Rmu_sc0002833.1_g000038

Chaperone protein DNAj

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002833.1
Physical Location & Seq
Forward (+)
174085 .. 181895
7811 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002833.1_g000038.1.cds

Sequence Viewer

Length: 1467 bp
atgggtggctccaatggcgtcaggctcttttactctctcgctcgccgctccacacccgccgtatacgccagagtgcttggaggaggtggttataggacatttaacactgggatttgcaacaatcccagggttttaggaaatccttcttctactactactactattaccagtaatgtttacagaaggtttccgggagctttgagtaccaattggactgcagtgagatcaattcatggaactgcatctatggctgcgagagattactatgagacacttggggttagcaggaacgcaagtgcatcagaaataaagaaagcttattatgggctagcaaagaagctccatccagacacaaacaaagaagatcccgatgcagaaaggaagtttcaagaagtttcaaaggcgtacgaggtattgaaagatgaggagaagcgtcaacaatatgatgaggttggccatgctgcatttgaagaacaaggctcgggctttcccaatgatttcaggaatccgtttaaagatatatttgatgataatatcttcaacatgttccgtcagaattttggtggtcaagatatcaaggttgctttggaactatccttcatggaagctgttcagggatgtgccaaaactgtgacatttcaggctgcagtgccctgtgaagcatgcggtggaagtggtgttccccctggcaccagaccagaatcatgtaagcgctgtaaagggtctggcatgactttcatgcaaactggtccatttaggatgcagacaacatgttctcaatgtggtgggactggtaaaaattacacgagactttgcgactcatgtaatggaaaacgggtcaaatttggaatgaagtcagtcaagttagatatcatgccaggagtagacaataatgaaactatacgggtatttggtagcggtggagctgatcccgatggaaatcagcctggtgatctttatgttaccattaaggttagggaagacccagttttccgtagggatggtgccgatattcatgtagatgctgtcctgagtatcactcaggcaattttgggaggaactatccaggtcccaactcttacaggggatgttgtactaaaggtccgtgcaggtacgcaacctggacagaaggtagtcttaaagaagaaaggaatcaagacaaggagctcttattcctttggcgatcaatatgtgcactttaatgtcagcatcccaacgaatctgactcaaagacaacgtgaattaatcgaagagttttccaaagaggaacaaggggaatacgaggggacacatggggctgatctccaggcattgaacaatgcagtgtacatgaaaatggtgtcggcagggcagccgagtaatgagttcttgttcaaaatcctccaaacaaatagcacaggagggcgagcatttggacaaggatctggtcatttggaaatgaatgacagagaggccaaactcgattag

Protein Analysis

488

Amino Acids

53.36

Weight (kDa)

8.75

Isoelectric Point (pI)

