Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0004461

Physical Location & Seq

Genomic Coordinates Forward (+)

38186584 .. 38189522

Gene Structure 2939 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g51530.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1995 bp

ATGACTTCATACTCCATCGATTCCCCTCCTGCCAGTAAACACCGTAGCCGCCGCAAAAGCAAACACAACCCCGTCAATGCCGACCCTCACTCCGAACCCGACCAGAACCCGCCGCCGCGCCTCACTCGAGACCAATCGCTGCGGCTGCCAACGGACCCTCATGTTCGGATCGGAATGTACGTGGCACTGGCCCACGCCGGACTAGCCTTCTCACTCGCGCTCCTCTACGGCGTCATGAAGCTTCTAGGAGGGTACTGGCGCCCTATTCAATGGGCCATTCTGTGTTCCATGCCTCTCCGCGAGCTCCACACTGCTCTCGTCTCGTTCTGGTCCGACTCTCTCAATCTCGGCCTTCTTGAAACCCTCTTTGCGATCCCATGCGCCGCCGTACGTGCCACCACCGCCTCCCTCGTCGACTCCCGCTCCGCCATTTGCTGCCTCCTCAAACGCCCTAGCCCACCTCGCCCGAAAAAGAATTTCAGCTTCTCGAAAATTGTTCAATGGCTGATCTCATTTGCCCTATTTGTGATTATCTACGAGAACATAGGCGTTTACACTCTGCCAGCATTTTTAGTTGCTTGCTTTGTAGCTTATGTTTTGGGTGGCAGAAGCATAGTGATCGATCCTAGTGTGACCACTACACTTTCGGCACTTTCGCGGCGCAGTAACAGGTTGAAACTGAGGAATACCAATAGGCTTAGCAGGTACATTACCAATTTTATGTTCAAAAGGTTGAAGACGACGGTTGCTATCAGCTTGATCATGGTTATGATAATAGGGACTTTGGTTGGGATGGTTTTCTTTTCGTATAAGATTGGAATAGAAGGGAAGCTTGCTGTGATTTTGATGAAAAGGCATTTGGAGCACCAATTGGAGCAGAATTACAACTATGCTGAGAAGGTTGGGTTGAAGAAATGGATGGATGAGAATCAAATACCGGAGTTTATCGATGATTATGCAATGAAGTTTTATGAGGCAGTGTTGCAGAATATCAATTCTTGGGCAGCGGATTACAATGCAACTGAGATTGTGGACAATATGAGGCATTATCTGACTAGTAATGATTCTTCTCCTTTTGACATTAGGAGTAATGGCAGCGTTGGTGATGTTGATCATGAGCAGAATATTAGCAATATCAATCAACTTTTGTCTGAGAAATTTCATAGCATTCAATCGAGACTGAGGAACAAAGAATGGGTTGTGATATATAGGGCTATTGATGATATTTTTCACTTTAAGGAATTCATGTCTATGATTGCTAAGGAAGACTTGGCAAAGAAAATCAAAACAGTTTTGTTACATGGATTGAACCTCTCAAGAAGGTTACTTACTAGTAGTATTACGGTTTTGGCGGGAGGTGCAAACGTAGTGTTGTTCATGGCGGTCTCACTTGTTTCCGGAGCTGCTGGATTGTTCAATTTCCTATTCGAATTGACAATGTTCTTTTGGCTTTTGTATTACCTAATCACCACAGACTCGGGAGGTGTTATGGATCATGTTTTAGGGATGTTGCCACTTTCAAGATTGACAAGGGATAGATGTGCCCAAGTGCTTGATCATGTTGTTAGCAGTGTGTTGTTGGCTGCTGCTAAGGTCACATTCTTTCAAGGATGTCTCACCTATCTCTTGTTTAGATTCTACCATATTCATTTCATGTACATGTCTACATCCCTTGCCATGATGAGTGCCGTTTTGCAAATTACACCGAATTGGCTTTTGTCAATCCCGGCGGCACTGCAGCTCGGCATGGAAGCTAAATATATTGACGCCATTTTGTTGACAACATTTCATCAAATACTGCTGGAATATGGAACTGCTGCTATCCAAGATGAGATTCCAGGACAGAATGCCTACCTCACCGGCCTTAGCATACTTGGTGGCATTGCTCTTTTCCCATCCATGATAGAAGGAGCAATTATGGGTCCTTTGCTGATGACAGTCATGATTGCTTTCAAAAATCTTTATGTAGAATTCGTTCTTGCTTCTGCACAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AI-2E_transport

