Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0004461

Physical Location & Seq

Genomic Coordinates Forward (+)

89350361 .. 89355317

Gene Structure 4957 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG670100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2004 bp

ATGACGTCATACACCACCGATTTCCCTCCTCCCATTAAACACCGTGGCCGCCGCCGCAAAAGAAAACCCGACCCCGCCGATGCCGACCCTCACTCCGAACCCGAACCCGACCCGCACCCGCCGCCGCGCCTCACCCGAGACCAATCGTTGCGGCTGCCGACCGACCCCCACGTCCGGATCGGAATGTACGTGGCCTTGGCCCACGCCGGACTAGCTTTCTCACTCGCGCTCCTCTACGGCGTCACGAAGCTTCTAGAAGGCTACTGGCGCCCAATCCAATGGGCCATTCTCTGTTCTATGCCTCTCCGCGAGCTCCACACTGCTCTGGTTTCGTTCTGGTCTGACTCTCTCAATCTCGGCCTGTTAGAAACCCTCATTGCGCTCCCACGCGCCGCGGTACGCGCCACCACCGCCTCCCTCGTCGACTCCCGCACTGCCATTCACCGCCTCCTCAAACGCCCCAGCCCGCCTCGCCCGAAAAAGAATTTCAGCTTCTCAAAAATTATACAACGGCTTATCACGTTTGCCCTATTTGTGATTCTATATGAGAACATAGGCTTTTACACTATCCCGGCATTTGCAATTGCTTGCTTTGTAGCTTATGTTTTGGGTTACAGAAGCATAGTGATCGATCCTGGTGTGACTACTACACTTTCGGCACTTTCGCGCCACGGAAGTAGGTTGAAACTGAGGAATAGTAACAGGGTTAGCAGGTACATTACTAGTTTGATGCTCAAAAGGTTGAAGACGACGGTTGCGATTGGCTTGATCATGGTTATGATAGTGGGGACTTTGTTTGGGATGGTTTTCTTTTCGTATAAGATTGGAATGGAAGGGAAGTTTGCTGTGATTTCGATGAAAGTTCATTTGGAACACCAACTGGAGCAGAATTACAACTATGCGGAGAGAGTTGGGTTGAAGAAATGGATGGATGAGAATCAAATTCCGGAGTTGATTGATGATTATGCGACGAAGTTTTATGAGACAGTGTTGCTGAATATCGATTCTTGGGCAGCGGATTACAATGTGACTGAGATTGTGGACAGTCTGAGGCATTATTTGACTAGTAATGATTCTTCTCCAGTCGACATTTCGAGTAATGGTGGTGTTGGCAATGTTGATCATAAGCAGATCAATAGCAATATCAATCAGCCCTTGTCCGAGAAGTTTCATAACATTCAATCGAGGGTGAGGAACAGAGAATGGGGAGTGATCTATAGGGATATTGATGATATTTTTCATTTTAGGAAATTCATGTCTATGATTGCTAAGGAAGACTTGGCAGAGAAAGCGAAAGCATATTTGTTACAGGGATTGGACATTTCGAGAAGGTTACTTACTAGTAGTACTACGGTTTTGGCCGGAGGTGCAAATATTTTGCTGTTCATGGCAGTCTCACTTGTTTCAGGTGCTGCTGGATTGTTCAATTTCATCTTTGAATTGACAGTGTTCTTCTGGCTTTTGTATTACCTAATCACCACGGACTCAGGAGGTGTTATGGATCATGTTTTGGGGATGCTGCCACTTTCAAGATCGACAAGGGTTAGATGTGCCCAAGTGCTTGATCATGCTGTCAGCAGTGTGCTGTTGGCTGCTGCTAAGGTCACATTCTTTCAAGGATGCCTCACATATCTCTTGTTCAGATTCTACCAGATTCATTTCTTGTACATGTCTACATCCCTTGCCCTGATGAGTGCCGTTTTGCAAATTACACCGGCTTGGCTTTTGTCAATCCCGGCAGCGCTGCAACTGGGCATGGAAGCGAAATATCTAGACGCCATTTTGTTGACATCAATCCATCAAATACTGCTGGAATATGGAACTGCTGCTATCCAAGATGAGATTCCAGGACAGAATGCCTACCTCACCGGGCTTAGCATACTTGGTGGCATTGCTCTTTTCCCATCCATGTTAGAAGGAGCAATTATGGGGCCTTTGCTGATGACAGTCATGATTGCCTTCAAAAATCTGTACGTAGAATTCGTTCTTTCTTCCGGACAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AI-2E_transport

