Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0004461

Physical Location & Seq

Genomic Coordinates Reverse (-)

1882740 .. 1885067

Gene Structure 2328 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1026100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2127 bp

ATGCCATCAACCTCTAATCATCCGATTAATCCTCCTCCTCCTCGCACAAACCTCAATTGCCACCGCCGCCAACGCCGCAAGCAGAAAAACACTCACCCCATCCTCGATAATCCCGATCCCGACCCGCATTCGGAACCCGAATCCTCCCACCCTCCACCACCAGCCGCACCCGAACCCGAACCCAAACCCCAAACCGAACCATCACCGTCGTCGCCATTGCCGATCGATGACCCTCACGTTCGGATCGCGATGTACGTGGCGATGGCCCACGCGGGCCTCGCCTTCTCGCTGGCCCTCCTCTACGGCGTCACGAAGCTCCTCCAAGGCTACTGGCGGCCGATCCACTGGGCGATCCTCTGCTCGATGCCTCTCCGCGAGCTCCACACCGCCCTCGTCTCCTTCTGGTCCCACTCCCTCAACCTCGGCCTCTTCGAAACGCTCATTGCCATCCCGATCGCCGCCCTCCGCGCCACCACCGCCTCCCTCGTCGATTCCCACACCGCCATCCAGTGCTGCCTTCTCCGCGGCCGCCCCAACCGCAGAAAGAGGCAGATCAGATTCTCTAAGCTCGTCCAATGGCTCATCTCTTTCGCTCTCTTCGTCATCGTATACGAGAGCATAGGCATTATCTCCATCCCGGCTTTTGCCGCGGCTTGCTTCATCGCCTACTCTCTCGGTTACAGAAGCATTCTGATTGATCGGGGCGTCGCCACCACTCTCTCTGCCATCTCCTCTGTTCGCCGCAGCGGCAGATTAAAATTCAAAAATACCATGAATATTAACAGCAATAGTAACTCCCCTGCTAATTTTGGCGGGAAAATCAGCCGGTGCATTACGAGCATGATGCTCAACAGGTTGAAGACGGCGGTGGCGATTGGCCTGATCACGGTGATGATCGTGGGATCTGTGTTGGGATTCTTTTTCTTTTCGTATAAGATCGCAATGGAAGGGAAGGGGGCTGTGATTTCACTCAAAGCACATTTGGAAGAGATGAATTACGATTACGCCGAGAGGGTCGGATTCAAGAAATGGATGAATGCGAATCAGGTTCCGGAATTGATCGATGATTACGCCACCAAGTTCTTCGAAACTGTTTCGCAGAACATCGATTCTCTGGCGGCGCATTACAATGTGACGGAGGTTGTTGACAGTGTTAGGCATTACTTGAGTACTAATCACGATCAGATTCATAATCCCATGTCGAATAGTAATGAATCGGGCCTCAATTTTTCGAGTAGTATTAGTACTAATGGTGACGGTCAGCCTAATTTTTCAGAGAAGTTTCATGGCATTCAATCCCGGGTGAGGAACGGAGAATGGGGAGTGATCTATAGAGATATCGATGGCTTGTTTGGAGAATTCATGTCATTGATCGCAAGGGAAGACTTGGCGGAGAAAACGAAAGATTTCTTGCTGCAGGGTTTAGACCTCTCCAGAAGAGTACTCGCTAGCGGAACAACGGTTGTGGCCGGAGGAGCAAATCTGTTGTTTTTCATGGCGGTCTCGCTCGTTTCAGGGGCTGCAGGATTGTTCAATTTCTTCTTCGAATTGACGGTGTTCTTCTGGCTTTTGTACTACCTAATCACAACTGATTCAGGCGGCGTTATGGATCATGTCCTGGGAATGCTGCCCCTTTCGAAATCCACAAGGGTTCGGTGTGCTCAAGTGCTTGATCACGCTGTCAGCAGCGTGCTGTTGGCTGCTGCCAAGGTCACATTCTTTCAAGGGAGCCTTACGTATCTCTTGTTTCGATTCTACCAGATTCATTTCCTCTACATGTCTACATCCCTCGCTCTTATGAGCGCTGTTTTGCAAATTACACCGGCTTGGTTCTTGTCCATTCCGGCTGCGCTGCAGCTGGCCATGGAAGGGAGATATGTCAAGGCAGTTTTGGTGACGGCGGTTCATCAGATTCTGTTGGAATACGGCACAGCAGCTATCCAAGATGAGATTCCGGGACAGAACGCCTACCTCACTGGCCTCAGCATACTTGGGGGCATTGCTCTTTTCCCCTCCATGTTGGAAGGAGCGATTATGGGTCCTCTGCTGATGACAGTGATGATTGCCTTCAAGAATCTGTATGTAGAATTTGTCCTTGCTTCTGGAAAAGAAGCCACTGCTCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AI-2E_transport

