Rh2DG633400

Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH ubiquinone oxidoreductase complex (complex I)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0005361
Physical Location & Seq
Forward (+)
86224857 .. 86227606
2750 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG633400.1

Sequence Viewer

Length: 1422 bp
ATGTTGAGACGACTACTCCTACAAGCTTCCACTACTCGTCGCCTTGCCGGTGCCCACTTCACTCCACCAGCTTCATCTCCTTTACTTCGTTATCGTCCACTTTCTTCTTCTTCAACCCAAATCCCAGAGAGTCATTTGGAGGACAACCCTGACCAACCCTCTGCCACCATCTCCATCGACCGCTCCGGCCTTTGCAATCCCCCCGCGCATTCCCATGAACCCTGTTCCGACTCCGAGCTCGTCAAGCACCTCAAAGGCATCATCAAGTTCCGCGGTGGCCCAATCTCGGTGGCTGAGTATATGGAGGAGGTTTTGACGAACCCGAAAGCTGGGTTCTACATGAACCGTGATGTTTTTGGAGCCGGAGGTGATTTTATCACCTCCCCAGAAGTGAGCCAGATGTTCGGGGAGATGGTTGGTGTTTGGGCGATGTCTCTGTGGGAGCAGATGGGGCAGCCAGGAAAAATGAACCTAGTAGAGCTAGGTCCAGGAAGAGGAACTCTCATGGCCGACCTTCTTCGGGGTGCGTCCAAGTTTAACAACTTCACTGAATCGTTGCATGTACACATGGTGGAGTGCAGTCCTGCATTACAGAAGCTCCAGCACCAGGCCCTGAAATGTGTGGATGAAGAGGGTACGGCTGAGAAAAGGACTGTCAGCACTTTGGCTAAAACTCCTGTGTCATGGCATGCCACATTCGACCAGGTTCCTTCAGGATTGCCATCTATTATCATCGCCCATGAGTTTTATGATGCTTTACCAGTTCATCAATTTCAGAGGGCTTCTCGTGGCTGGTGTGAGAAAATGGTGGATGTTGCAGAAGATTCAAAGTTCCGTTTTGTTCTTTCTTCACAGCCTACACCAGCAACGCTTTATCTGGCAAAACGCTGCAAATGGGCTGGAATGGAAGAAATAGCGAAGCTTGATCATGTTGAGGTTTGCCCTGCATCAATGGAGTTGACTCAAAGTATTGCTGATAGAATTGCTTCTGATGGGGGTGGTGCTCTTGTAATTGATTATGGTCAGAATGGAGTAGTCTCTGACAGTCTACAGGCAATTCGGAAACATAAGTTTGTTGACATTCTAGACGATCCAGGATCAGCTGATCTCAGTGCCTACGTTGACTTTGCTTCCATCAGGCATTCTGCTGAGGAAGCTTCGGGAGATGTGTCTGTTCATGGCCCTATTACTCAGTCTCAGTTCCTTGGCTCTCTTGGGATAAATTTCCGAGTGGAAGCATTATTACAGAACTGCACGGAGGAACAATTTGAATCTCTCAGGTCAGGGTATTGGCAACTGGTTGGAGAAGGTGAGGCTCCCTTCTGGGAGGGTCCTGACGAAAAAGTTCCCATCGGAATGGGTACCCGTTATTTGGTAATGGCTATTGTGAACAAGAAGCATGGTGTTCCAGTCCCATTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04714 map04714
Pfam Domains
Protein Families
Methyltransf_28

Protein Analysis

473

Amino Acids

51.82

Weight (kDa)

5.54

Isoelectric Point (pI)

