Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0004461

Physical Location & Seq

Genomic Coordinates Reverse (-)

2231099 .. 2233493

Gene Structure 2395 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00079170.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1908 bp

ATGACGTCACACACCACCTATTCCCCTCCTCCCATTATGCACCGTGGCCGCCGCCGCAAAAGAAAACCCGACCCCGTCGATGCCGACCCTCACTCCGAACCAGAACCCGAACCGCACCCGCCGCCGCGCCTCACCCGAGACCAATCGTTGCGGCTGCCGACCGACCCACACGTTCGGATCGGAATGTACGTGGCCCTGGCCCACGCCGGACTAGCTTTCTCACTCGCGCTCCTCTACGGCGTCACGAAGCTTCTAGAAGGCTACTGGCGCCCAATCCAATGGGCCATTCTCTGTTCTATGCCTCTCCGCGAGCTCCACACTGCTCTGGTTTCGTTCTGGTCTGACTCTCTCAATCTTGGCCTGTTCGAAACCCTCATTGCGCTCCCACGCGCCGCTGTACGCGCCACCACAGCCTCCCTCGTTGACTCCCGCACCGCCATTCACCGCCTCCTCAAACGCCCCTGCCCGCCTCCCCCGAAAAAGAATTTCAGGCAAGCTTATGTTTTGGGTTACAGAAGCATAGTGATCGAACCTGGTGTGACTACTACACTTTCGGCACTTTCGCGCCGAGGAAGTAGGTTGAAACTGAGGAATAGTAACAGGGTTAGCAGGTACATTACTAGTTTGATGCTCAAAAGGCTGAAGACGACGGTTGCGATTGGCTTGATCATGGTTATGATAGTGGGGACTTTGTTTGGGATGGTTTTCTTTTCGTATAAGATTGGAATGGAAGGGAAGTTTGCTGTGATTTCGATGAAAGTTCATTTGGAACACCAATTGGAGCAGAATTACAACTATGCGGAGAGGGTTGGGTTGAAGAAATGGATGGATGAGAATCAAATTCCAGAGTTGATTGATGATTATGCGACCAAGTTTTATGAGACAGTGTTGCTGAATATCGATTCTTGGGCGGCGGATTACAATGTGACTGAGATTGTGGACAGTCTGAGGCATTATTTGACTAGTAATGATTCTTCTCCAGTCGACATTTCGAGTAATGGTGGTGTTGGCAATGTTGATCATAAGCAGATCAATAGTAATATCAATCAGCCCTTGTCCGAGAAGTTTCATAACATTCAATCGAGGGTGAGGAACAGAGAATGGGGAGTGATCTATAGGGATATTGATGACATTTTTCATTTTGGGAAATTCATGTCTATGATTGCTAAGGAAGACTTGGCAGAGAAAGCGAAAGCATATTTGTTACAGGGATTGGACATTTCGAGAAGGTTACTTACTAGTAGTACTACGGTTTTGGCCGGAGGTGCAAATATTTTGCTGTTCATGGCAGTCTCACTTGTTTCAGGTGCTGCTGGATTGTTCAATTTCATCTTTGAATTGACAGTGTTCTTCTGGCTTCTGTATTACCTAATCACCACGGACTCGGGAGGTGTTATGGATCATGTTTTGGGGATGCTGCCACTTTCAAGATCGACGAGGGTTAGATGTGCCCAAGTGCTTGATCATGCTGTTAGCAGTGTGCTGTTGGCTGCTGCTAAGGTCACATTCTTTCAAGGATGCCTCACATATCTCTTGTTCAGATTCTACCAGATACATTTCCTGTACATGTCTACATCCCTTGCCCTGATGAGTGCCGTTTTGCAAATTACACCGGCTTGGCTTTTGTCAATCCCGGCAGCGCTGCAACTGGGCATGGAAGCGAAATATCTAGACGCCATTTTGTTGACATCAATCCATCAAATACTGCTGGAATATGGAACTGCTGCTATCCAAGATGAGATTCCAGGACAGAATGCCTACCTCACCGGGCTTAGCATACTTGGTGGCATTGCTCTTTTCCCATCCATGTTAGAAGTAATTTACTCTTCTTCCCTAATGTTTATAATGCTTGCATTTAATGTAAGACGCATTTTAATAAACACATTAGCTAGCTTAAAATTAAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AI-2E_transport

