RLG00000012758

Chaperone protein DNAj

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
22086974 .. 22089102
2129 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000012758

Sequence Viewer

Length: 1323 bp
ATGGCTGGCTCCAATGGCGTCAGGATCGTCCACCGGCTCGCCCGTCGCTCTCTCTCCTCCAAAACACTCCTAAACCCTACACCCTCCTCCTCCATATACAGTAGGCTACTTGGAGGTGGTGCTTACAGGACCTTCAACACTGGGCTTTGCAAGAATCATAGGGTTTTAGGAAATCATAATGTTTGTAGTAAGAATTGGTTTCTTGGAGCTGCGCATACTAATTGGACAACAGTGAGGTCGATTCATGGAACTGCATCAGTGGCTGCGAGAGATTACTATGATGCACTTGGCGTGAGCAAGACTGCCAATGCGTCGGAAATAAAGAAAGCCTATTATGGCCTGGCAAAGAAGCTCCATCCAGACACAAATAAAGATGATCCTGATGCCGAAAAGAAGTTTCAAGAAGTTCAAAAGGCTTATGAAGTTTTGAAAGATGAGGAGAAGCGTAGAGAGTATGACGAGTACGGCCATGATGCATTTGAAGAGAGAGGCAATGGCAACGGCTTTCCCGGTGGTTTTGGCAATCCATTTGAAGACTTGTTTGGCCGACAGGGTGGTGGACAGGATGTTAATGTAATTTTGGAGATATCCTTTATGGAAGCTGTTAAGGGATGTGCTAAAACTGTGCAATTTCGAGCTGCAGTTTCCTGTGAAGCTTGTAGTGGAACTGGTGCTCCTCCTGGCACCAAACGTGAATCATGTAAGGGTTGTGGGGGGTTAGGTATGACTTCCATGCAAACCGCCCTTGGTAGGATGCATATGCCTTGTACTCAGTGTAGAGGGACTGGCAAAACTTTCCCGATACTCTGCAACTCTTGCAATGGGAAGCGTGTCTTAAATGGAACGAAGTCAGTCCAGTTAAATATAATGCCAGGAATAGACAACAATGAAACCATGCGGGTGTTCAGTAACGGTGGAGCTGATCCTGATGGAAATCAACCTGGTGATCTTTATGTTACCATTAAGGTTAGGGAAGACCCAGTTTTCCGGAGACAAGGTACCAACATTCATGTAGATGCCGTTATTAGTATCTCTCAGGCAATATTGGGAGGAACTATAAAGGTCCCTACTCTCACTGGAGATGTACTCCTAAAGGTCAGCCCTGCCACGCAACCTGGTCAGAAGGTAGTCCTGAAGAAGAAGGGGATCAAGTCGAGGAACTCTTATTCATTGGGTGATCAATATGTGCACTTCAATGTCAGCATCCCAACAAATCTGTCTCAAAGACAACGTGAAATAATCCAAGAATTTTCCAAAGAAGCTTCTTCCGAAGAAGAACAGGATGGGGTACATGATAAGCGTGCTGCTGCAGGAGCATCTTGA

Protein Analysis

441

Amino Acids

47.66

Weight (kDa)

9.16

Isoelectric Point (pI)

