Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000440.1

Orthogroup ID

OG0005361

Physical Location & Seq

Genomic Coordinates Forward (+)

28116 .. 32617

Gene Structure 4502 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000440.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1842 bp

atggaggaggttttgacgaacccgaaagctgggttctacatgaaccgtgatgtttttggagccggaggtgattttatcacctccccagaagtgagccagatgttcggggagatggttggtgtttgggcgatgtctctgtgggagcagatggggcagccaggaaaaatgaacctagtagagctaggtccaggaagaggaactctcatggccgaccttcttcggggtgcgtccaagtttaagaacttcactgaatcgttgcatgtacacatggtggagtgcagtcctgcattacagaagctccagcaccaggccctgaaatgtgtggatgaagagggtacggctaagaaaaggactgtcagcactttggctaaaactcctgtgtcatggcatgccacattcgaccaggttccttcaggattgccatctattatcatcgcccatgagttttatgatgctttaccagttcatcaatttcagagggcttctcgtggctggtgtgagaaaatggtggatgttgcagaagattcaaagttccgttttgttctttcttcacagcctacaccagcaacgctttatctggcaaaacgctgcaaatgggctggaatggaagaaatagcgaagcttgatcatgttgaggtttgccctgcatcaatggagttgactcaaagtattgctgatagaattgcttctgatgggggtggtgctcttgtaattgattatggtcagaatggagtagtctctgacagtctgcaggcaattcggaaacataagtttgttgacattctagatgatccaggatcagctgatctcagtgcctacgttgattttgcttccatcaggcattctgctgaggaagcttcaggagatgtgtctgttcatggccctattactcagtctcagttccttggctctcttgggataaatttccgagtggaagcattgttgcagaactgcacggaggaacaatttgaatctctcaggtcagggtattggcaactggttggagaaggtgaggctcccttctgggagggtcctgacgaaaaagttcccatcggaatgggtctgggtgttggcaactggtcggacaaggcgaggcttaccggcggtggcctgatgaacaagtttccatcggaatcggtccccgttattcggcaatggctatcgtcacaagaagcgaaatggcatcgtcaacaaatcggtcattcagctttgacttcagagagcgaagaagaaggagaaggagagaagaaagcatgggatcgtttctgtcaagctttctcggaggatcatcgccggcggaggactccgccgcgtcgtaactggttggagaaggtgaggctcccttctgggagggtcctgacgaaaaagttcccatcggaatgggtacccgttatttggtctgggtgttggcaactggtcggacaaggcgaggcttaccggcggtggcctgatgaacaagtttccatcggaatcggaccagccgccgccgaggatgccgcgccggaagactctcgggtgatgtcgtttcactcatccgccaggtggcagctccacttcaattccgtcaaggacacctccaaactgctggtgatcgatttctcggcgtcgtggtgcgggccctgcaggttcatagagccggcaatccacgcgatggcggctaagttcaccgacgtcgacttcgccaagatcgacgtcgacgagctctctgatgtgtctcaggaatttggggtgcaggcaatgccgacctttgtgcttttgaagaacgggaaggaggtggatcgggttgttggtgccaagaaagatgagcttgagaagaaggttgagaagtaccgttcactttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04714 map04714

Pfam Domains

Protein Families

Methyltransf_28

Protein Analysis

613

Amino Acids

68.17

Weight (kDa)

5.57

Isoelectric Point (pI)

