Chaperone protein DNAj
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G48030 |
| fragaria_vesca | FvH4_2g18630 FvH4_2g18630 FvH4_7g00600 FvH4_7g00600 FvH4_7g00600 |
| malus_domestica | MD02G1316500.v1.1 |
| prunus_persica | Prupe.2G007700_v2.0.a1 |
| pyrus_communis | pycom02g26520 |
| rosa_chinensis | RchiOBHm_Chr1g0314781 RchiOBHm_Chr6g0284191 |
| rosa_laevigata | RLG00000012758 RLG00000030764 |
| rosa_multiflora | Rmu_sc0002833.1_g000038 Rmu_sc0003778.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00331880 Rroxscaffold_7G00184800 |
| rosa_rugosa | Rorug01G0001800 Rorug01G0001800 Rorug06G0161800 |
| rosa_samantha | Rh1AG012700 Rh1BG004300 Rh1CG011200 Rh1DG006000 Rh6AG274600 Rh6BG275100 Rh6CG064000 Rh6CG276800 Rh6DG061100 Rh6DG269400 |
| rosa_wichuraiana | Rw1G000530 Rw6G023620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 213 |
| Acc65I | GGTACC | 1 cut(s) | 998 |
| AccB1I | GGYRCC | 2 cut(s) | 683, 998 |
| AccIII | TCCGGA | 1 cut(s) | 987 |
| AciI | CCGC | 2 cut(s) | 741, 898 |
| AclWI | GGATC | 4 cut(s) | 32, 371, 917, 1154 |
| AcoI | YGGCCR | 2 cut(s) | 466, 544 |
| AcsI | RAATTY | 1 cut(s) | 1247 |
| AcuI | CTGAAG | 1 cut(s) | 1154 |
| AcyI | GRCGYC | 1 cut(s) | 18 |
| AfaI | GTAC | 5 cut(s) | 464, 769, 1000, 1086, 1290 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 750 |
| AgsI | TTSAA | 7 cut(s) | 136, 401, 410, 430, 482, 533, 1195 |
| AjnI | CCWGG | 5 cut(s) | 339, 679, 871, 940, 1114 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 525, 557 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 658, 690 |
| AluBI | AGCT | 7 cut(s) | 209, 352, 602, 638, 656, 920, 1262 |
| AluI | AGCT | 7 cut(s) | 209, 352, 602, 638, 656, 920, 1262 |
| Alw21I | GWGCWC | 2 cut(s) | 676, 1191 |
| Alw26I | GTCTC | 2 cut(s) | 985, 1224 |
| Alw44I | GTGCAC | 1 cut(s) | 1187 |
| AlwI | GGATC | 4 cut(s) | 32, 371, 917, 1154 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 263 |
| Aor13HI | TCCGGA | 1 cut(s) | 987 |
| AoxI | GGCC | 3 cut(s) | 337, 466, 544 |
| ApaLI | GTGCAC | 1 cut(s) | 1187 |
| ApeKI | GCWGC | 5 cut(s) | 209, 263, 638, 1304, 1307 |
| ApoI | RAATTY | 1 cut(s) | 1247 |
| Asp718I | GGTACC | 1 cut(s) | 998 |
| AspLEI | GCGC | 1 cut(s) | 214 |
| AspS9I | GGNCC | 2 cut(s) | 129, 1063 |
| AsuC2I | CCSGG | 1 cut(s) | 510 |