Protein Analysis

635

Amino Acids

71.33

Weight (kDa)

9.41

Isoelectric Point (pI)

46.09

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004461)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55960
fragaria_vesca	FvH4_3g42400 FvH4_6g51530
malus_domestica	MD11G1036300.v1.1 MD17G1026100.v1.1
prunus_persica	Prupe.3G292600_v2.0.a1 Prupe.6G027100_v2.0.a1
pyrus_communis	pycom17g02120
rosa_chinensis	RchiOBHm_Chr5g0075891
rosa_laevigata	RLG00000022165 RLG00000036599
rosa_multiflora	Rmu_co8453001.1_g000001 Rmu_co8486383.1_g000001 Rmu_sc0002652.1_g000019
rosa_roxburghii	Rroxscaffold_1G00005790 Rroxscaffold_2G00079170 Rroxscaffold_2G00128200 Rroxscaffold_2G00128210 Rroxscaffold_3G00229540 Rroxscaffold_5G00350470
rosa_rugosa	Rorug02G0565800 Rorug05G0443300
rosa_samantha	Rh2AG646000 Rh2BG656700 Rh2CG621800 Rh2DG670100 Rh5AG500200 Rh5BG521300 Rh5CG545400 Rh5DG534100
rosa_wichuraiana	Rw2G053050 Rw5G046430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1844
AatII	GACGTC	1 cut(s)	8
Acc36I	ACCTGC	1 cut(s)	600
AccB1I	GGYRCC	1 cut(s)	267
AccI	GTMKAC	2 cut(s)	984, 1571
AccII	CGCG	6 cut(s)	127, 227, 309, 390, 402, 565
AclWI	GGATC	2 cut(s)	185, 1407
AcoI	YGGCCR	2 cut(s)	46, 1257
AcsI	RAATTY	3 cut(s)	484, 840, 1148
AcuI	CTGAAG	1 cut(s)	662
AcyI	GRCGYC	4 cut(s)	5, 240, 268, 1674
AfaI	GTAC	5 cut(s)	188, 399, 614, 1246, 1565
AfeI	AGCGCT	1 cut(s)	1641
AflIII	ACRYGT	2 cut(s)	169, 1566
AgsI	TTSAA	7 cut(s)	583, 817, 1079, 1324, 1337, 1428, 1514
AhlI	ACTAGT	3 cut(s)	620, 962, 1238
AjnI	CCWGG	3 cut(s)	195, 532, 1744
AjuI	GAANNNNNNNTTGG	6 cut(s)	270, 302, 749, 781, 1725, 1757
AluBI	AGCT	6 cut(s)	215, 250, 313, 497, 1889, 1893
AluI	AGCT	6 cut(s)	215, 250, 313, 497, 1889, 1893
Alw21I	GWGCWC	1 cut(s)	315
Alw26I	GTCTC	3 cut(s)	132, 875, 1297
AlwI	GGATC	2 cut(s)	185, 1407
AlwNI	CAGNNNCTG	1 cut(s)	1310
Ama87I	CYCGRG	2 cut(s)	135, 1384
Aor51HI	AGCGCT	1 cut(s)	1641
AoxI	GGCC	6 cut(s)	46, 192, 198, 282, 358, 1257
ApeKI	GCWGC	8 cut(s)	154, 1310, 1417, 1490, 1493, 1637, 1642, 1724
ApoI	RAATTY	3 cut(s)	484, 840, 1148
