Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0004461

Physical Location & Seq

Genomic Coordinates Forward (+)

81468378 .. 81470946

Gene Structure 2569 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000022165

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2025 bp

ATGACGTCATACACCACCGATTCCCCTCCTCCCATTAAACACCGTGGCCGCCGCCTCAAAAGAAAACCCGACCCCGCCAATGCCGACCCTCACTCCGAACCCGAACCCGACGCGCACCAGCCGCCGCGCCTCACCCGAGACCAATCGTTGCGGCTGCCTACCGACCCACACGTCCGGATCGGAATGTACGTGGCCCTGGCCCACGCCGGACTAGCTTTCTCACTCGCGCTCCTCTACGGGGTCACGAAGCTTCTAGAAGGCTACTGGCGCCCAATCCAATGGGCCATTCTCTGTTCTATGCCTCTCCGCGAGCTCCACACTGCTCTGGTTTCGTTCTGGTCTGAATCTCTCAATCTCGGTCTGTTCGAAACCCTCATTGCCCTCCCACGCGCAGCGGTACGCGCCACCACCGCCTCCCTCGTCGACTCCCGCACCGCCACTCACCGCCTCCTCAAACGCCCCTGCCCGCCTCCCCCGAAAAAGAATTTCAGGCAAGGTCTAAAATGTCCCCACTTCTCGAAAATTATACAACGGCTTTTCACGTTTGCCCTATTTGTGATTCTCTATGAGAACATAGGCTTTTACACAATCCCGGCATTTGCAATTGCTTGCGTTGTAGCTTATGTTTTGGGTTACAGAAGCATAGTGATCGATCCTGGTGTGACTACTACGCTTTCGGCACTTTCGCGCCGCGGTAGTAGGTTGAAACTGAGGAATAGTAACAGGGTTAGCAGGTACATTATTAGTTTGATGCTCAAAAGGTTGAAGACGACGGTTGCGATTGGCTTGATCATGGTGATGATAGTGGGGACTTTGTTTGGGATGGTTTTCTTTTCGTATAAGATTGGAATGGAAGGGAAGTTTGCTGTGATTTCGATGAAGGTTCATTTGGAACACCAACTGGAGCAGAATTACAACTATGCGGAGAGGGTTGGGTTGAAGAAATGGATGGATGAGAATCAAATTCCGGAGTTGATTGATGATTATGCGACCAAGTTTTATGAGACAGTGTTGCTGAATATCGATTCTTGGGCAGCGGATTACAATGTGACTGAGATTGTGGACAGTCTGAGGCATTATTTGACTCGTAATGATTCTTCTCCAGTCGACATTTCGCGTAATGGTGGTGTTGGCAATGTTGATCATAAGCAGATCAATAGCAATATCAATCAGCCCTTGTCTGGGAAGTTTCATAACATTCAATCGAGGGTGAGGAACAGAGAATGGGGAGTGATCTATAGGGATATTGATGATATTTTTCATTTTAGGAAATTCATGTCTATGATTGCTAAGGAAGACTTGGCAGAGAAAGCGAAAGCATATTTGTTACGGGGATTGGACATTTCGAGAAGGTTACTTACTAGTAGTACTACGGTTTTGGCCGGAGGTGCAAATATTTTGCTGTTCATGGCAGTCTCACTTGTTTCAGGTGCTGCTGGATTGTTCAATTTCATCTTTGAATTGACAGTGTTCTTCTGGCTTCTGTATTACCTAATCACCACGGACTCGGGAGGTGTTATGGATCATGTTTTGGGGATGCTGCCACTTTCAAGATCGACGAGGGTTAGATGTGCCCAAGTGCTTGATCATGCTGTTAGCAGTGTGCTGTTGGCTGCTGCTAAGGTCACATTCTTTCAAGGATGCCTCACATATCTCTTGTTCAGATTCTACCAGATTCATTTCCTGTACATGTCTACATCCCTTGCCCTGATGAGTGCCGTTTTGCAAATCACACCGGCTTGGCTTTTGTCAATCCCTGCAGCGCTGCAACTGGGCATGGAAGCGAAATATATAGACGCCATTATGTTGACATCAATCCATCAAATACTGCTGGAATATGGAACTGCAGCAATCCAAGATGAGATTCCAGGACAGAATGCCTACCTCACCGGGCTTAGCATACTTGGTGGCATTGCTCTTTTCCCATCCATGTTAGAAGGAGCAATTATGGGGCCTTTGCTGATGACAGTCATGATTGCCTTCAAAAATCTGTACGTAGAATTTGTTCTTTCTTCTGGACAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AI-2E_transport

