATGC 1 cut(s) 707
PctI GAATGC 2 cut(s) 214, 1156
PdmI GAANNNNTTC 2 cut(s) 1000, 1359
PfeI GAWTC 3 cut(s) 557, 839, 1286
PfoI TCCNGGA 2 cut(s) 493, 1108
PkrI GCNGC 2 cut(s) 462, 905
PleI GAGTC 3 cut(s) 130, 230, 970
PpsI GAGTC 3 cut(s) 130, 230, 970
PpuMI RGGWCCY 1 cut(s) 1346
Psp124BI GAGCTC 1 cut(s) 246
Psp5II RGGWCCY 1 cut(s) 1346
Psp6I CCWGG 5 cut(s) 463, 493, 612, 717, 1108
PspFI CCCAGC 1 cut(s) 335
PspGI CCWGG 5 cut(s) 463, 493, 612, 717, 1108
PspN4I GGNNCC 6 cut(s) 52, 367, 723, 1332, 1347, 1378
PspPI GGNCC 5 cut(s) 284, 491, 616, 1196, 1346
PspPPI RGGWCCY 1 cut(s) 1346
PstI CTGCAG 1 cut(s) 1068
PstNI CAGNNNCTG 1 cut(s) 619
PvuII CAGCTG 1 cut(s) 1118
RsaI GTAC 2 cut(s) 570, 1378
RsaNI GTAC 2 cut(s) 569, 1377
RseI CAYNNNNRTG 2 cut(s) 219, 1370
SacI GAGCTC 1 cut(s) 246
SacII CCGCGG 1 cut(s) 280
SaqAI TTAA 1 cut(s) 543
SatI GCNGC 2 cut(s) 461, 904
Sau3AI GATC 3 cut(s) 940, 1112, 1120
Sau96I GGNCC 5 cut(s) 284, 491, 616, 1196, 1346
SchI GAGTC 3 cut(s) 130, 230, 970
ScrFI CCNGG 5 cut(s) 465, 495, 614, 719, 1110
SduI GDGCHC 3 cut(s) 55, 246, 1021
SexAI ACCWGGT 1 cut(s) 717
SfaNI GCATC 3 cut(s) 273, 757, 971
SfcI CTRYAG 1 cut(s) 1064
Sfr303I CCGCGG 1 cut(s) 280
SgrBI CCGCGG 1 cut(s) 280
SinI GGWCC 2 cut(s) 491, 1346
SmiMI CAYNNNNRTG 2 cut(s) 219, 1370
SphI GCATGC 1 cut(s) 707
Sse9I AATT 6 cut(s) 785, 996, 1026, 1071, 1237, 1280
SsiI CCGC 4 cut(s) 187, 210, 277, 279
SspMI CTAG 3 cut(s) 479, 488, 1100
SstI GAGCTC 1 cut(s) 246
StyD4I CCNGG 5 cut(s) 463, 493, 612, 717, 1108
StyI CCWWGG 1 cut(s) 1219
TaaI ACNGT 3 cut(s) 353, 670, 1061
TaiI ACGT 1 cut(s) 1137
TaqI TCGA 2 cut(s) 183, 714
TasI AATT 6 cut(s) 785, 996, 1026, 1071, 1237, 1280
TatI WGTACW 1 cut(s) 568
TfiI GAWTC 3 cut(s) 557, 839, 1286
Tru1I TTAA 1 cut(s) 543
Tru9I TTAA 1 cut(s) 543
TscAI CASTG 2 cut(s) 559, 1132
TseI GCWGC 2 cut(s) 460, 903
TspDTI ATGAA 6 cut(s) 237, 362, 488, 648, 770, 1181
TspGWI ACGGA 2 cut(s) 839, 1286
TspRI CASTG 2 cut(s) 559, 1132
VpaK11BI GGWCC 2 cut(s) 491, 1346
XapI RAATTY 1 cut(s) 1237
XbaI TCTAGA 1 cut(s) 1099
XceI RCATGY 2 cut(s) 569, 707
XmnI GAANNNNTTC 2 cut(s) 1000, 1359
XspI CTAG 3 cut(s) 479, 488, 1100
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.