Protein Analysis

667

Amino Acids

74.78

Weight (kDa)

9.21

Isoelectric Point (pI)

41.39

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004461)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55960
fragaria_vesca	FvH4_3g42400 FvH4_6g51530
malus_domestica	MD11G1036300.v1.1 MD17G1026100.v1.1
prunus_persica	Prupe.3G292600_v2.0.a1 Prupe.6G027100_v2.0.a1
pyrus_communis	pycom17g02120
rosa_chinensis	RchiOBHm_Chr5g0075891
rosa_laevigata	RLG00000022165 RLG00000036599
rosa_multiflora	Rmu_co8453001.1_g000001 Rmu_co8486383.1_g000001 Rmu_sc0002652.1_g000019
rosa_roxburghii	Rroxscaffold_1G00005790 Rroxscaffold_2G00079170 Rroxscaffold_2G00128200 Rroxscaffold_2G00128210 Rroxscaffold_3G00229540 Rroxscaffold_5G00350470
rosa_rugosa	Rorug02G0565800 Rorug05G0443300
rosa_samantha	Rh2AG646000 Rh2BG656700 Rh2CG621800 Rh2DG670100 Rh5AG500200 Rh5BG521300 Rh5CG545400 Rh5DG534100
rosa_wichuraiana	Rw2G053050 Rw5G046430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	170
AatII	GACGTC	1 cut(s)	8
Acc36I	ACCTGC	1 cut(s)	702
AccB1I	GGYRCC	1 cut(s)	267
AccI	GTMKAC	3 cut(s)	423, 1086, 1673
AccII	CGCG	7 cut(s)	127, 227, 309, 390, 395, 402, 667
AccIII	TCCGGA	3 cut(s)	174, 946, 1994
AclWI	GGATC	3 cut(s)	185, 626, 1509
AcoI	YGGCCR	2 cut(s)	46, 1359
AcsI	RAATTY	4 cut(s)	484, 942, 1250, 1979
AcyI	GRCGYC	4 cut(s)	5, 240, 268, 1776
AfaI	GTAC	6 cut(s)	188, 399, 716, 1348, 1667, 1973
AfeI	AGCGCT	1 cut(s)	1743
AfiI	CCNNNNNNNGG	1 cut(s)	174
AflIII	ACRYGT	1 cut(s)	1668
AgsI	TTSAA	9 cut(s)	685, 745, 919, 1181, 1426, 1439, 1530, 1616, 1963
AhlI	ACTAGT	3 cut(s)	722, 1064, 1340
AjiI	CACGTC	1 cut(s)	172
AjnI	CCWGG	2 cut(s)	634, 1846
AjuI	GAANNNNNNNTTGG	6 cut(s)	270, 302, 851, 883, 1827, 1859
AluBI	AGCT	5 cut(s)	215, 250, 313, 492, 599
AluI	AGCT	5 cut(s)	215, 250, 313, 492, 599
Alw21I	GWGCWC	1 cut(s)	315
Alw26I	GTCTC	3 cut(s)	132, 977, 1399
AlwI	GGATC	3 cut(s)	185, 626, 1509
AlwNI	CAGNNNCTG	1 cut(s)	1412
Ama87I	CYCGRG	1 cut(s)	135
Aor13HI	TCCGGA	3 cut(s)	174, 946, 1994
Aor51HI	AGCGCT	1 cut(s)	1743
AoxI	GGCC	7 cut(s)	46, 192, 198, 282, 358, 1359, 1931