Protein Analysis

675

Amino Acids

75.63

Weight (kDa)

9.43

Isoelectric Point (pI)

40.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004461)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55960
fragaria_vesca	FvH4_3g42400 FvH4_6g51530
malus_domestica	MD11G1036300.v1.1 MD17G1026100.v1.1
prunus_persica	Prupe.3G292600_v2.0.a1 Prupe.6G027100_v2.0.a1
pyrus_communis	pycom17g02120
rosa_chinensis	RchiOBHm_Chr5g0075891
rosa_laevigata	RLG00000022165 RLG00000036599
rosa_multiflora	Rmu_co8453001.1_g000001 Rmu_co8486383.1_g000001 Rmu_sc0002652.1_g000019
rosa_roxburghii	Rroxscaffold_1G00005790 Rroxscaffold_2G00079170 Rroxscaffold_2G00128200 Rroxscaffold_2G00128210 Rroxscaffold_3G00229540 Rroxscaffold_5G00350470
rosa_rugosa	Rorug02G0565800 Rorug05G0443300
rosa_samantha	Rh2AG646000 Rh2BG656700 Rh2CG621800 Rh2DG670100 Rh5AG500200 Rh5BG521300 Rh5CG545400 Rh5DG534100
rosa_wichuraiana	Rw2G053050 Rw5G046430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	170
AatII	GACGTC	1 cut(s)	8
Acc36I	ACCTGC	1 cut(s)	723
AccB1I	GGYRCC	1 cut(s)	267
AccI	GTMKAC	3 cut(s)	423, 1107, 1694
AccII	CGCG	9 cut(s)	113, 127, 227, 309, 390, 402, 688, 693, 1117
AccIII	TCCGGA	2 cut(s)	174, 967
AclWI	GGATC	3 cut(s)	185, 647, 1530
AcoI	YGGCCR	2 cut(s)	46, 1380
AcsI	RAATTY	4 cut(s)	484, 963, 1271, 2000
AcyI	GRCGYC	3 cut(s)	5, 268, 1797
AfaI	GTAC	6 cut(s)	188, 399, 737, 1369, 1688, 1994
AfeI	AGCGCT	1 cut(s)	1764
AfiI	CCNNNNNNNGG	3 cut(s)	238, 1181, 1182
AflIII	ACRYGT	2 cut(s)	169, 1689
AgsI	TTSAA	9 cut(s)	706, 766, 940, 1202, 1447, 1460, 1551, 1637, 1984
AhlI	ACTAGT	1 cut(s)	1361
AjiI	CACGTC	1 cut(s)	172
AjnI	CCWGG	3 cut(s)	195, 655, 1867
AjuI	GAANNNNNNNTTGG	6 cut(s)	270, 302, 872, 904, 1848, 1880
AluBI	AGCT	4 cut(s)	215, 250, 313, 620
AluI	AGCT	4 cut(s)	215, 250, 313, 620
Alw21I	GWGCWC	1 cut(s)	315
Alw26I	GTCTC	3 cut(s)	132, 998, 1420
AlwI	GGATC	3 cut(s)	185, 647, 1530
AlwNI	CAGNNNCTG	1 cut(s)	1433
Ama87I	CYCGRG	2 cut(s)	135, 1507
Aor13HI	TCCGGA	2 cut(s)	174, 967
