Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_co8453001.1

Orthogroup ID

OG0004461

Physical Location & Seq

Genomic Coordinates Reverse (-)

2 .. 1702

Gene Structure 1701 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_co8453001.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

atgtcgttagttccatattccgacccgaattcggagccggactcatccaaccctgcatggcaggacatgttccgatcagcttcaaaccggaaatctactccggaccctcacgcgcctcacgcgccgccgtcgccggctccggacccgccgaaaccggccggcccagatcacaaaactggcccgaccggcgattcccaggtacggctagccctgtacataaccatggcgcatgctggtctggccttcaccatttttatattctatgctgtgggtaagcttttagaggagtacttgaggcctattcagtgggctgtgttgtgttcaattcctttgagaggtatacagcaagcccttgtggggttttggtctgagccattgaggcttgggctgactgagactgttttggctgttcctgttgcgattttcggggtttttgtgggtacccttgtggaggttagggagatttgtttgagggtgttcctccggaagccgaaattggagcaccggaggaagcaccagagtgagttttctaagctgttgaggtggttggtgtcgttttggatacttatacttgcttatgagaggattggtggtgttgggtctttggggattgttggattaggctttgtttttaatgctaagtgtgtcgattcgacaatgcggactgtgtcctctttgaggtgcagtagctttcggcgcagccccattagtgcttatttcactaggagggtgttgattaggttgaagaccattgtggcaattgggttgatttttgctatgattgtggggttcttggttggtgtcacgtttttttcgtataagattggagttgagagtaaggacgcggtgatttcgttgaagttgcatgtggaagagagtaattataccgagaggatgggtattaagcagtggatggatgagaatgatgttcctggaatgatggataggtacagttccaagttgtatgagacagtgtctgagcagctagatagtttggcaatgcagtataatatgacagaatttgcgaccgggattaagcattttgcactaaaacagtctgttaattcttccgagccttcaaatgctttagctaccccatcaccatacacagaaaagcttgtgagtttgaggaatcggatcagtaaaagggaatggggaaatatttacacagaggttcatgcaattgtcaatgaattagtaatcaccagggaggatttggttgagaaggcaaaagggtttgccatgcgaggaatggatgtgtcacagcgcgtgcttgccagtagtaaatcagttgttggaggcagtgcaaaaattatgttttctattgggagttctattgtgtccggagcagctgaggtcttcaatttcgtgtctcagttgatggtattcttctgggtattgtattatctgatcacatccgagtctgggggagtgactgaacaagcaatgagtatgcttccaatttcaaagtctgcaagggttaggtgcgttgaagttcttgataatgccatatccggtgttcttttggcaacagctgagattgccatttttcaaggatgtcttacatggcttttattcagactatttaagatacacttcttgtacatgtccactgttcttgccatcttcagctccgtgctgccaatattcccatcttggtttgcaactattccagcagctcttcaactgctgttggaaggt

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AI-2E_transport

Protein Analysis

567

Amino Acids

63.0

Weight (kDa)

9.1

Isoelectric Point (pI)