49.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_28 PF02636 138 - 395 1.5e-64 Putative S-adenosyl-L-methionine-dependent methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1361
AccB1I GGYRCC 2 cut(s) 50, 1361
AccBSI CCGCTC 1 cut(s) 183
AccI GTMKAC 1 cut(s) 1048
AccII CGCG 2 cut(s) 206, 273
AciI CCGC 4 cut(s) 181, 204, 271, 273
AclWI GGATC 2 cut(s) 1085, 1105
AcoI YGGCCR 1 cut(s) 507
AcsI RAATTY 1 cut(s) 1222
AcuI CTGAAG 1 cut(s) 696
AdeI CACNNNGTG 1 cut(s) 571
AfaI GTAC 3 cut(s) 564, 637, 1363
AfiI CCNNNNNNNGG 6 cut(s) 286, 329, 494, 520, 607, 1372
AgsI TTSAA 3 cut(s) 114, 828, 1271
AjnI CCWGG 5 cut(s) 457, 487, 606, 702, 1093
AluBI AGCT 9 cut(s) 26, 71, 238, 329, 481, 598, 922, 1103, 1157
AluI AGCT 9 cut(s) 26, 71, 238, 329, 481, 598, 922, 1103, 1157
Alw21I GWGCWC 2 cut(s) 240, 1006
Alw26I GTCTC 3 cut(s) 438, 1042, 1200
AlwI GGATC 2 cut(s) 1085, 1105
AlwNI CAGNNNCTG 1 cut(s) 613
AoxI GGCC 5 cut(s) 187, 277, 507, 609, 1180
ApeKI GCWGC 2 cut(s) 454, 888
ApoI RAATTY 1 cut(s) 1222
Asp700I GAANNNNTTC 2 cut(s) 985, 1344
Asp718I GGTACC 1 cut(s) 1361
AspLEI GCGC 1 cut(s) 208
AspS9I GGNCC 5 cut(s) 278, 485, 610, 1181, 1331
AsuHPI GGTGA 3 cut(s) 370, 380, 1322
AvaII GGWCC 2 cut(s) 485, 1331
BaeGI GKGCMC 1 cut(s) 55
BanI GGYRCC 2 cut(s) 50, 1361
BanII GRGCYC 1 cut(s) 240
BarI GAAGNNNNNNTAC 2 cut(s) 1227, 1259
BauI CACGAG 1 cut(s) 786
Bbv12I GWGCWC 2 cut(s) 240, 1006
BbvCI CCTCAGC 1 cut(s) 1149
BbvI GCAGC 2 cut(s) 466, 875
BccI CCATC 8 cut(s) 176, 182, 406, 442, 730, 986, 1142, 1358
BceAI ACGGC 1 cut(s) 654
BciT130I CCWGG 5 cut(s) 459, 489, 608, 704, 1095
BclI TGATCA 1 cut(s) 925
BcoDI GTCTC 3 cut(s) 438, 1042, 1200
BfaI CTAG 3 cut(s) 473, 482, 1085
BfmI CTRYAG 1 cut(s) 1049
BisI GCNGC 2 cut(s) 455, 889
BlsI GCNGC 2 cut(s) 456, 890
Bme1390I CCNGG 5 cut(s) 459, 489, 608, 704, 1095
Bme18I GGWCC 2 cut(s) 485, 1331
BmgT120I GGNCC 5 cut(s) 278, 485, 610, 1181, 1331
BmiI GGNNCC 6 cut(s) 52, 361, 708, 1317, 1332, 1363
BmrFI CCNGG 5 cut(s) 459, 489, 608, 704, 1095
BmsI GCATC 3 cut(s) 267, 742, 956
BplI GAGNNNNNCTC 4 cut(s) 486, 518, 769, 801
BpmI CTGGAG 1 cut(s) 584
Bpu10I CCTNAGC 1 cut(s) 1149