AspLEI	GCGC	8 cut(s)	129, 229, 270, 382, 392, 404, 567, 1642
AspS9I	GGNCC	3 cut(s)	193, 199, 282
AsuC2I	CCSGG	2 cut(s)	1634, 1768
AsuHPI	GGTGA	5 cut(s)	124, 434, 1099, 1366, 1756
AsuII	TTCGAA	1 cut(s)	366
AsuNHI	GCTAGC	1 cut(s)	1889
AvaI	CYCGRG	2 cut(s)	135, 1384
BaeGI	GKGCMC	1 cut(s)	1453
BanI	GGYRCC	1 cut(s)	267
BanII	GRGCYC	1 cut(s)	315
BarI	GAAGNNNNNNTAC	4 cut(s)	958, 990, 1219, 1251
BbsI	GAAGAC	2 cut(s)	650, 1179
Bbv12I	GWGCWC	1 cut(s)	315
BbvI	GCAGC	8 cut(s)	141, 1297, 1404, 1477, 1480, 1629, 1649, 1711
BccI	CCATC	4 cut(s)	694, 820, 1704, 1810
BceAI	ACGGC	2 cut(s)	253, 1580
BcgI	CGANNNNNNTGC	2 cut(s)	508, 542
BciT130I	CCWGG	3 cut(s)	197, 534, 1746
BclI	TGATCA	3 cut(s)	666, 1018, 1462
BcnI	CCSGG	2 cut(s)	1634, 1768
BcoDI	GTCTC	3 cut(s)	132, 875, 1297
BcuI	ACTAGT	3 cut(s)	620, 962, 1238
BfaI	CTAG	7 cut(s)	212, 254, 621, 963, 1239, 1670, 1890
BfmI	CTRYAG	1 cut(s)	1114
BfoI	RGCGCY	2 cut(s)	271, 1643
BfuAI	ACCTGC	1 cut(s)	600
BlpI	GCTNAGC	1 cut(s)	1772
BmcAI	AGTACT	1 cut(s)	1246
Bme1390I	CCNGG	5 cut(s)	197, 534, 1634, 1746, 1768
BmeT110I	CYCGRG	2 cut(s)	135, 1384
BmgT120I	GGNCC	3 cut(s)	193, 199, 282
BmiI	GGNNCC	1 cut(s)	269
BmrFI	CCNGG	5 cut(s)	197, 534, 1634, 1746, 1768
BmrI	ACTGGG	1 cut(s)	1658
BmsI	GCATC	4 cut(s)	70, 618, 1404, 1508
BmtI	GCTAGC	1 cut(s)	1893
BmuI	ACTGGG	1 cut(s)	1658
BpiI	GAAGAC	2 cut(s)	650, 1179
BpmI	CTGGAG	1 cut(s)	963
Bpu10I	CCTNAGC	2 cut(s)	1167, 1497
Bpu1102I	GCTNAGC	1 cut(s)	1772
Bpu14I	TTCGAA	1 cut(s)	366
BpuMI	CCSGG	2 cut(s)	1634, 1768
Bsa29I	ATCGAT	1 cut(s)	900
BsaAI	YACGTR	1 cut(s)	190
BsaBI	GATNNNNATC	1 cut(s)	834
BsaHI	GRCGYC	4 cut(s)	5, 240, 268, 1674
BsaI	GGTCTC	1 cut(s)	132
BsaJI	CCNNGG	4 cut(s)	43, 195, 568, 1377
BsaXI	ACNNNNNCTCC	4 cut(s)	77, 107, 213, 243
Bse118I	RCCGGY	1 cut(s)	1612
Bse1I	ACTGG	3 cut(s)	269, 980, 1653
Bse3DI	GCAATG	3 cut(s)	375, 1018, 1788
Bse8I	GATNNNNATC	1 cut(s)	834
BseBI	CCWGG	3 cut(s)	197, 534, 1746
BseCI	ATCGAT	1 cut(s)	900
BseDI	CCNNGG	4 cut(s)	43, 195, 568, 1377
BseGI	GGATG	7 cut(s)	705, 831, 835, 1419, 1523, 1574, 1802
BseJI	GATNNNNATC	1 cut(s)	834