Protein Analysis

665

Amino Acids

74.65

Weight (kDa)

9.17

Isoelectric Point (pI)

43.32

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004461)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55960
fragaria_vesca	FvH4_3g42400 FvH4_6g51530
malus_domestica	MD11G1036300.v1.1 MD17G1026100.v1.1
prunus_persica	Prupe.3G292600_v2.0.a1 Prupe.6G027100_v2.0.a1
pyrus_communis	pycom17g02120
rosa_chinensis	RchiOBHm_Chr5g0075891
rosa_laevigata	RLG00000022165 RLG00000036599
rosa_multiflora	Rmu_co8453001.1_g000001 Rmu_co8486383.1_g000001 Rmu_sc0002652.1_g000019
rosa_roxburghii	Rroxscaffold_1G00005790 Rroxscaffold_2G00079170 Rroxscaffold_2G00128200 Rroxscaffold_2G00128210 Rroxscaffold_3G00229540 Rroxscaffold_5G00350470
rosa_rugosa	Rorug02G0565800 Rorug05G0443300
rosa_samantha	Rh2AG646000 Rh2BG656700 Rh2CG621800 Rh2DG670100 Rh5AG500200 Rh5BG521300 Rh5CG545400 Rh5DG534100
rosa_wichuraiana	Rw2G053050 Rw5G046430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	693
AccB1I	GGYRCC	1 cut(s)	258
AccBSI	CCGCTC	1 cut(s)	423
AccI	GTMKAC	2 cut(s)	414, 1664
AccII	CGCG	4 cut(s)	118, 218, 300, 658
AccIII	TCCGGA	1 cut(s)	1397
AclWI	GGATC	4 cut(s)	176, 367, 617, 1500
AcsI	RAATTY	4 cut(s)	475, 1157, 1241, 1970
AcyI	GRCGYC	3 cut(s)	231, 259, 1767
AfaI	GTAC	5 cut(s)	179, 254, 390, 707, 1658
AflIII	ACRYGT	1 cut(s)	1659
AhlI	ACTAGT	2 cut(s)	1055, 1331
AjnI	CCWGG	1 cut(s)	1837
AjuI	GAANNNNNNNTTGG	6 cut(s)	707, 739, 842, 874, 1818, 1850
AluBI	AGCT	9 cut(s)	241, 304, 483, 590, 756, 832, 1403, 1741, 1754
AluI	AGCT	9 cut(s)	241, 304, 483, 590, 756, 832, 1403, 1741, 1754
Alw21I	GWGCWC	2 cut(s)	306, 867
Alw26I	GTCTC	5 cut(s)	123, 325, 1171, 1390, 1619
AlwI	GGATC	4 cut(s)	176, 367, 617, 1500
Ama87I	CYCGRG	2 cut(s)	126, 1477
Aor13HI	TCCGGA	1 cut(s)	1397
AoxI	GGCC	4 cut(s)	189, 273, 349, 1861
ApoI	RAATTY	4 cut(s)	475, 1157, 1241, 1970
Asp700I	GAANNNNTTC	1 cut(s)	1974
AspLEI	GCGC	5 cut(s)	120, 220, 261, 383, 663
AspS9I	GGNCC	5 cut(s)	154, 190, 273, 330, 1922
AsuC2I	CCSGG	1 cut(s)	1727
AsuHPI	GGTGA	4 cut(s)	1115, 1459, 1609, 1849
AsuII	TTCGAA	1 cut(s)	1428
AvaI	CYCGRG	2 cut(s)	126, 1477
AvaII	GGWCC	3 cut(s)	154, 330, 1922
BaeGI	GKGCMC	1 cut(s)	1546
BanI	GGYRCC	1 cut(s)	258
BanII	GRGCYC	1 cut(s)	306