33.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1100
AccB1I GGYRCC 2 cut(s) 689, 1004
AccBSI CCGCTC 1 cut(s) 48
AccI GTMKAC 2 cut(s) 63, 885
AciI CCGC 4 cut(s) 46, 57, 666, 918
AclWI GGATC 3 cut(s) 359, 923, 1429
AcoI YGGCCR 1 cut(s) 454
AcsI RAATTY 2 cut(s) 556, 842
AcyI GRCGYC 1 cut(s) 18
AfaI GTAC 5 cut(s) 205, 407, 1095, 1114, 1328
AfeI AGCGCT 1 cut(s) 713
AflIII ACRYGT 2 cut(s) 543, 770
AgsI TTSAA 7 cut(s) 389, 399, 418, 470, 541, 1315, 1375
AjnI CCWGG 7 cut(s) 125, 685, 877, 946, 1065, 1120, 1305
AloI GAACNNNNNNTCC 2 cut(s) 663, 695
AluBI AGCT 6 cut(s) 197, 317, 340, 608, 926, 1167
AluI AGCT 6 cut(s) 197, 317, 340, 608, 926, 1167
Alw21I GWGCWC 2 cut(s) 1169, 1197
Alw26I GTCTC 2 cut(s) 263, 802
Alw44I GTGCAC 1 cut(s) 1193
AlwI GGATC 3 cut(s) 359, 923, 1429
Ama87I CYCGRG 1 cut(s) 481
Aor51HI AGCGCT 1 cut(s) 713
AoxI GGCC 2 cut(s) 454, 1452
ApaLI GTGCAC 1 cut(s) 1193
ApeKI GCWGC 4 cut(s) 251, 461, 644, 1351
ApoI RAATTY 2 cut(s) 556, 842
AseI ATTAAT 1 cut(s) 1244
Asp700I GAANNNNTTC 2 cut(s) 142, 609
AspLEI GCGC 1 cut(s) 714
AspS9I GGNCC 3 cut(s) 749, 1069, 1102
AsuC2I CCSGG 1 cut(s) 192
AsuHPI GGTGA 1 cut(s) 962
AsuNHI GCTAGC 1 cut(s) 328
AvaI CYCGRG 1 cut(s) 481
AvaII GGWCC 3 cut(s) 749, 1069, 1102
BaeGI GKGCMC 2 cut(s) 654, 1197
BalI TGGCCA 1 cut(s) 456
BanI GGYRCC 2 cut(s) 689, 1004
BanII GRGCYC 1 cut(s) 1169
BauI CACGAG 1 cut(s) 805
BbsI GAAGAC 1 cut(s) 987
Bbv12I GWGCWC 2 cut(s) 1169, 1197
BbvI GCAGC 4 cut(s) 238, 448, 631, 1363
BccI CCATC 3 cut(s) 351, 929, 995
BceAI ACGGC 1 cut(s) 44
BciT130I CCWGG 7 cut(s) 127, 687, 879, 948, 1067, 1122, 1307
BcnI CCSGG 1 cut(s) 192
BcoDI GTCTC 2 cut(s) 263, 802
BfaI CTAG 1 cut(s) 329
BfmI CTRYAG 2 cut(s) 216, 645
BfoI RGCGCY 1 cut(s) 715
BfuAI ACCTGC 1 cut(s) 1100
BisI GCNGC 5 cut(s) 46, 252, 462, 645, 1352
BlsI GCNGC 5 cut(s) 47, 253, 463, 646, 1353
Bme1390I CCNGG 8 cut(s) 127, 192, 687, 879, 948, 1067, 1122, 1307
Bme18I GGWCC 3 cut(s) 749, 1069, 1102
BmeT110I CYCGRG 1 cut(s) 481
BmgT120I GGNCC 3 cut(s) 749, 1069, 1102
BmiI GGNNCC 4 cut(s) 10, 691, 1006, 1071
BmrFI CCNGG 8 cut(s) 127, 192, 687, 879, 948, 1067, 1122, 1307
BmrI ACTGGG 2 cut(s) 117, 980
BmsI GCATC 6 cut(s) 251, 308, 361, 750, 1012, 1218
BmtI GCTAGC 1 cut(s) 332