BseMI	GCAATG	3 cut(s)	375, 1018, 1788
BseMII	CTCAG	3 cut(s)	578, 921, 938
BseNI	ACTGG	3 cut(s)	269, 980, 1653
BseRI	GAGGAG	3 cut(s)	18, 221, 440
BseSI	GKGCMC	1 cut(s)	1453
BseXI	GCAGC	8 cut(s)	141, 1297, 1404, 1477, 1480, 1629, 1649, 1711
Bsh1236I	CGCG	6 cut(s)	127, 227, 309, 390, 402, 565
Bsh1285I	CGRYCG	1 cut(s)	162
BshFI	GGCC	6 cut(s)	48, 194, 200, 284, 360, 1259
BshNI	GGYRCC	1 cut(s)	267
BshVI	ATCGAT	1 cut(s)	900
BsiEI	CGRYCG	1 cut(s)	162
BsiHKAI	GWGCWC	1 cut(s)	315
BsiHKCI	CYCGRG	2 cut(s)	135, 1384
BsiSI	CCGG	5 cut(s)	207, 1260, 1613, 1634, 1767
BslFI	GGGAC	1 cut(s)	700
BsmAI	GTCTC	3 cut(s)	132, 875, 1297
BsmFI	GGGAC	1 cut(s)	700
BsmI	GAATGC	1 cut(s)	1759
BsnI	GGCC	6 cut(s)	48, 194, 200, 284, 360, 1259
Bso31I	GGTCTC	1 cut(s)	132
BsoBI	CYCGRG	2 cut(s)	135, 1384
Bsp119I	TTCGAA	1 cut(s)	366
Bsp1286I	GDGCHC	2 cut(s)	315, 1453
Bsp1407I	TGTACA	1 cut(s)	1563
Bsp143I	GATC	9 cut(s)	177, 525, 666, 1018, 1029, 1110, 1399, 1430, 1462
Bsp1720I	GCTNAGC	1 cut(s)	1772
BspANI	GGCC	6 cut(s)	48, 194, 200, 284, 360, 1259
BspCNI	CTCAG	3 cut(s)	579, 922, 939
BspDI	ATCGAT	1 cut(s)	900
BspFNI	CGCG	6 cut(s)	127, 227, 309, 390, 402, 565
BspLI	GGNNCC	1 cut(s)	269
BspMI	ACCTGC	1 cut(s)	600
BspOI	GCTAGC	1 cut(s)	1893
BspPI	GGATC	2 cut(s)	185, 1407
BspT104I	TTCGAA	1 cut(s)	366
BspT107I	GGYRCC	1 cut(s)	267
BspTNI	GGTCTC	1 cut(s)	132
BsrDI	GCAATG	3 cut(s)	375, 1018, 1788
BsrFI	RCCGGY	1 cut(s)	1612
BsrGI	TGTACA	1 cut(s)	1563
BsrI	ACTGG	3 cut(s)	269, 980, 1653
BssAI	RCCGGY	1 cut(s)	1612
BssECI	CCNNGG	4 cut(s)	43, 195, 568, 1377
BssMI	GATC	9 cut(s)	177, 525, 666, 1018, 1029, 1110, 1399, 1430, 1462
BssNI	GRCGYC	4 cut(s)	5, 240, 268, 1674
Bst2UI	CCWGG	3 cut(s)	197, 534, 1746
Bst4CI	ACNGT	6 cut(s)	44, 652, 886, 944, 1252, 1345
Bst6I	CTCTTC	1 cut(s)	1831
BstACI	GRCGYC	4 cut(s)	5, 240, 268, 1674
BstAUI	TGTACA	1 cut(s)	1563
BstBAI	YACGTR	1 cut(s)	190
BstBI	TTCGAA	1 cut(s)	366
BstC8I	GCNNGC	5 cut(s)	311, 467, 495, 1851, 1891
BstDEI	CTNAG	6 cut(s)	587, 930, 947, 1167, 1497, 1772
BstDSI	CCRYGG	2 cut(s)	43, 1377
BstF5I	GGATG	7 cut(s)	705, 831, 835, 1419, 1523, 1574, 1802