BsaBI GATNNNNATC 1 cut(s) 721
BsaJI CCNNGG 2 cut(s) 271, 1204
BsaXI ACNNNNNCTCC 3 cut(s) 30, 582, 612
Bsc4I CCNNNNNNNGG 6 cut(s) 286, 329, 494, 520, 607, 1372
Bse118I RCCGGY 1 cut(s) 47
Bse1I ACTGG 3 cut(s) 761, 1302, 1409
Bse8I GATNNNNATC 1 cut(s) 721
BseBI CCWGG 5 cut(s) 459, 489, 608, 704, 1095
BseDI CCNNGG 2 cut(s) 271, 1204
BseGI GGATG 2 cut(s) 631, 817
BseJI GATNNNNATC 1 cut(s) 721
BseLI CCNNNNNNNGG 6 cut(s) 286, 329, 494, 520, 607, 1372
BseMII CTCAG 7 cut(s) 285, 633, 1123, 1140, 1205, 1211, 1291
BseNI ACTGG 3 cut(s) 761, 1302, 1409
BseRI GAGGAG 1 cut(s) 320
BseSI GKGCMC 1 cut(s) 55
BseXI GCAGC 2 cut(s) 466, 875
BseYI CCCAGC 1 cut(s) 329
BsgI GTGCAG 2 cut(s) 598, 1237
Bsh1236I CGCG 2 cut(s) 206, 273
Bsh1285I CGRYCG 1 cut(s) 181
BshFI GGCC 5 cut(s) 189, 279, 509, 611, 1182
BshNI GGYRCC 2 cut(s) 50, 1361
BsiEI CGRYCG 1 cut(s) 181
BsiHKAI GWGCWC 2 cut(s) 240, 1006
BsiSI CCGG 3 cut(s) 48, 186, 363
BslFI GGGAC 1 cut(s) 1397
BslI CCNNNNNNNGG 6 cut(s) 286, 329, 494, 520, 607, 1372
BsmAI GTCTC 3 cut(s) 438, 1042, 1200
BsmFI GGGAC 1 cut(s) 1397
BsmI GAATGC 2 cut(s) 208, 1141
BsnI GGCC 5 cut(s) 189, 279, 509, 611, 1182
Bsp1286I GDGCHC 3 cut(s) 55, 240, 1006
Bsp1407I TGTACA 1 cut(s) 562
Bsp143I GATC 4 cut(s) 925, 1090, 1097, 1105
BspACI CCGC 4 cut(s) 181, 204, 271, 273
BspANI GGCC 5 cut(s) 189, 279, 509, 611, 1182
BspCNI CTCAG 7 cut(s) 286, 634, 1122, 1141, 1204, 1210, 1290
BspFNI CGCG 2 cut(s) 206, 273
BspLI GGNNCC 6 cut(s) 52, 361, 708, 1317, 1332, 1363
BspPI GGATC 2 cut(s) 1085, 1105
BspT107I GGYRCC 2 cut(s) 50, 1361
BsrBI CCGCTC 1 cut(s) 183
BsrFI RCCGGY 1 cut(s) 47
BsrGI TGTACA 1 cut(s) 562
BsrI ACTGG 3 cut(s) 761, 1302, 1409
BssAI RCCGGY 1 cut(s) 47
BssECI CCNNGG 2 cut(s) 271, 1204
BssMI GATC 4 cut(s) 925, 1090, 1097, 1105
BssSI CACGAG 1 cut(s) 786
BssT1I CCWWGG 1 cut(s) 1204
Bst2BI CACGAG 1 cut(s) 786
Bst2UI CCWGG 5 cut(s) 459, 489, 608, 704, 1095
Bst4CI ACNGT 3 cut(s) 347, 655, 1046
Bst6I CTCTTC 2 cut(s) 487, 624
BstAUI TGTACA 1 cut(s) 562
BstC8I GCNNGC 1 cut(s) 690
BstDEI CTNAG 7 cut(s) 294, 642, 1109, 1149, 1191, 1197, 1277
BstDSI CCRYGG 1 cut(s) 271