49.58

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005361)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G28700 AT3G28700 AT3G28700
fragaria_vesca	FvH4_6g49351 FvH4_6g49351 FvH4_6g49351
malus_domestica	MD09G1045900.v1.1 MD17G1046800.v1.1
prunus_persica	Prupe.3G272300_v2.0.a1
pyrus_communis	pycom111g03620 pycom111g03630 pycom17g04170
rosa_chinensis	RchiOBHm_Chr2g0169211
rosa_laevigata	RLG00000021842
rosa_multiflora	Rmu_co8486809.1_g000001 Rmu_sc0021002.1_g000001 Rmu_sc0021834.1_g000001 Rmu_ssc0000440.1_g000007
rosa_roxburghii	Rroxscaffold_2G00082350
rosa_rugosa	Rorug02G0538100 Rorug03G0277200 Rorug03G0277300 Rorug03G0277400
rosa_samantha	Rh2AG609600 Rh2BG622600 Rh2CG591100 Rh2DG633400 Rh4CG388500
rosa_wichuraiana	Rw2G050550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	1674, 1695
Acc36I	ACCTGC	1 cut(s)	1614
Acc65I	GGTACC	1 cut(s)	1384
AccB1I	GGYRCC	2 cut(s)	1384, 1790
AccB7I	CCANNNNNTGG	1 cut(s)	1651
AccI	GTMKAC	2 cut(s)	1674, 1695
AccII	CGCG	3 cut(s)	1312, 1499, 1649
AclWI	GGATC	5 cut(s)	785, 805, 1266, 1293, 1785
AcoI	YGGCCR	1 cut(s)	207
AcsI	RAATTY	2 cut(s)	922, 1721
AcuI	CTGAAG	3 cut(s)	396, 843, 1200
AcyI	GRCGYC	3 cut(s)	1604, 1671, 1692
AdeI	CACNNNGTG	1 cut(s)	271
AfaI	GTAC	4 cut(s)	264, 337, 1386, 1829
AfiI	CCNNNNNNNGG	8 cut(s)	29, 194, 220, 307, 1149, 1395, 1542, 1651
AgsI	TTSAA	4 cut(s)	528, 971, 1558, 1759
AjnI	CCWGG	6 cut(s)	157, 187, 306, 402, 793, 1538
Alw21I	GWGCWC	2 cut(s)	706, 1704
Alw26I	GTCTC	4 cut(s)	138, 742, 900, 1719
AlwI	GGATC	5 cut(s)	785, 805, 1266, 1293, 1785
AlwNI	CAGNNNCTG	1 cut(s)	313
Ama87I	CYCGRG	1 cut(s)	1512
AoxI	GGCC	6 cut(s)	207, 309, 880, 1108, 1445, 1616
ApaI	GGGCCC	1 cut(s)	1620
ApeKI	GCWGC	3 cut(s)	154, 588, 1546
ApoI	RAATTY	2 cut(s)	922, 1721
ArsI	GACNNNNNNTTYG	2 cut(s)	1661, 1693
Asp700I	GAANNNNTTC	3 cut(s)	685, 1044, 1367
Asp718I	GGTACC	1 cut(s)	1384
AspLEI	GCGC	1 cut(s)	1501
AspS9I	GGNCC	9 cut(s)	185, 310, 881, 1031, 1138, 1354, 1475, 1616, 1617
AsuHPI	GGTGA	7 cut(s)	70, 80, 1022, 1345, 1528, 1600, 1657
AvaI	CYCGRG	1 cut(s)	1512
AvaII	GGWCC	5 cut(s)	185, 1031, 1138, 1354, 1475
BaeGI	GKGCMC	1 cut(s)	1620
BanI	GGYRCC	2 cut(s)	1384, 1790
BanII	GRGCYC	2 cut(s)	1620, 1704
BauI	CACGAG	1 cut(s)	486
BbsI	GAAGAC	1 cut(s)	1512
Bbv12I	GWGCWC	2 cut(s)	706, 1704
BbvCI	CCTCAGC	1 cut(s)	849
BbvI	GCAGC	3 cut(s)	166, 575, 1558
BceAI	ACGGC	1 cut(s)	354