BstFNI	CGCG	6 cut(s)	127, 227, 309, 390, 402, 565
BstH2I	RGCGCY	2 cut(s)	271, 1643
BstHHI	GCGC	8 cut(s)	129, 229, 270, 382, 392, 404, 567, 1642
BstKTI	GATC	9 cut(s)	180, 528, 669, 1021, 1032, 1113, 1402, 1433, 1465
BstMAI	GTCTC	3 cut(s)	132, 875, 1297
BstMBI	GATC	9 cut(s)	177, 525, 666, 1018, 1029, 1110, 1399, 1430, 1462
BstMCI	CGRYCG	1 cut(s)	162
BstMWI	GCNNNNNNNGC	9 cut(s)	54, 121, 212, 267, 401, 410, 637, 1187, 1265
BstNI	CCWGG	3 cut(s)	197, 534, 1746
BstNSI	RCATGY	1 cut(s)	1570
BstSCI	CCNGG	5 cut(s)	195, 532, 1632, 1744, 1766
BstSFI	CTRYAG	1 cut(s)	1114
BstSLI	GKGCMC	1 cut(s)	1453
BstUI	CGCG	6 cut(s)	127, 227, 309, 390, 402, 565
BstV1I	GCAGC	8 cut(s)	141, 1297, 1404, 1477, 1480, 1629, 1649, 1711
BstV2I	GAAGAC	2 cut(s)	650, 1179
BstXI	CCANNNNNNTGG	1 cut(s)	279
Bsu15I	ATCGAT	1 cut(s)	900
BsuRI	GGCC	6 cut(s)	48, 194, 200, 284, 360, 1259
BsuTUI	ATCGAT	1 cut(s)	900
BtgI	CCRYGG	2 cut(s)	43, 1377
BtsCI	GGATG	7 cut(s)	705, 831, 835, 1419, 1523, 1574, 1802
BtsI	GCAGTG	2 cut(s)	318, 1483
BtsIMutI	CAGTG	4 cut(s)	318, 891, 1350, 1483
BveI	ACCTGC	1 cut(s)	600
Cac8I	GCNNGC	5 cut(s)	311, 467, 495, 1851, 1891
CaiI	CAGNNNCTG	1 cut(s)	1310
CfoI	GCGC	8 cut(s)	129, 229, 270, 382, 392, 404, 567, 1642
Cfr10I	RCCGGY	1 cut(s)	1612
Cfr13I	GGNCC	3 cut(s)	193, 199, 282
ClaI	ATCGAT	1 cut(s)	900
CseI	GACGC	3 cut(s)	229, 1682, 1875
CsiI	ACCWGGT	1 cut(s)	532
Csp6I	GTAC	5 cut(s)	187, 398, 613, 1245, 1564
CviAII	CATG	8 cut(s)	670, 1153, 1285, 1403, 1466, 1567, 1654, 1807
CviQI	GTAC	5 cut(s)	187, 398, 613, 1245, 1564
DdeI	CTNAG	6 cut(s)	587, 930, 947, 1167, 1497, 1772
DinI	GGCGCC	1 cut(s)	269
DpnI	GATC	9 cut(s)	179, 527, 668, 1020, 1031, 1112, 1401, 1432, 1464
DpnII	GATC	9 cut(s)	177, 525, 666, 1018, 1029, 1110, 1399, 1430, 1462
EaeI	YGGCCR	2 cut(s)	46, 1257
Eam1104I	CTCTTC	1 cut(s)	1831
EarI	CTCTTC	1 cut(s)	1831
EciI	GGCGGA	1 cut(s)	929
Ecl136II	GAGCTC	1 cut(s)	313
Eco24I	GRGCYC	1 cut(s)	315
Eco31I	GGTCTC	1 cut(s)	132
Eco47III	AGCGCT	1 cut(s)	1641
Eco53kI	GAGCTC	1 cut(s)	313
Eco57I	CTGAAG	1 cut(s)	662
Eco88I	CYCGRG	2 cut(s)	135, 1384