ApeKI	GCWGC	9 cut(s)	154, 1013, 1412, 1519, 1592, 1595, 1739, 1744, 1826
ApoI	RAATTY	4 cut(s)	484, 942, 1250, 1979
Asp700I	GAANNNNTTC	1 cut(s)	1983
AspLEI	GCGC	8 cut(s)	129, 229, 270, 382, 392, 404, 669, 1744
AspS9I	GGNCC	3 cut(s)	199, 282, 1931
AsuC2I	CCSGG	3 cut(s)	572, 1736, 1870
AsuHPI	GGTGA	5 cut(s)	124, 434, 1201, 1468, 1858
AvaI	CYCGRG	1 cut(s)	135
BaeGI	GKGCMC	1 cut(s)	1555
BanI	GGYRCC	1 cut(s)	267
BanII	GRGCYC	1 cut(s)	315
BarI	GAAGNNNNNNTAC	4 cut(s)	1060, 1092, 1321, 1353
BbsI	GAAGAC	2 cut(s)	752, 1281
Bbv12I	GWGCWC	1 cut(s)	315
BbvI	GCAGC	9 cut(s)	141, 1025, 1399, 1506, 1579, 1582, 1731, 1751, 1813
BccI	CCATC	4 cut(s)	796, 922, 1806, 1912
BceAI	ACGGC	3 cut(s)	253, 527, 1682
BcgI	CGANNNNNNTGC	2 cut(s)	610, 644
BciT130I	CCWGG	2 cut(s)	636, 1848
BclI	TGATCA	3 cut(s)	768, 1120, 1564
BcnI	CCSGG	3 cut(s)	572, 1736, 1870
BcoDI	GTCTC	3 cut(s)	132, 977, 1399
BcuI	ACTAGT	3 cut(s)	722, 1064, 1340
BfaI	CTAG	6 cut(s)	212, 254, 723, 1065, 1341, 1772
BfmI	CTRYAG	1 cut(s)	1216
BfoI	RGCGCY	2 cut(s)	271, 1745
BfuAI	ACCTGC	1 cut(s)	702
BlpI	GCTNAGC	1 cut(s)	1874
BmcAI	AGTACT	1 cut(s)	1348
Bme1390I	CCNGG	5 cut(s)	572, 636, 1736, 1848, 1870
BmeT110I	CYCGRG	1 cut(s)	135
BmgBI	CACGTC	1 cut(s)	172
BmgT120I	GGNCC	3 cut(s)	199, 282, 1931
BmiI	GGNNCC	2 cut(s)	269, 1932
BmrFI	CCNGG	5 cut(s)	572, 636, 1736, 1848, 1870
BmrI	ACTGGG	1 cut(s)	1760
BmsI	GCATC	4 cut(s)	70, 720, 1506, 1610
BmuI	ACTGGG	1 cut(s)	1760
BpiI	GAAGAC	2 cut(s)	752, 1281
BpmI	CTGGAG	2 cut(s)	902, 1065
Bpu10I	CCTNAGC	2 cut(s)	1269, 1599
Bpu1102I	GCTNAGC	1 cut(s)	1874
BpuMI	CCSGG	3 cut(s)	572, 1736, 1870
Bsa29I	ATCGAT	2 cut(s)	630, 1002
BsaAI	YACGTR	2 cut(s)	190, 1975
BsaBI	GATNNNNATC	1 cut(s)	936
BsaHI	GRCGYC	4 cut(s)	5, 240, 268, 1776
BsaI	GGTCTC	1 cut(s)	132
BsaJI	CCNNGG	5 cut(s)	43, 195, 393, 670, 1479
BsaWI	WCCGGW	3 cut(s)	174, 946, 1994
BsaXI	ACNNNNNCTCC	4 cut(s)	77, 107, 213, 243
Bsc4I	CCNNNNNNNGG	1 cut(s)	174
Bse118I	RCCGGY	1 cut(s)	1714
Bse1I	ACTGG	4 cut(s)	269, 885, 1082, 1755
Bse3DI	GCAATG	3 cut(s)	375, 1120, 1890
Bse8I	GATNNNNATC	1 cut(s)	936
BseAI	TCCGGA	3 cut(s)	174, 946, 1994
BseBI	CCWGG	2 cut(s)	636, 1848