Aor51HI	AGCGCT	1 cut(s)	1764
AoxI	GGCC	6 cut(s)	46, 192, 198, 282, 1380, 1952
ApoI	RAATTY	4 cut(s)	484, 963, 1271, 2000
Asp700I	GAANNNNTTC	1 cut(s)	2004
AspLEI	GCGC	8 cut(s)	115, 129, 229, 270, 392, 404, 690, 1765
AspS9I	GGNCC	4 cut(s)	193, 199, 282, 1952
AsuC2I	CCSGG	2 cut(s)	593, 1891
AsuHPI	GGTGA	6 cut(s)	124, 434, 808, 1222, 1489, 1879
AsuII	TTCGAA	1 cut(s)	366
AvaI	CYCGRG	2 cut(s)	135, 1507
BaeGI	GKGCMC	1 cut(s)	1576
BanI	GGYRCC	1 cut(s)	267
BanII	GRGCYC	1 cut(s)	315
BarI	GAAGNNNNNNTAC	4 cut(s)	1081, 1113, 1342, 1374
BbsI	GAAGAC	2 cut(s)	773, 1302
Bbv12I	GWGCWC	1 cut(s)	315
BccI	CCATC	4 cut(s)	817, 943, 1827, 1933
BceAI	ACGGC	2 cut(s)	548, 1703
BcgI	CGANNNNNNTGC	2 cut(s)	631, 665
BciT130I	CCWGG	3 cut(s)	197, 657, 1869
BclI	TGATCA	3 cut(s)	789, 1141, 1585
BcnI	CCSGG	2 cut(s)	593, 1891
BcoDI	GTCTC	3 cut(s)	132, 998, 1420
BcuI	ACTAGT	1 cut(s)	1361
BfaI	CTAG	3 cut(s)	212, 254, 1362
BfmI	CTRYAG	3 cut(s)	1237, 1758, 1845
BfoI	RGCGCY	2 cut(s)	271, 1766
BfuAI	ACCTGC	1 cut(s)	723
BlpI	GCTNAGC	1 cut(s)	1895
BmcAI	AGTACT	1 cut(s)	1369
Bme1390I	CCNGG	5 cut(s)	197, 593, 657, 1869, 1891
BmeT110I	CYCGRG	2 cut(s)	135, 1507
BmgBI	CACGTC	1 cut(s)	172
BmgT120I	GGNCC	4 cut(s)	193, 199, 282, 1952
BmiI	GGNNCC	2 cut(s)	269, 1953
BmrFI	CCNGG	5 cut(s)	197, 593, 657, 1869, 1891
BmrI	ACTGGG	1 cut(s)	1781
BmsI	GCATC	3 cut(s)	741, 1527, 1631
BmuI	ACTGGG	1 cut(s)	1781
BpiI	GAAGAC	2 cut(s)	773, 1302
BpmI	CTGGAG	2 cut(s)	923, 1086
Bpu10I	CCTNAGC	2 cut(s)	1290, 1620
Bpu1102I	GCTNAGC	1 cut(s)	1895
Bpu14I	TTCGAA	1 cut(s)	366
BpuMI	CCSGG	2 cut(s)	593, 1891
Bsa29I	ATCGAT	2 cut(s)	651, 1023
BsaAI	YACGTR	2 cut(s)	190, 1996
BsaBI	GATNNNNATC	1 cut(s)	957
BsaHI	GRCGYC	3 cut(s)	5, 268, 1797
BsaI	GGTCTC	1 cut(s)	132
BsaJI	CCNNGG	4 cut(s)	43, 195, 691, 1500
BsaWI	WCCGGW	2 cut(s)	174, 967
BsaXI	ACNNNNNCTCC	4 cut(s)	77, 107, 213, 243
Bsc4I	CCNNNNNNNGG	3 cut(s)	238, 1181, 1182
Bse118I	RCCGGY	1 cut(s)	1735
Bse1I	ACTGG	4 cut(s)	269, 906, 1103, 1776
Bse3DI	GCAATG	3 cut(s)	375, 1141, 1911