37.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 91 - 153 1.4e-26 DnaJ domain
DnaJ_C PF01556 191 - 403 1.2e-41 DnaJ C terminal domain
DnaJ_CXXCXGXG PF00684 217 - 276 1.3e-09 DnaJ central domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 213
Acc65I GGTACC 1 cut(s) 998
AccB1I GGYRCC 2 cut(s) 683, 998
AccIII TCCGGA 1 cut(s) 987
AciI CCGC 2 cut(s) 741, 898
AclWI GGATC 4 cut(s) 32, 371, 917, 1154
AcoI YGGCCR 2 cut(s) 466, 544
AcsI RAATTY 1 cut(s) 1247
AcuI CTGAAG 1 cut(s) 1154
AcyI GRCGYC 1 cut(s) 18
AfaI GTAC 5 cut(s) 464, 769, 1000, 1086, 1290
AfiI CCNNNNNNNGG 1 cut(s) 750
AgsI TTSAA 7 cut(s) 136, 401, 410, 430, 482, 533, 1195
AjnI CCWGG 5 cut(s) 339, 679, 871, 940, 1114
AjuI GAANNNNNNNTTGG 2 cut(s) 525, 557
AloI GAACNNNNNNTCC 2 cut(s) 658, 690
AluBI AGCT 7 cut(s) 209, 352, 602, 638, 656, 920, 1262
AluI AGCT 7 cut(s) 209, 352, 602, 638, 656, 920, 1262
Alw21I GWGCWC 2 cut(s) 676, 1191
Alw26I GTCTC 2 cut(s) 985, 1224
Alw44I GTGCAC 1 cut(s) 1187
AlwI GGATC 4 cut(s) 32, 371, 917, 1154
AlwNI CAGNNNCTG 1 cut(s) 263
Aor13HI TCCGGA 1 cut(s) 987
AoxI GGCC 3 cut(s) 337, 466, 544
ApaLI GTGCAC 1 cut(s) 1187
ApeKI GCWGC 5 cut(s) 209, 263, 638, 1304, 1307
ApoI RAATTY 1 cut(s) 1247
Asp718I GGTACC 1 cut(s) 998
AspLEI GCGC 1 cut(s) 214
AspS9I GGNCC 2 cut(s) 129, 1063
AsuC2I CCSGG 1 cut(s) 510
AsuHPI GGTGA 2 cut(s) 956, 1187
AvaII GGWCC 2 cut(s) 129, 1063
BaeGI GKGCMC 1 cut(s) 1191
BanI GGYRCC 2 cut(s) 683, 998
BbsI GAAGAC 2 cut(s) 540, 981
Bbv12I GWGCWC 2 cut(s) 676, 1191
BbvI GCAGC 5 cut(s) 196, 250, 625, 1291, 1294
BccI CCATC 3 cut(s) 363, 923, 1277
BceAI ACGGC 3 cut(s) 481, 517, 1004
BciT130I CCWGG 5 cut(s) 341, 681, 873, 942, 1116
BclI TGATCA 1 cut(s) 1177
BcnI CCSGG 1 cut(s) 510
BcoDI GTCTC 2 cut(s) 985, 1224
BfmI CTRYAG 2 cut(s) 639, 1308
BisI GCNGC 5 cut(s) 210, 264, 639, 1305, 1308
BlsI GCNGC 5 cut(s) 211, 265, 640, 1306, 1309
Bme1390I CCNGG 6 cut(s) 341, 510, 681, 873, 942, 1116
Bme18I GGWCC 2 cut(s) 129, 1063
BmgT120I GGNCC 2 cut(s) 129, 1063
BmiI GGNNCC 4 cut(s) 10, 685, 1000, 1065
BmrFI CCNGG 6 cut(s) 341, 510, 681, 873, 942, 1116
BmrI ACTGGG 2 cut(s) 150, 974
BmsI GCATC 7 cut(s) 263, 271, 373, 463, 744, 1006, 1212
BmuI ACTGGG 2 cut(s) 150, 974
BpiI GAAGAC 2 cut(s) 540, 981
BplI GAGNNNNNCTC 2 cut(s) 1071, 1103
BpmI CTGGAG 1 cut(s) 1098
BpuMI CCSGG 1 cut(s) 510
BsaBI GATNNNNATC 1 cut(s) 933
BsaHI GRCGYC 1 cut(s) 18
BsaJI CCNNGG 1 cut(s) 745
BsaWI WCCGGW 1 cut(s) 987
BsaXI ACNNNNNCTCC 4 cut(s) 658, 688, 982, 1012
Bsc4I CCNNNNNNNGG 1 cut(s) 750
Bse118I RCCGGY 1 cut(s) 33
Bse1I ACTGG 6 cut(s) 145, 673, 790, 856, 980, 1081