BseCI	ATCGAT	2 cut(s)	630, 1002
BseDI	CCNNGG	5 cut(s)	43, 195, 393, 670, 1479
BseGI	GGATG	7 cut(s)	807, 933, 937, 1521, 1625, 1676, 1904
BseJI	GATNNNNATC	1 cut(s)	936
BseLI	CCNNNNNNNGG	1 cut(s)	174
BseMI	GCAATG	3 cut(s)	375, 1120, 1890
BseMII	CTCAG	4 cut(s)	680, 1023, 1040, 1500
BseNI	ACTGG	4 cut(s)	269, 885, 1082, 1755
BseRI	GAGGAG	3 cut(s)	18, 221, 440
BseSI	GKGCMC	1 cut(s)	1555
BseXI	GCAGC	9 cut(s)	141, 1025, 1399, 1506, 1579, 1582, 1731, 1751, 1813
BseYI	CCCAGC	1 cut(s)	461
Bsh1236I	CGCG	7 cut(s)	127, 227, 309, 390, 395, 402, 667
Bsh1285I	CGRYCG	1 cut(s)	162
BshFI	GGCC	7 cut(s)	48, 194, 200, 284, 360, 1361, 1933
BshNI	GGYRCC	1 cut(s)	267
BshVI	ATCGAT	2 cut(s)	630, 1002
BsiEI	CGRYCG	1 cut(s)	162
BsiHKAI	GWGCWC	1 cut(s)	315
BsiHKCI	CYCGRG	1 cut(s)	135
BsiSI	CCGG	9 cut(s)	175, 207, 572, 947, 1362, 1715, 1736, 1869, 1995
BslFI	GGGAC	1 cut(s)	802
BslI	CCNNNNNNNGG	1 cut(s)	174
BsmAI	GTCTC	3 cut(s)	132, 977, 1399
BsmFI	GGGAC	1 cut(s)	802
BsmI	GAATGC	1 cut(s)	1861
BsnI	GGCC	7 cut(s)	48, 194, 200, 284, 360, 1361, 1933
Bso31I	GGTCTC	1 cut(s)	132
BsoBI	CYCGRG	1 cut(s)	135
Bsp1286I	GDGCHC	2 cut(s)	315, 1555
Bsp13I	TCCGGA	3 cut(s)	174, 946, 1994
Bsp1407I	TGTACA	1 cut(s)	1665
Bsp1720I	GCTNAGC	1 cut(s)	1874
BspANI	GGCC	7 cut(s)	48, 194, 200, 284, 360, 1361, 1933
BspCNI	CTCAG	4 cut(s)	681, 1024, 1041, 1499
BspDI	ATCGAT	2 cut(s)	630, 1002
BspEI	TCCGGA	3 cut(s)	174, 946, 1994
BspFNI	CGCG	7 cut(s)	127, 227, 309, 390, 395, 402, 667
BspHI	TCATGA	1 cut(s)	1950
BspLI	GGNNCC	2 cut(s)	269, 1932
BspMI	ACCTGC	1 cut(s)	702
BspPI	GGATC	3 cut(s)	185, 626, 1509
BspT107I	GGYRCC	1 cut(s)	267
BspTNI	GGTCTC	1 cut(s)	132
BsrDI	GCAATG	3 cut(s)	375, 1120, 1890
BsrFI	RCCGGY	1 cut(s)	1714
BsrGI	TGTACA	1 cut(s)	1665
BsrI	ACTGG	4 cut(s)	269, 885, 1082, 1755
BssAI	RCCGGY	1 cut(s)	1714
BssECI	CCNNGG	5 cut(s)	43, 195, 393, 670, 1479
BssNI	GRCGYC	4 cut(s)	5, 240, 268, 1776
BssT1I	CCWWGG	1 cut(s)	195
Bst2UI	CCWGG	2 cut(s)	636, 1848
Bst4CI	ACNGT	8 cut(s)	44, 754, 988, 1046, 1354, 1447, 1948, 2001
BstACI	GRCGYC	4 cut(s)	5, 240, 268, 1776
BstAUI	TGTACA	1 cut(s)	1665
BstBAI	YACGTR	2 cut(s)	190, 1975