| AsuHPI | GGTGA | 2 cut(s) | 956, 1187 |
| AvaII | GGWCC | 2 cut(s) | 129, 1063 |
| BaeGI | GKGCMC | 1 cut(s) | 1191 |
| BanI | GGYRCC | 2 cut(s) | 683, 998 |
| BbsI | GAAGAC | 2 cut(s) | 540, 981 |
| Bbv12I | GWGCWC | 2 cut(s) | 676, 1191 |
| BbvI | GCAGC | 5 cut(s) | 196, 250, 625, 1291, 1294 |
| BccI | CCATC | 3 cut(s) | 363, 923, 1277 |
| BceAI | ACGGC | 3 cut(s) | 481, 517, 1004 |
| BciT130I | CCWGG | 5 cut(s) | 341, 681, 873, 942, 1116 |
| BclI | TGATCA | 1 cut(s) | 1177 |
| BcnI | CCSGG | 1 cut(s) | 510 |
| BcoDI | GTCTC | 2 cut(s) | 985, 1224 |
| BfmI | CTRYAG | 2 cut(s) | 639, 1308 |
| BisI | GCNGC | 5 cut(s) | 210, 264, 639, 1305, 1308 |
| BlsI | GCNGC | 5 cut(s) | 211, 265, 640, 1306, 1309 |
| Bme1390I | CCNGG | 6 cut(s) | 341, 510, 681, 873, 942, 1116 |
| Bme18I | GGWCC | 2 cut(s) | 129, 1063 |
| BmgT120I | GGNCC | 2 cut(s) | 129, 1063 |
| BmiI | GGNNCC | 4 cut(s) | 10, 685, 1000, 1065 |
| BmrFI | CCNGG | 6 cut(s) | 341, 510, 681, 873, 942, 1116 |
| BmrI | ACTGGG | 2 cut(s) | 150, 974 |
| BmsI | GCATC | 7 cut(s) | 263, 271, 373, 463, 744, 1006, 1212 |
| BmuI | ACTGGG | 2 cut(s) | 150, 974 |
| BpiI | GAAGAC | 2 cut(s) | 540, 981 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1071, 1103 |
| BpmI | CTGGAG | 1 cut(s) | 1098 |
| BpuMI | CCSGG | 1 cut(s) | 510 |
| BsaBI | GATNNNNATC | 1 cut(s) | 933 |
| BsaHI | GRCGYC | 1 cut(s) | 18 |
| BsaJI | CCNNGG | 1 cut(s) | 745 |
| BsaWI | WCCGGW | 1 cut(s) | 987 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 658, 688, 982, 1012 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 750 |
| Bse118I | RCCGGY | 1 cut(s) | 33 |
| Bse1I | ACTGG | 6 cut(s) | 145, 673, 790, 856, 980, 1081 |
| Bse3DI | GCAATG | 2 cut(s) | 499, 826 |
| Bse8I | GATNNNNATC | 1 cut(s) | 933 |
| BseAI | TCCGGA | 1 cut(s) | 987 |
| BseBI | CCWGG | 5 cut(s) | 341, 681, 873, 942, 1116 |
| BseDI | CCNNGG | 1 cut(s) | 745 |
| BseGI | GGATG | 6 cut(s) | 355, 571, 617, 759, 1203, 1288 |
| BseJI | GATNNNNATC | 1 cut(s) | 933 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 750 |
| BseMI | GCAATG | 2 cut(s) | 499, 826 |
| BseMII | CTCAG | 2 cut(s) | 785, 1049 |
| BseNI | ACTGG | 6 cut(s) | 145, 673, 790, 856, 980, 1081 |
| BseRI | GAGGAG | 5 cut(s) | 46, 76, 79, 452, 666 |
| BseSI | GKGCMC | 1 cut(s) | 1191 |