Protein Analysis

709

Amino Acids

78.13

Weight (kDa)

8.86

Isoelectric Point (pI)

40.04

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004461)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55960
fragaria_vesca	FvH4_3g42400 FvH4_6g51530
malus_domestica	MD11G1036300.v1.1 MD17G1026100.v1.1
prunus_persica	Prupe.3G292600_v2.0.a1 Prupe.6G027100_v2.0.a1
pyrus_communis	pycom17g02120
rosa_chinensis	RchiOBHm_Chr5g0075891
rosa_laevigata	RLG00000022165 RLG00000036599
rosa_multiflora	Rmu_co8453001.1_g000001 Rmu_co8486383.1_g000001 Rmu_sc0002652.1_g000019
rosa_roxburghii	Rroxscaffold_1G00005790 Rroxscaffold_2G00079170 Rroxscaffold_2G00128200 Rroxscaffold_2G00128210 Rroxscaffold_3G00229540 Rroxscaffold_5G00350470
rosa_rugosa	Rorug02G0565800 Rorug05G0443300
rosa_samantha	Rh2AG646000 Rh2BG656700 Rh2CG621800 Rh2DG670100 Rh5AG500200 Rh5BG521300 Rh5CG545400 Rh5DG534100
rosa_wichuraiana	Rw2G053050 Rw5G046430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	609, 1781
AccII	CGCG	6 cut(s)	248, 272, 375, 468, 525, 650
AccIII	TCCGGA	1 cut(s)	1051
AclWI	GGATC	6 cut(s)	110, 251, 334, 346, 910, 1617
AcoI	YGGCCR	4 cut(s)	335, 526, 1467, 1860
AcsI	RAATTY	3 cut(s)	758, 1358, 2087
AcyI	GRCGYC	2 cut(s)	306, 705
AfaI	GTAC	5 cut(s)	254, 1171, 1246, 1443, 1574
AfeI	AGCGCT	1 cut(s)	1804
AfiI	CCNNNNNNNGG	4 cut(s)	130, 886, 1305, 1869
AflIII	ACRYGT	1 cut(s)	1776
AgsI	TTSAA	7 cut(s)	763, 859, 1024, 1295, 1534, 1724, 2071
AjnI	CCWGG	1 cut(s)	1617
AjuI	GAANNNNNNNTTGG	4 cut(s)	1700, 1732, 1935, 1967
AluBI	AGCT	5 cut(s)	316, 379, 568, 1858, 1937
AluI	AGCT	5 cut(s)	316, 379, 568, 1858, 1937
Alw21I	GWGCWC	2 cut(s)	381, 1663
Alw26I	GTCTC	2 cut(s)	400, 1507
AlwI	GGATC	6 cut(s)	110, 251, 334, 346, 910, 1617
AlwNI	CAGNNNCTG	2 cut(s)	1520, 1915
Ama87I	CYCGRG	1 cut(s)	1299
Aor13HI	TCCGGA	1 cut(s)	1051
Aor51HI	AGCGCT	1 cut(s)	1804
ApoI	RAATTY	3 cut(s)	758, 1358, 2087
AseI	ATTAAT	1 cut(s)	27
Asp700I	GAANNNNTTC	1 cut(s)	1406