BstF5I GGATG 2 cut(s) 631, 817
BstFNI CGCG 2 cut(s) 206, 273
BstHHI GCGC 1 cut(s) 208
BstKTI GATC 4 cut(s) 928, 1093, 1100, 1108
BstMAI GTCTC 3 cut(s) 438, 1042, 1200
BstMBI GATC 4 cut(s) 925, 1090, 1097, 1105
BstMCI CGRYCG 1 cut(s) 181
BstMWI GCNNNNNNNGC 3 cut(s) 244, 451, 1154
BstNI CCWGG 5 cut(s) 459, 489, 608, 704, 1095
BstNSI RCATGY 2 cut(s) 563, 692
BstSCI CCNGG 5 cut(s) 457, 487, 606, 702, 1093
BstSFI CTRYAG 1 cut(s) 1049
BstSLI GKGCMC 1 cut(s) 55
BstUI CGCG 2 cut(s) 206, 273
BstV1I GCAGC 2 cut(s) 466, 875
BstXI CCANNNNNNTGG 1 cut(s) 1357
BsuRI GGCC 5 cut(s) 189, 279, 509, 611, 1182
BtgI CCRYGG 1 cut(s) 271
BtgZI GCGATG 2 cut(s) 443, 718
BtsCI GGATG 2 cut(s) 631, 817
BtsIMutI CAGTG 2 cut(s) 546, 1117
Cac8I GCNNGC 1 cut(s) 690
CaiI CAGNNNCTG 1 cut(s) 613
CfoI GCGC 1 cut(s) 208
Cfr10I RCCGGY 1 cut(s) 47
Cfr13I GGNCC 5 cut(s) 278, 485, 610, 1181, 1331
Cfr42I CCGCGG 1 cut(s) 274
CseI GACGC 1 cut(s) 516
CsiI ACCWGGT 1 cut(s) 702
Csp6I GTAC 3 cut(s) 563, 636, 1362
CspCI CAANNNNNGTGG 2 cut(s) 270, 305
CviQI GTAC 3 cut(s) 563, 636, 1362
DdeI CTNAG 7 cut(s) 294, 642, 1109, 1149, 1191, 1197, 1277
DpnI GATC 4 cut(s) 927, 1092, 1099, 1107
DpnII GATC 4 cut(s) 925, 1090, 1097, 1105
DraIII CACNNNGTG 1 cut(s) 571
EaeI YGGCCR 1 cut(s) 507
Eam1104I CTCTTC 2 cut(s) 487, 624
EarI CTCTTC 2 cut(s) 487, 624
Ecl136II GAGCTC 1 cut(s) 238
Eco130I CCWWGG 1 cut(s) 1204
Eco24I GRGCYC 1 cut(s) 240
Eco47I GGWCC 2 cut(s) 485, 1331
Eco53kI GAGCTC 1 cut(s) 238
Eco57I CTGAAG 1 cut(s) 696
EcoICRI GAGCTC 1 cut(s) 238
EcoO109I RGGNCCY 2 cut(s) 610, 1331
EcoRII CCWGG 5 cut(s) 457, 487, 606, 702, 1093
EcoT14I CCWWGG 1 cut(s) 1204
EcoT38I GRGCYC 1 cut(s) 240
ErhI CCWWGG 1 cut(s) 1204
FaqI GGGAC 1 cut(s) 1397
FauI CCCGC 1 cut(s) 211
FbaI TGATCA 1 cut(s) 925
FblI GTMKAC 1 cut(s) 1048
Fnu4HI GCNGC 2 cut(s) 455, 889
FokI GGATG 2 cut(s) 638, 824
FriOI GRGCYC 1 cut(s) 240
Fsp4HI GCNGC 2 cut(s) 455, 889
FspBI CTAG 3 cut(s) 473, 482, 1085
GlaI GCGC 1 cut(s) 207
GluI GCNGC 2 cut(s) 455, 889
GsaI CCCAGC 1 cut(s) 333
GsuI CTGGAG 1 cut(s) 584
HaeIII GGCC 5 cut(s) 189, 279, 509, 611, 1182
HapII CCGG 3 cut(s) 48, 186, 363
HgaI GACGC 1 cut(s) 516
