Rorug03G0277300

Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH ubiquinone oxidoreductase complex (complex I)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0005361
Physical Location & Seq
Forward (+)
27435964 .. 27437130
1167 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0277300.1

Sequence Viewer

Length: 1098 bp
ATGGAGATTTTGTCTTGGAATTGCAGAGGTATCGGCAATCCTTCCACGGTTCATGCCTTGAAAAATCTCATTGCTCAGAACCGGCCTTCTATTCTATTCTTATGTGAAACGAAAATCCAGTTTGATCGAGATTTTGAAAAACTGCACCGCGCGCTAGGGTTTGCGCATGAAGAACATGTCTTGAGTATTGGGCAATCAGGCGGACTCGGATTATTCTGGACGGAGGGTCTGAACGTCCGGGTCCGTGATTCTTCTCCTCGTTTTATCGATGTAGAAATTGGTGGTGGTCCAGGTGACCCAAAATGGAGATTGACGGGTTTTTATGGGCACCCTAGAAGAAGAGATCGACATCTTTCATGGCAACTCTTGAAGGATTTGGCTGATCAAGACTCTCTGCCGTGGGTCACTATTGGAGATTTTAATGAGATCATTCATTCAGGTGAGAAGGCAGGTGGCAGGGTTCGTCCTGAAGCCCAGATGCAAGGTTTTCGTGAAGCCTTGGGATATGCAGATTTGGTTGATTTAGGGTTTACTGGTAATATACATACATGGATCGACTCGGTGACTAAGGTACGGCTTGACCGTGCAGTTGGCACAGCGTCTTGGTCAGATATGTTTGGGTGCTCTAAGCTTCTTCATTTGCTGCCAAGTCGTTCTGATCATATTCATATTCTTCTAAGGGAGAGAGGATGTGATGCTATTGTCCAACATGAATGGGAGAATGAGTTATCTGGACAACCTATGTTCCAGGTTGTAAAGAAAATTAAGAAGACCAGTAAGGCTTTGACTGCTTGGCACAGGAACACGTTTAGTGATCGTAAGTTGTGCATTCAGAGACTCCGGAACAGGTTGGAACAAATTATGGGGCTTCCAATTTCGAATGAATTGAATGATGAGAAATGTGTCCTCAATAAACAACGTCTTGAGCAGCTCTTGACTCAAGAGGAATCGTACTGGGCTCAACGAGCTAAAGTTACTTGGTTGAAGGATGGAGATCGGAACACTAACTATTTCCATCGTAAAGCTTCCAATAGAAGGCGGAAGAATGGGATTCATGGGCTGTTTGACTCCCGGCCATGGTGTTTGGCAGGAGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04714 map04714
Pfam Domains
Protein Families
Methyltransf_28

Protein Analysis

365

Amino Acids

41.89

Weight (kDa)

9.33

Isoelectric Point (pI)

