FvH4_7g00600

Chaperone protein DNAj

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
1162061 .. 1168795
6735 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g00600.t3

Sequence Viewer

Length: 1299 bp
ATGGTTCGCTCCAATGGTGTCAGGCTCTTCTACTCCATCGCCCGCCGCTCCACGACCTCCGTTTACGCCAGAGTGCTTGGAGGAGGTGCTTATAGGAAATTTAACACCGGGATTTGCCATAATTCCAGGGTTTTAGGAAACTCTTCTTCTGCTACTAATGTTTACAGGAGGTTACCGGGAGCTCTGGGTACCAATTGGACTGCTGCAGTGAGATTAATTCATGCGACTGCATCTATGGCTGCAAGAGATTACTATGAGACACTTGGTGTTAGCAGGAATGCAAGTGCATCTGAAATAAAGAAAGCTTATTACGGGCTAGCAAAGAAGCTCCATCCAGACACAAATAAAGATGATCCCGAGGCAGAAAAGAAGTTCCAAGAAGTCTCAAAGGCGTATGAGGTATTGAAAGATGAGGAGAAGCGTCAACAATATGATGAGGTTGGCCATGCTGCATTTGAAGAACAAGGCTCGGGCTTTCCCAATGATTTCAGGAATCCATTTAAAGATATATTTGATGATAATATCTTCAACATGTTCCGTCAGAATTTTGGTGGTCAAGACATCAAGGTTCCTTTAGAACTATCCTTCATGGAAGCTGTTCAGGGATGTGCTAAAACTGTGACCTTTCAGGCCGCTGTGGCCTGTGAAGCATGCGGTGGAAGTGGTGTTCCCCCTGGCACCAGACCAGAATCATGCAAGCGCTGTAAAGGGTCTGGCATGACTTTCATGCAAACTGGTCCATTTAGGATGCAAACAACATGTTCTCAATGTGGTGGGTCTGGTAAAAGTTACACGAGACTTTGCAATTCGTGTAATGGAAAACGGGTCAAATTTGGAATGAAGTCAGTCAAATTAGATGTCATGCCAGGAGTAGATGACAACGAAACTATACGGGTATATGGTAGCGGTGGAGCCGATCCTGATGGAAATCAGCCTGGTGATCTTTATGTTACCATTAAGGTTAGGGAAGACCCAGTTTTCCGTAGAGATGGTGCCGATATCCATGTAGATGCTGTCCTGAGTATCACCCAGGCAATTTTGGGAGGAACTATACAGGTCCCAACTCTTACTGGGGATGTTGTACTAAAGGTGCGTGCAGGTACGCAACCTGGACAGAAGGTAGTCTTAAAGAAGAAAGGAATCAAGACGAGGAACTCTTATACCTTTGGTGATCAATATGTGCACTTTAATGTCAGCATCCCAACGAATCTGACTCAAAGACAGCGTGAATTAATCGAAGAGTTTTCCAAAGAGGAACAAGGGGAATACGTCAAGCGTGAGGCTGCAGGAGCATCTTAA

Protein Analysis

433

Amino Acids

47.39

Weight (kDa)

9.12

Isoelectric Point (pI)