| BseXI | GCAGC | 5 cut(s) | 196, 250, 625, 1291, 1294 |
| BshFI | GGCC | 3 cut(s) | 339, 468, 546 |
| BshNI | GGYRCC | 2 cut(s) | 683, 998 |
| BsiHKAI | GWGCWC | 2 cut(s) | 676, 1191 |
| BsiSI | CCGG | 3 cut(s) | 34, 510, 988 |
| BslFI | GGGAC | 2 cut(s) | 796, 1049 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 750 |
| BsmAI | GTCTC | 2 cut(s) | 985, 1224 |
| BsmFI | GGGAC | 2 cut(s) | 796, 1049 |
| BsnI | GGCC | 3 cut(s) | 339, 468, 546 |
| Bsp1286I | GDGCHC | 2 cut(s) | 676, 1191 |
| Bsp13I | TCCGGA | 1 cut(s) | 987 |
| Bsp143I | GATC | 6 cut(s) | 24, 376, 922, 946, 1146, 1177 |
| BspACI | CCGC | 2 cut(s) | 741, 898 |
| BspANI | GGCC | 3 cut(s) | 339, 468, 546 |
| BspCNI | CTCAG | 2 cut(s) | 784, 1048 |
| BspEI | TCCGGA | 1 cut(s) | 987 |
| BspLI | GGNNCC | 4 cut(s) | 10, 685, 1000, 1065 |
| BspMAI | CTGCAG | 2 cut(s) | 643, 1312 |
| BspPI | GGATC | 4 cut(s) | 32, 371, 917, 1154 |
| BspT107I | GGYRCC | 2 cut(s) | 683, 998 |
| BsrDI | GCAATG | 2 cut(s) | 499, 826 |
| BsrFI | RCCGGY | 1 cut(s) | 33 |
| BsrI | ACTGG | 6 cut(s) | 145, 673, 790, 856, 980, 1081 |
| BssAI | RCCGGY | 1 cut(s) | 33 |
| BssECI | CCNNGG | 1 cut(s) | 745 |
| BssMI | GATC | 6 cut(s) | 24, 376, 922, 946, 1146, 1177 |
| BssNI | GRCGYC | 1 cut(s) | 18 |
| BssT1I | CCWWGG | 1 cut(s) | 745 |
| Bst2UI | CCWGG | 5 cut(s) | 341, 681, 873, 942, 1116 |
| Bst4CI | ACNGT | 4 cut(s) | 101, 232, 625, 914 |
| Bst6I | CTCTTC | 1 cut(s) | 477 |
| BstACI | GRCGYC | 1 cut(s) | 18 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 816 |
| BstC8I | GCNNGC | 3 cut(s) | 7, 39, 1302 |
| BstDEI | CTNAG | 2 cut(s) | 771, 1035 |
| BstF5I | GGATG | 6 cut(s) | 355, 571, 617, 759, 1203, 1288 |
| BstHHI | GCGC | 1 cut(s) | 214 |
| BstKTI | GATC | 6 cut(s) | 27, 379, 925, 949, 1149, 1180 |
| BstMAI | GTCTC | 2 cut(s) | 985, 1224 |
| BstMBI | GATC | 6 cut(s) | 24, 376, 922, 946, 1146, 1177 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 15, 260, 816, 1313 |
| BstNI | CCWGG | 5 cut(s) | 341, 681, 873, 942, 1116 |
| BstSCI | CCNGG | 6 cut(s) | 339, 508, 679, 871, 940, 1114 |
| BstSFI | CTRYAG | 2 cut(s) | 639, 1308 |
| BstSLI | GKGCMC | 1 cut(s) | 1191 |
| BstV1I | GCAGC | 5 cut(s) | 196, 250, 625, 1291, 1294 |
| BstV2I | GAAGAC | 2 cut(s) | 540, 981 |
| BsuRI | GGCC | 3 cut(s) | 339, 468, 546 |