43.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004461)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55960
fragaria_vesca	FvH4_3g42400 FvH4_6g51530
malus_domestica	MD11G1036300.v1.1 MD17G1026100.v1.1
prunus_persica	Prupe.3G292600_v2.0.a1 Prupe.6G027100_v2.0.a1
pyrus_communis	pycom17g02120
rosa_chinensis	RchiOBHm_Chr5g0075891
rosa_laevigata	RLG00000022165 RLG00000036599
rosa_multiflora	Rmu_co8453001.1_g000001 Rmu_co8486383.1_g000001 Rmu_sc0002652.1_g000019
rosa_roxburghii	Rroxscaffold_1G00005790 Rroxscaffold_2G00079170 Rroxscaffold_2G00128200 Rroxscaffold_2G00128210 Rroxscaffold_3G00229540 Rroxscaffold_5G00350470
rosa_rugosa	Rorug02G0565800 Rorug05G0443300
rosa_samantha	Rh2AG646000 Rh2BG656700 Rh2CG621800 Rh2DG670100 Rh5AG500200 Rh5BG521300 Rh5CG545400 Rh5DG534100
rosa_wichuraiana	Rw2G053050 Rw5G046430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	440
AccB1I	GGYRCC	1 cut(s)	440
AccI	GTMKAC	1 cut(s)	340
AccII	CGCG	4 cut(s)	113, 122, 845, 1269
AccIII	TCCGGA	4 cut(s)	100, 139, 483, 1343
AciI	CCGC	4 cut(s)	125, 146, 661, 845
AclWI	GGATC	1 cut(s)	1145
AcoI	YGGCCR	1 cut(s)	156
AcsI	RAATTY	2 cut(s)	28, 1019
AcuI	CTGAAG	1 cut(s)	1612
AfaI	GTAC	6 cut(s)	201, 215, 290, 442, 950, 1604
AfiI	CCNNNNNNNGG	7 cut(s)	31, 201, 335, 357, 451, 678, 1425
AflIII	ACRYGT	2 cut(s)	66, 1605
AjnI	CCWGG	3 cut(s)	195, 931, 1205
AjuI	GAANNNNNNNTTGG	2 cut(s)	479, 511
AleI	CACNNNNGTG	1 cut(s)	519
Alw21I	GWGCWC	1 cut(s)	504
Alw26I	GTCTC	3 cut(s)	389, 962, 1377
AlwI	GGATC	1 cut(s)	1145
AlwNI	CAGNNNCTG	1 cut(s)	977
Aor13HI	TCCGGA	4 cut(s)	100, 139, 483, 1343
AoxI	GGCC	5 cut(s)	156, 160, 178, 240, 296
ApeKI	GCWGC	5 cut(s)	699, 982, 1349, 1639, 1676
ApoI	RAATTY	2 cut(s)	28, 1019
Asp718I	GGTACC	1 cut(s)	440
AspLEI	GCGC	5 cut(s)	115, 124, 229, 699, 1269
AspS9I	GGNCC	4 cut(s)	103, 142, 161, 179
AsuC2I	CCSGG	1 cut(s)	1030
AsuHPI	GGTGA	4 cut(s)	238, 859, 1092, 1195
AsuNHI	GCTAGC	1 cut(s)	205
AvaII	GGWCC	2 cut(s)	103, 142
BaeI	ACNNNNGTAYC	2 cut(s)	432, 465
BanI	GGYRCC	1 cut(s)	440
BbsI	GAAGAC	2 cut(s)	752, 1351
Bbv12I	GWGCWC	1 cut(s)	504
BbvCI	CCTCAGC	1 cut(s)	1353
BbvI	GCAGC	5 cut(s)	711, 994, 1361, 1626, 1688