Bse3DI GCAATG 2 cut(s) 499, 826
Bse8I GATNNNNATC 1 cut(s) 933
BseAI TCCGGA 1 cut(s) 987
BseBI CCWGG 5 cut(s) 341, 681, 873, 942, 1116
BseDI CCNNGG 1 cut(s) 745
BseGI GGATG 6 cut(s) 355, 571, 617, 759, 1203, 1288
BseJI GATNNNNATC 1 cut(s) 933
BseLI CCNNNNNNNGG 1 cut(s) 750
BseMI GCAATG 2 cut(s) 499, 826
BseMII CTCAG 2 cut(s) 785, 1049
BseNI ACTGG 6 cut(s) 145, 673, 790, 856, 980, 1081
BseRI GAGGAG 5 cut(s) 46, 76, 79, 452, 666
BseSI GKGCMC 1 cut(s) 1191
BseXI GCAGC 5 cut(s) 196, 250, 625, 1291, 1294
BshFI GGCC 3 cut(s) 339, 468, 546
BshNI GGYRCC 2 cut(s) 683, 998
BsiHKAI GWGCWC 2 cut(s) 676, 1191
BsiSI CCGG 3 cut(s) 34, 510, 988
BslFI GGGAC 2 cut(s) 796, 1049
BslI CCNNNNNNNGG 1 cut(s) 750
BsmAI GTCTC 2 cut(s) 985, 1224
BsmFI GGGAC 2 cut(s) 796, 1049
BsnI GGCC 3 cut(s) 339, 468, 546
Bsp1286I GDGCHC 2 cut(s) 676, 1191
Bsp13I TCCGGA 1 cut(s) 987
Bsp143I GATC 6 cut(s) 24, 376, 922, 946, 1146, 1177
BspACI CCGC 2 cut(s) 741, 898
BspANI GGCC 3 cut(s) 339, 468, 546
BspCNI CTCAG 2 cut(s) 784, 1048
BspEI TCCGGA 1 cut(s) 987
BspLI GGNNCC 4 cut(s) 10, 685, 1000, 1065
BspMAI CTGCAG 2 cut(s) 643, 1312
BspPI GGATC 4 cut(s) 32, 371, 917, 1154
BspT107I GGYRCC 2 cut(s) 683, 998
BsrDI GCAATG 2 cut(s) 499, 826
BsrFI RCCGGY 1 cut(s) 33
BsrI ACTGG 6 cut(s) 145, 673, 790, 856, 980, 1081
BssAI RCCGGY 1 cut(s) 33
BssECI CCNNGG 1 cut(s) 745
BssMI GATC 6 cut(s) 24, 376, 922, 946, 1146, 1177
BssNI GRCGYC 1 cut(s) 18
BssT1I CCWWGG 1 cut(s) 745
Bst2UI CCWGG 5 cut(s) 341, 681, 873, 942, 1116
Bst4CI ACNGT 4 cut(s) 101, 232, 625, 914
Bst6I CTCTTC 1 cut(s) 477
BstACI GRCGYC 1 cut(s) 18
BstAPI GCANNNNNTGC 1 cut(s) 816
BstC8I GCNNGC 3 cut(s) 7, 39, 1302
BstDEI CTNAG 2 cut(s) 771, 1035
BstF5I GGATG 6 cut(s) 355, 571, 617, 759, 1203, 1288
BstHHI GCGC 1 cut(s) 214
BstKTI GATC 6 cut(s) 27, 379, 925, 949, 1149, 1180
BstMAI GTCTC 2 cut(s) 985, 1224
BstMBI GATC 6 cut(s) 24, 376, 922, 946, 1146, 1177
BstMWI GCNNNNNNNGC 4 cut(s) 15, 260, 816, 1313
BstNI CCWGG 5 cut(s) 341, 681, 873, 942, 1116
BstSCI CCNGG 6 cut(s) 339, 508, 679, 871, 940, 1114
BstSFI CTRYAG 2 cut(s) 639, 1308
BstSLI GKGCMC 1 cut(s) 1191
BstV1I GCAGC 5 cut(s) 196, 250, 625, 1291, 1294
BstV2I GAAGAC 2 cut(s) 540, 981
BsuRI GGCC 3 cut(s) 339, 468, 546
BtsCI GGATG 6 cut(s) 355, 571, 617, 759, 1203, 1288
BtsIMutI CAGTG 5 cut(s) 138, 237, 264, 779, 1074
Cac8I GCNNGC 3 cut(s) 7, 39, 1302
CaiI CAGNNNCTG 1 cut(s) 263
CfoI GCGC 1 cut(s) 214
Cfr10I RCCGGY 1 cut(s) 33
Cfr13I GGNCC 2 cut(s) 129, 1063
CseI GACGC 2 cut(s) 7, 300
CsiI ACCWGGT 2 cut(s) 940, 1114
Csp6I GTAC 5 cut(s) 463, 768, 999, 1085, 1289
