Rorug03G0277400

Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH ubiquinone oxidoreductase complex (complex I)

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Forward (+)
27437171 .. 27438507
1337 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0277400.1

Sequence Viewer

Length: 744 bp
ATGTTCACGGCAGGAGCATGTGAGGTTGATGCTTTGAATACTACTCTTAATGCTATCCAACCCCGAGTTACTGAAGCAATGAATCAGCAACTATGTGCTCCCTATTCTGCAGATGAAGTACGGATTGCGTTATTTCAAATGTATCTAACAAAATCATCGGGCCCTGATGGTGCTGAGGGTTTTTCTGCATTGTTGCACCAGAGGGCAGCGATGGAAACATTATCGGGTATAGCTATCTGTCCTGAAGCTCCTCAAATTAATCACCTGCTCTTTGCGGATGACAGTATGCTTTATGCTCAAGCCTCTGTTGAAGCTTGTAATCAGATTAAAGATGTACTTCGAATTTATGAGATGGCGTGTGGTCAGAAGGTAAATTTTTCTAAGAGTATTGTTACTTTTAGTAAAAATGTTATAGAAGCTTTACAGGGTGAGATTGCAGAGTTGTTGAATGTGGTGGTGGTGGAGTCCCACGAAATTTTTTTAGGGCTACCTACATATGTTGGGAGAGCTAAAACTGCAACCTTCCAGTATATTAAAGAACGGCTTGGGAAGAAGTTGGAGGGTTGGCAAGGGAAATGCTTGACTGGGGCTGGAAAAGATATTCTCATTAGGGTGGTTGCTCAATCACTCCCTACGTATGCTATGAGTTGCTTTGAACTCACAAAGAATTTTTGTGATGATTTGCAGCAGATGTGTGCCAAATTTTGGTGGGGGAGTACGGAGGATAAAAGAAAAATTCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

247

Amino Acids

27.32

Weight (kDa)

5.64

Isoelectric Point (pI)