BccI	CCATC	7 cut(s)	889, 907, 934, 1105, 1375, 1631, 1660
BceAI	ACGGC	2 cut(s)	112, 218
BciT130I	CCWGG	3 cut(s)	197, 933, 1207
BciVI	GTATCC	1 cut(s)	555
BclI	TGATCA	1 cut(s)	1410
BcnI	CCSGG	1 cut(s)	1030
BcoDI	GTCTC	3 cut(s)	389, 962, 1377
BfaI	CTAG	3 cut(s)	206, 723, 986
BfuI	GTATCC	1 cut(s)	555
BglI	GCCNNNNNGGC	2 cut(s)	186, 379
BisI	GCNGC	6 cut(s)	125, 700, 983, 1350, 1640, 1677
BlsI	GCNGC	6 cut(s)	126, 701, 984, 1351, 1641, 1678
BmcAI	AGTACT	1 cut(s)	290
Bme1390I	CCNGG	4 cut(s)	197, 933, 1030, 1207
Bme18I	GGWCC	2 cut(s)	103, 142
BmgT120I	GGNCC	4 cut(s)	103, 142, 161, 179
BmiI	GGNNCC	5 cut(s)	36, 105, 138, 144, 442
BmrFI	CCNGG	4 cut(s)	197, 933, 1030, 1207
BmtI	GCTAGC	1 cut(s)	209
BpiI	GAAGAC	2 cut(s)	752, 1351
BplI	GAGNNNNNCTC	2 cut(s)	26, 58
Bpu10I	CCTNAGC	1 cut(s)	1353
BpuEI	CTTGAG	1 cut(s)	313
BpuMI	CCSGG	1 cut(s)	1030
BsaJI	CCNNGG	3 cut(s)	195, 222, 1206
BsaWI	WCCGGW	7 cut(s)	87, 100, 139, 483, 504, 1343, 1514
Bsc4I	CCNNNNNNNGG	7 cut(s)	31, 201, 335, 357, 451, 678, 1425
Bse118I	RCCGGY	4 cut(s)	133, 154, 158, 185
Bse1I	ACTGG	2 cut(s)	181, 1278
Bse3DI	GCAATG	2 cut(s)	1005, 1452
BseAI	TCCGGA	4 cut(s)	100, 139, 483, 1343
BseBI	CCWGG	3 cut(s)	197, 933, 1207
BseDI	CCNNGG	3 cut(s)	195, 222, 1206
BseGI	GGATG	7 cut(s)	44, 900, 918, 922, 1261, 1415, 1562
BseLI	CCNNNNNNNGG	7 cut(s)	31, 201, 335, 357, 451, 678, 1425
BseMI	GCAATG	2 cut(s)	1005, 1452
BseMII	CTCAG	6 cut(s)	360, 384, 969, 1344, 1388, 1527
BseNI	ACTGG	2 cut(s)	181, 1278
BseRI	GAGGAG	1 cut(s)	299
BseX3I	CGGCCG	1 cut(s)	156
BseXI	GCAGC	5 cut(s)	711, 994, 1361, 1626, 1688
BsgI	GTGCAG	1 cut(s)	703
Bsh1236I	CGCG	4 cut(s)	113, 122, 845, 1269
Bsh1285I	CGRYCG	3 cut(s)	159, 186, 1029
BshFI	GGCC	5 cut(s)	158, 162, 180, 242, 298
BshNI	GGYRCC	1 cut(s)	440
BsiEI	CGRYCG	3 cut(s)	159, 186, 1029
BsiHKAI	GWGCWC	1 cut(s)	504
BslI	CCNNNNNNNGG	7 cut(s)	31, 201, 335, 357, 451, 678, 1425
BsmAI	GTCTC	3 cut(s)	389, 962, 1377
BsnI	GGCC	5 cut(s)	158, 162, 180, 242, 298
Bsp1286I	GDGCHC	1 cut(s)	504
Bsp13I	TCCGGA	4 cut(s)	100, 139, 483, 1343
Bsp1407I	TGTACA	2 cut(s)	213, 1602
Bsp143I	GATC	4 cut(s)	74, 166, 1137, 1410
Bsp19I	CCATGG	1 cut(s)	222