37.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo_endo_phos PF03372 4 - 202 4.1e-14 Endonuclease/Exonuclease/phosphatase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 440
Acc16I TGCGCA 1 cut(s) 165
Acc36I ACCTGC 1 cut(s) 440
AccB1I GGYRCC 1 cut(s) 327
AccII CGCG 2 cut(s) 150, 152
AccIII TCCGGA 1 cut(s) 840
AciI CCGC 3 cut(s) 148, 201, 1039
AclWI GGATC 1 cut(s) 560
AcoI YGGCCR 1 cut(s) 1073
AcuI CTGAAG 1 cut(s) 489
AfaI GTAC 2 cut(s) 573, 953
AfiI CCNNNNNNNGG 2 cut(s) 1035, 1077
AflIII ACRYGT 2 cut(s) 175, 804
AgsI TTSAA 5 cut(s) 61, 137, 370, 889, 985
AhdI GACNNNNNGTC 1 cut(s) 225
AjnI CCWGG 2 cut(s) 289, 747
AluBI AGCT 4 cut(s) 631, 931, 968, 1025
AluI AGCT 4 cut(s) 631, 931, 968, 1025
Alw21I GWGCWC 1 cut(s) 626
Alw26I GTCTC 1 cut(s) 829
AlwI GGATC 1 cut(s) 560
Aor13HI TCCGGA 1 cut(s) 840
AoxI GGCC 2 cut(s) 83, 1073
ApeKI GCWGC 2 cut(s) 643, 928
AspLEI GCGC 3 cut(s) 152, 154, 166
AspS9I GGNCC 2 cut(s) 241, 287
AsuC2I CCSGG 2 cut(s) 239, 1072
AsuHPI GGTGA 3 cut(s) 305, 452, 574
AsuII TTCGAA 1 cut(s) 878
AvaII GGWCC 2 cut(s) 241, 287
BaeGI GKGCMC 1 cut(s) 330
BanI GGYRCC 1 cut(s) 327
BanII GRGCYC 1 cut(s) 961
BbsI GAAGAC 1 cut(s) 776
Bbv12I GWGCWC 1 cut(s) 626
BbvI GCAGC 2 cut(s) 630, 940
BccI CCATC 2 cut(s) 983, 1023
BceAI ACGGC 2 cut(s) 382, 590
BcgI CGANNNNNNTGC 4 cut(s) 13, 47, 470, 504
BciT130I CCWGG 2 cut(s) 291, 749
BclI TGATCA 2 cut(s) 382, 658
BcnI CCSGG 2 cut(s) 239, 1072
BcoDI GTCTC 1 cut(s) 829
BfaI CTAG 2 cut(s) 155, 333
BfuAI ACCTGC 1 cut(s) 440
BisI GCNGC 2 cut(s) 644, 929
BlsI GCNGC 2 cut(s) 645, 930
Bme1390I CCNGG 4 cut(s) 239, 291, 749, 1072
Bme18I GGWCC 2 cut(s) 241, 287
BmeRI GACNNNNNGTC 1 cut(s) 225
BmgT120I GGNCC 2 cut(s) 241, 287
BmiI GGNNCC 2 cut(s) 242, 329
BmrFI CCNGG 4 cut(s) 239, 291, 749, 1072
BmrI ACTGGG 1 cut(s) 964
BmsI GCATC 2 cut(s) 468, 685
BmuI ACTGGG 1 cut(s) 964
BpiI GAAGAC 1 cut(s) 776
Bpu14I TTCGAA 1 cut(s) 878
BpuEI CTTGAG 3 cut(s) 202, 924, 944
BpuMI CCSGG 2 cut(s) 239, 1072
Bsa29I ATCGAT 1 cut(s) 267
BsaBI GATNNNNATC 2 cut(s) 348, 993
BsaJI CCNNGG 4 cut(s) 45, 398, 498, 1076
BsaWI WCCGGW 1 cut(s) 840
BsaXI ACNNNNNCTCC 3 cut(s) 26, 710, 740
Bsc4I CCNNNNNNNGG 2 cut(s) 1035, 1077
Bse118I RCCGGY 1 cut(s) 81
Bse1I ACTGG 4 cut(s) 118, 538, 774, 959
Bse3DI GCAATG 1 cut(s) 69
Bse8I GATNNNNATC 2 cut(s) 348, 993
BseAI TCCGGA 1 cut(s) 840
BseBI CCWGG 2 cut(s) 291, 749
BseCI ATCGAT 1 cut(s) 267
BseDI CCNNGG 4 cut(s) 45, 398, 498, 1076
BseGI GGATG 2 cut(s) 695, 994
BseJI GATNNNNATC 2 cut(s) 348, 993
BseLI CCNNNNNNNGG 2 cut(s) 1035, 1077