EcoICRI	GAGCTC	1 cut(s)	313
EcoRII	CCWGG	3 cut(s)	195, 532, 1744
EcoT38I	GRGCYC	1 cut(s)	315
EgeI	GGCGCC	1 cut(s)	269
EheI	GGCGCC	1 cut(s)	269
FaeI	CATG	8 cut(s)	673, 1156, 1288, 1406, 1469, 1570, 1657, 1810
FalI	AAGNNNNNCTT	2 cut(s)	1160, 1192
FaqI	GGGAC	1 cut(s)	700
FatI	CATG	8 cut(s)	669, 1152, 1284, 1402, 1465, 1566, 1653, 1806
FauI	CCCGC	3 cut(s)	126, 437, 474
FbaI	TGATCA	3 cut(s)	666, 1018, 1462
FblI	GTMKAC	2 cut(s)	984, 1571
FokI	GGATG	7 cut(s)	712, 838, 842, 1426, 1530, 1561, 1789
FriOI	GRGCYC	1 cut(s)	315
FspBI	CTAG	7 cut(s)	212, 254, 621, 963, 1239, 1670, 1890
GlaI	GCGC	8 cut(s)	128, 228, 269, 381, 391, 403, 566, 1641
GsuI	CTGGAG	1 cut(s)	963
HaeII	RGCGCY	2 cut(s)	271, 1643
HaeIII	GGCC	6 cut(s)	48, 194, 200, 284, 360, 1259
HapII	CCGG	5 cut(s)	207, 1260, 1613, 1634, 1767
HgaI	GACGC	3 cut(s)	229, 1682, 1875
HhaI	GCGC	8 cut(s)	129, 229, 270, 382, 392, 404, 567, 1642
Hin1I	GRCGYC	4 cut(s)	5, 240, 268, 1674
Hin1II	CATG	8 cut(s)	673, 1156, 1288, 1406, 1469, 1570, 1657, 1810
Hin6I	GCGC	8 cut(s)	127, 227, 268, 380, 390, 402, 565, 1640
HinP1I	GCGC	8 cut(s)	127, 227, 268, 380, 390, 402, 565, 1640
HincII	GTYRAC	3 cut(s)	424, 985, 1686
HindII	GTYRAC	3 cut(s)	424, 985, 1686
HindIII	AAGCTT	2 cut(s)	248, 495
HinfI	GANTC	8 cut(s)	344, 425, 835, 902, 971, 1382, 1542, 1741
HpaII	CCGG	5 cut(s)	207, 1260, 1613, 1634, 1767
HphI	GGTGA	5 cut(s)	124, 434, 1099, 1366, 1756
Hpy166II	GTNNAC	5 cut(s)	424, 940, 985, 1572, 1686
Hpy188I	TCNGA	7 cut(s)	97, 177, 182, 343, 948, 1060, 1541
Hpy188III	TCNNGA	7 cut(s)	244, 254, 845, 1224, 1386, 1428, 1670
Hpy8I	GTNNAC	5 cut(s)	424, 940, 985, 1572, 1686
Hpy99I	CGWCG	3 cut(s)	80, 652, 1438
HpyAV	CCTTC	3 cut(s)	251, 725, 1221
HpyCH4III	ACNGT	6 cut(s)	44, 652, 886, 944, 1252, 1345
HpyCH4IV	ACGT	3 cut(s)	5, 171, 189
HpyCH4V	TGCA	5 cut(s)	40, 1268, 1603, 1645, 1853
HpyF10VI	GCNNNNNNNGC	9 cut(s)	54, 121, 212, 267, 401, 410, 637, 1187, 1265
HpyF3I	CTNAG	6 cut(s)	587, 930, 947, 1167, 1497, 1772
HpySE526I	ACGT	3 cut(s)	5, 171, 189
Hsp92I	GRCGYC	4 cut(s)	5, 240, 268, 1674