Bse8I	GATNNNNATC	1 cut(s)	957
BseAI	TCCGGA	2 cut(s)	174, 967
BseBI	CCWGG	3 cut(s)	197, 657, 1869
BseCI	ATCGAT	2 cut(s)	651, 1023
BseDI	CCNNGG	4 cut(s)	43, 195, 691, 1500
BseGI	GGATG	7 cut(s)	828, 954, 958, 1542, 1646, 1697, 1925
BseJI	GATNNNNATC	1 cut(s)	957
BseLI	CCNNNNNNNGG	3 cut(s)	238, 1181, 1182
BseMI	GCAATG	3 cut(s)	375, 1141, 1911
BseMII	CTCAG	3 cut(s)	701, 1044, 1061
BseNI	ACTGG	4 cut(s)	269, 906, 1103, 1776
BseRI	GAGGAG	3 cut(s)	18, 221, 440
BseSI	GKGCMC	1 cut(s)	1576
Bsh1236I	CGCG	9 cut(s)	113, 127, 227, 309, 390, 402, 688, 693, 1117
BshFI	GGCC	6 cut(s)	48, 194, 200, 284, 1382, 1954
BshNI	GGYRCC	1 cut(s)	267
BshVI	ATCGAT	2 cut(s)	651, 1023
BsiHKAI	GWGCWC	1 cut(s)	315
BsiHKCI	CYCGRG	2 cut(s)	135, 1507
BsiSI	CCGG	7 cut(s)	175, 207, 593, 968, 1383, 1736, 1890
BslFI	GGGAC	2 cut(s)	492, 823
BslI	CCNNNNNNNGG	3 cut(s)	238, 1181, 1182
BsmAI	GTCTC	3 cut(s)	132, 998, 1420
BsmFI	GGGAC	2 cut(s)	492, 823
BsmI	GAATGC	1 cut(s)	1882
BsnI	GGCC	6 cut(s)	48, 194, 200, 284, 1382, 1954
Bso31I	GGTCTC	1 cut(s)	132
BsoBI	CYCGRG	2 cut(s)	135, 1507
Bsp119I	TTCGAA	1 cut(s)	366
Bsp1286I	GDGCHC	2 cut(s)	315, 1576
Bsp13I	TCCGGA	2 cut(s)	174, 967
Bsp1407I	TGTACA	1 cut(s)	1686
Bsp1720I	GCTNAGC	1 cut(s)	1895
BspANI	GGCC	6 cut(s)	48, 194, 200, 284, 1382, 1954
BspCNI	CTCAG	3 cut(s)	702, 1045, 1062
BspDI	ATCGAT	2 cut(s)	651, 1023
BspEI	TCCGGA	2 cut(s)	174, 967
BspFNI	CGCG	9 cut(s)	113, 127, 227, 309, 390, 402, 688, 693, 1117
BspHI	TCATGA	1 cut(s)	1971
BspLI	GGNNCC	2 cut(s)	269, 1953
BspMAI	CTGCAG	2 cut(s)	1762, 1849
BspMI	ACCTGC	1 cut(s)	723
BspPI	GGATC	3 cut(s)	185, 647, 1530
BspT104I	TTCGAA	1 cut(s)	366
BspT107I	GGYRCC	1 cut(s)	267
BspTNI	GGTCTC	1 cut(s)	132
BsrDI	GCAATG	3 cut(s)	375, 1141, 1911
BsrFI	RCCGGY	1 cut(s)	1735
BsrGI	TGTACA	1 cut(s)	1686
BsrI	ACTGG	4 cut(s)	269, 906, 1103, 1776
BssAI	RCCGGY	1 cut(s)	1735
BssECI	CCNNGG	4 cut(s)	43, 195, 691, 1500
BssNI	GRCGYC	3 cut(s)	5, 268, 1797
Bst2UI	CCWGG	3 cut(s)	197, 657, 1869
Bst4CI	ACNGT	8 cut(s)	44, 775, 1009, 1067, 1375, 1468, 1969, 2022
