Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0002501

Physical Location & Seq

Genomic Coordinates Forward (+)

4982389 .. 4991663

Gene Structure 9275 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g04410.t7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3189 bp

ATGGATTCCGGTCGCTACGGTCTTCAGCAAGGATGGGATAATAACAGCGCTCCGGAGGGTTATGGTGCAGTTCACGAGCCAAACTTTCGGGTTGGTGGTTCATATGATGAGAGGAGGTTTATAGACGAAAGATACTCAAGGGACAATGTTTATCCAAGAAACACATTCCACCGTGATGCCCTGGATAGGGATAACTACCCACCACCACCTCATGCTGTTGGTGTTGGTATATGGCCACATTCAAGAAGGAGAAGTTATGAAGATGAATTTCCAGTTGATAGGGAACCTAGGAGACATGATAAACAGTTCATGGATTCATATCATGAGATGGATAACCTCCGTGATCACGAGATCGATACATTTCAGGAATTTGATAAATTACGAGATGGCTATCACAGTGTTGACACCTATCGTGATCCTGGGTTTGAGAGGACTTCAAGGATTGGGGGACGTGATCGTGATGATTATGCATATGATGATTTCGACTATAGGTCCGGTATTACCCATAAGACCCGGGGGGACAGTCGTGAGAGAGATTATGACTATGGTCCACATAGTTATGATTCTGATTATGACAGAAGTAGTAGGAGAGAGGGCAGCTGGAGGCGTCGTGAATCTCGTGACCGTGAGCGTGACAAGAAGTGCGTAAGTAGGGAAAGAGAAACAAGTCCATATAGAAGGCATGAGCGTTCTAGATCTCGGTCCCGATCTCGTGGGCATGATGATCGTCCCAGATCAAGATCACCTAGAAGTCGAAGCCATGGCCGAAGTCATCGAGAGGACAGCTATGATGATGGACGGTATGAGAGGACCGATAAACGAAGAGACAGGGATGAGAGACGCCAGAGAGAACATCATTCTGTGGCCCCATCTGCAACTATTGTTGTGAAGGGTCTTTCACAGAAGACTACTGAGGAAGATCTATACCAGATCCTTGCTGAATGGGGACCTCTTCGTCATGTCCGTGTGATCAAAGAACGTAATTCCGGCATTTCCCGTGGATTTGCATTTATTGATTTCCCTTCCGTGGGAGCAGCACGAATTATGATGGACAAACTTGGGGACAATGGGCATGTCGTGGATGGGAGGAAACTTTTTTTTGAGTACAGCAGCAAGCCGACTGGGGGTGCAGGTGGATCTTTTGGCCAGGACAATGCTGGGAAATCTGGCCATGCGAACCATAAAAGCATCACAGTGCCATCTGATTGGATGTGTATTAGCTGTGGATATGTTAATTTTGCACGACGGACATCCTGCTTTCAGTGTAATGAGGCACGAACTGAGGATGCTCCCGCAGCAGATATATCTTTATCCAATCAAATGACAGGAAAGAAAGGATCAGAGGCTGGTCCTACTCATGTTTTGGTTGTTCGTGGACTGGATGAAAATGCTGATGAGGAAATGCTTCGCTATGAGTTTTCTAAACATGCTCCTATCAAGGATCTTCGTCTTGTCAGAGACAAATTCACTCATGTTTCACGGGGATTTGCGTTTGTGCATTTCCATTCGGTGGAAGATGCTACAAAAGCTCTTGAAGCAACAAATGGAACACCACTTGAAAGGAATGGGCAGATTTTAAGAGTAGCATATGCAAAAAGCATTCTTGGTCCAGGATCAGGCATGTCGGGAACTTCACAGTCAAGCAGCTTGGCAGCTGCTGCAATTGAGGCAGCAACATTTGCTCAACAGTATGATGCTGTTGGATGGGCACCAAAGGAATATAATCCAGATGACAAACAATCCACGGGAGGGAAGGAGCAAAGTGGTGGGGACTTGAAACTACAAAATGATGGTTTGGCGCCACAATCTGGTTTTGTATGGGATGAGGCATCCGGTTACTACTACGACGCCTCTTCCGGGTTCTACTATGACGGAAATACAGGTCTTTATTATGACGGTAACAACGGGATTTGGTATTCTTATGATCACCAAACTCTGCAATACATCCCTTGCACTGATCAGAATGGCATCAAAGAATCTGCTAATCAATCTCAGCTTTCGAAGGCTTCAGATGGTTCAAGTGTAAAAAAAGTAGTCATCTCTGCACCGGCTACAACCTCAGCTGCATCGCTACCCGATGCAGTCCAGGCTGCTGCAACAGCAGCAATAGCTGCAGAGAAAAAAGAAAAGGAAAAGTCCAAAGAGATCAAGTTGGCTTCAAAGAGCAGTATTTTGGCTAACAAGAAGAAAATGAGTAATGTATTGACCATGTGGAAACAGAGGAGTCATGAAGGGCAAGTAACTCGTGTAGCTCTGGATGATAACCAGCAAAGTGCACCAGCCATAGATAGACCTGTTTCTTCTGTTCCATCTACAAAGACAAAGTCTAAAATTGATGTGCCAACCAAAAATGAGAATACTATGTTGACTTCAGGGGTTACTGCCACTGTTACTACTGCAGATACTCTCAGTTTAGAGTCTTCAGTCATGCCAAGGCCTGTGAGCAACAGTATAGGGGGGACACTAAGGGGAGTGATAAGGGGATCTGGAAGAACTGTGGTTAAATCAGATACATCCCTTTCAGCATCTGGCGGAGTTTCCACACCTTCAACTTCTGCTGCATTCATAGCAGGTTCTTCTGCACCAACAGATGCAGATATCTCTCCAGCTTTGACACCCTTCAGAACTGATGCATCTGCATTAGGTTCTTATACACCACCTGTGGGTGCTGGGAGTGGCAGGAGACGATTTTCCGAAATGCCAGCTTCTGCTCATAAAGAACCTCAAACTGGATACAGGGATCGTGCTGCTGAAAGGAGGAGCTTGTATGGCTCGTCATCTTCTTTTGGAGATGATTTGCCTGAACATGGTTTTGGGGAGTCAAGTCGAGACTTGGCATTGAGGAAGGGTTCTTTTGATTCAATGCCTTTCCCCCCTGGTGTTGGTGGAGGACGTGCTACTGGAGATGCTGCCATTGACAGTTACGAGGTAATTACAGCCGATAAAGCTATTGATGAGAGCAATGTGGGCAACAAGATGCTTCGCAGCATGGGCTGGCACGAAGGCTTGGGTTTAGGGAGAGATGGGAGTGGAATGGTAGAACCGGTGCAGGCTCAGAGTGTGGAAAGGAGAGCCGGACTTGGGAGTCAACAGAAGAAGTTAGATCCTGCCCTCGAGGCTCAGGCTGGAGATAGTTATAAAACTCTCATTCACAAGAAGGCACTGGCTAGGTTCCGGGAGATGTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000381 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0010468 GO:0010941 GO:0010942 GO:0016043 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0022607 GO:0022613 GO:0022618 GO:0031323 GO:0034622 GO:0034641 GO:0042981 GO:0043065 GO:0043067 GO:0043068 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048024 GO:0048518 GO:0048522 GO:0050684 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065003 GO:0065007 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1903311