| BtsCI | GGATG | 6 cut(s) | 355, 571, 617, 759, 1203, 1288 |
| BtsIMutI | CAGTG | 5 cut(s) | 138, 237, 264, 779, 1074 |
| Cac8I | GCNNGC | 3 cut(s) | 7, 39, 1302 |
| CaiI | CAGNNNCTG | 1 cut(s) | 263 |
| CfoI | GCGC | 1 cut(s) | 214 |
| Cfr10I | RCCGGY | 1 cut(s) | 33 |
| Cfr13I | GGNCC | 2 cut(s) | 129, 1063 |
| CseI | GACGC | 2 cut(s) | 7, 300 |
| CsiI | ACCWGGT | 2 cut(s) | 940, 1114 |
| Csp6I | GTAC | 5 cut(s) | 463, 768, 999, 1085, 1289 |
| CviAII | CATG | 7 cut(s) | 245, 470, 699, 733, 895, 1010, 1292 |
| CviQI | GTAC | 5 cut(s) | 463, 768, 999, 1085, 1289 |
| DdeI | CTNAG | 2 cut(s) | 771, 1035 |
| DpnI | GATC | 6 cut(s) | 26, 378, 924, 948, 1148, 1179 |
| DpnII | GATC | 6 cut(s) | 24, 376, 922, 946, 1146, 1177 |
| EaeI | YGGCCR | 2 cut(s) | 466, 544 |
| Eam1104I | CTCTTC | 1 cut(s) | 477 |
| EarI | CTCTTC | 1 cut(s) | 477 |
| Eco130I | CCWWGG | 1 cut(s) | 745 |
| Eco32I | GATATC | 1 cut(s) | 588 |
| Eco47I | GGWCC | 2 cut(s) | 129, 1063 |
| Eco57I | CTGAAG | 1 cut(s) | 1154 |
| EcoO109I | RGGNCCY | 2 cut(s) | 129, 1063 |
| EcoRII | CCWGG | 5 cut(s) | 339, 679, 871, 940, 1114 |
| EcoRV | GATATC | 1 cut(s) | 588 |
| EcoT14I | CCWWGG | 1 cut(s) | 745 |
| EcoT22I | ATGCAT | 2 cut(s) | 478, 759 |
| ErhI | CCWWGG | 1 cut(s) | 745 |
| FaeI | CATG | 7 cut(s) | 248, 473, 702, 736, 898, 1013, 1295 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 818, 850 |
| FaqI | GGGAC | 2 cut(s) | 796, 1049 |
| FatI | CATG | 7 cut(s) | 244, 469, 698, 732, 894, 1009, 1291 |
| FauI | CCCGC | 1 cut(s) | 891 |
| FauNDI | CATATG | 1 cut(s) | 759 |
| FbaI | TGATCA | 1 cut(s) | 1177 |
| Fnu4HI | GCNGC | 5 cut(s) | 210, 264, 639, 1305, 1308 |
| FokI | GGATG | 6 cut(s) | 342, 578, 624, 766, 1190, 1295 |
| Fsp4HI | GCNGC | 5 cut(s) | 210, 264, 639, 1305, 1308 |
| FspI | TGCGCA | 1 cut(s) | 213 |
| GlaI | GCGC | 1 cut(s) | 213 |
| GluI | GCNGC | 5 cut(s) | 210, 264, 639, 1305, 1308 |
| GsuI | CTGGAG | 1 cut(s) | 1098 |
| HaeIII | GGCC | 3 cut(s) | 339, 468, 546 |
| HapII | CCGG | 3 cut(s) | 34, 510, 988 |
| HgaI | GACGC | 2 cut(s) | 7, 300 |
| HhaI | GCGC | 1 cut(s) | 214 |
| Hin1I | GRCGYC | 1 cut(s) | 18 |
| Hin1II | CATG | 7 cut(s) | 248, 473, 702, 736, 898, 1013, 1295 |
| Hin6I | GCGC | 1 cut(s) | 212 |
| HinP1I | GCGC | 1 cut(s) | 212 |
| HindIII | AAGCTT | 2 cut(s) | 654, 1260 |