BcgI	CGANNNNNNTGC	4 cut(s)	740, 774, 1732, 1766
BciT130I	CCWGG	6 cut(s)	159, 189, 308, 404, 795, 1540
BclI	TGATCA	1 cut(s)	625
BcoDI	GTCTC	4 cut(s)	138, 742, 900, 1719
BfaI	CTAG	3 cut(s)	173, 182, 785
BfmI	CTRYAG	2 cut(s)	749, 1621
BfuAI	ACCTGC	1 cut(s)	1614
BisI	GCNGC	8 cut(s)	155, 589, 1310, 1482, 1485, 1497, 1547, 1656
BlsI	GCNGC	8 cut(s)	156, 590, 1311, 1483, 1486, 1498, 1548, 1657
Bme1390I	CCNGG	6 cut(s)	159, 189, 308, 404, 795, 1540
Bme18I	GGWCC	5 cut(s)	185, 1031, 1138, 1354, 1475
BmeT110I	CYCGRG	1 cut(s)	1512
BmgT120I	GGNCC	9 cut(s)	185, 310, 881, 1031, 1138, 1354, 1475, 1616, 1617
BmrFI	CCNGG	6 cut(s)	159, 189, 308, 404, 795, 1540
BmsI	GCATC	4 cut(s)	442, 656, 1192, 1483
BpiI	GAAGAC	1 cut(s)	1512
BplI	GAGNNNNNCTC	4 cut(s)	186, 218, 469, 501
BpmI	CTGGAG	1 cut(s)	284
Bpu10I	CCTNAGC	1 cut(s)	849
BpuEI	CTTGAG	1 cut(s)	1829
Bsa29I	ATCGAT	1 cut(s)	1593
BsaBI	GATNNNNATC	1 cut(s)	421
BsaHI	GRCGYC	3 cut(s)	1604, 1671, 1692
BsaJI	CCNNGG	2 cut(s)	904, 1488
BsaXI	ACNNNNNCTCC	2 cut(s)	282, 312
Bsc4I	CCNNNNNNNGG	8 cut(s)	29, 194, 220, 307, 1149, 1395, 1542, 1651
Bse118I	RCCGGY	4 cut(s)	1100, 1293, 1437, 1636
Bse1I	ACTGG	5 cut(s)	461, 1002, 1082, 1325, 1419
Bse3DI	GCAATG	2 cut(s)	1160, 1743
Bse8I	GATNNNNATC	1 cut(s)	421
BseBI	CCWGG	6 cut(s)	159, 189, 308, 404, 795, 1540
BseCI	ATCGAT	1 cut(s)	1593
BseDI	CCNNGG	2 cut(s)	904, 1488
BseGI	GGATG	4 cut(s)	331, 517, 1498, 1532
BseJI	GATNNNNATC	1 cut(s)	421
BseLI	CCNNNNNNNGG	8 cut(s)	29, 194, 220, 307, 1149, 1395, 1542, 1651
BseMI	GCAATG	2 cut(s)	1160, 1743
BseMII	CTCAG	6 cut(s)	823, 840, 905, 911, 991, 1730
BseNI	ACTGG	5 cut(s)	461, 1002, 1082, 1325, 1419
BseRI	GAGGAG	1 cut(s)	20
BseSI	GKGCMC	1 cut(s)	1620
BseXI	GCAGC	3 cut(s)	166, 575, 1558
BseYI	CCCAGC	1 cut(s)	29
BsgI	GTGCAG	3 cut(s)	298, 937, 1751
Bsh1236I	CGCG	3 cut(s)	1312, 1499, 1649
BshFI	GGCC	6 cut(s)	209, 311, 882, 1110, 1447, 1618
BshNI	GGYRCC	2 cut(s)	1384, 1790
BshVI	ATCGAT	1 cut(s)	1593
BsiHKAI	GWGCWC	2 cut(s)	706, 1704
BsiHKCI	CYCGRG	1 cut(s)	1512
BsiSI	CCGG	6 cut(s)	63, 1101, 1294, 1438, 1502, 1637
BslFI	GGGAC	1 cut(s)	1124
BslI	CCNNNNNNNGG	8 cut(s)	29, 194, 220, 307, 1149, 1395, 1542, 1651
BsmAI	GTCTC	4 cut(s)	138, 742, 900, 1719
BsmFI	GGGAC	1 cut(s)	1124
BsmI	GAATGC	1 cut(s)	841
BsnI	GGCC	6 cut(s)	209, 311, 882, 1110, 1447, 1618
BsoBI	CYCGRG	1 cut(s)	1512
Bsp120I	GGGCCC	1 cut(s)	1616
Bsp1286I	GDGCHC	3 cut(s)	706, 1620, 1704