BstC8I	GCNNGC	3 cut(s)	311, 467, 589
BstDEI	CTNAG	7 cut(s)	689, 1032, 1049, 1269, 1486, 1599, 1874
BstDSI	CCRYGG	4 cut(s)	43, 393, 670, 1479
BstF5I	GGATG	7 cut(s)	807, 933, 937, 1521, 1625, 1676, 1904
BstFNI	CGCG	7 cut(s)	127, 227, 309, 390, 395, 402, 667
BstH2I	RGCGCY	2 cut(s)	271, 1745
BstHHI	GCGC	8 cut(s)	129, 229, 270, 382, 392, 404, 669, 1744
BstMAI	GTCTC	3 cut(s)	132, 977, 1399
BstMCI	CGRYCG	1 cut(s)	162
BstMWI	GCNNNNNNNGC	9 cut(s)	54, 121, 212, 267, 401, 410, 471, 1289, 1367
BstNI	CCWGG	2 cut(s)	636, 1848
BstNSI	RCATGY	1 cut(s)	1672
BstSCI	CCNGG	5 cut(s)	570, 634, 1734, 1846, 1868
BstSFI	CTRYAG	1 cut(s)	1216
BstSLI	GKGCMC	1 cut(s)	1555
BstSNI	TACGTA	1 cut(s)	1975
BstUI	CGCG	7 cut(s)	127, 227, 309, 390, 395, 402, 667
BstV1I	GCAGC	9 cut(s)	141, 1025, 1399, 1506, 1579, 1582, 1731, 1751, 1813
BstV2I	GAAGAC	2 cut(s)	752, 1281
BstXI	CCANNNNNNTGG	1 cut(s)	279
Bsu15I	ATCGAT	2 cut(s)	630, 1002
BsuRI	GGCC	7 cut(s)	48, 194, 200, 284, 360, 1361, 1933
BsuTUI	ATCGAT	2 cut(s)	630, 1002
BtgI	CCRYGG	4 cut(s)	43, 393, 670, 1479
BtrI	CACGTC	1 cut(s)	172
BtsCI	GGATG	7 cut(s)	807, 933, 937, 1521, 1625, 1676, 1904
BtsI	GCAGTG	3 cut(s)	318, 432, 1585
BtsIMutI	CAGTG	5 cut(s)	318, 432, 993, 1452, 1585
BveI	ACCTGC	1 cut(s)	702
Cac8I	GCNNGC	3 cut(s)	311, 467, 589
CaiI	CAGNNNCTG	1 cut(s)	1412
CciI	TCATGA	1 cut(s)	1950
CfoI	GCGC	8 cut(s)	129, 229, 270, 382, 392, 404, 669, 1744
Cfr10I	RCCGGY	1 cut(s)	1714
Cfr13I	GGNCC	3 cut(s)	199, 282, 1931
Cfr42I	CCGCGG	1 cut(s)	396
ClaI	ATCGAT	2 cut(s)	630, 1002
CseI	GACGC	2 cut(s)	229, 1784
Csp6I	GTAC	6 cut(s)	187, 398, 715, 1347, 1666, 1972
CviAII	CATG	9 cut(s)	772, 1255, 1387, 1505, 1568, 1669, 1756, 1909, 1951
CviQI	GTAC	6 cut(s)	187, 398, 715, 1347, 1666, 1972
DdeI	CTNAG	7 cut(s)	689, 1032, 1049, 1269, 1486, 1599, 1874
DinI	GGCGCC	1 cut(s)	269
DrdI	GACNNNNNNGTC	1 cut(s)	170
DseDI	GACNNNNNNGTC	1 cut(s)	170
EaeI	YGGCCR	2 cut(s)	46, 1359
Ecl136II	GAGCTC	1 cut(s)	313
Eco105I	TACGTA	1 cut(s)	1975
Eco130I	CCWWGG	1 cut(s)	195
Eco24I	GRGCYC	1 cut(s)	315
Eco31I	GGTCTC	1 cut(s)	132
Eco47III	AGCGCT	1 cut(s)	1743
Eco53kI	GAGCTC	1 cut(s)	313