| HinfI | GANTC | 3 cut(s) | 154, 241, 695 |
| HpaII | CCGG | 3 cut(s) | 34, 510, 988 |
| HphI | GGTGA | 2 cut(s) | 956, 1187 |
| Hpy166II | GTNNAC | 3 cut(s) | 31, 560, 1189 |
| Hpy188I | TCNGA | 3 cut(s) | 316, 1122, 1270 |
| Hpy188III | TCNNGA | 9 cut(s) | 22, 359, 380, 401, 799, 926, 988, 1132, 1320 |
| Hpy8I | GTNNAC | 3 cut(s) | 31, 560, 1189 |
| Hpy99I | CGWCG | 2 cut(s) | 48, 316 |
| HpyAV | CCTTC | 3 cut(s) | 142, 1117, 1135 |
| HpyCH4III | ACNGT | 4 cut(s) | 101, 232, 625, 914 |
| HpyCH4IV | ACGT | 2 cut(s) | 691, 1231 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 15, 260, 816, 1313 |
| HpyF3I | CTNAG | 2 cut(s) | 771, 1035 |
| HpySE526I | ACGT | 2 cut(s) | 691, 1231 |
| Hsp92I | GRCGYC | 1 cut(s) | 18 |
| Hsp92II | CATG | 7 cut(s) | 248, 473, 702, 736, 898, 1013, 1295 |
| HspAI | GCGC | 1 cut(s) | 212 |
| Kpn2I | TCCGGA | 1 cut(s) | 987 |
| KpnI | GGTACC | 1 cut(s) | 1002 |
| Ksp22I | TGATCA | 1 cut(s) | 1177 |
| Kzo9I | GATC | 6 cut(s) | 24, 376, 922, 946, 1146, 1177 |
| LmnI | GCTCC | 6 cut(s) | 14, 206, 357, 679, 917, 1313 |
| Lsp1109I | GCAGC | 5 cut(s) | 196, 250, 625, 1291, 1294 |
| LweI | GCATC | 7 cut(s) | 263, 271, 373, 463, 744, 1006, 1212 |
| MabI | ACCWGGT | 2 cut(s) | 940, 1114 |
| MaeII | ACGT | 2 cut(s) | 691, 1231 |
| MaeIII | GTNAC | 2 cut(s) | 908, 955 |
| MalI | GATC | 6 cut(s) | 26, 378, 924, 948, 1148, 1179 |
| MboI | GATC | 6 cut(s) | 24, 376, 922, 946, 1146, 1177 |
| MboII | GAAGA | 8 cut(s) | 494, 545, 986, 1147, 1150, 1257, 1283, 1286 |
| MhlI | GDGCHC | 2 cut(s) | 676, 1191 |
| MluCI | AATT | 5 cut(s) | 193, 220, 576, 629, 1247 |
| MmeI | TCCRAC | 1 cut(s) | 294 |
| Mph1103I | ATGCAT | 2 cut(s) | 478, 759 |
| MroI | TCCGGA | 1 cut(s) | 987 |
| MseI | TTAA | 5 cut(s) | 570, 606, 836, 860, 963 |
| MslI | CAYNNNNRTG | 3 cut(s) | 899, 1014, 1194 |
| MspI | CCGG | 3 cut(s) | 34, 510, 988 |
| MspR9I | CCNGG | 6 cut(s) | 341, 510, 681, 873, 942, 1116 |
| MvaI | CCWGG | 5 cut(s) | 341, 681, 873, 942, 1116 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 15, 260, 816, 1313 |
| NciI | CCSGG | 1 cut(s) | 510 |
| NdeI | CATATG | 1 cut(s) | 759 |
| NdeII | GATC | 6 cut(s) | 24, 376, 922, 946, 1146, 1177 |
| NlaIII | CATG | 7 cut(s) | 248, 473, 702, 736, 898, 1013, 1295 |
| NlaIV | GGNNCC | 4 cut(s) | 10, 685, 1000, 1065 |
| NsbI | TGCGCA | 1 cut(s) | 213 |