BstACI	GRCGYC	3 cut(s)	5, 268, 1797
BstAUI	TGTACA	1 cut(s)	1686
BstBAI	YACGTR	2 cut(s)	190, 1996
BstBI	TTCGAA	1 cut(s)	366
BstC8I	GCNNGC	3 cut(s)	311, 467, 610
BstDEI	CTNAG	6 cut(s)	710, 1053, 1070, 1290, 1620, 1895
BstDSI	CCRYGG	3 cut(s)	43, 691, 1500
BstF5I	GGATG	7 cut(s)	828, 954, 958, 1542, 1646, 1697, 1925
BstFNI	CGCG	9 cut(s)	113, 127, 227, 309, 390, 402, 688, 693, 1117
BstH2I	RGCGCY	2 cut(s)	271, 1766
BstHHI	GCGC	8 cut(s)	115, 129, 229, 270, 392, 404, 690, 1765
BstMAI	GTCTC	3 cut(s)	132, 998, 1420
BstMWI	GCNNNNNNNGC	7 cut(s)	121, 212, 267, 401, 410, 1310, 1388
BstNI	CCWGG	3 cut(s)	197, 657, 1869
BstNSI	RCATGY	1 cut(s)	1693
BstSCI	CCNGG	5 cut(s)	195, 591, 655, 1867, 1889
BstSFI	CTRYAG	3 cut(s)	1237, 1758, 1845
BstSLI	GKGCMC	1 cut(s)	1576
BstSNI	TACGTA	1 cut(s)	1996
BstUI	CGCG	9 cut(s)	113, 127, 227, 309, 390, 402, 688, 693, 1117
BstV2I	GAAGAC	2 cut(s)	773, 1302
BstXI	CCANNNNNNTGG	1 cut(s)	279
Bsu15I	ATCGAT	2 cut(s)	651, 1023
BsuRI	GGCC	6 cut(s)	48, 194, 200, 284, 1382, 1954
BsuTUI	ATCGAT	2 cut(s)	651, 1023
BtgI	CCRYGG	3 cut(s)	43, 691, 1500
BtrI	CACGTC	1 cut(s)	172
BtsCI	GGATG	7 cut(s)	828, 954, 958, 1542, 1646, 1697, 1925
BtsI	GCAGTG	2 cut(s)	318, 1606
BtsIMutI	CAGTG	4 cut(s)	318, 1014, 1473, 1606
BveI	ACCTGC	1 cut(s)	723
Cac8I	GCNNGC	3 cut(s)	311, 467, 610
CaiI	CAGNNNCTG	1 cut(s)	1433
CciI	TCATGA	1 cut(s)	1971
CfoI	GCGC	8 cut(s)	115, 129, 229, 270, 392, 404, 690, 1765
Cfr10I	RCCGGY	1 cut(s)	1735
Cfr13I	GGNCC	4 cut(s)	193, 199, 282, 1952
Cfr42I	CCGCGG	1 cut(s)	694
ClaI	ATCGAT	2 cut(s)	651, 1023
CseI	GACGC	2 cut(s)	119, 1805
Csp6I	GTAC	6 cut(s)	187, 398, 736, 1368, 1687, 1993
CviAII	CATG	9 cut(s)	793, 1276, 1408, 1526, 1589, 1690, 1777, 1930, 1972
CviQI	GTAC	6 cut(s)	187, 398, 736, 1368, 1687, 1993
DdeI	CTNAG	6 cut(s)	710, 1053, 1070, 1290, 1620, 1895
DinI	GGCGCC	1 cut(s)	269
DrdI	GACNNNNNNGTC	1 cut(s)	170
DseDI	GACNNNNNNGTC	1 cut(s)	170
EaeI	YGGCCR	2 cut(s)	46, 1380
Ecl136II	GAGCTC	1 cut(s)	313
Eco105I	TACGTA	1 cut(s)	1996