BmuI ACTGGG 2 cut(s) 117, 980
BpiI GAAGAC 1 cut(s) 987
BplI GAGNNNNNCTC 2 cut(s) 1024, 1056
BpmI CTGGAG 1 cut(s) 1289
BpuMI CCSGG 1 cut(s) 192
BsaBI GATNNNNATC 1 cut(s) 939
BsaHI GRCGYC 1 cut(s) 18
BsaJI CCNNGG 3 cut(s) 125, 126, 685
Bse1I ACTGG 5 cut(s) 112, 168, 751, 796, 986
Bse8I GATNNNNATC 1 cut(s) 939
BseBI CCWGG 7 cut(s) 127, 687, 879, 948, 1067, 1122, 1307
BseDI CCNNGG 3 cut(s) 125, 126, 685
BseGI GGATG 6 cut(s) 343, 623, 765, 1006, 1093, 1209
BseJI GATNNNNATC 1 cut(s) 939
BseMII CTCAG 2 cut(s) 1022, 1055
BseNI ACTGG 5 cut(s) 112, 168, 751, 796, 986
BseRI GAGGAG 2 cut(s) 96, 440
BseSI GKGCMC 2 cut(s) 654, 1197
BseXI GCAGC 4 cut(s) 238, 448, 631, 1363
BsgI GTGCAG 1 cut(s) 1128
BshFI GGCC 2 cut(s) 456, 1454
BshNI GGYRCC 2 cut(s) 689, 1004
BsiHKAI GWGCWC 2 cut(s) 1169, 1197
BsiHKCI CYCGRG 1 cut(s) 481
BsiSI CCGG 1 cut(s) 191
BsiWI CGTACG 1 cut(s) 405
BslFI GGGAC 3 cut(s) 802, 1055, 1300
BsmAI GTCTC 2 cut(s) 263, 802
BsmFI GGGAC 3 cut(s) 802, 1055, 1300
BsnI GGCC 2 cut(s) 456, 1454
BsoBI CYCGRG 1 cut(s) 481
Bsp1286I GDGCHC 3 cut(s) 654, 1169, 1197
Bsp1407I TGTACA 1 cut(s) 1326
Bsp143I GATC 7 cut(s) 224, 364, 928, 952, 1183, 1300, 1421
BspACI CCGC 4 cut(s) 46, 57, 666, 918
BspANI GGCC 2 cut(s) 456, 1454
BspCNI CTCAG 2 cut(s) 1023, 1054
BspLI GGNNCC 4 cut(s) 10, 691, 1006, 1071
BspMAI CTGCAG 2 cut(s) 220, 649
BspMI ACCTGC 1 cut(s) 1100
BspOI GCTAGC 1 cut(s) 332
BspPI GGATC 3 cut(s) 359, 923, 1429
BspT107I GGYRCC 2 cut(s) 689, 1004
BsrBI CCGCTC 1 cut(s) 48
BsrGI TGTACA 1 cut(s) 1326
BsrI ACTGG 5 cut(s) 112, 168, 751, 796, 986
BssECI CCNNGG 3 cut(s) 125, 126, 685
BssMI GATC 7 cut(s) 224, 364, 928, 952, 1183, 1300, 1421
BssNAI GTATAC 1 cut(s) 64
BssNI GRCGYC 1 cut(s) 18
BssSI CACGAG 1 cut(s) 805
Bst1107I GTATAC 1 cut(s) 64
Bst2BI CACGAG 1 cut(s) 805
Bst2UI CCWGG 7 cut(s) 127, 687, 879, 948, 1067, 1122, 1307
Bst4CI ACNGT 1 cut(s) 631
Bst6I CTCTTC 1 cut(s) 1245
BstACI GRCGYC 1 cut(s) 18
BstAUI TGTACA 1 cut(s) 1326
BstC8I GCNNGC 4 cut(s) 43, 330, 664, 1407
BstDEI CTNAG 2 cut(s) 1031, 1041
BstF5I GGATG 6 cut(s) 343, 623, 765, 1006, 1093, 1209
BstH2I RGCGCY 1 cut(s) 715
BstHHI GCGC 1 cut(s) 714
BstKTI GATC 7 cut(s) 227, 367, 931, 955, 1186, 1303, 1424
BstMAI GTCTC 2 cut(s) 263, 802
BstMBI GATC 7 cut(s) 224, 364, 928, 952, 1183, 1300, 1421