34.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 112 - 174 9.6e-28 DnaJ domain
DnaJ_C PF01556 217 - 430 5.2e-44 DnaJ C terminal domain
DnaJ_CXXCXGXG PF00684 244 - 303 9.3e-12 DnaJ central domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1088
Acc65I GGTACC 1 cut(s) 188
AccB1I GGYRCC 3 cut(s) 188, 677, 992
AccBSI CCGCTC 1 cut(s) 48
AciI CCGC 5 cut(s) 43, 46, 633, 654, 906
AclWI GGATC 2 cut(s) 347, 911
AcoI YGGCCR 1 cut(s) 442
AcsI RAATTY 3 cut(s) 98, 544, 830
AdeI CACNNNGTG 1 cut(s) 266
AfaI GTAC 3 cut(s) 190, 1083, 1102
AfeI AGCGCT 1 cut(s) 701
AflIII ACRYGT 2 cut(s) 531, 758
AgsI TTSAA 3 cut(s) 406, 458, 529
AjnI CCWGG 6 cut(s) 125, 673, 865, 934, 1029, 1108
AloI GAACNNNNNNTCC 2 cut(s) 651, 683
AluBI AGCT 4 cut(s) 182, 305, 328, 596
AluI AGCT 4 cut(s) 182, 305, 328, 596
Alw21I GWGCWC 2 cut(s) 184, 1185
Alw26I GTCTC 3 cut(s) 251, 388, 790
Alw44I GTGCAC 1 cut(s) 1181
AlwI GGATC 2 cut(s) 347, 911
Ama87I CYCGRG 2 cut(s) 356, 469
Aor51HI AGCGCT 1 cut(s) 701
AoxI GGCC 3 cut(s) 442, 630, 639
ApaLI GTGCAC 1 cut(s) 1181
ApeKI GCWGC 4 cut(s) 203, 239, 449, 1283
ApoI RAATTY 3 cut(s) 98, 544, 830
ArsI GACNNNNNNTTYG 2 cut(s) 843, 875
AseI ATTAAT 2 cut(s) 215, 1232
Asp700I GAANNNNTTC 2 cut(s) 142, 597
Asp718I GGTACC 1 cut(s) 188
AspLEI GCGC 1 cut(s) 702
AspS9I GGNCC 2 cut(s) 737, 1057
AsuC2I CCSGG 2 cut(s) 109, 177
AsuHPI GGTGA 3 cut(s) 950, 1018, 1181
AsuNHI GCTAGC 1 cut(s) 316
AvaI CYCGRG 2 cut(s) 356, 469
AvaII GGWCC 2 cut(s) 737, 1057
BaeGI GKGCMC 1 cut(s) 1185
BalI TGGCCA 1 cut(s) 444
BanI GGYRCC 3 cut(s) 188, 677, 992
BanII GRGCYC 1 cut(s) 184
BauI CACGAG 1 cut(s) 793
BbsI GAAGAC 1 cut(s) 975
Bbv12I GWGCWC 2 cut(s) 184, 1185
BbvI GCAGC 4 cut(s) 190, 226, 436, 1270
BccI CCATC 4 cut(s) 44, 339, 917, 983
BciT130I CCWGG 6 cut(s) 127, 675, 867, 936, 1031, 1110
BclI TGATCA 1 cut(s) 1171
BcnI CCSGG 2 cut(s) 109, 177
BcoDI GTCTC 3 cut(s) 251, 388, 790
BfaI CTAG 1 cut(s) 317
BfmI CTRYAG 2 cut(s) 204, 1284
BfoI RGCGCY 1 cut(s) 703
BfuAI ACCTGC 1 cut(s) 1088
BglI GCCNNNNNGGC 1 cut(s) 638
BisI GCNGC 6 cut(s) 46, 204, 240, 450, 633, 1284
BlsI GCNGC 6 cut(s) 47, 205, 241, 451, 634, 1285