36.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 273
Acc36I ACCTGC 1 cut(s) 273
AccB7I CCANNNNNTGG 1 cut(s) 705
AciI CCGC 1 cut(s) 275
AcsI RAATTY 6 cut(s) 342, 373, 474, 667, 701, 735
AcuI CTGAAG 2 cut(s) 93, 264
AfaI GTAC 3 cut(s) 120, 336, 718
AfiI CCNNNNNNNGG 1 cut(s) 705
AgsI TTSAA 5 cut(s) 37, 137, 311, 448, 656
AluBI AGCT 5 cut(s) 233, 248, 314, 419, 509
AluI AGCT 5 cut(s) 233, 248, 314, 419, 509
Alw21I GWGCWC 1 cut(s) 100
Ama87I CYCGRG 1 cut(s) 63
AoxI GGCC 1 cut(s) 160
ApaI GGGCCC 1 cut(s) 164
ApeKI GCWGC 2 cut(s) 206, 685
ApoI RAATTY 6 cut(s) 342, 373, 474, 667, 701, 735
AseI ATTAAT 1 cut(s) 258
AspS9I GGNCC 2 cut(s) 160, 161
AsuHPI GGTGA 2 cut(s) 254, 440
AsuII TTCGAA 1 cut(s) 340
AvaI CYCGRG 1 cut(s) 63
BaeGI GKGCMC 1 cut(s) 164
BanII GRGCYC 1 cut(s) 164
Bbv12I GWGCWC 1 cut(s) 100
BbvCI CCTCAGC 1 cut(s) 174
BbvI GCAGC 2 cut(s) 218, 697
BccI CCATC 3 cut(s) 161, 205, 346
BceAI ACGGC 2 cut(s) 24, 557
BfaI CTAG 1 cut(s) 742
BfmI CTRYAG 1 cut(s) 108
BfuAI ACCTGC 1 cut(s) 273
BisI GCNGC 2 cut(s) 207, 686
BlsI GCNGC 2 cut(s) 208, 687
BmeT110I CYCGRG 1 cut(s) 63
BmgT120I GGNCC 2 cut(s) 160, 161
BmiI GGNNCC 1 cut(s) 162
BmrI ACTGGG 1 cut(s) 594
BmsI GCATC 1 cut(s) 19
BmuI ACTGGG 1 cut(s) 594
Bpu10I CCTNAGC 1 cut(s) 174
Bpu14I TTCGAA 1 cut(s) 340
BpuEI CTTGAG 1 cut(s) 282
BsaAI YACGTR 1 cut(s) 636
Bsc4I CCNNNNNNNGG 1 cut(s) 705
Bse1I ACTGG 2 cut(s) 526, 589
Bse3DI GCAATG 1 cut(s) 84
BseGI GGATG 1 cut(s) 283
BseLI CCNNNNNNNGG 1 cut(s) 705
BseMI GCAATG 1 cut(s) 84
BseMII CTCAG 1 cut(s) 165
BseNI ACTGG 2 cut(s) 526, 589
BseRI GAGGAG 1 cut(s) 240
BseSI GKGCMC 1 cut(s) 164
BseXI GCAGC 2 cut(s) 218, 697
BshFI GGCC 1 cut(s) 162
BsiHKAI GWGCWC 1 cut(s) 100
BsiHKCI CYCGRG 1 cut(s) 63
BslFI GGGAC 1 cut(s) 451
BslI CCNNNNNNNGG 1 cut(s) 705
BsmFI GGGAC 1 cut(s) 451
BsnI GGCC 1 cut(s) 162
BsoBI CYCGRG 1 cut(s) 63
Bsp119I TTCGAA 1 cut(s) 340
Bsp120I GGGCCC 1 cut(s) 160
Bsp1286I GDGCHC 2 cut(s) 100, 164
BspACI CCGC 1 cut(s) 275
BspANI GGCC 1 cut(s) 162
BspCNI CTCAG 1 cut(s) 166
BspLI GGNNCC 1 cut(s) 162
BspMAI CTGCAG 1 cut(s) 112
BspMI ACCTGC 1 cut(s) 273
BspT104I TTCGAA 1 cut(s) 340
BsrDI GCAATG 1 cut(s) 84
BsrI ACTGG 2 cut(s) 526, 589
Bst4CI ACNGT 1 cut(s) 284
BstBAI YACGTR 1 cut(s) 636
BstBI TTCGAA 1 cut(s) 340
BstDEI CTNAG 2 cut(s) 174, 381
BstF5I GGATG 1 cut(s) 283
BstMWI GCNNNNNNNGC 1 cut(s) 515
BstNSI RCATGY 1 cut(s) 21
BstSFI CTRYAG 1 cut(s) 108
BstSLI GKGCMC 1 cut(s) 164
BstSNI TACGTA 1 cut(s) 636
BstV1I GCAGC 2 cut(s) 218, 697
BsuRI GGCC 1 cut(s) 162
BtgZI GCGATG 1 cut(s) 224
BtsCI GGATG 1 cut(s) 283
BveI ACCTGC 1 cut(s) 273
Cfr13I GGNCC 2 cut(s) 160, 161
Csp6I GTAC 3 cut(s) 119, 335, 717
CviAII CATG 1 cut(s) 18
CviQI GTAC 3 cut(s) 119, 335, 717
DdeI CTNAG 2 cut(s) 174, 381
Eco105I TACGTA 1 cut(s) 636
Eco24I GRGCYC 1 cut(s) 164
Eco57I CTGAAG 2 cut(s) 93, 264
Eco88I CYCGRG 1 cut(s) 63
EcoO109I RGGNCCY 1 cut(s) 161