BstMWI GCNNNNNNNGC 3 cut(s) 15, 65, 248
BstNI CCWGG 7 cut(s) 127, 687, 879, 948, 1067, 1122, 1307
BstNSI RCATGY 3 cut(s) 547, 666, 774
BstSCI CCNGG 8 cut(s) 125, 190, 685, 877, 946, 1065, 1120, 1305
BstSFI CTRYAG 2 cut(s) 216, 645
BstSLI GKGCMC 2 cut(s) 654, 1197
BstV1I GCAGC 4 cut(s) 238, 448, 631, 1363
BstV2I GAAGAC 1 cut(s) 987
BstX2I RGATCY 2 cut(s) 364, 1421
BstYI RGATCY 2 cut(s) 364, 1421
BstZ17I GTATAC 1 cut(s) 64
BsuRI GGCC 2 cut(s) 456, 1454
BtsCI GGATG 6 cut(s) 343, 623, 765, 1006, 1093, 1209
BtsI GCAGTG 3 cut(s) 225, 654, 1329
BtsIMutI CAGTG 4 cut(s) 105, 225, 654, 1329
BveI ACCTGC 1 cut(s) 1100
Cac8I GCNNGC 4 cut(s) 43, 330, 664, 1407
CfoI GCGC 1 cut(s) 714
Cfr13I GGNCC 3 cut(s) 749, 1069, 1102
CseI GACGC 2 cut(s) 7, 422
Csp6I GTAC 5 cut(s) 204, 406, 1094, 1113, 1327
CviQI GTAC 5 cut(s) 204, 406, 1094, 1113, 1327
DdeI CTNAG 2 cut(s) 1031, 1041
DpnI GATC 7 cut(s) 226, 366, 930, 954, 1185, 1302, 1423
DpnII GATC 7 cut(s) 224, 364, 928, 952, 1183, 1300, 1421
DraI TTTAAA 1 cut(s) 514
EaeI YGGCCR 1 cut(s) 454
Eam1104I CTCTTC 1 cut(s) 1245
EarI CTCTTC 1 cut(s) 1245
Ecl136II GAGCTC 1 cut(s) 1167
Eco24I GRGCYC 1 cut(s) 1169
Eco32I GATATC 2 cut(s) 574, 871
Eco47I GGWCC 3 cut(s) 749, 1069, 1102
Eco47III AGCGCT 1 cut(s) 713
Eco53kI GAGCTC 1 cut(s) 1167
Eco88I CYCGRG 1 cut(s) 481
EcoICRI GAGCTC 1 cut(s) 1167
EcoO109I RGGNCCY 1 cut(s) 1069
EcoRII CCWGG 7 cut(s) 125, 685, 877, 946, 1065, 1120, 1305
EcoRV GATATC 2 cut(s) 574, 871
EcoT38I GRGCYC 1 cut(s) 1169
FalI AAGNNNNNCTT 4 cut(s) 1121, 1153, 1153, 1185
FaqI GGGAC 3 cut(s) 802, 1055, 1300
FauI CCCGC 1 cut(s) 64
FblI GTMKAC 2 cut(s) 63, 885
Fnu4HI GCNGC 5 cut(s) 46, 252, 462, 645, 1352
FokI GGATG 6 cut(s) 330, 630, 772, 1013, 1100, 1196
FriOI GRGCYC 1 cut(s) 1169
Fsp4HI GCNGC 5 cut(s) 46, 252, 462, 645, 1352
FspBI CTAG 1 cut(s) 329
GlaI GCGC 1 cut(s) 713
GluI GCNGC 5 cut(s) 46, 252, 462, 645, 1352
GsuI CTGGAG 1 cut(s) 1289
HaeII RGCGCY 1 cut(s) 715
HaeIII GGCC 2 cut(s) 456, 1454
HapII CCGG 1 cut(s) 191
HgaI GACGC 2 cut(s) 7, 422
HhaI GCGC 1 cut(s) 714
Hin1I GRCGYC 1 cut(s) 18
Hin6I GCGC 1 cut(s) 712
HinP1I GCGC 1 cut(s) 712
HincII GTYRAC 1 cut(s) 437
HindII GTYRAC 1 cut(s) 437
HindIII AAGCTT 1 cut(s) 315