Eco88I	CYCGRG	1 cut(s)	135
EcoICRI	GAGCTC	1 cut(s)	313
EcoO109I	RGGNCCY	1 cut(s)	1931
EcoRI	GAATTC	1 cut(s)	1979
EcoRII	CCWGG	2 cut(s)	634, 1846
EcoT14I	CCWWGG	1 cut(s)	195
EcoT38I	GRGCYC	1 cut(s)	315
EgeI	GGCGCC	1 cut(s)	269
EheI	GGCGCC	1 cut(s)	269
ErhI	CCWWGG	1 cut(s)	195
FaeI	CATG	9 cut(s)	775, 1258, 1390, 1508, 1571, 1672, 1759, 1912, 1954
FalI	AAGNNNNNCTT	2 cut(s)	1262, 1294
FaqI	GGGAC	1 cut(s)	802
FatI	CATG	9 cut(s)	771, 1254, 1386, 1504, 1567, 1668, 1755, 1908, 1950
FauI	CCCGC	5 cut(s)	82, 120, 126, 437, 474
FbaI	TGATCA	3 cut(s)	768, 1120, 1564
FblI	GTMKAC	3 cut(s)	423, 1086, 1673
FokI	GGATG	7 cut(s)	814, 940, 944, 1528, 1632, 1663, 1891
FriOI	GRGCYC	1 cut(s)	315
FspBI	CTAG	6 cut(s)	212, 254, 723, 1065, 1341, 1772
GlaI	GCGC	8 cut(s)	128, 228, 269, 381, 391, 403, 668, 1743
GsaI	CCCAGC	1 cut(s)	465
GsuI	CTGGAG	2 cut(s)	902, 1065
HaeII	RGCGCY	2 cut(s)	271, 1745
HaeIII	GGCC	7 cut(s)	48, 194, 200, 284, 360, 1361, 1933
HapII	CCGG	9 cut(s)	175, 207, 572, 947, 1362, 1715, 1736, 1869, 1995
HgaI	GACGC	2 cut(s)	229, 1784
HhaI	GCGC	8 cut(s)	129, 229, 270, 382, 392, 404, 669, 1744
Hin1I	GRCGYC	4 cut(s)	5, 240, 268, 1776
Hin1II	CATG	9 cut(s)	775, 1258, 1390, 1508, 1571, 1672, 1759, 1912, 1954
Hin6I	GCGC	8 cut(s)	127, 227, 268, 380, 390, 402, 667, 1742
HinP1I	GCGC	8 cut(s)	127, 227, 268, 380, 390, 402, 667, 1742
HincII	GTYRAC	3 cut(s)	424, 1087, 1788
HindII	GTYRAC	3 cut(s)	424, 1087, 1788
HindIII	AAGCTT	1 cut(s)	248
HpaII	CCGG	9 cut(s)	175, 207, 572, 947, 1362, 1715, 1736, 1869, 1995
HphI	GGTGA	5 cut(s)	124, 434, 1201, 1468, 1858
Hpy166II	GTNNAC	5 cut(s)	424, 1042, 1087, 1674, 1788
Hpy188I	TCNGA	6 cut(s)	97, 182, 343, 1050, 1162, 1643
Hpy8I	GTNNAC	5 cut(s)	424, 1042, 1087, 1674, 1788
Hpy99I	CGWCG	3 cut(s)	425, 754, 973
HpyAV	CCTTC	5 cut(s)	251, 827, 1323, 1910, 1969
HpyCH4III	ACNGT	8 cut(s)	44, 754, 988, 1046, 1354, 1447, 1948, 2001
HpyCH4IV	ACGT	5 cut(s)	5, 171, 189, 521, 1974
HpyCH4V	TGCA	4 cut(s)	581, 1370, 1705, 1747
HpyF10VI	GCNNNNNNNGC	9 cut(s)	54, 121, 212, 267, 401, 410, 471, 1289, 1367
HpyF3I	CTNAG	7 cut(s)	689, 1032, 1049, 1269, 1486, 1599, 1874