Eco24I	GRGCYC	1 cut(s)	315
Eco31I	GGTCTC	1 cut(s)	132
Eco47III	AGCGCT	1 cut(s)	1764
Eco53kI	GAGCTC	1 cut(s)	313
Eco88I	CYCGRG	2 cut(s)	135, 1507
EcoICRI	GAGCTC	1 cut(s)	313
EcoO109I	RGGNCCY	1 cut(s)	1952
EcoRII	CCWGG	3 cut(s)	195, 655, 1867
EcoT38I	GRGCYC	1 cut(s)	315
EgeI	GGCGCC	1 cut(s)	269
EheI	GGCGCC	1 cut(s)	269
FaeI	CATG	9 cut(s)	796, 1279, 1411, 1529, 1592, 1693, 1780, 1933, 1975
FalI	AAGNNNNNCTT	2 cut(s)	1283, 1315
FaqI	GGGAC	2 cut(s)	492, 823
FatI	CATG	9 cut(s)	792, 1275, 1407, 1525, 1588, 1689, 1776, 1929, 1971
FauI	CCCGC	3 cut(s)	82, 437, 474
FbaI	TGATCA	3 cut(s)	789, 1141, 1585
FblI	GTMKAC	3 cut(s)	423, 1107, 1694
FokI	GGATG	7 cut(s)	835, 961, 965, 1549, 1653, 1684, 1912
FriOI	GRGCYC	1 cut(s)	315
FspBI	CTAG	3 cut(s)	212, 254, 1362
GlaI	GCGC	8 cut(s)	114, 128, 228, 269, 391, 403, 689, 1764
GsuI	CTGGAG	2 cut(s)	923, 1086
HaeII	RGCGCY	2 cut(s)	271, 1766
HaeIII	GGCC	6 cut(s)	48, 194, 200, 284, 1382, 1954
HapII	CCGG	7 cut(s)	175, 207, 593, 968, 1383, 1736, 1890
HgaI	GACGC	2 cut(s)	119, 1805
HhaI	GCGC	8 cut(s)	115, 129, 229, 270, 392, 404, 690, 1765
Hin1I	GRCGYC	3 cut(s)	5, 268, 1797
Hin1II	CATG	9 cut(s)	796, 1279, 1411, 1529, 1592, 1693, 1780, 1933, 1975
Hin6I	GCGC	8 cut(s)	113, 127, 227, 268, 390, 402, 688, 1763
HinP1I	GCGC	8 cut(s)	113, 127, 227, 268, 390, 402, 688, 1763
HincII	GTYRAC	3 cut(s)	424, 1108, 1809
HindII	GTYRAC	3 cut(s)	424, 1108, 1809
HindIII	AAGCTT	1 cut(s)	248
HpaII	CCGG	7 cut(s)	175, 207, 593, 968, 1383, 1736, 1890
HphI	GGTGA	6 cut(s)	124, 434, 808, 1222, 1489, 1879
Hpy166II	GTNNAC	5 cut(s)	424, 1063, 1108, 1695, 1809
Hpy188I	TCNGA	5 cut(s)	97, 182, 343, 1071, 1664
Hpy8I	GTNNAC	5 cut(s)	424, 1063, 1108, 1695, 1809
Hpy99I	CGWCG	4 cut(s)	113, 425, 775, 1561
HpyAV	CCTTC	6 cut(s)	251, 848, 874, 1344, 1931, 1990
HpyCH4III	ACNGT	8 cut(s)	44, 775, 1009, 1067, 1375, 1468, 1969, 2022
HpyCH4IV	ACGT	5 cut(s)	5, 171, 189, 542, 1995
HpyCH4V	TGCA	6 cut(s)	602, 1391, 1726, 1760, 1768, 1847
HpyF10VI	GCNNNNNNNGC	7 cut(s)	121, 212, 267, 401, 410, 1310, 1388