AspLEI	GCGC	4 cut(s)	470, 1123, 1805, 1852
AspS9I	GGNCC	6 cut(s)	265, 274, 292, 405, 1219, 2039
AsuC2I	CCSGG	4 cut(s)	638, 1300, 1301, 1956
AsuHPI	GGTGA	6 cut(s)	86, 195, 901, 1265, 1315, 1906
AsuII	TTCGAA	4 cut(s)	432, 1086, 1545, 1637
AsuNHI	GCTAGC	1 cut(s)	1448
AvaI	CYCGRG	1 cut(s)	1299
AvaII	GGWCC	2 cut(s)	405, 2039
BalI	TGGCCA	1 cut(s)	1862
BanII	GRGCYC	1 cut(s)	381
BbsI	GAAGAC	2 cut(s)	866, 1389
Bbv12I	GWGCWC	2 cut(s)	381, 1663
BbvCI	CCTCAGC	1 cut(s)	1982
BccI	CCATC	9 cut(s)	13, 107, 208, 256, 455, 512, 641, 734, 1337
BceAI	ACGGC	4 cut(s)	319, 879, 1914, 1942
BcgI	CGANNNNNNTGC	2 cut(s)	826, 860
BciT130I	CCWGG	1 cut(s)	1619
BclI	TGATCA	2 cut(s)	882, 1672
BcnI	CCSGG	4 cut(s)	638, 1300, 1301, 1956
BcoDI	GTCTC	2 cut(s)	400, 1507
BfaI	CTAG	1 cut(s)	1449
BfmI	CTRYAG	4 cut(s)	1330, 1415, 1521, 1853
BfoI	RGCGCY	1 cut(s)	1806
BglI	GCCNNNNNGGC	1 cut(s)	747
BmcAI	AGTACT	3 cut(s)	1171, 1246, 1443
Bme1390I	CCNGG	5 cut(s)	638, 1300, 1301, 1619, 1956
Bme18I	GGWCC	2 cut(s)	405, 2039
BmeT110I	CYCGRG	1 cut(s)	1299
BmgT120I	GGNCC	6 cut(s)	265, 274, 292, 405, 1219, 2039
BmiI	GGNNCC	5 cut(s)	135, 407, 1050, 1730, 2040
BmrFI	CCNGG	5 cut(s)	638, 1300, 1301, 1619, 1956
BmrI	ACTGGG	1 cut(s)	355
BmsI	GCATC	2 cut(s)	354, 834
BmtI	GCTAGC	1 cut(s)	1452
BmuI	ACTGGG	1 cut(s)	355
BpiI	GAAGAC	2 cut(s)	866, 1389
BpmI	CTGGAG	1 cut(s)	1417
Bpu10I	CCTNAGC	1 cut(s)	1982
Bpu14I	TTCGAA	4 cut(s)	432, 1086, 1545, 1637
BpuEI	CTTGAG	2 cut(s)	1186, 1647
BpuMI	CCSGG	4 cut(s)	638, 1300, 1301, 1956
Bsa29I	ATCGAT	4 cut(s)	225, 1062, 1107, 1341
BsaAI	YACGTR	2 cut(s)	256, 1737
BsaHI	GRCGYC	2 cut(s)	306, 705
BsaI	GGTCTC	1 cut(s)	1507
BsaJI	CCNNGG	8 cut(s)	322, 421, 523, 648, 1299, 1618, 1707, 1863
BsaWI	WCCGGW	1 cut(s)	1051
Bsc4I	CCNNNNNNNGG	4 cut(s)	130, 886, 1305, 1869
Bse118I	RCCGGY	2 cut(s)	825, 1822
Bse1I	ACTGG	4 cut(s)	335, 350, 508, 1981
Bse3DI	GCAATG	4 cut(s)	215, 441, 948, 1998
BseAI	TCCGGA	1 cut(s)	1051
BseBI	CCWGG	1 cut(s)	1619