Bsp1407I	TGTACA	1 cut(s)	262
Bsp143I	GATC	9 cut(s)	625, 790, 797, 805, 1258, 1285, 1590, 1686, 1777
BspANI	GGCC	6 cut(s)	209, 311, 882, 1110, 1447, 1618
BspCNI	CTCAG	6 cut(s)	822, 841, 904, 910, 990, 1729
BspDI	ATCGAT	1 cut(s)	1593
BspFNI	CGCG	3 cut(s)	1312, 1499, 1649
BspMAI	CTGCAG	2 cut(s)	753, 1625
BspMI	ACCTGC	1 cut(s)	1614
BspPI	GGATC	5 cut(s)	785, 805, 1266, 1293, 1785
BspT107I	GGYRCC	2 cut(s)	1384, 1790
BsrDI	GCAATG	2 cut(s)	1160, 1743
BsrFI	RCCGGY	4 cut(s)	1100, 1293, 1437, 1636
BsrGI	TGTACA	1 cut(s)	262
BsrI	ACTGG	5 cut(s)	461, 1002, 1082, 1325, 1419
BssAI	RCCGGY	4 cut(s)	1100, 1293, 1437, 1636
BssECI	CCNNGG	2 cut(s)	904, 1488
BssMI	GATC	9 cut(s)	625, 790, 797, 805, 1258, 1285, 1590, 1686, 1777
BssNI	GRCGYC	3 cut(s)	1604, 1671, 1692
BssSI	CACGAG	1 cut(s)	486
BssT1I	CCWWGG	1 cut(s)	904
Bst2BI	CACGAG	1 cut(s)	486
Bst2UI	CCWGG	6 cut(s)	159, 189, 308, 404, 795, 1540
Bst4CI	ACNGT	4 cut(s)	47, 355, 746, 1832
Bst6I	CTCTTC	2 cut(s)	187, 324
BstACI	GRCGYC	3 cut(s)	1604, 1671, 1692
BstAPI	GCANNNNNTGC	1 cut(s)	1738
BstAUI	TGTACA	1 cut(s)	262
BstC8I	GCNNGC	6 cut(s)	390, 753, 1295, 1616, 1638, 1734
BstDEI	CTNAG	8 cut(s)	342, 809, 849, 891, 897, 977, 1659, 1716
BstF5I	GGATG	4 cut(s)	331, 517, 1498, 1532
BstFNI	CGCG	3 cut(s)	1312, 1499, 1649
BstHHI	GCGC	1 cut(s)	1501
BstKTI	GATC	9 cut(s)	628, 793, 800, 808, 1261, 1288, 1593, 1689, 1780
BstMAI	GTCTC	4 cut(s)	138, 742, 900, 1719
BstMBI	GATC	9 cut(s)	625, 790, 797, 805, 1258, 1285, 1590, 1686, 1777
BstMWI	GCNNNNNNNGC	7 cut(s)	151, 854, 1493, 1620, 1646, 1655, 1738
BstNI	CCWGG	6 cut(s)	159, 189, 308, 404, 795, 1540
BstNSI	RCATGY	2 cut(s)	263, 392
BstSCI	CCNGG	6 cut(s)	157, 187, 306, 402, 793, 1538
BstSFI	CTRYAG	2 cut(s)	749, 1621
BstSLI	GKGCMC	1 cut(s)	1620
BstUI	CGCG	3 cut(s)	1312, 1499, 1649
BstV1I	GCAGC	3 cut(s)	166, 575, 1558
BstV2I	GAAGAC	1 cut(s)	1512
BstXI	CCANNNNNNTGG	3 cut(s)	1057, 1380, 1585
Bsu15I	ATCGAT	1 cut(s)	1593
BsuRI	GGCC	6 cut(s)	209, 311, 882, 1110, 1447, 1618
BsuTUI	ATCGAT	1 cut(s)	1593
BtgZI	GCGATG	4 cut(s)	143, 418, 1274, 1664
BtsCI	GGATG	4 cut(s)	331, 517, 1498, 1532
BtsIMutI	CAGTG	2 cut(s)	246, 817
BveI	ACCTGC	1 cut(s)	1614
Cac8I	GCNNGC	6 cut(s)	390, 753, 1295, 1616, 1638, 1734
CaiI	CAGNNNCTG	1 cut(s)	313
CfoI	GCGC	1 cut(s)	1501
Cfr10I	RCCGGY	4 cut(s)	1100, 1293, 1437, 1636
Cfr13I	GGNCC	9 cut(s)	185, 310, 881, 1031, 1138, 1354, 1475, 1616, 1617
ClaI	ATCGAT	1 cut(s)	1593