EcoT38I GRGCYC 1 cut(s) 164
FaeI CATG 1 cut(s) 21
FalI AAGNNNNNCTT 4 cut(s) 321, 353, 528, 560
FaqI GGGAC 1 cut(s) 451
FatI CATG 1 cut(s) 17
FauNDI CATATG 1 cut(s) 496
Fnu4HI GCNGC 2 cut(s) 207, 686
FokI GGATG 1 cut(s) 290
FriOI GRGCYC 1 cut(s) 164
Fsp4HI GCNGC 2 cut(s) 207, 686
FspBI CTAG 1 cut(s) 742
GluI GCNGC 2 cut(s) 207, 686
HaeIII GGCC 1 cut(s) 162
Hin1II CATG 1 cut(s) 21
HindIII AAGCTT 2 cut(s) 312, 417
HinfI GANTC 2 cut(s) 82, 464
HphI GGTGA 2 cut(s) 254, 440
Hpy166II GTNNAC 1 cut(s) 6
Hpy188I TCNGA 2 cut(s) 324, 366
Hpy188III TCNNGA 1 cut(s) 242
Hpy8I GTNNAC 1 cut(s) 6
HpyAV CCTTC 2 cut(s) 361, 532
HpyCH4III ACNGT 1 cut(s) 284
HpyCH4IV ACGT 1 cut(s) 635
HpyCH4V TGCA 6 cut(s) 110, 188, 196, 437, 518, 685
HpyF10VI GCNNNNNNNGC 1 cut(s) 515
HpyF3I CTNAG 2 cut(s) 174, 381
HpySE526I ACGT 1 cut(s) 635
Hsp92II CATG 1 cut(s) 21
LmnI GCTCC 3 cut(s) 14, 103, 253
LpnPI CCDG 8 cut(s) 177, 212, 255, 278, 410, 539, 570, 576
Lsp1109I GCAGC 2 cut(s) 218, 697
LweI GCATC 1 cut(s) 19
MaeI CTAG 1 cut(s) 742
MaeII ACGT 1 cut(s) 635
MaeIII GTNAC 2 cut(s) 67, 391
MboII GAAGA 1 cut(s) 562
MhlI GDGCHC 2 cut(s) 100, 164
MluCI AATT 7 cut(s) 255, 342, 373, 474, 667, 701, 735
MlyI GAGTC 1 cut(s) 473
MmeI TCCRAC 2 cut(s) 82, 537
MnlI CCTC 7 cut(s) 16, 169, 195, 261, 313, 553, 715
MseI TTAA 4 cut(s) 48, 258, 327, 534
MslI CAYNNNNRTG 1 cut(s) 611
MwoI GCNNNNNNNGC 1 cut(s) 515
NdeI CATATG 1 cut(s) 496
NlaIII CATG 1 cut(s) 21
NlaIV GGNNCC 1 cut(s) 162
NspI RCATGY 1 cut(s) 21
NspV TTCGAA 1 cut(s) 340
PaqCI CACCTGC 1 cut(s) 273
PfeI GAWTC 1 cut(s) 82
PflMI CCANNNNNTGG 1 cut(s) 705
PkrI GCNGC 2 cut(s) 208, 687
PleI GAGTC 1 cut(s) 472
PpsI GAGTC 1 cut(s) 472
Ppu21I YACGTR 1 cut(s) 636
PshBI ATTAAT 1 cut(s) 258
PspN4I GGNNCC 1 cut(s) 162
PspOMI GGGCCC 1 cut(s) 160
PspPI GGNCC 2 cut(s) 160, 161
PstI CTGCAG 1 cut(s) 112
RsaI GTAC 3 cut(s) 120, 336, 718
RsaNI GTAC 3 cut(s) 119, 335, 717
RseI CAYNNNNRTG 1 cut(s) 611
SaqAI TTAA 4 cut(s) 48, 258, 327, 534
SatI GCNGC 2 cut(s) 207, 686
Sau96I GGNCC 2 cut(s) 160, 161
SchI GAGTC 1 cut(s) 473
SduI GDGCHC 2 cut(s) 100, 164
SfaNI GCATC 1 cut(s) 19
SfcI CTRYAG 1 cut(s) 108
SfuI TTCGAA 1 cut(s) 340
SmiMI CAYNNNNRTG 1 cut(s) 611
SmlI CTYRAG 1 cut(s) 297
SmoI CTYRAG 1 cut(s) 297
SnaBI TACGTA 1 cut(s) 636
Sse9I AATT 7 cut(s) 255, 342, 373, 474, 667, 701, 735
SsiI CCGC 1 cut(s) 275
SspMI CTAG 1 cut(s) 742
TaaI ACNGT 1 cut(s) 284
TaiI ACGT 1 cut(s) 638
TaqI TCGA 1 cut(s) 340
TasI AATT 7 cut(s) 255, 342, 373, 474, 667, 701, 735
TatI WGTACW 1 cut(s) 334
TfiI GAWTC 1 cut(s) 82
Tru1I TTAA 4 cut(s) 48, 258, 327, 534
Tru9I TTAA 4 cut(s) 48, 258, 327, 534
TseI GCWGC 2 cut(s) 206, 685
TspDTI ATGAA 2 cut(s) 95, 129
TspGWI ACGGA 2 cut(s) 136, 734
Van91I CCANNNNNTGG 1 cut(s) 705
VspI ATTAAT 1 cut(s) 258
XapI RAATTY 6 cut(s) 342, 373, 474, 667, 701, 735
XceI RCATGY 1 cut(s) 21
XspI CTAG 1 cut(s) 742
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.