Bme1390I CCNGG 8 cut(s) 109, 127, 177, 675, 867, 936, 1031, 1110
Bme18I GGWCC 2 cut(s) 737, 1057
BmeT110I CYCGRG 2 cut(s) 356, 469
BmgT120I GGNCC 2 cut(s) 737, 1057
BmiI GGNNCC 6 cut(s) 190, 570, 679, 913, 994, 1059
BmrFI CCNGG 8 cut(s) 109, 127, 177, 675, 867, 936, 1031, 1110
BmrI ACTGGG 2 cut(s) 968, 1080
BmsI GCATC 5 cut(s) 239, 296, 738, 1000, 1206
BmtI GCTAGC 1 cut(s) 320
BmuI ACTGGG 2 cut(s) 968, 1080
BpiI GAAGAC 1 cut(s) 975
BpuMI CCSGG 2 cut(s) 109, 177
BsaBI GATNNNNATC 1 cut(s) 927
BsaJI CCNNGG 4 cut(s) 126, 357, 673, 1029
Bse1I ACTGG 3 cut(s) 739, 974, 1075
Bse8I GATNNNNATC 1 cut(s) 927
BseBI CCWGG 6 cut(s) 127, 675, 867, 936, 1031, 1110
BseDI CCNNGG 4 cut(s) 126, 357, 673, 1029
BseGI GGATG 5 cut(s) 331, 611, 753, 1081, 1197
BseJI GATNNNNATC 1 cut(s) 927
BseMII CTCAG 1 cut(s) 1010
BseNI ACTGG 3 cut(s) 739, 974, 1075
BseRI GAGGAG 2 cut(s) 96, 428
BseSI GKGCMC 1 cut(s) 1185
BseXI GCAGC 4 cut(s) 190, 226, 436, 1270
BsgI GTGCAG 1 cut(s) 1116
BshFI GGCC 3 cut(s) 444, 632, 641
BshNI GGYRCC 3 cut(s) 188, 677, 992
BsiHKAI GWGCWC 2 cut(s) 184, 1185
BsiHKCI CYCGRG 2 cut(s) 356, 469
BsiSI CCGG 2 cut(s) 108, 176
BslFI GGGAC 1 cut(s) 1043
BsmAI GTCTC 3 cut(s) 251, 388, 790
BsmFI GGGAC 1 cut(s) 1043
BsmI GAATGC 1 cut(s) 283
BsnI GGCC 3 cut(s) 444, 632, 641
BsoBI CYCGRG 2 cut(s) 356, 469
Bsp1286I GDGCHC 2 cut(s) 184, 1185
Bsp143I GATC 4 cut(s) 352, 916, 940, 1171
BspACI CCGC 5 cut(s) 43, 46, 633, 654, 906
BspANI GGCC 3 cut(s) 444, 632, 641
BspCNI CTCAG 1 cut(s) 1011
BspLI GGNNCC 6 cut(s) 190, 570, 679, 913, 994, 1059
BspMAI CTGCAG 2 cut(s) 208, 1288
BspMI ACCTGC 1 cut(s) 1088
BspOI GCTAGC 1 cut(s) 320
BspPI GGATC 2 cut(s) 347, 911
BspQI GCTCTTC 1 cut(s) 32
BspT107I GGYRCC 3 cut(s) 188, 677, 992
BsrBI CCGCTC 1 cut(s) 48
BsrI ACTGG 3 cut(s) 739, 974, 1075
BssECI CCNNGG 4 cut(s) 126, 357, 673, 1029
BssMI GATC 4 cut(s) 352, 916, 940, 1171
BssSI CACGAG 1 cut(s) 793
Bst2BI CACGAG 1 cut(s) 793
Bst2UI CCWGG 6 cut(s) 127, 675, 867, 936, 1031, 1110
Bst4CI ACNGT 1 cut(s) 619
Bst6I CTCTTC 3 cut(s) 32, 148, 1233
BstC8I GCNNGC 5 cut(s) 43, 318, 652, 698, 1095
BstDEI CTNAG 1 cut(s) 1019
BstEII GGTNACC 1 cut(s) 171
BstF5I GGATG 5 cut(s) 331, 611, 753, 1081, 1197