HpySE526I	ACGT	5 cut(s)	5, 171, 189, 521, 1974
Hsp92I	GRCGYC	4 cut(s)	5, 240, 268, 1776
Hsp92II	CATG	9 cut(s)	775, 1258, 1390, 1508, 1571, 1672, 1759, 1912, 1954
HspAI	GCGC	8 cut(s)	127, 227, 268, 380, 390, 402, 667, 1742
KasI	GGCGCC	1 cut(s)	267
Kpn2I	TCCGGA	3 cut(s)	174, 946, 1994
Ksp22I	TGATCA	3 cut(s)	768, 1120, 1564
KspI	CCGCGG	1 cut(s)	396
LmnI	GCTCC	5 cut(s)	234, 318, 387, 883, 1919
Lsp1109I	GCAGC	9 cut(s)	141, 1025, 1399, 1506, 1579, 1582, 1731, 1751, 1813
LweI	GCATC	4 cut(s)	70, 720, 1506, 1610
MaeI	CTAG	6 cut(s)	212, 254, 723, 1065, 1341, 1772
MaeII	ACGT	5 cut(s)	5, 171, 189, 521, 1974
MaeIII	GTNAC	8 cut(s)	241, 611, 640, 698, 1027, 1305, 1332, 1603
MboII	GAAGA	6 cut(s)	757, 931, 1068, 1286, 1444, 1983
MfeI	CAATTG	1 cut(s)	582
MhlI	GDGCHC	2 cut(s)	315, 1555
Mly113I	GGCGCC	1 cut(s)	268
MlyI	GAGTC	3 cut(s)	338, 419, 1478
MroI	TCCGGA	3 cut(s)	174, 946, 1994
MroXI	GAANNNNTTC	1 cut(s)	1983
MseI	TTAA	1 cut(s)	36
MslI	CAYNNNNRTG	2 cut(s)	776, 1259
MspA1I	CMGCKG	2 cut(s)	395, 1016
MspI	CCGG	9 cut(s)	175, 207, 572, 947, 1362, 1715, 1736, 1869, 1995
MspR9I	CCNGG	5 cut(s)	572, 636, 1736, 1848, 1870
MunI	CAATTG	1 cut(s)	582
Mva1269I	GAATGC	1 cut(s)	1861
MvaI	CCWGG	2 cut(s)	636, 1848
MvnI	CGCG	7 cut(s)	127, 227, 309, 390, 395, 402, 667
MwoI	GCNNNNNNNGC	9 cut(s)	54, 121, 212, 267, 401, 410, 471, 1289, 1367
NarI	GGCGCC	1 cut(s)	268
NciI	CCSGG	3 cut(s)	572, 1736, 1870
NlaIII	CATG	9 cut(s)	775, 1258, 1390, 1508, 1571, 1672, 1759, 1912, 1954
NlaIV	GGNNCC	2 cut(s)	269, 1932
NmeAIII	GCCGAG	1 cut(s)	336
NmuCI	GTSAC	4 cut(s)	241, 640, 1027, 1603
NspI	RCATGY	1 cut(s)	1672
PagI	TCATGA	1 cut(s)	1950
PciI	ACATGT	1 cut(s)	1668
PcsI	WCGNNNNNNNCGW	3 cut(s)	186, 755, 1980
PctI	GAATGC	1 cut(s)	1861
PdmI	GAANNNNTTC	1 cut(s)	1983
PfeI	GAWTC	7 cut(s)	538, 937, 1004, 1073, 1644, 1654, 1843
PfoI	TCCNGGA	1 cut(s)	1846
PleI	GAGTC	3 cut(s)	338, 419, 1478
PluTI	GGCGCC	1 cut(s)	271
PpsI	GAGTC	3 cut(s)	338, 419, 1478
Ppu21I	YACGTR	2 cut(s)	190, 1975
PscI	ACATGT	1 cut(s)	1668
Psp124BI	GAGCTC	1 cut(s)	315
Psp6I	CCWGG	2 cut(s)	634, 1846
PspFI	CCCAGC	1 cut(s)	461