BspACI	CCGC	4 cut(s)	125, 146, 661, 845
BspANI	GGCC	5 cut(s)	158, 162, 180, 242, 298
BspCNI	CTCAG	6 cut(s)	361, 385, 970, 1345, 1387, 1528
BspEI	TCCGGA	4 cut(s)	100, 139, 483, 1343
BspFNI	CGCG	4 cut(s)	113, 122, 845, 1269
BspLI	GGNNCC	5 cut(s)	36, 105, 138, 144, 442
BspOI	GCTAGC	1 cut(s)	209
BspPI	GGATC	1 cut(s)	1145
BspQI	GCTCTTC	1 cut(s)	1686
BspT107I	GGYRCC	1 cut(s)	440
BsrDI	GCAATG	2 cut(s)	1005, 1452
BsrFI	RCCGGY	4 cut(s)	133, 154, 158, 185
BsrGI	TGTACA	2 cut(s)	213, 1602
BsrI	ACTGG	2 cut(s)	181, 1278
BssAI	RCCGGY	4 cut(s)	133, 154, 158, 185
BssECI	CCNNGG	3 cut(s)	195, 222, 1206
BssMI	GATC	4 cut(s)	74, 166, 1137, 1410
BssNAI	GTATAC	1 cut(s)	341
BssT1I	CCWWGG	1 cut(s)	222
Bst1107I	GTATAC	1 cut(s)	341
Bst2UI	CCWGG	3 cut(s)	197, 933, 1207
Bst4CI	ACNGT	6 cut(s)	400, 667, 953, 973, 1056, 1615
Bst6I	CTCTTC	2 cut(s)	867, 1686
BstAUI	TGTACA	2 cut(s)	213, 1602
BstC8I	GCNNGC	7 cut(s)	135, 160, 207, 231, 348, 1271, 1275
BstDEI	CTNAG	8 cut(s)	369, 393, 531, 639, 978, 1353, 1374, 1536
BstDSI	CCRYGG	1 cut(s)	222
BstENI	CCTNNNNNAGG	3 cut(s)	333, 449, 676
BstF5I	GGATG	7 cut(s)	44, 900, 918, 922, 1261, 1415, 1562
BstFNI	CGCG	4 cut(s)	113, 122, 845, 1269
BstHHI	GCGC	5 cut(s)	115, 124, 229, 699, 1269
BstKTI	GATC	4 cut(s)	77, 169, 1140, 1413
BstMAI	GTCTC	3 cut(s)	389, 962, 1377
BstMBI	GATC	4 cut(s)	74, 166, 1137, 1410
BstMCI	CGRYCG	3 cut(s)	159, 186, 1029
BstMWI	GCNNNNNNNGC	8 cut(s)	119, 121, 130, 186, 239, 379, 696, 1541
BstNI	CCWGG	3 cut(s)	197, 933, 1207
BstNSI	RCATGY	4 cut(s)	70, 233, 869, 1609
BstSCI	CCNGG	4 cut(s)	195, 931, 1028, 1205
BstUI	CGCG	4 cut(s)	113, 122, 845, 1269
BstV1I	GCAGC	5 cut(s)	711, 994, 1361, 1626, 1688
BstV2I	GAAGAC	2 cut(s)	752, 1351
BstZ17I	GTATAC	1 cut(s)	341
BstZI	CGGCCG	1 cut(s)	156
BsuI	GTATCC	1 cut(s)	555
BsuRI	GGCC	5 cut(s)	158, 162, 180, 242, 298
BtgI	CCRYGG	1 cut(s)	222
BtsCI	GGATG	7 cut(s)	44, 900, 918, 922, 1261, 1415, 1562
BtsI	GCAGTG	2 cut(s)	914, 1309
BtsIMutI	CAGTG	5 cut(s)	311, 914, 978, 1309, 1611
Cac8I	GCNNGC	7 cut(s)	135, 160, 207, 231, 348, 1271, 1275
CaiI	CAGNNNCTG	1 cut(s)	977
CfoI	GCGC	5 cut(s)	115, 124, 229, 699, 1269
Cfr10I	RCCGGY	4 cut(s)	133, 154, 158, 185