BseCI	ATCGAT	4 cut(s)	225, 1062, 1107, 1341
BseDI	CCNNGG	8 cut(s)	322, 421, 523, 648, 1299, 1618, 1707, 1863
BseGI	GGATG	7 cut(s)	19, 99, 447, 504, 633, 1038, 1784
BseLI	CCNNNNNNNGG	4 cut(s)	130, 886, 1305, 1869
BseMI	GCAATG	4 cut(s)	215, 441, 948, 1998
BseMII	CTCAG	1 cut(s)	1996
BseNI	ACTGG	4 cut(s)	335, 350, 508, 1981
BseRI	GAGGAG	7 cut(s)	24, 27, 30, 287, 308, 721, 1488
BseX3I	CGGCCG	2 cut(s)	335, 526
Bsh1236I	CGCG	6 cut(s)	248, 272, 375, 468, 525, 650
Bsh1285I	CGRYCG	4 cut(s)	225, 338, 456, 529
BshVI	ATCGAT	4 cut(s)	225, 1062, 1107, 1341
BsiEI	CGRYCG	4 cut(s)	225, 338, 456, 529
BsiHKAI	GWGCWC	2 cut(s)	381, 1663
BsiHKCI	CYCGRG	1 cut(s)	1299
BsiSI	CCGG	8 cut(s)	638, 826, 1052, 1300, 1470, 1823, 1844, 1955
BslFI	GGGAC	2 cut(s)	391, 1971
BslI	CCNNNNNNNGG	4 cut(s)	130, 886, 1305, 1869
BsmAI	GTCTC	2 cut(s)	400, 1507
BsmBI	CGTCTC	1 cut(s)	400
BsmFI	GGGAC	2 cut(s)	391, 1971
BsmI	GAATGC	5 cut(s)	127, 687, 1042, 1290, 1629
Bso31I	GGTCTC	1 cut(s)	1507
BsoBI	CYCGRG	1 cut(s)	1299
Bsp119I	TTCGAA	4 cut(s)	432, 1086, 1545, 1637
Bsp1286I	GDGCHC	2 cut(s)	381, 1663
Bsp13I	TCCGGA	1 cut(s)	1051
Bsp19I	CCATGG	1 cut(s)	1863
Bsp68I	TCGCGA	1 cut(s)	248
BspCNI	CTCAG	1 cut(s)	1995
BspDI	ATCGAT	4 cut(s)	225, 1062, 1107, 1341
BspEI	TCCGGA	1 cut(s)	1051
BspFNI	CGCG	6 cut(s)	248, 272, 375, 468, 525, 650
BspLI	GGNNCC	5 cut(s)	135, 407, 1050, 1730, 2040
BspMAI	CTGCAG	3 cut(s)	1419, 1525, 1857
BspOI	GCTAGC	1 cut(s)	1452
BspPI	GGATC	6 cut(s)	110, 251, 334, 346, 910, 1617
BspT104I	TTCGAA	4 cut(s)	432, 1086, 1545, 1637
BspTNI	GGTCTC	1 cut(s)	1507
BsrDI	GCAATG	4 cut(s)	215, 441, 948, 1998
BsrFI	RCCGGY	2 cut(s)	825, 1822
BsrI	ACTGG	4 cut(s)	335, 350, 508, 1981
BssAI	RCCGGY	2 cut(s)	825, 1822
BssECI	CCNNGG	8 cut(s)	322, 421, 523, 648, 1299, 1618, 1707, 1863
BssNAI	GTATAC	1 cut(s)	610
BssNI	GRCGYC	2 cut(s)	306, 705
BssT1I	CCWWGG	3 cut(s)	322, 1707, 1863
Bst1107I	GTATAC	1 cut(s)	610
Bst2UI	CCWGG	1 cut(s)	1619
Bst4CI	ACNGT	8 cut(s)	207, 889, 1093, 1151, 1259, 1462, 1555, 2056