CviAII CATG 7 cut(s) 245, 470, 699, 733, 895, 1010, 1292
CviQI GTAC 5 cut(s) 463, 768, 999, 1085, 1289
DdeI CTNAG 2 cut(s) 771, 1035
DpnI GATC 6 cut(s) 26, 378, 924, 948, 1148, 1179
DpnII GATC 6 cut(s) 24, 376, 922, 946, 1146, 1177
EaeI YGGCCR 2 cut(s) 466, 544
Eam1104I CTCTTC 1 cut(s) 477
EarI CTCTTC 1 cut(s) 477
Eco130I CCWWGG 1 cut(s) 745
Eco32I GATATC 1 cut(s) 588
Eco47I GGWCC 2 cut(s) 129, 1063
Eco57I CTGAAG 1 cut(s) 1154
EcoO109I RGGNCCY 2 cut(s) 129, 1063
EcoRII CCWGG 5 cut(s) 339, 679, 871, 940, 1114
EcoRV GATATC 1 cut(s) 588
EcoT14I CCWWGG 1 cut(s) 745
EcoT22I ATGCAT 2 cut(s) 478, 759
ErhI CCWWGG 1 cut(s) 745
FaeI CATG 7 cut(s) 248, 473, 702, 736, 898, 1013, 1295
FalI AAGNNNNNCTT 2 cut(s) 818, 850
FaqI GGGAC 2 cut(s) 796, 1049
FatI CATG 7 cut(s) 244, 469, 698, 732, 894, 1009, 1291
FauI CCCGC 1 cut(s) 891
FauNDI CATATG 1 cut(s) 759
FbaI TGATCA 1 cut(s) 1177
Fnu4HI GCNGC 5 cut(s) 210, 264, 639, 1305, 1308
FokI GGATG 6 cut(s) 342, 578, 624, 766, 1190, 1295
Fsp4HI GCNGC 5 cut(s) 210, 264, 639, 1305, 1308
FspI TGCGCA 1 cut(s) 213
GlaI GCGC 1 cut(s) 213
GluI GCNGC 5 cut(s) 210, 264, 639, 1305, 1308
GsuI CTGGAG 1 cut(s) 1098
HaeIII GGCC 3 cut(s) 339, 468, 546
HapII CCGG 3 cut(s) 34, 510, 988
HgaI GACGC 2 cut(s) 7, 300
HhaI GCGC 1 cut(s) 214
Hin1I GRCGYC 1 cut(s) 18
Hin1II CATG 7 cut(s) 248, 473, 702, 736, 898, 1013, 1295
Hin6I GCGC 1 cut(s) 212
HinP1I GCGC 1 cut(s) 212
HindIII AAGCTT 2 cut(s) 654, 1260
HinfI GANTC 3 cut(s) 154, 241, 695
HpaII CCGG 3 cut(s) 34, 510, 988
HphI GGTGA 2 cut(s) 956, 1187
Hpy166II GTNNAC 3 cut(s) 31, 560, 1189
Hpy188I TCNGA 3 cut(s) 316, 1122, 1270
Hpy188III TCNNGA 9 cut(s) 22, 359, 380, 401, 799, 926, 988, 1132, 1320
Hpy8I GTNNAC 3 cut(s) 31, 560, 1189
Hpy99I CGWCG 2 cut(s) 48, 316
HpyAV CCTTC 3 cut(s) 142, 1117, 1135
HpyCH4III ACNGT 4 cut(s) 101, 232, 625, 914
HpyCH4IV ACGT 2 cut(s) 691, 1231
HpyF10VI GCNNNNNNNGC 4 cut(s) 15, 260, 816, 1313
HpyF3I CTNAG 2 cut(s) 771, 1035
HpySE526I ACGT 2 cut(s) 691, 1231
Hsp92I GRCGYC 1 cut(s) 18
Hsp92II CATG 7 cut(s) 248, 473, 702, 736, 898, 1013, 1295
HspAI GCGC 1 cut(s) 212
Kpn2I TCCGGA 1 cut(s) 987
KpnI GGTACC 1 cut(s) 1002
Ksp22I TGATCA 1 cut(s) 1177
Kzo9I GATC 6 cut(s) 24, 376, 922, 946, 1146, 1177
LmnI GCTCC 6 cut(s) 14, 206, 357, 679, 917, 1313
Lsp1109I GCAGC 5 cut(s) 196, 250, 625, 1291, 1294
LweI GCATC 7 cut(s) 263, 271, 373, 463, 744, 1006, 1212
MabI ACCWGGT 2 cut(s) 940, 1114
MaeII ACGT 2 cut(s) 691, 1231
MaeIII GTNAC 2 cut(s) 908, 955
MalI GATC 6 cut(s) 26, 378, 924, 948, 1148, 1179
MboI GATC 6 cut(s) 24, 376, 922, 946, 1146, 1177
MboII GAAGA 8 cut(s) 494, 545, 986, 1147, 1150, 1257, 1283, 1286
MhlI GDGCHC 2 cut(s) 676, 1191
MluCI AATT 5 cut(s) 193, 220, 576, 629, 1247
MmeI TCCRAC 1 cut(s) 294
Mph1103I ATGCAT 2 cut(s) 478, 759
MroI TCCGGA 1 cut(s) 987
MseI TTAA 5 cut(s) 570, 606, 836, 860, 963
MslI CAYNNNNRTG 3 cut(s) 899, 1014, 1194
MspI CCGG 3 cut(s) 34, 510, 988
MspR9I CCNGG 6 cut(s) 341, 510, 681, 873, 942, 1116
MvaI CCWGG 5 cut(s) 341, 681, 873, 942, 1116
MwoI GCNNNNNNNGC 4 cut(s) 15, 260, 816, 1313
NciI CCSGG 1 cut(s) 510
NdeI CATATG 1 cut(s) 759
NdeII GATC 6 cut(s) 24, 376, 922, 946, 1146, 1177
NlaIII CATG 7 cut(s) 248, 473, 702, 736, 898, 1013, 1295
NlaIV GGNNCC 4 cut(s) 10, 685, 1000, 1065
NsbI TGCGCA 1 cut(s) 213
NsiI ATGCAT 2 cut(s) 478, 759
PfeI GAWTC 3 cut(s) 154, 241, 695
PkrI GCNGC 5 cut(s) 211, 265, 640, 1306, 1309
PpuMI RGGWCCY 2 cut(s) 129, 1063
Psp5II RGGWCCY 2 cut(s) 129, 1063
Psp6I CCWGG 5 cut(s) 339, 679, 871, 940, 1114
PspGI CCWGG 5 cut(s) 339, 679, 871, 940, 1114
PspN4I GGNNCC 4 cut(s) 10, 685, 1000, 1065
PspPI GGNCC 2 cut(s) 129, 1063
PspPPI RGGWCCY 2 cut(s) 129, 1063
PstI CTGCAG 2 cut(s) 643, 1312
PstNI CAGNNNCTG 1 cut(s) 263
RsaI GTAC 5 cut(s) 464, 769, 1000, 1086, 1290
RsaNI GTAC 5 cut(s) 463, 768, 999, 1085, 1289
RseI CAYNNNNRTG 3 cut(s) 899, 1014, 1194
SaqAI TTAA 5 cut(s) 570, 606, 836, 860, 963
SatI GCNGC 5 cut(s) 210, 264, 639, 1305, 1308
Sau3AI GATC 6 cut(s) 24, 376, 922, 946, 1146, 1177
Sau96I GGNCC 2 cut(s) 129, 1063
ScrFI CCNGG 6 cut(s) 341, 510, 681, 873, 942, 1116
SduI GDGCHC 2 cut(s) 676, 1191
SexAI ACCWGGT 2 cut(s) 940, 1114
SfaNI GCATC 7 cut(s) 263, 271, 373, 463, 744, 1006, 1212
SfcI CTRYAG 2 cut(s) 639, 1308
SinI GGWCC 2 cut(s) 129, 1063
SmiMI CAYNNNNRTG 3 cut(s) 899, 1014, 1194
Sse9I AATT 5 cut(s) 193, 220, 576, 629, 1247
SsiI CCGC 2 cut(s) 741, 898
SspI AATATT 1 cut(s) 1044
StyD4I CCNGG 6 cut(s) 339, 508, 679, 871, 940, 1114
StyI CCWWGG 1 cut(s) 745
TaaI ACNGT 4 cut(s) 101, 232, 625, 914
TaiI ACGT 2 cut(s) 694, 1234
TaqI TCGA 3 cut(s) 239, 634, 1154
TasI AATT 5 cut(s) 193, 220, 576, 629, 1247
TatI WGTACW 2 cut(s) 767, 1084
TfiI GAWTC 3 cut(s) 154, 241, 695
Tru1I TTAA 5 cut(s) 570, 606, 836, 860, 963
Tru9I TTAA 5 cut(s) 570, 606, 836, 860, 963
TscAI CASTG 5 cut(s) 145, 237, 264, 779, 1081
TseI GCWGC 5 cut(s) 209, 263, 638, 1304, 1307
TspDTI ATGAA 5 cut(s) 233, 435, 903, 998, 1158
TspRI CASTG 5 cut(s) 145, 237, 264, 779, 1081
VneI GTGCAC 1 cut(s) 1187
VpaK11BI GGWCC 2 cut(s) 129, 1063
XapI RAATTY 1 cut(s) 1247
Zsp2I ATGCAT 2 cut(s) 478, 759
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.