HhaI GCGC 1 cut(s) 208
Hin6I GCGC 1 cut(s) 206
HinP1I GCGC 1 cut(s) 206
HincII GTYRAC 3 cut(s) 960, 1078, 1123
HindII GTYRAC 3 cut(s) 960, 1078, 1123
HindIII AAGCTT 3 cut(s) 24, 920, 1155
HinfI GANTC 6 cut(s) 130, 230, 551, 824, 961, 1271
HpaII CCGG 3 cut(s) 48, 186, 363
HphI GGTGA 3 cut(s) 370, 380, 1322
Hpy166II GTNNAC 7 cut(s) 98, 565, 960, 1049, 1078, 1123, 1390
Hpy188I TCNGA 9 cut(s) 229, 235, 777, 991, 1026, 1042, 1062, 1229, 1355
Hpy188III TCNNGA 4 cut(s) 714, 1085, 1161, 1334
Hpy8I GTNNAC 7 cut(s) 98, 565, 960, 1049, 1078, 1123, 1390
Hpy99I CGWCG 1 cut(s) 42
HpyAV CCTTC 4 cut(s) 524, 720, 1301, 1330
HpyCH4III ACNGT 3 cut(s) 347, 655, 1046
HpyCH4IV ACGT 1 cut(s) 1119
HpyCH4V TGCA 8 cut(s) 195, 559, 579, 587, 818, 891, 947, 1254
HpyF10VI GCNNNNNNNGC 3 cut(s) 244, 451, 1154
HpyF3I CTNAG 7 cut(s) 294, 642, 1109, 1149, 1191, 1197, 1277
HpySE526I ACGT 1 cut(s) 1119
HspAI GCGC 1 cut(s) 206
KpnI GGTACC 1 cut(s) 1365
Ksp22I TGATCA 1 cut(s) 925
KspI CCGCGG 1 cut(s) 274
Kzo9I GATC 4 cut(s) 925, 1090, 1097, 1105
LmnI GCTCC 5 cut(s) 188, 359, 442, 603, 1321
Lsp1109I GCAGC 2 cut(s) 466, 875
LweI GCATC 3 cut(s) 267, 742, 956
MabI ACCWGGT 1 cut(s) 702
MaeI CTAG 3 cut(s) 473, 482, 1085
MaeII ACGT 1 cut(s) 1119
MalI GATC 4 cut(s) 927, 1092, 1099, 1107
MbiI CCGCTC 1 cut(s) 183
MboI GATC 4 cut(s) 925, 1090, 1097, 1105
MboII GAAGA 9 cut(s) 96, 99, 102, 504, 509, 641, 833, 840, 920
MhlI GDGCHC 3 cut(s) 55, 240, 1006
MluCI AATT 6 cut(s) 770, 981, 1011, 1056, 1222, 1265
MlyI GAGTC 3 cut(s) 139, 224, 955
MmeI TCCRAC 2 cut(s) 252, 1282
MroXI GAANNNNTTC 2 cut(s) 985, 1344
MseI TTAA 1 cut(s) 537
MslI CAYNNNNRTG 2 cut(s) 213, 1355
MspA1I CMGCKG 2 cut(s) 273, 1103
MspI CCGG 3 cut(s) 48, 186, 363
MspR9I CCNGG 5 cut(s) 459, 489, 608, 704, 1095
Mva1269I GAATGC 2 cut(s) 208, 1141
MvaI CCWGG 5 cut(s) 459, 489, 608, 704, 1095
MvnI CGCG 2 cut(s) 206, 273
MwoI GCNNNNNNNGC 3 cut(s) 244, 451, 1154
NdeII GATC 4 cut(s) 925, 1090, 1097, 1105
NlaIV GGNNCC 6 cut(s) 52, 361, 708, 1317, 1332, 1363
NspI RCATGY 2 cut(s) 563, 692
PaeI GCATGC 1 cut(s) 692
PctI GAATGC 2 cut(s) 208, 1141
PdmI GAANNNNTTC 2 cut(s) 985, 1344