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

G-patch RRM_1

Protein Analysis

1063

Amino Acids

117.37

Weight (kDa)

8.19

Isoelectric Point (pI)

54.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	294 - 364	1.7e-11	RNA recognition motif
RRM_1	PF00076	455 - 520	2.7e-17	RNA recognition motif
OCRE	PF17780	601 - 650	8e-18	OCRE domain
G-patch	PF01585	987 - 1028	3.7e-14	G-patch domain
G-patch_2	PF12656	987 - 1032	1.4e-06	G-patch domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0002501)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54230 AT3G54230 AT3G54230 AT3G54230 AT3G54230
fragaria_vesca	FvH4_7g04410 FvH4_7g04410 FvH4_7g04410 FvH4_7g04410 FvH4_7g04410 FvH4_7g04410 FvH4_7g04410 FvH4_7g04410
malus_domestica	MD00G1152000.v1.1 MD02G1270000.v1.1
prunus_persica	Prupe.2G049800_v2.0.a1 Prupe.2G049800_v2.0.a1 Prupe.2G049800_v2.0.a1 Prupe.2G049800_v2.0.a1 Prupe.2G049800_v2.0.a1 Prupe.2G049800_v2.0.a1 Prupe.2G049800_v2.0.a1 Prupe.2G049800_v2.0.a1 Prupe.2G049800_v2.0.a1 Prupe.2G049800_v2.0.a1 Prupe.2G049800_v2.0.a1
pyrus_communis	pycom02g23120 pycom07g03700
rosa_chinensis	RchiOBHm_Chr1g0329501
rosa_laevigata	RLG00000029881
rosa_multiflora	Rmu_sc0004805.1_g000032 Rmu_sc0016170.1_g000004
rosa_roxburghii	Rroxscaffold_4G00321020
rosa_rugosa	Rorug01G0081000 Rorug01G0081100
rosa_samantha	Rh1AG099500 Rh1BG079200 Rh1CG095400 Rh1DG103200
rosa_wichuraiana	Rw0G014300 Rw1G007750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	3138
AarI	CACCTGC	1 cut(s)	1121
AasI	GACNNNNNNGTC	2 cut(s)	954, 3084
AbsI	CCTCGAGG	1 cut(s)	3113
Acc36I	ACCTGC	2 cut(s)	1121, 2561
AccB1I	GGYRCC	2 cut(s)	1708, 1798
AccB7I	CCANNNNNTGG	2 cut(s)	1510, 1808
AccIII	TCCGGA	1 cut(s)	52
AciI	CCGC	2 cut(s)	1293, 2532
AclWI	GGATC	9 cut(s)	410, 925, 1144, 1345, 1449, 1621, 2491, 2748, 3098
AcoI	YGGCCR	4 cut(s)	233, 763, 1144, 1168
AcsI	RAATTY	3 cut(s)	266, 368, 1463
AcuI	CTGAAG	5 cut(s)	8, 1992, 2355, 2406, 2605
AcyI	GRCGYC	4 cut(s)	607, 841, 1799, 1848
AfaI	GTAC	1 cut(s)	1106
AfeI	AGCGCT	1 cut(s)	49
AgeI	ACCGGT	1 cut(s)	3043
AgsI	TTSAA	9 cut(s)	243, 438, 1535, 1559, 1777, 2019, 2160, 2550, 2862
AhdI	GACNNNNNGTC	1 cut(s)	490
AjiI	CACGTC	2 cut(s)	452, 2894
AjnI	CCWGG	6 cut(s)	180, 418, 1146, 1609, 2085, 2875