Cfr13I	GGNCC	4 cut(s)	103, 142, 161, 179
CseI	GACGC	1 cut(s)	851
Csp6I	GTAC	6 cut(s)	200, 214, 289, 441, 949, 1603
CspCI	CAANNNNNGTGG	2 cut(s)	1600, 1635
CviAII	CATG	9 cut(s)	57, 67, 223, 230, 866, 1178, 1243, 1566, 1606
CviQI	GTAC	6 cut(s)	200, 214, 289, 441, 949, 1603
DdeI	CTNAG	8 cut(s)	369, 393, 531, 639, 978, 1353, 1374, 1536
DpnI	GATC	4 cut(s)	76, 168, 1139, 1412
DpnII	GATC	4 cut(s)	74, 166, 1137, 1410
EaeI	YGGCCR	1 cut(s)	156
EagI	CGGCCG	1 cut(s)	156
Eam1104I	CTCTTC	2 cut(s)	867, 1686
EarI	CTCTTC	2 cut(s)	867, 1686
EclXI	CGGCCG	1 cut(s)	156
Eco130I	CCWWGG	1 cut(s)	222
Eco147I	AGGCCT	1 cut(s)	298
Eco47I	GGWCC	2 cut(s)	103, 142
Eco52I	CGGCCG	1 cut(s)	156
Eco57I	CTGAAG	1 cut(s)	1612
EcoNI	CCTNNNNNAGG	3 cut(s)	333, 449, 676
EcoRI	GAATTC	1 cut(s)	28
EcoRII	CCWGG	3 cut(s)	195, 931, 1205
EcoT14I	CCWWGG	1 cut(s)	222
ErhI	CCWWGG	1 cut(s)	222
FaeI	CATG	9 cut(s)	60, 70, 226, 233, 869, 1181, 1246, 1569, 1609
FalI	AAGNNNNNCTT	4 cut(s)	1545, 1577, 1580, 1612
FatI	CATG	9 cut(s)	56, 66, 222, 229, 865, 1177, 1242, 1565, 1605
FauI	CCCGC	1 cut(s)	153
FbaI	TGATCA	1 cut(s)	1410
FblI	GTMKAC	1 cut(s)	340
Fnu4HI	GCNGC	6 cut(s)	125, 700, 983, 1350, 1640, 1677
FokI	GGATG	7 cut(s)	31, 907, 925, 929, 1268, 1402, 1569
FseI	GGCCGGCC	1 cut(s)	162
Fsp4HI	GCNGC	6 cut(s)	125, 700, 983, 1350, 1640, 1677
FspBI	CTAG	3 cut(s)	206, 723, 986
GlaI	GCGC	5 cut(s)	114, 123, 228, 698, 1268
GluI	GCNGC	6 cut(s)	125, 700, 983, 1350, 1640, 1677
HaeIII	GGCC	5 cut(s)	158, 162, 180, 242, 298
HgaI	GACGC	1 cut(s)	851
HhaI	GCGC	5 cut(s)	115, 124, 229, 699, 1269
Hin1II	CATG	9 cut(s)	60, 70, 226, 233, 869, 1181, 1246, 1569, 1609
Hin6I	GCGC	5 cut(s)	113, 122, 227, 697, 1267
HinP1I	GCGC	5 cut(s)	113, 122, 227, 697, 1267
HindIII	AAGCTT	2 cut(s)	275, 1115
HinfI	GANTC	5 cut(s)	41, 191, 650, 1132, 1421
HphI	GGTGA	4 cut(s)	238, 859, 1092, 1195
Hpy166II	GTNNAC	2 cut(s)	341, 1611
Hpy188III	TCNNGA	5 cut(s)	101, 140, 484, 1344, 1499
Hpy8I	GTNNAC	2 cut(s)	341, 1611
Hpy99I	CGWCG	1 cut(s)	133
HpyAV	CCTTC	4 cut(s)	253, 1086, 1219, 1691
HpyCH4III	ACNGT	6 cut(s)	400, 667, 953, 973, 1056, 1615
HpyCH4IV	ACGT	1 cut(s)	806
