pycom111g03630

Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH ubiquinone oxidoreductase complex (complex I)

Basic Information

Type: gene
Biological Identity
pyrus_communis
SuperScaffold_111
Physical Location & Seq
Reverse (-)
2226436 .. 2226982
547 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom111g03630.3

Sequence Viewer

Length: 327 bp
ATGTTTGGGGAGATGGTTGGTGTTTGGGCAATGTCTCTGTGGGAGCAAATGGGACAGCCTGATAAAGTGAACCTAGTAGAGCTAGGTCCGGGAAGAGGAACTCTCATGGCCGACCTTCTTCGTGGTGCATCAAAATTTAAGAACTGCACCGAATCATTGCACGTACACATGGTAGAATGCAGTCCTGCGTTGCAGAAACTTCAGTACCAGAAGCTGGAATGTGCAAACAAAGAGGTTTCGGATGGCAAAAGGACTGTAAGCGCGTTGGCTAAAACTCCTGTATCTTGGCATGCCACATTGGAAGACGTTCCTACAGGATGTATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

109

Amino Acids

11.88

Weight (kDa)

6.27

Isoelectric Point (pI)

50.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 214
AccII CGCG 1 cut(s) 263
AcoI YGGCCR 1 cut(s) 108
AcsI RAATTY 1 cut(s) 134
AcuI CTGAAG 1 cut(s) 185
AfaI GTAC 2 cut(s) 165, 206
AfiI CCNNNNNNNGG 2 cut(s) 95, 214
AluBI AGCT 2 cut(s) 82, 214
AluI AGCT 2 cut(s) 82, 214
Alw26I GTCTC 1 cut(s) 39
AlwNI CAGNNNCTG 1 cut(s) 214
AoxI GGCC 1 cut(s) 108
ApoI RAATTY 1 cut(s) 134
Asp700I GAANNNNTTC 1 cut(s) 306
AspLEI GCGC 1 cut(s) 263
AspS9I GGNCC 1 cut(s) 86
AsuC2I CCSGG 1 cut(s) 90
AvaII GGWCC 1 cut(s) 86
BaeI ACNNNNGTAYC 4 cut(s) 188, 221, 264, 297
BbsI GAAGAC 1 cut(s) 309
BccI CCATC 2 cut(s) 7, 236
BcnI CCSGG 1 cut(s) 90
BcoDI GTCTC 1 cut(s) 39
BfaI CTAG 2 cut(s) 74, 83
BfmI CTRYAG 1 cut(s) 312
Bme1390I CCNGG 1 cut(s) 90
Bme18I GGWCC 1 cut(s) 86
BmgT120I GGNCC 1 cut(s) 86
BmrFI CCNGG 1 cut(s) 90
BmsI GCATC 1 cut(s) 137
BpiI GAAGAC 1 cut(s) 309
BplI GAGNNNNNCTC 2 cut(s) 87, 119
BpuMI CCSGG 1 cut(s) 90
BsaAI YACGTR 1 cut(s) 163
Bsc4I CCNNNNNNNGG 2 cut(s) 95, 214
Bse3DI GCAATG 2 cut(s) 36, 155
BseGI GGATG 2 cut(s) 247, 323
BseLI CCNNNNNNNGG 2 cut(s) 95, 214
BseMI GCAATG 2 cut(s) 36, 155
BsgI GTGCAG 1 cut(s) 130
Bsh1236I CGCG 1 cut(s) 263
BshFI GGCC 1 cut(s) 110
BsiSI CCGG 1 cut(s) 89
BslFI GGGAC 1 cut(s) 66
BslI CCNNNNNNNGG 2 cut(s) 95, 214
BsmAI GTCTC 1 cut(s) 39
BsmFI GGGAC 1 cut(s) 66
BsmI GAATGC 1 cut(s) 182
BsnI GGCC 1 cut(s) 110
BspANI GGCC 1 cut(s) 110
BspFNI CGCG 1 cut(s) 263
BsrDI GCAATG 2 cut(s) 36, 155
Bst4CI ACNGT 1 cut(s) 256
Bst6I CTCTTC 1 cut(s) 88
BstBAI YACGTR 1 cut(s) 163
BstC8I GCNNGC 1 cut(s) 291
BstF5I GGATG 2 cut(s) 247, 323
BstFNI CGCG 1 cut(s) 263
BstHHI GCGC 1 cut(s) 263
BstMAI GTCTC 1 cut(s) 39
BstNSI RCATGY 1 cut(s) 293
BstSCI CCNGG 1 cut(s) 88
BstSFI CTRYAG 1 cut(s) 312
BstUI CGCG 1 cut(s) 263
BstV2I GAAGAC 1 cut(s) 309
BsuRI GGCC 1 cut(s) 110