CseI	GACGC	3 cut(s)	216, 1301, 1593
CsiI	ACCWGGT	1 cut(s)	402
Csp6I	GTAC	4 cut(s)	263, 336, 1385, 1828
CviQI	GTAC	4 cut(s)	263, 336, 1385, 1828
DdeI	CTNAG	8 cut(s)	342, 809, 849, 891, 897, 977, 1659, 1716
DpnI	GATC	9 cut(s)	627, 792, 799, 807, 1260, 1287, 1592, 1688, 1779
DpnII	GATC	9 cut(s)	625, 790, 797, 805, 1258, 1285, 1590, 1686, 1777
DraIII	CACNNNGTG	1 cut(s)	271
EaeI	YGGCCR	1 cut(s)	207
Eam1104I	CTCTTC	2 cut(s)	187, 324
EarI	CTCTTC	2 cut(s)	187, 324
EciI	GGCGGA	3 cut(s)	1296, 1312, 1525
Ecl136II	GAGCTC	1 cut(s)	1702
Eco130I	CCWWGG	1 cut(s)	904
Eco24I	GRGCYC	2 cut(s)	1620, 1704
Eco47I	GGWCC	5 cut(s)	185, 1031, 1138, 1354, 1475
Eco53kI	GAGCTC	1 cut(s)	1702
Eco57I	CTGAAG	3 cut(s)	396, 843, 1200
Eco88I	CYCGRG	1 cut(s)	1512
EcoICRI	GAGCTC	1 cut(s)	1702
EcoO109I	RGGNCCY	4 cut(s)	310, 1031, 1354, 1617
EcoRII	CCWGG	6 cut(s)	157, 187, 306, 402, 793, 1538
EcoT14I	CCWWGG	1 cut(s)	904
EcoT38I	GRGCYC	2 cut(s)	1620, 1704
ErhI	CCWWGG	1 cut(s)	904
FalI	AAGNNNNNCTT	2 cut(s)	1791, 1823
FaqI	GGGAC	1 cut(s)	1124
FauI	CCCGC	1 cut(s)	1607
FbaI	TGATCA	1 cut(s)	625
FblI	GTMKAC	2 cut(s)	1674, 1695
Fnu4HI	GCNGC	8 cut(s)	155, 589, 1310, 1482, 1485, 1497, 1547, 1656
FokI	GGATG	4 cut(s)	338, 524, 1505, 1519
FriOI	GRGCYC	2 cut(s)	1620, 1704
Fsp4HI	GCNGC	8 cut(s)	155, 589, 1310, 1482, 1485, 1497, 1547, 1656
FspBI	CTAG	3 cut(s)	173, 182, 785
GlaI	GCGC	1 cut(s)	1500
GluI	GCNGC	8 cut(s)	155, 589, 1310, 1482, 1485, 1497, 1547, 1656
GsaI	CCCAGC	1 cut(s)	33
GsuI	CTGGAG	1 cut(s)	284
HaeIII	GGCC	6 cut(s)	209, 311, 882, 1110, 1447, 1618
HapII	CCGG	6 cut(s)	63, 1101, 1294, 1438, 1502, 1637
HgaI	GACGC	3 cut(s)	216, 1301, 1593
HhaI	GCGC	1 cut(s)	1501
Hin1I	GRCGYC	3 cut(s)	1604, 1671, 1692
Hin6I	GCGC	1 cut(s)	1499
HinP1I	GCGC	1 cut(s)	1499
HincII	GTYRAC	5 cut(s)	660, 778, 1190, 1675, 1696
HindII	GTYRAC	5 cut(s)	660, 778, 1190, 1675, 1696
HindIII	AAGCTT	3 cut(s)	620, 855, 1272
HinfI	GANTC	8 cut(s)	251, 524, 661, 971, 1133, 1303, 1470, 1508
HpaII	CCGG	6 cut(s)	63, 1101, 1294, 1438, 1502, 1637
HphI	GGTGA	7 cut(s)	70, 80, 1022, 1345, 1528, 1600, 1657
Hpy166II	GTNNAC	8 cut(s)	265, 660, 778, 1190, 1665, 1675, 1696, 1835
Hpy188III	TCNNGA	6 cut(s)	414, 785, 861, 1034, 1357, 1718
Hpy8I	GTNNAC	8 cut(s)	265, 660, 778, 1190, 1665, 1675, 1696, 1835
Hpy99I	CGWCG	7 cut(s)	1317, 1609, 1673, 1676, 1694, 1697, 1700
HpyCH4III	ACNGT	4 cut(s)	47, 355, 746, 1832