HpyCH4V	TGCA	9 cut(s)	56, 684, 865, 1003, 1046, 1181, 1307, 1475, 1664
HpyF10VI	GCNNNNNNNGC	8 cut(s)	119, 121, 130, 186, 239, 379, 696, 1541
HpyF3I	CTNAG	8 cut(s)	369, 393, 531, 639, 978, 1353, 1374, 1536
HpySE526I	ACGT	1 cut(s)	806
Hsp92II	CATG	9 cut(s)	60, 70, 226, 233, 869, 1181, 1246, 1569, 1609
HspAI	GCGC	5 cut(s)	113, 122, 227, 697, 1267
Kpn2I	TCCGGA	4 cut(s)	100, 139, 483, 1343
KpnI	GGTACC	1 cut(s)	444
KroI	GCCGGC	2 cut(s)	133, 158
KroNI	GCCGGC	2 cut(s)	135, 160
Ksp22I	TGATCA	1 cut(s)	1410
Kzo9I	GATC	4 cut(s)	74, 166, 1137, 1410
LguI	GCTCTTC	1 cut(s)	1686
LmnI	GCTCC	5 cut(s)	34, 142, 499, 1346, 1637
Lsp1109I	GCAGC	5 cut(s)	711, 994, 1361, 1626, 1688
MaeI	CTAG	3 cut(s)	206, 723, 986
MaeII	ACGT	1 cut(s)	806
MaeIII	GTNAC	3 cut(s)	802, 1260, 1432
MalI	GATC	4 cut(s)	76, 168, 1139, 1412
MboI	GATC	4 cut(s)	74, 166, 1137, 1410
MboII	GAAGA	7 cut(s)	757, 884, 1059, 1351, 1381, 1618, 1673
MfeI	CAATTG	2 cut(s)	759, 1182
MhlI	GDGCHC	1 cut(s)	504
MlyI	GAGTC	2 cut(s)	35, 1430
MmeI	TCCRAC	5 cut(s)	45, 72, 595, 1276, 1674
MroI	TCCGGA	4 cut(s)	100, 139, 483, 1343
MroNI	GCCGGC	2 cut(s)	133, 158
MseI	TTAA	5 cut(s)	633, 903, 1035, 1062, 1587
MslI	CAYNNNNRTG	2 cut(s)	221, 519
MspA1I	CMGCKG	2 cut(s)	1352, 1535
MspR9I	CCNGG	4 cut(s)	197, 933, 1030, 1207
MunI	CAATTG	2 cut(s)	759, 1182
MvaI	CCWGG	3 cut(s)	197, 933, 1207
MvnI	CGCG	4 cut(s)	113, 122, 845, 1269
MwoI	GCNNNNNNNGC	8 cut(s)	119, 121, 130, 186, 239, 379, 696, 1541
NaeI	GCCGGC	2 cut(s)	135, 160
NciI	CCSGG	1 cut(s)	1030
NcoI	CCATGG	1 cut(s)	222
NdeII	GATC	4 cut(s)	74, 166, 1137, 1410
NgoMIV	GCCGGC	2 cut(s)	133, 158
NheI	GCTAGC	1 cut(s)	205
NlaIII	CATG	9 cut(s)	60, 70, 226, 233, 869, 1181, 1246, 1569, 1609
NlaIV	GGNNCC	5 cut(s)	36, 105, 138, 144, 442
NmuCI	GTSAC	3 cut(s)	802, 1260, 1432
NspI	RCATGY	4 cut(s)	70, 233, 869, 1609
OliI	CACNNNNGTG	1 cut(s)	519
PaeI	GCATGC	1 cut(s)	233
PceI	AGGCCT	1 cut(s)	298
PciI	ACATGT	2 cut(s)	66, 1605
PciSI	GCTCTTC	1 cut(s)	1686
PcsI	WCGNNNNNNNCGW	1 cut(s)	812
PdiI	GCCGGC	2 cut(s)	135, 160
PfeI	GAWTC	3 cut(s)	191, 650, 1132
PflFI	GACNNNGTC	2 cut(s)	667, 973
PfoI	TCCNGGA	1 cut(s)	931
PkrI	GCNGC	6 cut(s)	126, 701, 984, 1351, 1641, 1678
PleI	GAGTC	2 cut(s)	35, 1429