| NsiI | ATGCAT | 2 cut(s) | 478, 759 |
| PfeI | GAWTC | 3 cut(s) | 154, 241, 695 |
| PkrI | GCNGC | 5 cut(s) | 211, 265, 640, 1306, 1309 |
| PpuMI | RGGWCCY | 2 cut(s) | 129, 1063 |
| Psp5II | RGGWCCY | 2 cut(s) | 129, 1063 |
| Psp6I | CCWGG | 5 cut(s) | 339, 679, 871, 940, 1114 |
| PspGI | CCWGG | 5 cut(s) | 339, 679, 871, 940, 1114 |
| PspN4I | GGNNCC | 4 cut(s) | 10, 685, 1000, 1065 |
| PspPI | GGNCC | 2 cut(s) | 129, 1063 |
| PspPPI | RGGWCCY | 2 cut(s) | 129, 1063 |
| PstI | CTGCAG | 2 cut(s) | 643, 1312 |
| PstNI | CAGNNNCTG | 1 cut(s) | 263 |
| RsaI | GTAC | 5 cut(s) | 464, 769, 1000, 1086, 1290 |
| RsaNI | GTAC | 5 cut(s) | 463, 768, 999, 1085, 1289 |
| RseI | CAYNNNNRTG | 3 cut(s) | 899, 1014, 1194 |
| SaqAI | TTAA | 5 cut(s) | 570, 606, 836, 860, 963 |
| SatI | GCNGC | 5 cut(s) | 210, 264, 639, 1305, 1308 |
| Sau3AI | GATC | 6 cut(s) | 24, 376, 922, 946, 1146, 1177 |
| Sau96I | GGNCC | 2 cut(s) | 129, 1063 |
| ScrFI | CCNGG | 6 cut(s) | 341, 510, 681, 873, 942, 1116 |
| SduI | GDGCHC | 2 cut(s) | 676, 1191 |
| SexAI | ACCWGGT | 2 cut(s) | 940, 1114 |
| SfaNI | GCATC | 7 cut(s) | 263, 271, 373, 463, 744, 1006, 1212 |
| SfcI | CTRYAG | 2 cut(s) | 639, 1308 |
| SinI | GGWCC | 2 cut(s) | 129, 1063 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 899, 1014, 1194 |
| Sse9I | AATT | 5 cut(s) | 193, 220, 576, 629, 1247 |
| SsiI | CCGC | 2 cut(s) | 741, 898 |
| SspI | AATATT | 1 cut(s) | 1044 |
| StyD4I | CCNGG | 6 cut(s) | 339, 508, 679, 871, 940, 1114 |
| StyI | CCWWGG | 1 cut(s) | 745 |
| TaaI | ACNGT | 4 cut(s) | 101, 232, 625, 914 |
| TaiI | ACGT | 2 cut(s) | 694, 1234 |
| TaqI | TCGA | 3 cut(s) | 239, 634, 1154 |
| TasI | AATT | 5 cut(s) | 193, 220, 576, 629, 1247 |
| TatI | WGTACW | 2 cut(s) | 767, 1084 |
| TfiI | GAWTC | 3 cut(s) | 154, 241, 695 |
| Tru1I | TTAA | 5 cut(s) | 570, 606, 836, 860, 963 |
| Tru9I | TTAA | 5 cut(s) | 570, 606, 836, 860, 963 |
| TscAI | CASTG | 5 cut(s) | 145, 237, 264, 779, 1081 |
| TseI | GCWGC | 5 cut(s) | 209, 263, 638, 1304, 1307 |
| TspDTI | ATGAA | 5 cut(s) | 233, 435, 903, 998, 1158 |
| TspRI | CASTG | 5 cut(s) | 145, 237, 264, 779, 1081 |
| VneI | GTGCAC | 1 cut(s) | 1187 |
| VpaK11BI | GGWCC | 2 cut(s) | 129, 1063 |
| XapI | RAATTY | 1 cut(s) | 1247 |
| Zsp2I | ATGCAT | 2 cut(s) | 478, 759 |