HpyF3I	CTNAG	6 cut(s)	710, 1053, 1070, 1290, 1620, 1895
HpySE526I	ACGT	5 cut(s)	5, 171, 189, 542, 1995
Hsp92I	GRCGYC	3 cut(s)	5, 268, 1797
Hsp92II	CATG	9 cut(s)	796, 1279, 1411, 1529, 1592, 1693, 1780, 1933, 1975
HspAI	GCGC	8 cut(s)	113, 127, 227, 268, 390, 402, 688, 1763
KasI	GGCGCC	1 cut(s)	267
Kpn2I	TCCGGA	2 cut(s)	174, 967
Ksp22I	TGATCA	3 cut(s)	789, 1141, 1585
KspI	CCGCGG	1 cut(s)	694
LmnI	GCTCC	4 cut(s)	234, 318, 904, 1940
LweI	GCATC	3 cut(s)	741, 1527, 1631
MaeI	CTAG	3 cut(s)	212, 254, 1362
MaeII	ACGT	5 cut(s)	5, 171, 189, 542, 1995
MaeIII	GTNAC	8 cut(s)	241, 632, 661, 719, 1048, 1326, 1353, 1624
MboII	GAAGA	6 cut(s)	778, 952, 1089, 1307, 1465, 2004
MfeI	CAATTG	1 cut(s)	603
MhlI	GDGCHC	2 cut(s)	315, 1576
Mly113I	GGCGCC	1 cut(s)	268
MlyI	GAGTC	3 cut(s)	419, 1078, 1499
MroI	TCCGGA	2 cut(s)	174, 967
MroXI	GAANNNNTTC	1 cut(s)	2004
MseI	TTAA	1 cut(s)	36
MslI	CAYNNNNRTG	2 cut(s)	797, 1280
MspA1I	CMGCKG	3 cut(s)	395, 693, 1037
MspI	CCGG	7 cut(s)	175, 207, 593, 968, 1383, 1736, 1890
MspR9I	CCNGG	5 cut(s)	197, 593, 657, 1869, 1891
MunI	CAATTG	1 cut(s)	603
Mva1269I	GAATGC	1 cut(s)	1882
MvaI	CCWGG	3 cut(s)	197, 657, 1869
MvnI	CGCG	9 cut(s)	113, 127, 227, 309, 390, 402, 688, 693, 1117
MwoI	GCNNNNNNNGC	7 cut(s)	121, 212, 267, 401, 410, 1310, 1388
NarI	GGCGCC	1 cut(s)	268
NciI	CCSGG	2 cut(s)	593, 1891
NlaIII	CATG	9 cut(s)	796, 1279, 1411, 1529, 1592, 1693, 1780, 1933, 1975
NlaIV	GGNNCC	2 cut(s)	269, 1953
NmuCI	GTSAC	4 cut(s)	241, 661, 1048, 1624
NspI	RCATGY	1 cut(s)	1693
NspV	TTCGAA	1 cut(s)	366
PagI	TCATGA	1 cut(s)	1971
PciI	ACATGT	1 cut(s)	1689
PcsI	WCGNNNNNNNCGW	3 cut(s)	186, 363, 776
PctI	GAATGC	1 cut(s)	1882
PdmI	GAANNNNTTC	1 cut(s)	2004
PfeI	GAWTC	9 cut(s)	20, 344, 559, 958, 1025, 1094, 1665, 1675, 1864
PfoI	TCCNGGA	1 cut(s)	1867
PleI	GAGTC	3 cut(s)	419, 1078, 1499
PluTI	GGCGCC	1 cut(s)	271
PpsI	GAGTC	3 cut(s)	419, 1078, 1499
Ppu21I	YACGTR	2 cut(s)	190, 1996
PscI	ACATGT	1 cut(s)	1689
Psp124BI	GAGCTC	1 cut(s)	315