BarI	GAAGNNNNNNTAC	4 cut(s)	1051, 1083, 1312, 1344
BbsI	GAAGAC	2 cut(s)	743, 1272
Bbv12I	GWGCWC	2 cut(s)	306, 867
BccI	CCATC	4 cut(s)	23, 787, 913, 1903
BceAI	ACGGC	3 cut(s)	244, 371, 1673
BcgI	CGANNNNNNTGC	4 cut(s)	601, 635, 938, 972
BciT130I	CCWGG	1 cut(s)	1839
BclI	TGATCA	3 cut(s)	759, 1111, 1555
BcnI	CCSGG	1 cut(s)	1727
BcoDI	GTCTC	5 cut(s)	123, 325, 1171, 1390, 1619
BcuI	ACTAGT	2 cut(s)	1055, 1331
BfaI	CTAG	6 cut(s)	203, 245, 453, 627, 1056, 1332
BfmI	CTRYAG	1 cut(s)	1736
BfoI	RGCGCY	1 cut(s)	262
BfuAI	ACCTGC	1 cut(s)	693
BlpI	GCTNAGC	1 cut(s)	698
Bme1390I	CCNGG	2 cut(s)	1727, 1839
Bme18I	GGWCC	3 cut(s)	154, 330, 1922
BmeT110I	CYCGRG	2 cut(s)	126, 1477
BmgT120I	GGNCC	5 cut(s)	154, 190, 273, 330, 1922
BmiI	GGNNCC	3 cut(s)	156, 260, 1923
BmrFI	CCNGG	2 cut(s)	1727, 1839
BpiI	GAAGAC	2 cut(s)	743, 1272
Bpu10I	CCTNAGC	3 cut(s)	1260, 1590, 1865
Bpu1102I	GCTNAGC	1 cut(s)	698
Bpu14I	TTCGAA	1 cut(s)	1428
BpuEI	CTTGAG	1 cut(s)	1300
BpuMI	CCSGG	1 cut(s)	1727
Bsa29I	ATCGAT	3 cut(s)	18, 621, 948
BsaAI	YACGTR	2 cut(s)	181, 392
BsaBI	GATNNNNATC	2 cut(s)	927, 1110
BsaHI	GRCGYC	3 cut(s)	231, 259, 1767
BsaI	GGTCTC	2 cut(s)	123, 1390
BsaWI	WCCGGW	2 cut(s)	937, 1397
BsaXI	ACNNNNNCTCC	6 cut(s)	74, 104, 204, 234, 407, 437
Bse118I	RCCGGY	1 cut(s)	1859
Bse1I	ACTGG	3 cut(s)	33, 192, 260
Bse3DI	GCAATG	2 cut(s)	966, 1881
Bse8I	GATNNNNATC	2 cut(s)	927, 1110
BseAI	TCCGGA	1 cut(s)	1397
BseBI	CCWGG	1 cut(s)	1839
BseCI	ATCGAT	3 cut(s)	18, 621, 948
BseGI	GGATG	7 cut(s)	798, 924, 928, 1512, 1616, 1667, 1895
BseJI	GATNNNNATC	2 cut(s)	927, 1110
BseMI	GCAATG	2 cut(s)	966, 1881
BseMII	CTCAG	5 cut(s)	671, 885, 1014, 1143, 1172
BseNI	ACTGG	3 cut(s)	33, 192, 260
BseRI	GAGGAG	2 cut(s)	212, 431
BseSI	GKGCMC	1 cut(s)	1546
BsgI	GTGCAG	1 cut(s)	1971
Bsh1236I	CGCG	4 cut(s)	118, 218, 300, 658
BshFI	GGCC	4 cut(s)	191, 275, 351, 1863
BshNI	GGYRCC	1 cut(s)	258
BshVI	ATCGAT	3 cut(s)	18, 621, 948
BsiHKAI	GWGCWC	2 cut(s)	306, 867
BsiHKCI	CYCGRG	2 cut(s)	126, 1477
BsiSI	CCGG	5 cut(s)	198, 938, 1398, 1727, 1860
BsiWI	CGTACG	1 cut(s)	388
BslFI	GGGAC	1 cut(s)	793
BsmAI	GTCTC	5 cut(s)	123, 325, 1171, 1390, 1619
BsmBI	CGTCTC	1 cut(s)	325
BsmFI	GGGAC	1 cut(s)	793
BsmI	GAATGC	2 cut(s)	1167, 1852
BsnI	GGCC	4 cut(s)	191, 275, 351, 1863