BseMI GCAATG 1 cut(s) 69
BseMII CTCAG 1 cut(s) 89
BseNI ACTGG 4 cut(s) 118, 538, 774, 959
BsePI GCGCGC 1 cut(s) 150
BseRI GAGGAG 1 cut(s) 246
BseSI GKGCMC 1 cut(s) 330
BseXI GCAGC 2 cut(s) 630, 940
BsgI GTGCAG 2 cut(s) 128, 606
Bsh1236I CGCG 2 cut(s) 150, 152
BshFI GGCC 2 cut(s) 85, 1075
BshNI GGYRCC 1 cut(s) 327
BshVI ATCGAT 1 cut(s) 267
BsiHKAI GWGCWC 1 cut(s) 626
BsiSI CCGG 4 cut(s) 82, 238, 841, 1072
BslI CCNNNNNNNGG 2 cut(s) 1035, 1077
BsmAI GTCTC 1 cut(s) 829
BsmI GAATGC 1 cut(s) 828
BsnI GGCC 2 cut(s) 85, 1075
Bsp119I TTCGAA 1 cut(s) 878
Bsp1286I GDGCHC 3 cut(s) 330, 626, 961
Bsp13I TCCGGA 1 cut(s) 840
Bsp143I GATC 8 cut(s) 124, 343, 382, 426, 552, 658, 814, 994
Bsp19I CCATGG 1 cut(s) 1076
BspACI CCGC 3 cut(s) 148, 201, 1039
BspANI GGCC 2 cut(s) 85, 1075
BspCNI CTCAG 1 cut(s) 88
BspDI ATCGAT 1 cut(s) 267
BspEI TCCGGA 1 cut(s) 840
BspFNI CGCG 2 cut(s) 150, 152
BspLI GGNNCC 2 cut(s) 242, 329
BspMI ACCTGC 1 cut(s) 440
BspPI GGATC 1 cut(s) 560
BspT104I TTCGAA 1 cut(s) 878
BspT107I GGYRCC 1 cut(s) 327
BsrDI GCAATG 1 cut(s) 69
BsrFI RCCGGY 1 cut(s) 81
BsrI ACTGG 4 cut(s) 118, 538, 774, 959
BssAI RCCGGY 1 cut(s) 81
BssECI CCNNGG 4 cut(s) 45, 398, 498, 1076
BssHII GCGCGC 1 cut(s) 150
BssMI GATC 8 cut(s) 124, 343, 382, 426, 552, 658, 814, 994
BssT1I CCWWGG 2 cut(s) 498, 1076
Bst2UI CCWGG 2 cut(s) 291, 749
Bst4CI ACNGT 2 cut(s) 49, 584
Bst6I CTCTTC 1 cut(s) 334
BstBI TTCGAA 1 cut(s) 878
BstC8I GCNNGC 1 cut(s) 152
BstDEI CTNAG 4 cut(s) 75, 567, 627, 677
BstDSI CCRYGG 3 cut(s) 45, 398, 1076
BstEII GGTNACC 1 cut(s) 293
BstF5I GGATG 2 cut(s) 695, 994
BstFNI CGCG 2 cut(s) 150, 152
BstHHI GCGC 3 cut(s) 152, 154, 166
BstKTI GATC 8 cut(s) 127, 346, 385, 429, 555, 661, 817, 997
BstMAI GTCTC 1 cut(s) 829
BstMBI GATC 8 cut(s) 124, 343, 382, 426, 552, 658, 814, 994
BstMWI GCNNNNNNNGC 3 cut(s) 151, 788, 965
BstNI CCWGG 2 cut(s) 291, 749
BstNSI RCATGY 1 cut(s) 179
BstPI GGTNACC 1 cut(s) 293
BstSCI CCNGG 4 cut(s) 237, 289, 747, 1070
BstSLI GKGCMC 1 cut(s) 330
BstUI CGCG 2 cut(s) 150, 152
BstV1I GCAGC 2 cut(s) 630, 940
BstV2I GAAGAC 1 cut(s) 776
Bsu15I ATCGAT 1 cut(s) 267
BsuRI GGCC 2 cut(s) 85, 1075
BsuTUI ATCGAT 1 cut(s) 267
BtgI CCRYGG 3 cut(s) 45, 398, 1076
BtsCI GGATG 2 cut(s) 695, 994
BveI ACCTGC 1 cut(s) 440
Cac8I GCNNGC 1 cut(s) 152
CfoI GCGC 3 cut(s) 152, 154, 166
Cfr10I RCCGGY 1 cut(s) 81
Cfr13I GGNCC 2 cut(s) 241, 287
ClaI ATCGAT 1 cut(s) 267
CseI GACGC 1 cut(s) 588
Csp6I GTAC 2 cut(s) 572, 952
CviAII CATG 8 cut(s) 53, 167, 176, 357, 549, 710, 1055, 1077
CviQI GTAC 2 cut(s) 572, 952