HpyCH4IV	ACGT	3 cut(s)	819, 1671, 1692
HpyF10VI	GCNNNNNNNGC	7 cut(s)	151, 854, 1493, 1620, 1646, 1655, 1738
HpyF3I	CTNAG	8 cut(s)	342, 809, 849, 891, 897, 977, 1659, 1716
HpySE526I	ACGT	3 cut(s)	819, 1671, 1692
Hsp92I	GRCGYC	3 cut(s)	1604, 1671, 1692
HspAI	GCGC	1 cut(s)	1499
KpnI	GGTACC	1 cut(s)	1388
KroI	GCCGGC	2 cut(s)	1293, 1636
KroNI	GCCGGC	2 cut(s)	1295, 1638
Ksp22I	TGATCA	1 cut(s)	625
Kzo9I	GATC	9 cut(s)	625, 790, 797, 805, 1258, 1285, 1590, 1686, 1777
LmnI	GCTCC	6 cut(s)	59, 142, 303, 1021, 1344, 1554
Lsp1109I	GCAGC	3 cut(s)	166, 575, 1558
LweI	GCATC	4 cut(s)	442, 656, 1192, 1483
MabI	ACCWGGT	1 cut(s)	402
MaeI	CTAG	3 cut(s)	173, 182, 785
MaeII	ACGT	3 cut(s)	819, 1671, 1692
MaeIII	GTNAC	2 cut(s)	1164, 1316
MalI	GATC	9 cut(s)	627, 792, 799, 807, 1260, 1287, 1592, 1688, 1779
MboI	GATC	9 cut(s)	625, 790, 797, 805, 1258, 1285, 1590, 1686, 1777
MhlI	GDGCHC	3 cut(s)	706, 1620, 1704
MluCI	AATT	8 cut(s)	470, 681, 711, 756, 922, 965, 1558, 1721
MlyI	GAGTC	3 cut(s)	655, 1297, 1502
MmeI	TCCRAC	4 cut(s)	982, 1062, 1305, 1399
MreI	CGCCGGCG	1 cut(s)	1293
MroNI	GCCGGC	2 cut(s)	1293, 1636
MroXI	GAANNNNTTC	3 cut(s)	685, 1044, 1367
MseI	TTAA	1 cut(s)	237
MslI	CAYNNNNRTG	2 cut(s)	1055, 1378
MspA1I	CMGCKG	1 cut(s)	803
MspI	CCGG	6 cut(s)	63, 1101, 1294, 1438, 1502, 1637
MspR9I	CCNGG	6 cut(s)	159, 189, 308, 404, 795, 1540
Mva1269I	GAATGC	1 cut(s)	841
MvaI	CCWGG	6 cut(s)	159, 189, 308, 404, 795, 1540
MvnI	CGCG	3 cut(s)	1312, 1499, 1649
MwoI	GCNNNNNNNGC	7 cut(s)	151, 854, 1493, 1620, 1646, 1655, 1738
NaeI	GCCGGC	2 cut(s)	1295, 1638
NdeII	GATC	9 cut(s)	625, 790, 797, 805, 1258, 1285, 1590, 1686, 1777
NgoMIV	GCCGGC	2 cut(s)	1293, 1636
NmeAIII	GCCGAG	2 cut(s)	1513, 1580
NmuCI	GTSAC	1 cut(s)	1164
NspI	RCATGY	2 cut(s)	263, 392
PaeI	GCATGC	1 cut(s)	392
PcsI	WCGNNNNNNNCGW	4 cut(s)	1088, 1425, 1686, 1695
PctI	GAATGC	1 cut(s)	841
PdiI	GCCGGC	2 cut(s)	1295, 1638
PdmI	GAANNNNTTC	3 cut(s)	685, 1044, 1367
PfeI	GAWTC	5 cut(s)	251, 524, 971, 1133, 1470
PflMI	CCANNNNNTGG	1 cut(s)	1651
PfoI	TCCNGGA	2 cut(s)	187, 793
PkrI	GCNGC	8 cut(s)	156, 590, 1311, 1483, 1486, 1498, 1548, 1657
PleI	GAGTC	3 cut(s)	655, 1297, 1502
PpsI	GAGTC	3 cut(s)	655, 1297, 1502
PpuMI	RGGWCCY	2 cut(s)	1031, 1354
Psp124BI	GAGCTC	1 cut(s)	1704
Psp5II	RGGWCCY	2 cut(s)	1031, 1354
Psp6I	CCWGG	6 cut(s)	157, 187, 306, 402, 793, 1538
PspFI	CCCAGC	1 cut(s)	29
PspGI	CCWGG	6 cut(s)	157, 187, 306, 402, 793, 1538