PfeI GAWTC 3 cut(s) 551, 824, 1271
PfoI TCCNGGA 2 cut(s) 487, 1093
PkrI GCNGC 2 cut(s) 456, 890
PleI GAGTC 3 cut(s) 138, 224, 955
PpsI GAGTC 3 cut(s) 138, 224, 955
PpuMI RGGWCCY 1 cut(s) 1331
Psp124BI GAGCTC 1 cut(s) 240
Psp5II RGGWCCY 1 cut(s) 1331
Psp6I CCWGG 5 cut(s) 457, 487, 606, 702, 1093
PspFI CCCAGC 1 cut(s) 329
PspGI CCWGG 5 cut(s) 457, 487, 606, 702, 1093
PspN4I GGNNCC 6 cut(s) 52, 361, 708, 1317, 1332, 1363
PspPI GGNCC 5 cut(s) 278, 485, 610, 1181, 1331
PspPPI RGGWCCY 1 cut(s) 1331
PstNI CAGNNNCTG 1 cut(s) 613
PvuII CAGCTG 1 cut(s) 1103
RsaI GTAC 3 cut(s) 564, 637, 1363
RsaNI GTAC 3 cut(s) 563, 636, 1362
RseI CAYNNNNRTG 2 cut(s) 213, 1355
SacI GAGCTC 1 cut(s) 240
SacII CCGCGG 1 cut(s) 274
SaqAI TTAA 1 cut(s) 537
SatI GCNGC 2 cut(s) 455, 889
Sau3AI GATC 4 cut(s) 925, 1090, 1097, 1105
Sau96I GGNCC 5 cut(s) 278, 485, 610, 1181, 1331
SchI GAGTC 3 cut(s) 139, 224, 955
ScrFI CCNGG 5 cut(s) 459, 489, 608, 704, 1095
SduI GDGCHC 3 cut(s) 55, 240, 1006
SexAI ACCWGGT 1 cut(s) 702
SfaNI GCATC 3 cut(s) 267, 742, 956
SfcI CTRYAG 1 cut(s) 1049
Sfr303I CCGCGG 1 cut(s) 274
SgrBI CCGCGG 1 cut(s) 274
SinI GGWCC 2 cut(s) 485, 1331
SmiMI CAYNNNNRTG 2 cut(s) 213, 1355
SphI GCATGC 1 cut(s) 692
Sse9I AATT 6 cut(s) 770, 981, 1011, 1056, 1222, 1265
SsiI CCGC 4 cut(s) 181, 204, 271, 273
SspMI CTAG 3 cut(s) 473, 482, 1085
SstI GAGCTC 1 cut(s) 240
StyD4I CCNGG 5 cut(s) 457, 487, 606, 702, 1093
StyI CCWWGG 1 cut(s) 1204
TaaI ACNGT 3 cut(s) 347, 655, 1046
TaiI ACGT 1 cut(s) 1122
TaqI TCGA 2 cut(s) 177, 699
TasI AATT 6 cut(s) 770, 981, 1011, 1056, 1222, 1265
TatI WGTACW 1 cut(s) 562
TfiI GAWTC 3 cut(s) 551, 824, 1271
Tru1I TTAA 1 cut(s) 537
Tru9I TTAA 1 cut(s) 537
TscAI CASTG 2 cut(s) 553, 1117
TseI GCWGC 2 cut(s) 454, 888
TspDTI ATGAA 7 cut(s) 63, 231, 356, 482, 642, 755, 1166
TspGWI ACGGA 2 cut(s) 824, 1271
TspRI CASTG 2 cut(s) 553, 1117
VpaK11BI GGWCC 2 cut(s) 485, 1331
XapI RAATTY 1 cut(s) 1222
XbaI TCTAGA 1 cut(s) 1084
XceI RCATGY 2 cut(s) 563, 692
XmiI GTMKAC 1 cut(s) 1048
XmnI GAANNNNTTC 2 cut(s) 985, 1344
XspI CTAG 3 cut(s) 473, 482, 1085
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.