DdeI CTNAG 4 cut(s) 75, 567, 627, 677
DpnI GATC 8 cut(s) 126, 345, 384, 428, 554, 660, 816, 996
DpnII GATC 8 cut(s) 124, 343, 382, 426, 552, 658, 814, 994
DriI GACNNNNNGTC 1 cut(s) 225
EaeI YGGCCR 1 cut(s) 1073
Eam1104I CTCTTC 1 cut(s) 334
Eam1105I GACNNNNNGTC 1 cut(s) 225
EarI CTCTTC 1 cut(s) 334
EciI GGCGGA 2 cut(s) 216, 1054
Eco130I CCWWGG 2 cut(s) 498, 1076
Eco24I GRGCYC 1 cut(s) 961
Eco47I GGWCC 2 cut(s) 241, 287
Eco57I CTGAAG 1 cut(s) 489
Eco91I GGTNACC 1 cut(s) 293
EcoO65I GGTNACC 1 cut(s) 293
EcoRII CCWGG 2 cut(s) 289, 747
EcoT14I CCWWGG 2 cut(s) 498, 1076
EcoT38I GRGCYC 1 cut(s) 961
ErhI CCWWGG 2 cut(s) 498, 1076
FaeI CATG 8 cut(s) 56, 170, 179, 360, 552, 713, 1058, 1080
FatI CATG 8 cut(s) 52, 166, 175, 356, 548, 709, 1054, 1076
FbaI TGATCA 2 cut(s) 382, 658
Fnu4HI GCNGC 2 cut(s) 644, 929
FokI GGATG 2 cut(s) 702, 1001
FriOI GRGCYC 1 cut(s) 961
Fsp4HI GCNGC 2 cut(s) 644, 929
FspBI CTAG 2 cut(s) 155, 333
FspI TGCGCA 1 cut(s) 165
GlaI GCGC 3 cut(s) 151, 153, 165
GluI GCNGC 2 cut(s) 644, 929
HaeIII GGCC 2 cut(s) 85, 1075
HapII CCGG 4 cut(s) 82, 238, 841, 1072
HgaI GACGC 1 cut(s) 588
HhaI GCGC 3 cut(s) 152, 154, 166
Hin1II CATG 8 cut(s) 56, 170, 179, 360, 552, 713, 1058, 1080
Hin6I GCGC 3 cut(s) 150, 152, 164
HinP1I GCGC 3 cut(s) 150, 152, 164
HindIII AAGCTT 2 cut(s) 629, 1023
HinfI GANTC 9 cut(s) 204, 248, 389, 557, 837, 937, 947, 1051, 1067
HpaII CCGG 4 cut(s) 82, 238, 841, 1072
HphI GGTGA 3 cut(s) 305, 452, 574
Hpy166II GTNNAC 1 cut(s) 531
Hpy188I TCNGA 7 cut(s) 78, 209, 231, 610, 658, 834, 999
Hpy8I GTNNAC 1 cut(s) 531
HpyAV CCTTC 6 cut(s) 51, 96, 364, 439, 979, 1029
HpyCH4III ACNGT 2 cut(s) 49, 584
HpyCH4IV ACGT 3 cut(s) 234, 806, 919
HpyCH4V TGCA 6 cut(s) 24, 145, 481, 509, 587, 828
HpyF10VI GCNNNNNNNGC 3 cut(s) 151, 788, 965
HpyF3I CTNAG 4 cut(s) 75, 567, 627, 677
HpySE526I ACGT 3 cut(s) 234, 806, 919
Hsp92II CATG 8 cut(s) 56, 170, 179, 360, 552, 713, 1058, 1080
HspAI GCGC 3 cut(s) 150, 152, 164
Kpn2I TCCGGA 1 cut(s) 840
Ksp22I TGATCA 2 cut(s) 382, 658
Kzo9I GATC 8 cut(s) 124, 343, 382, 426, 552, 658, 814, 994
Lsp1109I GCAGC 2 cut(s) 630, 940
LweI GCATC 2 cut(s) 468, 685
MaeI CTAG 2 cut(s) 155, 333
MaeII ACGT 3 cut(s) 234, 806, 919
MaeIII GTNAC 4 cut(s) 293, 403, 562, 973
MalI GATC 8 cut(s) 126, 345, 384, 428, 554, 660, 816, 996
MboI GATC 8 cut(s) 124, 343, 382, 426, 552, 658, 814, 994
MboII GAAGA 8 cut(s) 182, 243, 348, 351, 626, 665, 781, 1054
MhlI GDGCHC 3 cut(s) 330, 626, 961
MluCI AATT 6 cut(s) 19, 276, 762, 858, 873, 884
MlyI GAGTC 6 cut(s) 198, 383, 551, 831, 931, 1061