AjuI	GAANNNNNNNTTGG	2 cut(s)	2796, 2828
Alw21I	GWGCWC	1 cut(s)	2278
Alw26I	GTCTC	6 cut(s)	286, 819, 832, 1452, 2677, 2823
Alw44I	GTGCAC	1 cut(s)	2274
AlwI	GGATC	9 cut(s)	410, 925, 1144, 1345, 1449, 1621, 2491, 2748, 3098
AlwNI	CAGNNNCTG	4 cut(s)	1346, 1658, 2528, 2708
Ama87I	CYCGRG	2 cut(s)	513, 3113
Aor13HI	TCCGGA	1 cut(s)	52
Aor51HI	AGCGCT	1 cut(s)	49
AoxI	GGCC	6 cut(s)	233, 763, 864, 1144, 1168, 2435
ApaLI	GTGCAC	1 cut(s)	2274
ApoI	RAATTY	3 cut(s)	266, 368, 1463
ArsI	GACNNNNNNTTYG	2 cut(s)	2309, 2341
AsiGI	ACCGGT	1 cut(s)	3043
Asp700I	GAANNNNTTC	1 cut(s)	1404
AspA2I	CCTAGG	1 cut(s)	287
AspLEI	GCGC	2 cut(s)	50, 1801
AspS9I	GGNCC	8 cut(s)	492, 548, 702, 810, 865, 947, 1349, 1607
AsuC2I	CCSGG	4 cut(s)	514, 515, 1858, 3176
AsuHPI	GGTGA	2 cut(s)	735, 1919
AsuII	TTCGAA	1 cut(s)	2000
AvaI	CYCGRG	2 cut(s)	513, 3113
AvaII	GGWCC	7 cut(s)	492, 548, 702, 810, 947, 1349, 1607
AvrII	CCTAGG	1 cut(s)	287
BaeGI	GKGCMC	2 cut(s)	1711, 2278
BalI	TGGCCA	3 cut(s)	235, 1146, 1170
BanI	GGYRCC	2 cut(s)	1708, 1798
BauI	CACGAG	5 cut(s)	74, 347, 618, 711, 2244
BbsI	GAAGAC	3 cut(s)	14, 911, 2412
Bbv12I	GWGCWC	1 cut(s)	2278
BbvCI	CCTCAGC	1 cut(s)	2059
BcgI	CGANNNNNNTGC	4 cut(s)	707, 741, 2225, 2259
BciT130I	CCWGG	6 cut(s)	182, 420, 1148, 1611, 2087, 2877
BciVI	GTATCC	1 cut(s)	2726
BclI	TGATCA	4 cut(s)	343, 969, 1924, 1957
BcnI	CCSGG	4 cut(s)	514, 515, 1858, 3176
BcoDI	GTCTC	6 cut(s)	286, 819, 832, 1452, 2677, 2823
BfaI	CTAG	4 cut(s)	288, 693, 747, 3168
BfmI	CTRYAG	3 cut(s)	487, 2112, 2397
BfoI	RGCGCY	2 cut(s)	51, 1802
BfuAI	ACCTGC	2 cut(s)	1121, 2561
BfuI	GTATCC	1 cut(s)	2726
BglI	GCCNNNNNGGC	1 cut(s)	3116
BglII	AGATCT	2 cut(s)	695, 919
BlnI	CCTAGG	1 cut(s)	287
Bme18I	GGWCC	7 cut(s)	492, 548, 702, 810, 947, 1349, 1607
BmeRI	GACNNNNNGTC	1 cut(s)	490
BmeT110I	CYCGRG	2 cut(s)	513, 3113
BmgBI	CACGTC	2 cut(s)	452, 2894
BmgT120I	GGNCC	8 cut(s)	492, 548, 702, 810, 865, 947, 1349, 1607
BmiI	GGNNCC	7 cut(s)	285, 704, 867, 948, 1710, 1800, 3173
BmrI	ACTGGG	1 cut(s)	1131
BmuI	ACTGGG	1 cut(s)	1131
BoxI	GACNNNNGTC	1 cut(s)	546
BpiI	GAAGAC	3 cut(s)	14, 911, 2412
BpmI	CTGGAG	4 cut(s)	622, 2589, 2922, 3147
Bpu10I	CCTNAGC	2 cut(s)	2059, 3120
Bpu14I	TTCGAA	1 cut(s)	2000
BpuEI	CTTGAG	1 cut(s)	121
BpuMI	CCSGG	4 cut(s)	514, 515, 1858, 3176