HinfI GANTC 6 cut(s) 505, 701, 818, 1152, 1219, 1225
HpaII CCGG 1 cut(s) 191
HphI GGTGA 1 cut(s) 962
Hpy166II GTNNAC 6 cut(s) 64, 178, 437, 886, 1195, 1327
Hpy188I TCNGA 3 cut(s) 304, 555, 1224
Hpy188III TCNNGA 8 cut(s) 347, 368, 389, 502, 569, 932, 1030, 1156
Hpy8I GTNNAC 6 cut(s) 64, 178, 437, 886, 1195, 1327
HpyAV CCTTC 4 cut(s) 153, 177, 607, 1123
HpyCH4III ACNGT 1 cut(s) 631
HpyCH4IV ACGT 1 cut(s) 1237
HpyF10VI GCNNNNNNNGC 3 cut(s) 15, 65, 248
HpyF3I CTNAG 2 cut(s) 1031, 1041
HpySE526I ACGT 1 cut(s) 1237
Hsp92I GRCGYC 1 cut(s) 18
HspAI GCGC 1 cut(s) 712
Kzo9I GATC 7 cut(s) 224, 364, 928, 952, 1183, 1300, 1421
LmnI GCTCC 6 cut(s) 14, 53, 194, 345, 923, 1164
Lsp1109I GCAGC 4 cut(s) 238, 448, 631, 1363
LweI GCATC 6 cut(s) 251, 308, 361, 750, 1012, 1218
MaeI CTAG 1 cut(s) 329
MaeII ACGT 1 cut(s) 1237
MaeIII GTNAC 2 cut(s) 631, 961
MalI GATC 7 cut(s) 226, 366, 930, 954, 1185, 1302, 1423
MbiI CCGCTC 1 cut(s) 48
MboI GATC 7 cut(s) 224, 364, 928, 952, 1183, 1300, 1421
MboII GAAGA 7 cut(s) 138, 374, 482, 529, 992, 1156, 1262
MfeI CAATTG 1 cut(s) 208
MflI RGATCY 2 cut(s) 364, 1421
MhlI GDGCHC 3 cut(s) 654, 1169, 1197
MlsI TGGCCA 1 cut(s) 456
MluCI AATT 7 cut(s) 208, 228, 556, 799, 842, 1047, 1241
MluNI TGGCCA 1 cut(s) 456
MlyI GAGTC 2 cut(s) 812, 1219
Mox20I TGGCCA 1 cut(s) 456
MroXI GAANNNNTTC 2 cut(s) 142, 609
MscI TGGCCA 1 cut(s) 456
MseI TTAA 6 cut(s) 102, 513, 969, 1139, 1200, 1244
MslI CAYNNNNRTG 3 cut(s) 1020, 1200, 1334
Msp20I TGGCCA 1 cut(s) 456
MspI CCGG 1 cut(s) 191
MspR9I CCNGG 8 cut(s) 127, 192, 687, 879, 948, 1067, 1122, 1307
MunI CAATTG 1 cut(s) 208
MvaI CCWGG 7 cut(s) 127, 687, 879, 948, 1067, 1122, 1307
MwoI GCNNNNNNNGC 3 cut(s) 15, 65, 248
NciI CCSGG 1 cut(s) 192
NdeII GATC 7 cut(s) 224, 364, 928, 952, 1183, 1300, 1421
NheI GCTAGC 1 cut(s) 328
NlaIV GGNNCC 4 cut(s) 10, 691, 1006, 1071
NmeAIII GCCGAG 1 cut(s) 1380
NmuCI GTSAC 1 cut(s) 631
NspI RCATGY 3 cut(s) 547, 666, 774
PaeI GCATGC 1 cut(s) 666
PasI CCCWGGG 1 cut(s) 126
PciI ACATGT 2 cut(s) 543, 770
PdmI GAANNNNTTC 2 cut(s) 142, 609
PfeI GAWTC 4 cut(s) 505, 701, 1152, 1219
Pfl23II CGTACG 1 cut(s) 405
PfoI TCCNGGA 1 cut(s) 190
PkrI GCNGC 5 cut(s) 47, 253, 463, 646, 1353
PleI GAGTC 2 cut(s) 812, 1219
PpsI GAGTC 2 cut(s) 812, 1219