BtsCI GGATG 2 cut(s) 247, 323
Cac8I GCNNGC 1 cut(s) 291
CaiI CAGNNNCTG 1 cut(s) 214
CfoI GCGC 1 cut(s) 263
Cfr13I GGNCC 1 cut(s) 86
Csp6I GTAC 2 cut(s) 164, 205
CviAII CATG 3 cut(s) 106, 169, 290
CviJI RGCY 5 cut(s) 58, 82, 110, 214, 269
CviKI_1 RGCY 5 cut(s) 58, 82, 110, 214, 269
CviQI GTAC 2 cut(s) 164, 205
EaeI YGGCCR 1 cut(s) 108
Eam1104I CTCTTC 1 cut(s) 88
EarI CTCTTC 1 cut(s) 88
Eco47I GGWCC 1 cut(s) 86
Eco57I CTGAAG 1 cut(s) 185
FaeI CATG 3 cut(s) 109, 172, 293
FaiI YATR 4 cut(s) 107, 170, 291, 323
FaqI GGGAC 1 cut(s) 66
FatI CATG 3 cut(s) 105, 168, 289
FokI GGATG 1 cut(s) 254
FspBI CTAG 2 cut(s) 74, 83
GlaI GCGC 1 cut(s) 262
HaeIII GGCC 1 cut(s) 110
HapII CCGG 1 cut(s) 89
HhaI GCGC 1 cut(s) 263
Hin1II CATG 3 cut(s) 109, 172, 293
Hin6I GCGC 1 cut(s) 261
HinP1I GCGC 1 cut(s) 261
HinfI GANTC 1 cut(s) 152
HpaII CCGG 1 cut(s) 89
Hpy166II GTNNAC 2 cut(s) 70, 166
Hpy188I TCNGA 1 cut(s) 241
Hpy8I GTNNAC 2 cut(s) 70, 166
HpyAV CCTTC 1 cut(s) 125
HpyCH4III ACNGT 1 cut(s) 256
HpyCH4IV ACGT 2 cut(s) 162, 306
HpyCH4V TGCA 6 cut(s) 128, 147, 160, 180, 193, 224
HpySE526I ACGT 2 cut(s) 162, 306
Hsp92II CATG 3 cut(s) 109, 172, 293
HspAI GCGC 1 cut(s) 261
LmnI GCTCC 1 cut(s) 43
LpnPI CCDG 7 cut(s) 72, 102, 198, 200, 221, 291, 300
LweI GCATC 1 cut(s) 137
MaeI CTAG 2 cut(s) 74, 83
MaeII ACGT 2 cut(s) 162, 306
MboII GAAGA 3 cut(s) 105, 110, 314
MluCI AATT 1 cut(s) 134
MnlI CCTC 2 cut(s) 89, 226
MroXI GAANNNNTTC 1 cut(s) 306
MseI TTAA 1 cut(s) 138
MspI CCGG 1 cut(s) 89
MspR9I CCNGG 1 cut(s) 90
Mva1269I GAATGC 1 cut(s) 182
MvnI CGCG 1 cut(s) 263
NciI CCSGG 1 cut(s) 90
NlaIII CATG 3 cut(s) 109, 172, 293
NspI RCATGY 1 cut(s) 293
PaeI GCATGC 1 cut(s) 293
PctI GAATGC 1 cut(s) 182
PdmI GAANNNNTTC 1 cut(s) 306
PfeI GAWTC 1 cut(s) 152
PflMI CCANNNNNTGG 1 cut(s) 214
PfoI TCCNGGA 1 cut(s) 88
Ppu21I YACGTR 1 cut(s) 163
PspPI GGNCC 1 cut(s) 86
PstNI CAGNNNCTG 1 cut(s) 214
RsaI GTAC 2 cut(s) 165, 206
RsaNI GTAC 2 cut(s) 164, 205
SaqAI TTAA 1 cut(s) 138
Sau96I GGNCC 1 cut(s) 86
ScrFI CCNGG 1 cut(s) 90
SetI ASST 8 cut(s) 75, 84, 88, 117, 165, 216, 237, 309
SfaNI GCATC 1 cut(s) 137
SfcI CTRYAG 1 cut(s) 312
SinI GGWCC 1 cut(s) 86
SphI GCATGC 1 cut(s) 293
Sse9I AATT 1 cut(s) 134
SspMI CTAG 2 cut(s) 74, 83
StyD4I CCNGG 1 cut(s) 88
TaaI ACNGT 1 cut(s) 256
TaiI ACGT 2 cut(s) 165, 309
TasI AATT 1 cut(s) 134
TfiI GAWTC 1 cut(s) 152
Tru1I TTAA 1 cut(s) 138
Tru9I TTAA 1 cut(s) 138
Van91I CCANNNNNTGG 1 cut(s) 214
VpaK11BI GGWCC 1 cut(s) 86
XapI RAATTY 1 cut(s) 134
XceI RCATGY 1 cut(s) 293
XmnI GAANNNNTTC 1 cut(s) 306
XspI CTAG 2 cut(s) 74, 83
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.