PspGI	CCWGG	2 cut(s)	634, 1846
PspN4I	GGNNCC	2 cut(s)	269, 1932
PspPI	GGNCC	3 cut(s)	199, 282, 1931
PsrI	GAACNNNNNNTAC	2 cut(s)	1968, 2000
PstNI	CAGNNNCTG	1 cut(s)	1412
RsaI	GTAC	6 cut(s)	188, 399, 716, 1348, 1667, 1973
RsaNI	GTAC	6 cut(s)	187, 398, 715, 1347, 1666, 1972
RseI	CAYNNNNRTG	2 cut(s)	776, 1259
SacI	GAGCTC	1 cut(s)	315
SacII	CCGCGG	1 cut(s)	396
SalI	GTCGAC	2 cut(s)	422, 1085
SaqAI	TTAA	1 cut(s)	36
Sau96I	GGNCC	3 cut(s)	199, 282, 1931
ScaI	AGTACT	1 cut(s)	1348
SchI	GAGTC	3 cut(s)	338, 419, 1478
ScrFI	CCNGG	5 cut(s)	572, 636, 1736, 1848, 1870
SduI	GDGCHC	2 cut(s)	315, 1555
SfaNI	GCATC	4 cut(s)	70, 720, 1506, 1610
SfcI	CTRYAG	1 cut(s)	1216
SfoI	GGCGCC	1 cut(s)	269
Sfr303I	CCGCGG	1 cut(s)	396
SgrBI	CCGCGG	1 cut(s)	396
SmiMI	CAYNNNNRTG	2 cut(s)	776, 1259
SnaBI	TACGTA	1 cut(s)	1975
SpeI	ACTAGT	3 cut(s)	722, 1064, 1340
SspDI	GGCGCC	1 cut(s)	267
SspI	AATATT	1 cut(s)	1375
SspMI	CTAG	6 cut(s)	212, 254, 723, 1065, 1341, 1772
SstI	GAGCTC	1 cut(s)	315
StyD4I	CCNGG	5 cut(s)	570, 634, 1734, 1846, 1868
StyI	CCWWGG	1 cut(s)	195
TaaI	ACNGT	8 cut(s)	44, 754, 988, 1046, 1354, 1447, 1948, 2001
TaiI	ACGT	5 cut(s)	8, 174, 192, 524, 1977
TaqI	TCGA	9 cut(s)	423, 630, 854, 1002, 1086, 1094, 1184, 1325, 1535
TaqII	GACCGA	1 cut(s)	176
TatI	WGTACW	2 cut(s)	1346, 1665
TauI	GCSGC	7 cut(s)	51, 54, 57, 124, 127, 154, 395
TfiI	GAWTC	7 cut(s)	538, 937, 1004, 1073, 1644, 1654, 1843
Tru1I	TTAA	1 cut(s)	36
Tru9I	TTAA	1 cut(s)	36
TscAI	CASTG	5 cut(s)	325, 439, 993, 1452, 1585
TseFI	GTSAC	4 cut(s)	241, 640, 1027, 1603
TseI	GCWGC	9 cut(s)	154, 1013, 1412, 1519, 1592, 1595, 1739, 1744, 1826
Tsp45I	GTSAC	4 cut(s)	241, 640, 1027, 1603
TspDTI	ATGAA	8 cut(s)	854, 872, 1160, 1229, 1243, 1375, 1420, 1646
TspGWI	ACGGA	2 cut(s)	687, 1496
TspRI	CASTG	5 cut(s)	325, 439, 993, 1452, 1585
XapI	RAATTY	4 cut(s)	484, 942, 1250, 1979
XbaI	TCTAGA	2 cut(s)	253, 1771
XceI	RCATGY	1 cut(s)	1672
XmiI	GTMKAC	3 cut(s)	423, 1086, 1673
XmnI	GAANNNNTTC	1 cut(s)	1983
XspI	CTAG	6 cut(s)	212, 254, 723, 1065, 1341, 1772
ZraI	GACGTC	1 cut(s)	6
ZrmI	AGTACT	1 cut(s)	1348

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.