PspOMI	GGGCCC	1 cut(s)	1616
PspPI	GGNCC	9 cut(s)	185, 310, 881, 1031, 1138, 1354, 1475, 1616, 1617
PspPPI	RGGWCCY	2 cut(s)	1031, 1354
PstI	CTGCAG	2 cut(s)	753, 1625
PstNI	CAGNNNCTG	1 cut(s)	313
PvuII	CAGCTG	1 cut(s)	803
RsaI	GTAC	4 cut(s)	264, 337, 1386, 1829
RsaNI	GTAC	4 cut(s)	263, 336, 1385, 1828
RseI	CAYNNNNRTG	2 cut(s)	1055, 1378
SacI	GAGCTC	1 cut(s)	1704
SalI	GTCGAC	2 cut(s)	1673, 1694
SaqAI	TTAA	1 cut(s)	237
SatI	GCNGC	8 cut(s)	155, 589, 1310, 1482, 1485, 1497, 1547, 1656
Sau3AI	GATC	9 cut(s)	625, 790, 797, 805, 1258, 1285, 1590, 1686, 1777
Sau96I	GGNCC	9 cut(s)	185, 310, 881, 1031, 1138, 1354, 1475, 1616, 1617
SbfI	CCTGCAGG	1 cut(s)	1625
SchI	GAGTC	3 cut(s)	655, 1297, 1502
ScrFI	CCNGG	6 cut(s)	159, 189, 308, 404, 795, 1540
SdaI	CCTGCAGG	1 cut(s)	1625
SduI	GDGCHC	3 cut(s)	706, 1620, 1704
SexAI	ACCWGGT	1 cut(s)	402
SfaNI	GCATC	4 cut(s)	442, 656, 1192, 1483
SfcI	CTRYAG	2 cut(s)	749, 1621
SgrAI	CRCCGGYG	1 cut(s)	1293
SgrDI	CGTCGACG	1 cut(s)	1694
SinI	GGWCC	5 cut(s)	185, 1031, 1138, 1354, 1475
SmiMI	CAYNNNNRTG	2 cut(s)	1055, 1378
SmlI	CTYRAG	1 cut(s)	1808
SmoI	CTYRAG	1 cut(s)	1808
SphI	GCATGC	1 cut(s)	392
Sse8387I	CCTGCAGG	1 cut(s)	1625
Sse9I	AATT	8 cut(s)	470, 681, 711, 756, 922, 965, 1558, 1721
SspMI	CTAG	3 cut(s)	173, 182, 785
SstI	GAGCTC	1 cut(s)	1704
StyD4I	CCNGG	6 cut(s)	157, 187, 306, 402, 793, 1538
StyI	CCWWGG	1 cut(s)	904
TaaI	ACNGT	4 cut(s)	47, 355, 746, 1832
TaiI	ACGT	3 cut(s)	822, 1674, 1695
TaqI	TCGA	5 cut(s)	399, 1593, 1674, 1689, 1695
TaqII	GACCGA	2 cut(s)	1126, 1187
TasI	AATT	8 cut(s)	470, 681, 711, 756, 922, 965, 1558, 1721
TatI	WGTACW	1 cut(s)	262
TauI	GCSGC	5 cut(s)	1312, 1484, 1487, 1499, 1658
TfiI	GAWTC	5 cut(s)	251, 524, 971, 1133, 1470
Tru1I	TTAA	1 cut(s)	237
Tru9I	TTAA	1 cut(s)	237
TscAI	CASTG	2 cut(s)	253, 817
TseFI	GTSAC	1 cut(s)	1164
TseI	GCWGC	3 cut(s)	154, 588, 1546
Tsp45I	GTSAC	1 cut(s)	1164
TspDTI	ATGAA	8 cut(s)	56, 182, 342, 455, 866, 1130, 1467, 1618
TspGWI	ACGGA	3 cut(s)	524, 971, 1552
TspRI	CASTG	2 cut(s)	253, 817
Van91I	CCANNNNNTGG	1 cut(s)	1651
VpaK11BI	GGWCC	5 cut(s)	185, 1031, 1138, 1354, 1475
XapI	RAATTY	2 cut(s)	922, 1721
XbaI	TCTAGA	1 cut(s)	784
XceI	RCATGY	2 cut(s)	263, 392
XmiI	GTMKAC	2 cut(s)	1674, 1695
XmnI	GAANNNNTTC	3 cut(s)	685, 1044, 1367
XspI	CTAG	3 cut(s)	173, 182, 785
ZraI	GACGTC	2 cut(s)	1672, 1693

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.