Bst6I	CTCTTC	4 cut(s)	434, 602, 981, 1432
BstACI	GRCGYC	2 cut(s)	306, 705
BstBAI	YACGTR	2 cut(s)	256, 1737
BstBI	TTCGAA	4 cut(s)	432, 1086, 1545, 1637
BstC8I	GCNNGC	8 cut(s)	80, 274, 291, 377, 655, 1450, 1691, 1860
BstDEI	CTNAG	2 cut(s)	564, 1982
BstDSI	CCRYGG	3 cut(s)	523, 648, 1863
BstF5I	GGATG	7 cut(s)	19, 99, 447, 504, 633, 1038, 1784
BstFNI	CGCG	6 cut(s)	248, 272, 375, 468, 525, 650
BstH2I	RGCGCY	1 cut(s)	1806
BstHHI	GCGC	4 cut(s)	470, 1123, 1805, 1852
BstMAI	GTCTC	2 cut(s)	400, 1507
BstMCI	CGRYCG	4 cut(s)	225, 338, 456, 529
BstNI	CCWGG	1 cut(s)	1619
BstNSI	RCATGY	1 cut(s)	1780
BstSCI	CCNGG	5 cut(s)	636, 1298, 1299, 1617, 1954
BstSFI	CTRYAG	4 cut(s)	1330, 1415, 1521, 1853
BstSNI	TACGTA	1 cut(s)	1737
BstUI	CGCG	6 cut(s)	248, 272, 375, 468, 525, 650
BstV2I	GAAGAC	2 cut(s)	866, 1389
BstX2I	RGATCY	1 cut(s)	902
BstYI	RGATCY	1 cut(s)	902
BstZ17I	GTATAC	1 cut(s)	610
BstZI	CGGCCG	2 cut(s)	335, 526
Bsu15I	ATCGAT	4 cut(s)	225, 1062, 1107, 1341
BsuTUI	ATCGAT	4 cut(s)	225, 1062, 1107, 1341
BtgI	CCRYGG	3 cut(s)	523, 648, 1863
BtgZI	GCGATG	3 cut(s)	263, 275, 646
BtsCI	GGATG	7 cut(s)	19, 99, 447, 504, 633, 1038, 1784
BtsI	GCAGTG	1 cut(s)	2115
BtsIMutI	CAGTG	6 cut(s)	343, 515, 1156, 1974, 2061, 2115
BtuMI	TCGCGA	1 cut(s)	248
Cac8I	GCNNGC	8 cut(s)	80, 274, 291, 377, 655, 1450, 1691, 1860
CaiI	CAGNNNCTG	2 cut(s)	1520, 1915
CciNI	GCGGCCGC	1 cut(s)	526
CfoI	GCGC	4 cut(s)	470, 1123, 1805, 1852
Cfr10I	RCCGGY	2 cut(s)	825, 1822
Cfr13I	GGNCC	6 cut(s)	265, 274, 292, 405, 1219, 2039
Cfr42I	CCGCGG	2 cut(s)	526, 651
Cfr9I	CCCGGG	1 cut(s)	1299
ClaI	ATCGAT	4 cut(s)	225, 1062, 1107, 1341
CseI	GACGC	2 cut(s)	295, 694
Csp6I	GTAC	5 cut(s)	253, 1170, 1245, 1442, 1573
CspCI	CAANNNNNGTGG	2 cut(s)	1446, 1481
CviQI	GTAC	5 cut(s)	253, 1170, 1245, 1442, 1573
DdeI	CTNAG	2 cut(s)	564, 1982
EaeI	YGGCCR	4 cut(s)	335, 526, 1467, 1860
EagI	CGGCCG	2 cut(s)	335, 526
Eam1104I	CTCTTC	4 cut(s)	434, 602, 981, 1432
EarI	CTCTTC	4 cut(s)	434, 602, 981, 1432