PpuMI RGGWCCY 1 cut(s) 1069
PscI ACATGT 2 cut(s) 543, 770
PshBI ATTAAT 1 cut(s) 1244
Psp124BI GAGCTC 1 cut(s) 1169
Psp5II RGGWCCY 1 cut(s) 1069
Psp6I CCWGG 7 cut(s) 125, 685, 877, 946, 1065, 1120, 1305
PspGI CCWGG 7 cut(s) 125, 685, 877, 946, 1065, 1120, 1305
PspLI CGTACG 1 cut(s) 405
PspN4I GGNNCC 4 cut(s) 10, 691, 1006, 1071
PspPI GGNCC 3 cut(s) 749, 1069, 1102
PspPPI RGGWCCY 1 cut(s) 1069
PstI CTGCAG 2 cut(s) 220, 649
PsuI RGATCY 2 cut(s) 364, 1421
RsaI GTAC 5 cut(s) 205, 407, 1095, 1114, 1328
RsaNI GTAC 5 cut(s) 204, 406, 1094, 1113, 1327
RseI CAYNNNNRTG 3 cut(s) 1020, 1200, 1334
SacI GAGCTC 1 cut(s) 1169
SaqAI TTAA 6 cut(s) 102, 513, 969, 1139, 1200, 1244
SatI GCNGC 5 cut(s) 46, 252, 462, 645, 1352
Sau3AI GATC 7 cut(s) 224, 364, 928, 952, 1183, 1300, 1421
Sau96I GGNCC 3 cut(s) 749, 1069, 1102
SchI GAGTC 2 cut(s) 812, 1219
ScrFI CCNGG 8 cut(s) 127, 192, 687, 879, 948, 1067, 1122, 1307
SduI GDGCHC 3 cut(s) 654, 1169, 1197
SfaNI GCATC 6 cut(s) 251, 308, 361, 750, 1012, 1218
SfcI CTRYAG 2 cut(s) 216, 645
SinI GGWCC 3 cut(s) 749, 1069, 1102
SmiMI CAYNNNNRTG 3 cut(s) 1020, 1200, 1334
SphI GCATGC 1 cut(s) 666
Sse9I AATT 7 cut(s) 208, 228, 556, 799, 842, 1047, 1241
SsiI CCGC 4 cut(s) 46, 57, 666, 918
SspMI CTAG 1 cut(s) 329
SstI GAGCTC 1 cut(s) 1169
StyD4I CCNGG 8 cut(s) 125, 190, 685, 877, 946, 1065, 1120, 1305
TaaI ACNGT 1 cut(s) 631
TaiI ACGT 1 cut(s) 1240
TaqI TCGA 2 cut(s) 1248, 1461
TasI AATT 7 cut(s) 208, 228, 556, 799, 842, 1047, 1241
TatI WGTACW 2 cut(s) 1093, 1326
TauI GCSGC 1 cut(s) 48
TfiI GAWTC 4 cut(s) 505, 701, 1152, 1219
Tru1I TTAA 6 cut(s) 102, 513, 969, 1139, 1200, 1244
Tru9I TTAA 6 cut(s) 102, 513, 969, 1139, 1200, 1244
TscAI CASTG 4 cut(s) 112, 225, 654, 1329
TseFI GTSAC 1 cut(s) 631
TseI GCWGC 4 cut(s) 251, 461, 644, 1351
Tsp45I GTSAC 1 cut(s) 631
TspDTI ATGAA 8 cut(s) 221, 589, 727, 866, 909, 1004, 1346, 1454
TspGWI ACGGA 4 cut(s) 498, 539, 983, 1094
TspRI CASTG 4 cut(s) 112, 225, 654, 1329
VneI GTGCAC 1 cut(s) 1193
VpaK11BI GGWCC 3 cut(s) 749, 1069, 1102
VspI ATTAAT 1 cut(s) 1244
XapI RAATTY 2 cut(s) 556, 842
XceI RCATGY 3 cut(s) 547, 666, 774
XmiI GTMKAC 2 cut(s) 63, 885
XmnI GAANNNNTTC 2 cut(s) 142, 609
XspI CTAG 1 cut(s) 329
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.