Psp6I	CCWGG	3 cut(s)	195, 655, 1867
PspGI	CCWGG	3 cut(s)	195, 655, 1867
PspN4I	GGNNCC	2 cut(s)	269, 1953
PspPI	GGNCC	4 cut(s)	193, 199, 282, 1952
PsrI	GAACNNNNNNTAC	2 cut(s)	1989, 2021
PstI	CTGCAG	2 cut(s)	1762, 1849
PstNI	CAGNNNCTG	1 cut(s)	1433
RsaI	GTAC	6 cut(s)	188, 399, 737, 1369, 1688, 1994
RsaNI	GTAC	6 cut(s)	187, 398, 736, 1368, 1687, 1993
RseI	CAYNNNNRTG	2 cut(s)	797, 1280
SacI	GAGCTC	1 cut(s)	315
SacII	CCGCGG	1 cut(s)	694
SalI	GTCGAC	2 cut(s)	422, 1106
SaqAI	TTAA	1 cut(s)	36
Sau96I	GGNCC	4 cut(s)	193, 199, 282, 1952
ScaI	AGTACT	1 cut(s)	1369
SchI	GAGTC	3 cut(s)	419, 1078, 1499
ScrFI	CCNGG	5 cut(s)	197, 593, 657, 1869, 1891
SduI	GDGCHC	2 cut(s)	315, 1576
SfaNI	GCATC	3 cut(s)	741, 1527, 1631
SfcI	CTRYAG	3 cut(s)	1237, 1758, 1845
SfoI	GGCGCC	1 cut(s)	269
Sfr303I	CCGCGG	1 cut(s)	694
SfuI	TTCGAA	1 cut(s)	366
SgrBI	CCGCGG	1 cut(s)	694
SmiMI	CAYNNNNRTG	2 cut(s)	797, 1280
SnaBI	TACGTA	1 cut(s)	1996
SpeI	ACTAGT	1 cut(s)	1361
SspDI	GGCGCC	1 cut(s)	267
SspI	AATATT	1 cut(s)	1396
SspMI	CTAG	3 cut(s)	212, 254, 1362
SstI	GAGCTC	1 cut(s)	315
StyD4I	CCNGG	5 cut(s)	195, 591, 655, 1867, 1889
TaaI	ACNGT	8 cut(s)	44, 775, 1009, 1067, 1375, 1468, 1969, 2022
TaiI	ACGT	5 cut(s)	8, 174, 192, 545, 1998
TaqII	GACCGA	1 cut(s)	347
TatI	WGTACW	2 cut(s)	1367, 1686
TauI	GCSGC	6 cut(s)	51, 54, 124, 127, 154, 693
TfiI	GAWTC	9 cut(s)	20, 344, 559, 958, 1025, 1094, 1665, 1675, 1864
Tru1I	TTAA	1 cut(s)	36
Tru9I	TTAA	1 cut(s)	36
TscAI	CASTG	4 cut(s)	325, 1014, 1473, 1606
TseFI	GTSAC	4 cut(s)	241, 661, 1048, 1624
Tsp45I	GTSAC	4 cut(s)	241, 661, 1048, 1624
TspDTI	ATGAA	8 cut(s)	875, 893, 1181, 1250, 1264, 1396, 1441, 1667
TspGWI	ACGGA	1 cut(s)	1517
TspRI	CASTG	4 cut(s)	325, 1014, 1473, 1606
XapI	RAATTY	4 cut(s)	484, 963, 1271, 2000
XbaI	TCTAGA	1 cut(s)	253
XceI	RCATGY	1 cut(s)	1693
XmiI	GTMKAC	3 cut(s)	423, 1107, 1694
XmnI	GAANNNNTTC	1 cut(s)	2004
XspI	CTAG	3 cut(s)	212, 254, 1362
ZraI	GACGTC	1 cut(s)	6
ZrmI	AGTACT	1 cut(s)	1369

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.