EciI	GGCGGA	1 cut(s)	1406
Ecl136II	GAGCTC	1 cut(s)	379
EclXI	CGGCCG	2 cut(s)	335, 526
Eco105I	TACGTA	1 cut(s)	1737
Eco130I	CCWWGG	3 cut(s)	322, 1707, 1863
Eco24I	GRGCYC	1 cut(s)	381
Eco31I	GGTCTC	1 cut(s)	1507
Eco32I	GATATC	1 cut(s)	1339
Eco47I	GGWCC	2 cut(s)	405, 2039
Eco47III	AGCGCT	1 cut(s)	1804
Eco52I	CGGCCG	2 cut(s)	335, 526
Eco53kI	GAGCTC	1 cut(s)	379
Eco88I	CYCGRG	1 cut(s)	1299
EcoICRI	GAGCTC	1 cut(s)	379
EcoO109I	RGGNCCY	1 cut(s)	2039
EcoRI	GAATTC	1 cut(s)	1358
EcoRII	CCWGG	1 cut(s)	1617
EcoRV	GATATC	1 cut(s)	1339
EcoT14I	CCWWGG	3 cut(s)	322, 1707, 1863
EcoT38I	GRGCYC	1 cut(s)	381
ErhI	CCWWGG	3 cut(s)	322, 1707, 1863
Esp3I	CGTCTC	1 cut(s)	400
FalI	AAGNNNNNCTT	2 cut(s)	1716, 1748
FaqI	GGGAC	2 cut(s)	391, 1971
FauI	CCCGC	3 cut(s)	132, 265, 806
FbaI	TGATCA	2 cut(s)	882, 1672
FblI	GTMKAC	2 cut(s)	609, 1781
FokI	GGATG	7 cut(s)	6, 86, 434, 491, 620, 1045, 1771
FriOI	GRGCYC	1 cut(s)	381
FspBI	CTAG	1 cut(s)	1449
GlaI	GCGC	4 cut(s)	469, 1122, 1804, 1851
GsuI	CTGGAG	1 cut(s)	1417
HaeII	RGCGCY	1 cut(s)	1806
HapII	CCGG	8 cut(s)	638, 826, 1052, 1300, 1470, 1823, 1844, 1955
HgaI	GACGC	2 cut(s)	295, 694
HhaI	GCGC	4 cut(s)	470, 1123, 1805, 1852
Hin1I	GRCGYC	2 cut(s)	306, 705
Hin6I	GCGC	4 cut(s)	468, 1121, 1803, 1850
HinP1I	GCGC	4 cut(s)	468, 1121, 1803, 1850
HincII	GTYRAC	1 cut(s)	1147
HindII	GTYRAC	1 cut(s)	1147
HpaII	CCGG	8 cut(s)	638, 826, 1052, 1300, 1470, 1823, 1844, 1955
HphI	GGTGA	6 cut(s)	86, 195, 901, 1265, 1315, 1906
Hpy166II	GTNNAC	3 cut(s)	610, 1147, 1782
Hpy188I	TCNGA	9 cut(s)	24, 133, 243, 557, 693, 1019, 1185, 1276, 1911
Hpy8I	GTNNAC	3 cut(s)	610, 1147, 1782
Hpy99I	CGWCG	4 cut(s)	211, 214, 491, 710
HpyAV	CCTTC	8 cut(s)	292, 409, 527, 941, 946, 1862, 2018, 2077
HpyCH4III	ACNGT	8 cut(s)	207, 889, 1093, 1151, 1259, 1462, 1555, 2056
HpyCH4IV	ACGT	3 cut(s)	237, 255, 1736
HpyCH4V	TGCA	5 cut(s)	831, 1417, 1523, 1813, 1855
HpyF3I	CTNAG	2 cut(s)	564, 1982
HpySE526I	ACGT	3 cut(s)	237, 255, 1736