BstH2I RGCGCY 1 cut(s) 703
BstHHI GCGC 1 cut(s) 702
BstKTI GATC 4 cut(s) 355, 919, 943, 1174
BstMAI GTCTC 3 cut(s) 251, 388, 790
BstMBI GATC 4 cut(s) 352, 916, 940, 1171
BstMWI GCNNNNNNNGC 4 cut(s) 236, 638, 647, 1289
BstNI CCWGG 6 cut(s) 127, 675, 867, 936, 1031, 1110
BstNSI RCATGY 3 cut(s) 535, 654, 762
BstPI GGTNACC 1 cut(s) 171
BstSCI CCNGG 8 cut(s) 107, 125, 175, 673, 865, 934, 1029, 1108
BstSFI CTRYAG 2 cut(s) 204, 1284
BstSLI GKGCMC 1 cut(s) 1185
BstV1I GCAGC 4 cut(s) 190, 226, 436, 1270
BstV2I GAAGAC 1 cut(s) 975
BsuRI GGCC 3 cut(s) 444, 632, 641
BtgZI GCGATG 1 cut(s) 22
BtsCI GGATG 5 cut(s) 331, 611, 753, 1081, 1197
BtsI GCAGTG 1 cut(s) 213
BtsIMutI CAGTG 1 cut(s) 213
BveI ACCTGC 1 cut(s) 1088
Cac8I GCNNGC 5 cut(s) 43, 318, 652, 698, 1095
CfoI GCGC 1 cut(s) 702
Cfr13I GGNCC 2 cut(s) 737, 1057
CseI GACGC 1 cut(s) 410
Csp6I GTAC 3 cut(s) 189, 1082, 1101
CviQI GTAC 3 cut(s) 189, 1082, 1101
DdeI CTNAG 1 cut(s) 1019
DpnI GATC 4 cut(s) 354, 918, 942, 1173
DpnII GATC 4 cut(s) 352, 916, 940, 1171
DraI TTTAAA 1 cut(s) 502
DraIII CACNNNGTG 1 cut(s) 266
EaeI YGGCCR 1 cut(s) 442
Eam1104I CTCTTC 3 cut(s) 32, 148, 1233
EarI CTCTTC 3 cut(s) 32, 148, 1233
Ecl136II GAGCTC 1 cut(s) 182
Eco24I GRGCYC 1 cut(s) 184
Eco32I GATATC 1 cut(s) 1000
Eco47I GGWCC 2 cut(s) 737, 1057
Eco47III AGCGCT 1 cut(s) 701
Eco53kI GAGCTC 1 cut(s) 182
Eco88I CYCGRG 2 cut(s) 356, 469
Eco91I GGTNACC 1 cut(s) 171
EcoICRI GAGCTC 1 cut(s) 182
EcoO109I RGGNCCY 1 cut(s) 1057
EcoO65I GGTNACC 1 cut(s) 171
EcoRII CCWGG 6 cut(s) 125, 673, 865, 934, 1029, 1108
EcoRV GATATC 1 cut(s) 1000
EcoT38I GRGCYC 1 cut(s) 184
FalI AAGNNNNNCTT 2 cut(s) 1109, 1141
FaqI GGGAC 1 cut(s) 1043
FauI CCCGC 1 cut(s) 50
FbaI TGATCA 1 cut(s) 1171
Fnu4HI GCNGC 6 cut(s) 46, 204, 240, 450, 633, 1284
FokI GGATG 5 cut(s) 318, 618, 760, 1088, 1184
FriOI GRGCYC 1 cut(s) 184
Fsp4HI GCNGC 6 cut(s) 46, 204, 240, 450, 633, 1284
FspBI CTAG 1 cut(s) 317
GlaI GCGC 1 cut(s) 701
GluI GCNGC 6 cut(s) 46, 204, 240, 450, 633, 1284
HaeII RGCGCY 1 cut(s) 703
HaeIII GGCC 3 cut(s) 444, 632, 641
HapII CCGG 2 cut(s) 108, 176
HgaI GACGC 1 cut(s) 410
HhaI GCGC 1 cut(s) 702