Bso31I	GGTCTC	2 cut(s)	123, 1390
BsoBI	CYCGRG	2 cut(s)	126, 1477
Bsp119I	TTCGAA	1 cut(s)	1428
Bsp1286I	GDGCHC	3 cut(s)	306, 867, 1546
Bsp13I	TCCGGA	1 cut(s)	1397
Bsp1407I	TGTACA	1 cut(s)	1656
Bsp143I	GATC	9 cut(s)	168, 372, 507, 618, 622, 759, 1111, 1492, 1555
Bsp1720I	GCTNAGC	1 cut(s)	698
BspANI	GGCC	4 cut(s)	191, 275, 351, 1863
BspCNI	CTCAG	5 cut(s)	672, 886, 1015, 1144, 1173
BspDI	ATCGAT	3 cut(s)	18, 621, 948
BspEI	TCCGGA	1 cut(s)	1397
BspFNI	CGCG	4 cut(s)	118, 218, 300, 658
BspHI	TCATGA	3 cut(s)	234, 1114, 1941
BspLI	GGNNCC	3 cut(s)	156, 260, 1923
BspMAI	CTGCAG	1 cut(s)	1740
BspMI	ACCTGC	1 cut(s)	693
BspPI	GGATC	4 cut(s)	176, 367, 617, 1500
BspT104I	TTCGAA	1 cut(s)	1428
BspT107I	GGYRCC	1 cut(s)	258
BspTNI	GGTCTC	2 cut(s)	123, 1390
BsrBI	CCGCTC	1 cut(s)	423
BsrDI	GCAATG	2 cut(s)	966, 1881
BsrFI	RCCGGY	1 cut(s)	1859
BsrGI	TGTACA	1 cut(s)	1656
BsrI	ACTGG	3 cut(s)	33, 192, 260
BssAI	RCCGGY	1 cut(s)	1859
BssMI	GATC	9 cut(s)	168, 372, 507, 618, 622, 759, 1111, 1492, 1555
BssNI	GRCGYC	3 cut(s)	231, 259, 1767
Bst2UI	CCWGG	1 cut(s)	1839
Bst4CI	ACNGT	6 cut(s)	44, 745, 1291, 1345, 1939, 1992
BstACI	GRCGYC	3 cut(s)	231, 259, 1767
BstAUI	TGTACA	1 cut(s)	1656
BstBAI	YACGTR	2 cut(s)	181, 392
BstBI	TTCGAA	1 cut(s)	1428
BstC8I	GCNNGC	4 cut(s)	302, 564, 580, 834
BstDEI	CTNAG	9 cut(s)	680, 698, 894, 1023, 1152, 1181, 1260, 1590, 1865
BstF5I	GGATG	7 cut(s)	798, 924, 928, 1512, 1616, 1667, 1895
BstFNI	CGCG	4 cut(s)	118, 218, 300, 658
BstH2I	RGCGCY	1 cut(s)	262
BstHHI	GCGC	5 cut(s)	120, 220, 261, 383, 663
BstKTI	GATC	9 cut(s)	171, 375, 510, 621, 625, 762, 1114, 1495, 1558
BstMAI	GTCTC	5 cut(s)	123, 325, 1171, 1390, 1619
BstMBI	GATC	9 cut(s)	168, 372, 507, 618, 622, 759, 1111, 1492, 1555
BstMWI	GCNNNNNNNGC	8 cut(s)	57, 145, 203, 392, 401, 462, 862, 1358
BstNI	CCWGG	1 cut(s)	1839
BstNSI	RCATGY	1 cut(s)	1663
BstSCI	CCNGG	2 cut(s)	1725, 1837
BstSFI	CTRYAG	1 cut(s)	1736
BstSLI	GKGCMC	1 cut(s)	1546
BstUI	CGCG	4 cut(s)	118, 218, 300, 658
BstV2I	GAAGAC	2 cut(s)	743, 1272
Bsu15I	ATCGAT	3 cut(s)	18, 621, 948
BsuRI	GGCC	4 cut(s)	191, 275, 351, 1863
BsuTUI	ATCGAT	3 cut(s)	18, 621, 948
BtsCI	GGATG	7 cut(s)	798, 924, 928, 1512, 1616, 1667, 1895
BtsI	GCAGTG	4 cut(s)	309, 984, 1576, 1733