Hsp92I	GRCGYC	2 cut(s)	306, 705
HspAI	GCGC	4 cut(s)	468, 1121, 1803, 1850
Kpn2I	TCCGGA	1 cut(s)	1051
Ksp22I	TGATCA	2 cut(s)	882, 1672
KspI	CCGCGG	2 cut(s)	526, 651
LmnI	GCTCC	5 cut(s)	321, 384, 1475, 1728, 2027
LweI	GCATC	2 cut(s)	354, 834
MaeI	CTAG	1 cut(s)	1449
MaeII	ACGT	3 cut(s)	237, 255, 1736
MaeIII	GTNAC	7 cut(s)	307, 677, 791, 1132, 1253, 1711, 1894
MfeI	CAATTG	1 cut(s)	55
MflI	RGATCY	1 cut(s)	902
MhlI	GDGCHC	2 cut(s)	381, 1663
MlsI	TGGCCA	1 cut(s)	1862
MluNI	TGGCCA	1 cut(s)	1862
MmeI	TCCRAC	3 cut(s)	997, 1899, 2001
Mox20I	TGGCCA	1 cut(s)	1862
MroI	TCCGGA	1 cut(s)	1051
MroXI	GAANNNNTTC	1 cut(s)	1406
MscI	TGGCCA	1 cut(s)	1862
MseI	TTAA	3 cut(s)	27, 755, 780
MslI	CAYNNNNRTG	2 cut(s)	890, 1128
Msp20I	TGGCCA	1 cut(s)	1862
MspA1I	CMGCKG	4 cut(s)	525, 650, 747, 1858
MspI	CCGG	8 cut(s)	638, 826, 1052, 1300, 1470, 1823, 1844, 1955
MspR9I	CCNGG	5 cut(s)	638, 1300, 1301, 1619, 1956
MunI	CAATTG	1 cut(s)	55
Mva1269I	GAATGC	5 cut(s)	127, 687, 1042, 1290, 1629
MvaI	CCWGG	1 cut(s)	1619
MvnI	CGCG	6 cut(s)	248, 272, 375, 468, 525, 650
NciI	CCSGG	4 cut(s)	638, 1300, 1301, 1956
NcoI	CCATGG	1 cut(s)	1863
NheI	GCTAGC	1 cut(s)	1448
NlaIV	GGNNCC	5 cut(s)	135, 407, 1050, 1730, 2040
NmeAIII	GCCGAG	2 cut(s)	402, 1033
NmuCI	GTSAC	5 cut(s)	307, 1132, 1253, 1711, 1894
NotI	GCGGCCGC	1 cut(s)	526
NruI	TCGCGA	1 cut(s)	248
NspI	RCATGY	1 cut(s)	1780
NspV	TTCGAA	4 cut(s)	432, 1086, 1545, 1637
PciI	ACATGT	1 cut(s)	1776
PcsI	WCGNNNNNNNCGW	7 cut(s)	111, 218, 252, 429, 597, 869, 1005
PctI	GAATGC	5 cut(s)	127, 687, 1042, 1290, 1629
PdmI	GAANNNNTTC	1 cut(s)	1406
PfoI	TCCNGGA	1 cut(s)	1954
Ple19I	CGATCG	2 cut(s)	225, 456
Ppu21I	YACGTR	2 cut(s)	256, 1737
PpuMI	RGGWCCY	1 cut(s)	2039
PscI	ACATGT	1 cut(s)	1776
PshBI	ATTAAT	1 cut(s)	27
Psp124BI	GAGCTC	1 cut(s)	381
Psp5II	RGGWCCY	1 cut(s)	2039
Psp6I	CCWGG	1 cut(s)	1617
PspGI	CCWGG	1 cut(s)	1617
PspN4I	GGNNCC	5 cut(s)	135, 407, 1050, 1730, 2040
PspPI	GGNCC	6 cut(s)	265, 274, 292, 405, 1219, 2039