Hin6I GCGC 1 cut(s) 700
HinP1I GCGC 1 cut(s) 700
HincII GTYRAC 1 cut(s) 425
HindII GTYRAC 1 cut(s) 425
HindIII AAGCTT 1 cut(s) 303
HinfI GANTC 5 cut(s) 493, 689, 1140, 1207, 1213
HpaII CCGG 2 cut(s) 108, 176
HphI GGTGA 3 cut(s) 950, 1018, 1181
Hpy166II GTNNAC 4 cut(s) 64, 163, 425, 1183
Hpy188I TCNGA 3 cut(s) 292, 543, 1212
Hpy188III TCNNGA 7 cut(s) 335, 356, 490, 557, 920, 1018, 1144
Hpy8I GTNNAC 4 cut(s) 64, 163, 425, 1183
HpyAV CCTTC 2 cut(s) 595, 1111
HpyCH4III ACNGT 1 cut(s) 619
HpyCH4IV ACGT 1 cut(s) 1269
HpyF10VI GCNNNNNNNGC 4 cut(s) 236, 638, 647, 1289
HpyF3I CTNAG 1 cut(s) 1019
HpySE526I ACGT 1 cut(s) 1269
HspAI GCGC 1 cut(s) 700
KpnI GGTACC 1 cut(s) 192
Ksp22I TGATCA 1 cut(s) 1171
Kzo9I GATC 4 cut(s) 352, 916, 940, 1171
LguI GCTCTTC 1 cut(s) 32
LmnI GCTCC 6 cut(s) 14, 53, 179, 333, 911, 1289
Lsp1109I GCAGC 4 cut(s) 190, 226, 436, 1270
LweI GCATC 5 cut(s) 239, 296, 738, 1000, 1206
MaeI CTAG 1 cut(s) 317
MaeII ACGT 1 cut(s) 1269
MaeIII GTNAC 4 cut(s) 171, 619, 788, 949
MalI GATC 4 cut(s) 354, 918, 942, 1173
MbiI CCGCTC 1 cut(s) 48
MboI GATC 4 cut(s) 352, 916, 940, 1171
MboII GAAGA 8 cut(s) 19, 135, 138, 470, 517, 980, 1144, 1250
MfeI CAATTG 1 cut(s) 193
MhlI GDGCHC 2 cut(s) 184, 1185
MlsI TGGCCA 1 cut(s) 444
MluNI TGGCCA 1 cut(s) 444
MlyI GAGTC 1 cut(s) 1207
Mox20I TGGCCA 1 cut(s) 444
MroXI GAANNNNTTC 2 cut(s) 142, 597
MscI TGGCCA 1 cut(s) 444
MseI TTAA 8 cut(s) 102, 215, 501, 957, 1127, 1188, 1232, 1297
MslI CAYNNNNRTG 2 cut(s) 1008, 1188
Msp20I TGGCCA 1 cut(s) 444
MspA1I CMGCKG 1 cut(s) 635
MspI CCGG 2 cut(s) 108, 176
MspR9I CCNGG 8 cut(s) 109, 127, 177, 675, 867, 936, 1031, 1110
MunI CAATTG 1 cut(s) 193
Mva1269I GAATGC 1 cut(s) 283
MvaI CCWGG 6 cut(s) 127, 675, 867, 936, 1031, 1110
MwoI GCNNNNNNNGC 4 cut(s) 236, 638, 647, 1289
NciI CCSGG 2 cut(s) 109, 177
NdeII GATC 4 cut(s) 352, 916, 940, 1171
NheI GCTAGC 1 cut(s) 316
NlaIV GGNNCC 6 cut(s) 190, 570, 679, 913, 994, 1059
NmuCI GTSAC 1 cut(s) 619
NspI RCATGY 3 cut(s) 535, 654, 762
PaeI GCATGC 1 cut(s) 654
PciI ACATGT 2 cut(s) 531, 758
PciSI GCTCTTC 1 cut(s) 32
PctI GAATGC 1 cut(s) 283
PdmI GAANNNNTTC 2 cut(s) 142, 597
PfeI GAWTC 4 cut(s) 493, 689, 1140, 1207