BtsIMutI	CAGTG	5 cut(s)	185, 309, 984, 1576, 1733
BveI	ACCTGC	1 cut(s)	693
Cac8I	GCNNGC	4 cut(s)	302, 564, 580, 834
CciI	TCATGA	3 cut(s)	234, 1114, 1941
CfoI	GCGC	5 cut(s)	120, 220, 261, 383, 663
Cfr10I	RCCGGY	1 cut(s)	1859
Cfr13I	GGNCC	5 cut(s)	154, 190, 273, 330, 1922
ClaI	ATCGAT	3 cut(s)	18, 621, 948
CseI	GACGC	2 cut(s)	220, 1775
Csp6I	GTAC	5 cut(s)	178, 253, 389, 706, 1657
CviQI	GTAC	5 cut(s)	178, 253, 389, 706, 1657
DdeI	CTNAG	9 cut(s)	680, 698, 894, 1023, 1152, 1181, 1260, 1590, 1865
DinI	GGCGCC	1 cut(s)	260
DpnI	GATC	9 cut(s)	170, 374, 509, 620, 624, 761, 1113, 1494, 1557
DpnII	GATC	9 cut(s)	168, 372, 507, 618, 622, 759, 1111, 1492, 1555
EciI	GGCGGA	1 cut(s)	415
Ecl136II	GAGCTC	1 cut(s)	304
Eco24I	GRGCYC	1 cut(s)	306
Eco31I	GGTCTC	2 cut(s)	123, 1390
Eco47I	GGWCC	3 cut(s)	154, 330, 1922
Eco53kI	GAGCTC	1 cut(s)	304
Eco88I	CYCGRG	2 cut(s)	126, 1477
EcoICRI	GAGCTC	1 cut(s)	304
EcoO109I	RGGNCCY	1 cut(s)	1922
EcoRI	GAATTC	2 cut(s)	1241, 1970
EcoRII	CCWGG	1 cut(s)	1837
EcoT38I	GRGCYC	1 cut(s)	306
EgeI	GGCGCC	1 cut(s)	260
EheI	GGCGCC	1 cut(s)	260
Esp3I	CGTCTC	1 cut(s)	325
FalI	AAGNNNNNCTT	4 cut(s)	816, 848, 1253, 1285
FaqI	GGGAC	1 cut(s)	793
FauI	CCCGC	3 cut(s)	117, 428, 1345
FbaI	TGATCA	3 cut(s)	759, 1111, 1555
FblI	GTMKAC	2 cut(s)	414, 1664
FokI	GGATG	7 cut(s)	805, 931, 935, 1519, 1623, 1654, 1882
FriOI	GRGCYC	1 cut(s)	306
FspBI	CTAG	6 cut(s)	203, 245, 453, 627, 1056, 1332
GlaI	GCGC	5 cut(s)	119, 219, 260, 382, 662
HaeII	RGCGCY	1 cut(s)	262
HaeIII	GGCC	4 cut(s)	191, 275, 351, 1863
HapII	CCGG	5 cut(s)	198, 938, 1398, 1727, 1860
HgaI	GACGC	2 cut(s)	220, 1775
HhaI	GCGC	5 cut(s)	120, 220, 261, 383, 663
Hin1I	GRCGYC	3 cut(s)	231, 259, 1767
Hin6I	GCGC	5 cut(s)	118, 218, 259, 381, 661
HinP1I	GCGC	5 cut(s)	118, 218, 259, 381, 661
HincII	GTYRAC	2 cut(s)	415, 1779
HindII	GTYRAC	2 cut(s)	415, 1779
HindIII	AAGCTT	2 cut(s)	239, 830
HinfI	GANTC	8 cut(s)	20, 335, 416, 928, 1064, 1475, 1635, 1834
HpaII	CCGG	5 cut(s)	198, 938, 1398, 1727, 1860
HphI	GGTGA	4 cut(s)	1115, 1459, 1609, 1849
Hpy166II	GTNNAC	6 cut(s)	38, 415, 553, 1033, 1665, 1779
Hpy188I	TCNGA	6 cut(s)	94, 168, 173, 334, 1053, 1153
Hpy8I	GTNNAC	6 cut(s)	38, 415, 553, 1033, 1665, 1779
Hpy99I	CGWCG	2 cut(s)	416, 745