Hsp92II	CATG	8 cut(s)	673, 1156, 1288, 1406, 1469, 1570, 1657, 1810
HspAI	GCGC	8 cut(s)	127, 227, 268, 380, 390, 402, 565, 1640
KasI	GGCGCC	1 cut(s)	267
Ksp22I	TGATCA	3 cut(s)	666, 1018, 1462
Kzo9I	GATC	9 cut(s)	177, 525, 666, 1018, 1029, 1110, 1399, 1430, 1462
LmnI	GCTCC	4 cut(s)	234, 318, 387, 781
Lsp1109I	GCAGC	8 cut(s)	141, 1297, 1404, 1477, 1480, 1629, 1649, 1711
LweI	GCATC	4 cut(s)	70, 618, 1404, 1508
MabI	ACCWGGT	1 cut(s)	532
MaeI	CTAG	7 cut(s)	212, 254, 621, 963, 1239, 1670, 1890
MaeII	ACGT	3 cut(s)	5, 171, 189
MaeIII	GTNAC	9 cut(s)	6, 241, 509, 538, 596, 925, 1203, 1230, 1501
MalI	GATC	9 cut(s)	179, 527, 668, 1020, 1031, 1112, 1401, 1432, 1464
MboI	GATC	9 cut(s)	177, 525, 666, 1018, 1029, 1110, 1399, 1430, 1462
MboII	GAAGA	7 cut(s)	655, 829, 966, 1184, 1342, 1818, 1821
MfeI	CAATTG	1 cut(s)	776
MhlI	GDGCHC	2 cut(s)	315, 1453
Mly113I	GGCGCC	1 cut(s)	268
MlyI	GAGTC	3 cut(s)	338, 419, 1376
MseI	TTAA	4 cut(s)	1857, 1874, 1895, 1901
MslI	CAYNNNNRTG	2 cut(s)	674, 1157
MspA1I	CMGCKG	1 cut(s)	395
MspI	CCGG	5 cut(s)	207, 1260, 1613, 1634, 1767
MspR9I	CCNGG	5 cut(s)	197, 534, 1634, 1746, 1768
MunI	CAATTG	1 cut(s)	776
Mva1269I	GAATGC	1 cut(s)	1759
MvaI	CCWGG	3 cut(s)	197, 534, 1746
MvnI	CGCG	6 cut(s)	127, 227, 309, 390, 402, 565
MwoI	GCNNNNNNNGC	9 cut(s)	54, 121, 212, 267, 401, 410, 637, 1187, 1265
NarI	GGCGCC	1 cut(s)	268
NciI	CCSGG	2 cut(s)	1634, 1768
NdeII	GATC	9 cut(s)	177, 525, 666, 1018, 1029, 1110, 1399, 1430, 1462
NheI	GCTAGC	1 cut(s)	1889
NlaIII	CATG	8 cut(s)	673, 1156, 1288, 1406, 1469, 1570, 1657, 1810
NlaIV	GGNNCC	1 cut(s)	269
NmeAIII	GCCGAG	1 cut(s)	593
NmuCI	GTSAC	5 cut(s)	6, 241, 538, 925, 1501
NspI	RCATGY	1 cut(s)	1570
NspV	TTCGAA	1 cut(s)	366
PciI	ACATGT	1 cut(s)	1566
PcsI	WCGNNNNNNNCGW	2 cut(s)	186, 653
PctI	GAATGC	1 cut(s)	1759
PfeI	GAWTC	5 cut(s)	835, 902, 971, 1542, 1741
PflFI	GACNNNGTC	1 cut(s)	74
PfoI	TCCNGGA	1 cut(s)	1744
PleI	GAGTC	3 cut(s)	338, 419, 1376
PluTI	GGCGCC	1 cut(s)	271
PpsI	GAGTC	3 cut(s)	338, 419, 1376
Ppu21I	YACGTR	1 cut(s)	190
PscI	ACATGT	1 cut(s)	1566
PsiI	TTATAA	1 cut(s)	1844