PspPPI	RGGWCCY	1 cut(s)	2039
PstI	CTGCAG	3 cut(s)	1419, 1525, 1857
PstNI	CAGNNNCTG	2 cut(s)	1520, 1915
PsuI	RGATCY	1 cut(s)	902
PvuI	CGATCG	2 cut(s)	225, 456
PvuII	CAGCTG	1 cut(s)	1858
RruI	TCGCGA	1 cut(s)	248
RsaI	GTAC	5 cut(s)	254, 1171, 1246, 1443, 1574
RsaNI	GTAC	5 cut(s)	253, 1170, 1245, 1442, 1573
RseI	CAYNNNNRTG	2 cut(s)	890, 1128
SacI	GAGCTC	1 cut(s)	381
SacII	CCGCGG	2 cut(s)	526, 651
SaqAI	TTAA	3 cut(s)	27, 755, 780
Sau96I	GGNCC	6 cut(s)	265, 274, 292, 405, 1219, 2039
ScaI	AGTACT	3 cut(s)	1171, 1246, 1443
ScrFI	CCNGG	5 cut(s)	638, 1300, 1301, 1619, 1956
SduI	GDGCHC	2 cut(s)	381, 1663
SfaNI	GCATC	2 cut(s)	354, 834
SfcI	CTRYAG	4 cut(s)	1330, 1415, 1521, 1853
Sfr303I	CCGCGG	2 cut(s)	526, 651
SfuI	TTCGAA	4 cut(s)	432, 1086, 1545, 1637
SgrBI	CCGCGG	2 cut(s)	526, 651
SinI	GGWCC	2 cut(s)	405, 2039
SmaI	CCCGGG	1 cut(s)	1301
SmiMI	CAYNNNNRTG	2 cut(s)	890, 1128
SmlI	CTYRAG	2 cut(s)	1165, 1662
SmoI	CTYRAG	2 cut(s)	1165, 1662
SnaBI	TACGTA	1 cut(s)	1737
SspI	AATATT	1 cut(s)	778
SspMI	CTAG	1 cut(s)	1449
SstI	GAGCTC	1 cut(s)	381
StyD4I	CCNGG	5 cut(s)	636, 1298, 1299, 1617, 1954
StyI	CCWWGG	3 cut(s)	322, 1707, 1863
TaaI	ACNGT	8 cut(s)	207, 889, 1093, 1151, 1259, 1462, 1555, 2056
TaiI	ACGT	3 cut(s)	240, 258, 1739
TatI	WGTACW	4 cut(s)	1169, 1244, 1441, 1572
Tru1I	TTAA	3 cut(s)	27, 755, 780
Tru9I	TTAA	3 cut(s)	27, 755, 780
TscAI	CASTG	6 cut(s)	350, 515, 1156, 1981, 2061, 2122
TseFI	GTSAC	5 cut(s)	307, 1132, 1253, 1711, 1894
Tsp45I	GTSAC	5 cut(s)	307, 1132, 1253, 1711, 1894
TspGWI	ACGGA	2 cut(s)	1151, 1326
TspMI	CCCGGG	1 cut(s)	1299
TspRI	CASTG	6 cut(s)	350, 515, 1156, 1981, 2061, 2122
VpaK11BI	GGWCC	2 cut(s)	405, 2039
VspI	ATTAAT	1 cut(s)	27
XapI	RAATTY	3 cut(s)	758, 1358, 2087
XceI	RCATGY	1 cut(s)	1780
XmaI	CCCGGG	1 cut(s)	1299
XmiI	GTMKAC	2 cut(s)	609, 1781
XmnI	GAANNNNTTC	1 cut(s)	1406
XspI	CTAG	1 cut(s)	1449
ZrmI	AGTACT	3 cut(s)	1171, 1246, 1443

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.