HpyAV	CCTTC	6 cut(s)	217, 362, 818, 892, 1314, 1901
HpyCH4III	ACNGT	6 cut(s)	44, 745, 1291, 1345, 1939, 1992
HpyCH4IV	ACGT	3 cut(s)	180, 391, 1365
HpyCH4V	TGCA	7 cut(s)	959, 985, 1019, 1361, 1696, 1738, 1988
HpyF10VI	GCNNNNNNNGC	8 cut(s)	57, 145, 203, 392, 401, 462, 862, 1358
HpyF3I	CTNAG	9 cut(s)	680, 698, 894, 1023, 1152, 1181, 1260, 1590, 1865
HpySE526I	ACGT	3 cut(s)	180, 391, 1365
Hsp92I	GRCGYC	3 cut(s)	231, 259, 1767
HspAI	GCGC	5 cut(s)	118, 218, 259, 381, 661
KasI	GGCGCC	1 cut(s)	258
Kpn2I	TCCGGA	1 cut(s)	1397
Ksp22I	TGATCA	3 cut(s)	759, 1111, 1555
Kzo9I	GATC	9 cut(s)	168, 372, 507, 618, 622, 759, 1111, 1492, 1555
LmnI	GCTCC	7 cut(s)	225, 309, 428, 862, 874, 1400, 1910
MaeI	CTAG	6 cut(s)	203, 245, 453, 627, 1056, 1332
MaeII	ACGT	3 cut(s)	180, 391, 1365
MaeIII	GTNAC	5 cut(s)	631, 665, 1296, 1323, 1594
MalI	GATC	9 cut(s)	170, 374, 509, 620, 624, 761, 1113, 1494, 1557
MbiI	CCGCTC	1 cut(s)	423
MboI	GATC	9 cut(s)	168, 372, 507, 618, 622, 759, 1111, 1492, 1555
MboII	GAAGA	4 cut(s)	748, 922, 1059, 1277
MfeI	CAATTG	1 cut(s)	869
MhlI	GDGCHC	3 cut(s)	306, 867, 1546
Mly113I	GGCGCC	1 cut(s)	259
MlyI	GAGTC	3 cut(s)	329, 410, 1469
MmeI	TCCRAC	1 cut(s)	357
MroI	TCCGGA	1 cut(s)	1397
MroXI	GAANNNNTTC	1 cut(s)	1974
MseI	TTAA	1 cut(s)	1236
MslI	CAYNNNNRTG	3 cut(s)	767, 1250, 1658
MspA1I	CMGCKG	1 cut(s)	1007
MspI	CCGG	5 cut(s)	198, 938, 1398, 1727, 1860
MspR9I	CCNGG	2 cut(s)	1727, 1839
MunI	CAATTG	1 cut(s)	869
Mva1269I	GAATGC	2 cut(s)	1167, 1852
MvaI	CCWGG	1 cut(s)	1839
MvnI	CGCG	4 cut(s)	118, 218, 300, 658
MwoI	GCNNNNNNNGC	8 cut(s)	57, 145, 203, 392, 401, 462, 862, 1358
NarI	GGCGCC	1 cut(s)	259
NciI	CCSGG	1 cut(s)	1727
NdeII	GATC	9 cut(s)	168, 372, 507, 618, 622, 759, 1111, 1492, 1555
NlaIV	GGNNCC	3 cut(s)	156, 260, 1923
NmeAIII	GCCGAG	2 cut(s)	327, 1722
NmuCI	GTSAC	2 cut(s)	631, 1594
NspI	RCATGY	1 cut(s)	1663
NspV	TTCGAA	1 cut(s)	1428
PaeR7I	CTCGAG	1 cut(s)	126
PagI	TCATGA	3 cut(s)	234, 1114, 1941
PciI	ACATGT	1 cut(s)	1659
PcsI	WCGNNNNNNNCGW	1 cut(s)	177
PctI	GAATGC	2 cut(s)	1167, 1852
PdmI	GAANNNNTTC	1 cut(s)	1974
PfeI	GAWTC	5 cut(s)	20, 928, 1064, 1635, 1834
Pfl23II	CGTACG	1 cut(s)	388
PfoI	TCCNGGA	1 cut(s)	1837
PleI	GAGTC	3 cut(s)	329, 410, 1469
PluTI	GGCGCC	1 cut(s)	262