PkrI GCNGC 6 cut(s) 47, 205, 241, 451, 634, 1285
PleI GAGTC 1 cut(s) 1207
PpsI GAGTC 1 cut(s) 1207
PpuMI RGGWCCY 1 cut(s) 1057
PscI ACATGT 2 cut(s) 531, 758
PshBI ATTAAT 2 cut(s) 215, 1232
Psp124BI GAGCTC 1 cut(s) 184
Psp5II RGGWCCY 1 cut(s) 1057
Psp6I CCWGG 6 cut(s) 125, 673, 865, 934, 1029, 1108
PspEI GGTNACC 1 cut(s) 171
PspGI CCWGG 6 cut(s) 125, 673, 865, 934, 1029, 1108
PspN4I GGNNCC 6 cut(s) 190, 570, 679, 913, 994, 1059
PspPI GGNCC 2 cut(s) 737, 1057
PspPPI RGGWCCY 1 cut(s) 1057
PstI CTGCAG 2 cut(s) 208, 1288
RsaI GTAC 3 cut(s) 190, 1083, 1102
RsaNI GTAC 3 cut(s) 189, 1082, 1101
RseI CAYNNNNRTG 2 cut(s) 1008, 1188
SacI GAGCTC 1 cut(s) 184
SapI GCTCTTC 1 cut(s) 32
SaqAI TTAA 8 cut(s) 102, 215, 501, 957, 1127, 1188, 1232, 1297
SatI GCNGC 6 cut(s) 46, 204, 240, 450, 633, 1284
Sau3AI GATC 4 cut(s) 352, 916, 940, 1171
Sau96I GGNCC 2 cut(s) 737, 1057
SchI GAGTC 1 cut(s) 1207
ScrFI CCNGG 8 cut(s) 109, 127, 177, 675, 867, 936, 1031, 1110
SduI GDGCHC 2 cut(s) 184, 1185
SfaNI GCATC 5 cut(s) 239, 296, 738, 1000, 1206
SfcI CTRYAG 2 cut(s) 204, 1284
SfiI GGCCNNNNNGGCC 1 cut(s) 638
SinI GGWCC 2 cut(s) 737, 1057
SmiMI CAYNNNNRTG 2 cut(s) 1008, 1188
SphI GCATGC 1 cut(s) 654
SsiI CCGC 5 cut(s) 43, 46, 633, 654, 906
SspMI CTAG 1 cut(s) 317
SstI GAGCTC 1 cut(s) 184
StyD4I CCNGG 8 cut(s) 107, 125, 175, 673, 865, 934, 1029, 1108
TaaI ACNGT 1 cut(s) 619
TaiI ACGT 1 cut(s) 1272
TaqI TCGA 1 cut(s) 1236
TatI WGTACW 1 cut(s) 1081
TauI GCSGC 2 cut(s) 48, 635
TfiI GAWTC 4 cut(s) 493, 689, 1140, 1207
Tru1I TTAA 8 cut(s) 102, 215, 501, 957, 1127, 1188, 1232, 1297
Tru9I TTAA 8 cut(s) 102, 215, 501, 957, 1127, 1188, 1232, 1297
TscAI CASTG 1 cut(s) 213
TseFI GTSAC 1 cut(s) 619
TseI GCWGC 4 cut(s) 203, 239, 449, 1283
Tsp45I GTSAC 1 cut(s) 619
TspDTI ATGAA 4 cut(s) 209, 577, 715, 854
TspGWI ACGGA 3 cut(s) 49, 527, 971
TspRI CASTG 1 cut(s) 213
VneI GTGCAC 1 cut(s) 1181
VpaK11BI GGWCC 2 cut(s) 737, 1057
VspI ATTAAT 2 cut(s) 215, 1232
XapI RAATTY 3 cut(s) 98, 544, 830
XceI RCATGY 3 cut(s) 535, 654, 762
XmnI GAANNNNTTC 2 cut(s) 142, 597
XspI CTAG 1 cut(s) 317
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.