Psp124BI	GAGCTC	1 cut(s)	315
Psp6I	CCWGG	3 cut(s)	195, 532, 1744
PspGI	CCWGG	3 cut(s)	195, 532, 1744
PspN4I	GGNNCC	1 cut(s)	269
PspPI	GGNCC	3 cut(s)	193, 199, 282
PstNI	CAGNNNCTG	1 cut(s)	1310
PsyI	GACNNNGTC	1 cut(s)	74
RsaI	GTAC	5 cut(s)	188, 399, 614, 1246, 1565
RsaNI	GTAC	5 cut(s)	187, 398, 613, 1245, 1564
RseI	CAYNNNNRTG	2 cut(s)	674, 1157
SacI	GAGCTC	1 cut(s)	315
SalI	GTCGAC	1 cut(s)	983
SaqAI	TTAA	4 cut(s)	1857, 1874, 1895, 1901
Sau3AI	GATC	9 cut(s)	177, 525, 666, 1018, 1029, 1110, 1399, 1430, 1462
Sau96I	GGNCC	3 cut(s)	193, 199, 282
ScaI	AGTACT	1 cut(s)	1246
SchI	GAGTC	3 cut(s)	338, 419, 1376
ScrFI	CCNGG	5 cut(s)	197, 534, 1634, 1746, 1768
SduI	GDGCHC	2 cut(s)	315, 1453
SexAI	ACCWGGT	1 cut(s)	532
SfaNI	GCATC	4 cut(s)	70, 618, 1404, 1508
SfcI	CTRYAG	1 cut(s)	1114
SfoI	GGCGCC	1 cut(s)	269
SfuI	TTCGAA	1 cut(s)	366
SmiMI	CAYNNNNRTG	2 cut(s)	674, 1157
SpeI	ACTAGT	3 cut(s)	620, 962, 1238
SspDI	GGCGCC	1 cut(s)	267
SspI	AATATT	1 cut(s)	1273
SspMI	CTAG	7 cut(s)	212, 254, 621, 963, 1239, 1670, 1890
SstI	GAGCTC	1 cut(s)	315
StyD4I	CCNGG	5 cut(s)	195, 532, 1632, 1744, 1766
TaaI	ACNGT	6 cut(s)	44, 652, 886, 944, 1252, 1345
TaiI	ACGT	3 cut(s)	8, 174, 192
TaqII	GACCGA	1 cut(s)	176
TatI	WGTACW	2 cut(s)	1244, 1563
TauI	GCSGC	8 cut(s)	51, 54, 57, 124, 127, 154, 395, 914
TfiI	GAWTC	5 cut(s)	835, 902, 971, 1542, 1741
Tru1I	TTAA	4 cut(s)	1857, 1874, 1895, 1901
Tru9I	TTAA	4 cut(s)	1857, 1874, 1895, 1901
TscAI	CASTG	4 cut(s)	325, 891, 1350, 1483
TseFI	GTSAC	5 cut(s)	6, 241, 538, 925, 1501
TseI	GCWGC	8 cut(s)	154, 1310, 1417, 1490, 1493, 1637, 1642, 1724
Tsp45I	GTSAC	5 cut(s)	6, 241, 538, 925, 1501
TspDTI	ATGAA	7 cut(s)	752, 770, 1058, 1127, 1141, 1273, 1318
TspGWI	ACGGA	1 cut(s)	1394
TspRI	CASTG	4 cut(s)	325, 891, 1350, 1483
Tth111I	GACNNNGTC	1 cut(s)	74
XapI	RAATTY	3 cut(s)	484, 840, 1148
XbaI	TCTAGA	2 cut(s)	253, 1669
XceI	RCATGY	1 cut(s)	1570
XmiI	GTMKAC	2 cut(s)	984, 1571
XspI	CTAG	7 cut(s)	212, 254, 621, 963, 1239, 1670, 1890
ZraI	GACGTC	1 cut(s)	6
ZrmI	AGTACT	1 cut(s)	1246

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.