MmeI TCCRAC 2 cut(s) 730, 831
MnlI CCTC 7 cut(s) 20, 217, 267, 680, 917, 937, 1085
MroI TCCGGA 1 cut(s) 840
MseI TTAA 2 cut(s) 420, 765
MslI CAYNNNNRTG 1 cut(s) 438
MspI CCGG 4 cut(s) 82, 238, 841, 1072
MspR9I CCNGG 4 cut(s) 239, 291, 749, 1072
Mva1269I GAATGC 1 cut(s) 828
MvaI CCWGG 2 cut(s) 291, 749
MvnI CGCG 2 cut(s) 150, 152
MwoI GCNNNNNNNGC 3 cut(s) 151, 788, 965
NciI CCSGG 2 cut(s) 239, 1072
NcoI CCATGG 1 cut(s) 1076
NdeII GATC 8 cut(s) 124, 343, 382, 426, 552, 658, 814, 994
NlaIII CATG 8 cut(s) 56, 170, 179, 360, 552, 713, 1058, 1080
NlaIV GGNNCC 2 cut(s) 242, 329
NmuCI GTSAC 3 cut(s) 293, 403, 562
NsbI TGCGCA 1 cut(s) 165
NspI RCATGY 1 cut(s) 179
NspV TTCGAA 1 cut(s) 878
PaqCI CACCTGC 1 cut(s) 440
PauI GCGCGC 1 cut(s) 150
PciI ACATGT 1 cut(s) 175
PcsI WCGNNNNNNNCGW 1 cut(s) 580
PctI GAATGC 1 cut(s) 828
PfeI GAWTC 3 cut(s) 248, 947, 1051
PkrI GCNGC 2 cut(s) 645, 930
PleI GAGTC 6 cut(s) 198, 383, 551, 831, 931, 1061
PpsI GAGTC 6 cut(s) 198, 383, 551, 831, 931, 1061
PscI ACATGT 1 cut(s) 175
Psp6I CCWGG 2 cut(s) 289, 747
PspEI GGTNACC 1 cut(s) 293
PspGI CCWGG 2 cut(s) 289, 747
PspN4I GGNNCC 2 cut(s) 242, 329
PspPI GGNCC 2 cut(s) 241, 287
PteI GCGCGC 1 cut(s) 150
RsaI GTAC 2 cut(s) 573, 953
RsaNI GTAC 2 cut(s) 572, 952
RseI CAYNNNNRTG 1 cut(s) 438
SaqAI TTAA 2 cut(s) 420, 765
SatI GCNGC 2 cut(s) 644, 929
Sau3AI GATC 8 cut(s) 124, 343, 382, 426, 552, 658, 814, 994
Sau96I GGNCC 2 cut(s) 241, 287
SchI GAGTC 6 cut(s) 198, 383, 551, 831, 931, 1061
ScrFI CCNGG 4 cut(s) 239, 291, 749, 1072
SduI GDGCHC 3 cut(s) 330, 626, 961
SfaNI GCATC 2 cut(s) 468, 685
SfuI TTCGAA 1 cut(s) 878
SinI GGWCC 2 cut(s) 241, 287
SmiMI CAYNNNNRTG 1 cut(s) 438
SmlI CTYRAG 3 cut(s) 181, 923, 939
SmoI CTYRAG 3 cut(s) 181, 923, 939
Sse9I AATT 6 cut(s) 19, 276, 762, 858, 873, 884
SsiI CCGC 3 cut(s) 148, 201, 1039
SspMI CTAG 2 cut(s) 155, 333
StyD4I CCNGG 4 cut(s) 237, 289, 747, 1070
StyI CCWWGG 2 cut(s) 498, 1076
TaaI ACNGT 2 cut(s) 49, 584
TaiI ACGT 3 cut(s) 237, 809, 922
TaqI TCGA 5 cut(s) 127, 267, 346, 555, 878
TasI AATT 6 cut(s) 19, 276, 762, 858, 873, 884
TfiI GAWTC 3 cut(s) 248, 947, 1051
Tru1I TTAA 2 cut(s) 420, 765
Tru9I TTAA 2 cut(s) 420, 765
TseFI GTSAC 3 cut(s) 293, 403, 562
TseI GCWGC 2 cut(s) 643, 928
Tsp45I GTSAC 3 cut(s) 293, 403, 562
TspDTI ATGAA 9 cut(s) 41, 183, 345, 422, 626, 656, 726, 897, 1043
TspGWI ACGGA 2 cut(s) 233, 236
VpaK11BI GGWCC 2 cut(s) 241, 287
XceI RCATGY 1 cut(s) 179
XspI CTAG 2 cut(s) 155, 333
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.