PpsI	GAGTC	2 cut(s)	35, 1429
PscI	ACATGT	2 cut(s)	66, 1605
Psp6I	CCWGG	3 cut(s)	195, 931, 1205
PspGI	CCWGG	3 cut(s)	195, 931, 1205
PspN4I	GGNNCC	5 cut(s)	36, 105, 138, 144, 442
PspPI	GGNCC	4 cut(s)	103, 142, 161, 179
PstNI	CAGNNNCTG	1 cut(s)	977
PsyI	GACNNNGTC	2 cut(s)	667, 973
PvuII	CAGCTG	2 cut(s)	1352, 1535
RigI	GGCCGGCC	1 cut(s)	162
RsaI	GTAC	6 cut(s)	201, 215, 290, 442, 950, 1604
RsaNI	GTAC	6 cut(s)	200, 214, 289, 441, 949, 1603
RseI	CAYNNNNRTG	2 cut(s)	221, 519
SapI	GCTCTTC	1 cut(s)	1686
SaqAI	TTAA	5 cut(s)	633, 903, 1035, 1062, 1587
SatI	GCNGC	6 cut(s)	125, 700, 983, 1350, 1640, 1677
Sau3AI	GATC	4 cut(s)	74, 166, 1137, 1410
Sau96I	GGNCC	4 cut(s)	103, 142, 161, 179
ScaI	AGTACT	1 cut(s)	290
SchI	GAGTC	2 cut(s)	35, 1430
ScrFI	CCNGG	4 cut(s)	197, 933, 1030, 1207
SduI	GDGCHC	1 cut(s)	504
SinI	GGWCC	2 cut(s)	103, 142
SmiMI	CAYNNNNRTG	2 cut(s)	221, 519
SmlI	CTYRAG	1 cut(s)	292
SmoI	CTYRAG	1 cut(s)	292
SphI	GCATGC	1 cut(s)	233
SseBI	AGGCCT	1 cut(s)	298
SsiI	CCGC	4 cut(s)	125, 146, 661, 845
SspI	AATATT	2 cut(s)	1162, 1647
SspMI	CTAG	3 cut(s)	206, 723, 986
StuI	AGGCCT	1 cut(s)	298
StyD4I	CCNGG	4 cut(s)	195, 931, 1028, 1205
StyI	CCWWGG	1 cut(s)	222
TaaI	ACNGT	6 cut(s)	400, 667, 953, 973, 1056, 1615
TaiI	ACGT	1 cut(s)	809
TaqI	TCGA	2 cut(s)	648, 653
TatI	WGTACW	3 cut(s)	213, 288, 1602
TauI	GCSGC	1 cut(s)	127
TfiI	GAWTC	3 cut(s)	191, 650, 1132
Tru1I	TTAA	5 cut(s)	633, 903, 1035, 1062, 1587
Tru9I	TTAA	5 cut(s)	633, 903, 1035, 1062, 1587
TscAI	CASTG	5 cut(s)	311, 914, 978, 1309, 1618
TseFI	GTSAC	3 cut(s)	802, 1260, 1432
TseI	GCWGC	5 cut(s)	699, 982, 1349, 1639, 1676
Tsp45I	GTSAC	3 cut(s)	802, 1260, 1432
TspDTI	ATGAA	2 cut(s)	1166, 1206
TspGWI	ACGGA	1 cut(s)	1624
TspRI	CASTG	5 cut(s)	311, 914, 978, 1309, 1618
Tth111I	GACNNNGTC	2 cut(s)	667, 973
VpaK11BI	GGWCC	2 cut(s)	103, 142
XagI	CCTNNNNNAGG	3 cut(s)	333, 449, 676
XapI	RAATTY	2 cut(s)	28, 1019
XceI	RCATGY	4 cut(s)	70, 233, 869, 1609
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1213, 1249
XmiI	GTMKAC	1 cut(s)	340
XspI	CTAG	3 cut(s)	206, 723, 986
ZrmI	AGTACT	1 cut(s)	290

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.