PpsI	GAGTC	3 cut(s)	329, 410, 1469
Ppu21I	YACGTR	2 cut(s)	181, 392
PpuMI	RGGWCCY	1 cut(s)	1922
PscI	ACATGT	1 cut(s)	1659
Psp124BI	GAGCTC	1 cut(s)	306
Psp5II	RGGWCCY	1 cut(s)	1922
Psp6I	CCWGG	1 cut(s)	1837
PspGI	CCWGG	1 cut(s)	1837
PspLI	CGTACG	1 cut(s)	388
PspN4I	GGNNCC	3 cut(s)	156, 260, 1923
PspPI	GGNCC	5 cut(s)	154, 190, 273, 330, 1922
PspPPI	RGGWCCY	1 cut(s)	1922
PsrI	GAACNNNNNNTAC	2 cut(s)	1959, 1991
PstI	CTGCAG	1 cut(s)	1740
RsaI	GTAC	5 cut(s)	179, 254, 390, 707, 1658
RsaNI	GTAC	5 cut(s)	178, 253, 389, 706, 1657
RseI	CAYNNNNRTG	3 cut(s)	767, 1250, 1658
SacI	GAGCTC	1 cut(s)	306
SalI	GTCGAC	1 cut(s)	413
SaqAI	TTAA	1 cut(s)	1236
Sau3AI	GATC	9 cut(s)	168, 372, 507, 618, 622, 759, 1111, 1492, 1555
Sau96I	GGNCC	5 cut(s)	154, 190, 273, 330, 1922
SchI	GAGTC	3 cut(s)	329, 410, 1469
ScrFI	CCNGG	2 cut(s)	1727, 1839
SduI	GDGCHC	3 cut(s)	306, 867, 1546
SfcI	CTRYAG	1 cut(s)	1736
SfoI	GGCGCC	1 cut(s)	260
Sfr274I	CTCGAG	1 cut(s)	126
SfuI	TTCGAA	1 cut(s)	1428
SinI	GGWCC	3 cut(s)	154, 330, 1922
SlaI	CTCGAG	1 cut(s)	126
SmiMI	CAYNNNNRTG	3 cut(s)	767, 1250, 1658
SmlI	CTYRAG	2 cut(s)	126, 1315
SmoI	CTYRAG	2 cut(s)	126, 1315
SpeI	ACTAGT	2 cut(s)	1055, 1331
SspDI	GGCGCC	1 cut(s)	258
SspI	AATATT	1 cut(s)	1126
SspMI	CTAG	6 cut(s)	203, 245, 453, 627, 1056, 1332
SstI	GAGCTC	1 cut(s)	306
StyD4I	CCNGG	2 cut(s)	1725, 1837
TaaI	ACNGT	6 cut(s)	44, 745, 1291, 1345, 1939, 1992
TaiI	ACGT	3 cut(s)	183, 394, 1368
TaqI	TCGA	8 cut(s)	18, 127, 414, 488, 621, 948, 1175, 1428
TatI	WGTACW	1 cut(s)	1656
TauI	GCSGC	8 cut(s)	51, 54, 115, 118, 145, 386, 661, 1733
TfiI	GAWTC	5 cut(s)	20, 928, 1064, 1635, 1834
Tru1I	TTAA	1 cut(s)	1236
Tru9I	TTAA	1 cut(s)	1236
TscAI	CASTG	5 cut(s)	192, 316, 984, 1576, 1740
TseFI	GTSAC	2 cut(s)	631, 1594
Tsp45I	GTSAC	2 cut(s)	631, 1594
TspDTI	ATGAA	9 cut(s)	251, 863, 977, 1151, 1234, 1366, 1637, 1642, 1778
TspGWI	ACGGA	1 cut(s)	167
TspRI	CASTG	5 cut(s)	192, 316, 984, 1576, 1740
VpaK11BI	GGWCC	3 cut(s)	154, 330, 1922
XapI	RAATTY	4 cut(s)	475, 1157, 1241, 1970
XceI	RCATGY	1 cut(s)	1663
XhoI	CTCGAG	1 cut(s)	126
XmiI	GTMKAC	2 cut(s)	414, 1664
XmnI	GAANNNNTTC	1 cut(s)	1974
XspI	CTAG	6 cut(s)	203, 245, 453, 627, 1056, 1332

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.