Bsa29I	ATCGAT	1 cut(s)	354
BsaBI	GATNNNNATC	3 cut(s)	318, 390, 739
BsaHI	GRCGYC	4 cut(s)	607, 841, 1799, 1848
BsaWI	WCCGGW	5 cut(s)	8, 52, 494, 1832, 3043
BsaXI	ACNNNNNCTCC	2 cut(s)	595, 625
Bse118I	RCCGGY	2 cut(s)	2047, 3043
Bse1I	ACTGG	6 cut(s)	272, 1126, 1383, 2734, 2905, 3168
Bse3DI	GCAATG	1 cut(s)	2968
Bse8I	GATNNNNATC	3 cut(s)	318, 390, 739
BseAI	TCCGGA	1 cut(s)	52
BseBI	CCWGG	6 cut(s)	182, 420, 1148, 1611, 2087, 2877
BseCI	ATCGAT	1 cut(s)	354
BseJI	GATNNNNATC	3 cut(s)	318, 390, 739
BseMI	GCAATG	1 cut(s)	2968
BseMII	CTCAG	7 cut(s)	903, 1272, 2006, 2073, 2422, 3068, 3134
BseNI	ACTGG	6 cut(s)	272, 1126, 1383, 2734, 2905, 3168
BseRI	GAGGAG	3 cut(s)	127, 2236, 2773
BseSI	GKGCMC	2 cut(s)	1711, 2278
BseYI	CCCAGC	2 cut(s)	1157, 2669
BsgI	GTGCAG	5 cut(s)	87, 1149, 2028, 2565, 3068
Bsh1285I	CGRYCG	1 cut(s)	13
BshFI	GGCC	6 cut(s)	235, 765, 866, 1146, 1170, 2437
BshNI	GGYRCC	2 cut(s)	1708, 1798
BshTI	ACCGGT	1 cut(s)	3043
BshVI	ATCGAT	1 cut(s)	354
BsiEI	CGRYCG	1 cut(s)	13
BsiHKAI	GWGCWC	1 cut(s)	2278
BsiHKCI	CYCGRG	2 cut(s)	513, 3113
BslFI	GGGAC	9 cut(s)	155, 462, 533, 688, 714, 960, 1076, 1784, 2473
BsmAI	GTCTC	6 cut(s)	286, 819, 832, 1452, 2677, 2823
BsmBI	CGTCTC	2 cut(s)	832, 2677
BsmFI	GGGAC	9 cut(s)	155, 462, 533, 688, 714, 960, 1076, 1784, 2473
BsmI	GAATGC	2 cut(s)	1599, 2561
BsnI	GGCC	6 cut(s)	235, 765, 866, 1146, 1170, 2437
BsoBI	CYCGRG	2 cut(s)	513, 3113
Bsp119I	TTCGAA	1 cut(s)	2000
Bsp1286I	GDGCHC	2 cut(s)	1711, 2278
Bsp13I	TCCGGA	1 cut(s)	52
Bsp19I	CCATGG	1 cut(s)	760
BspACI	CCGC	2 cut(s)	1293, 2532
BspANI	GGCC	6 cut(s)	235, 765, 866, 1146, 1170, 2437
BspCNI	CTCAG	7 cut(s)	904, 1273, 2005, 2072, 2421, 3067, 3133
BspDI	ATCGAT	1 cut(s)	354
BspEI	TCCGGA	1 cut(s)	52
BspHI	TCATGA	2 cut(s)	322, 2227
BspLI	GGNNCC	7 cut(s)	285, 704, 867, 948, 1710, 1800, 3173
BspMAI	CTGCAG	2 cut(s)	2116, 2401
BspMI	ACCTGC	2 cut(s)	1121, 2561
BspPI	GGATC	9 cut(s)	410, 925, 1144, 1345, 1449, 1621, 2491, 2748, 3098
BspT104I	TTCGAA	1 cut(s)	2000
BspT107I	GGYRCC	2 cut(s)	1708, 1798
BsrDI	GCAATG	1 cut(s)	2968
BsrFI	RCCGGY	2 cut(s)	2047, 3043
BsrI	ACTGG	6 cut(s)	272, 1126, 1383, 2734, 2905, 3168
BssAI	RCCGGY	2 cut(s)	2047, 3043
BssNI	GRCGYC	4 cut(s)	607, 841, 1799, 1848
BssSI	CACGAG	5 cut(s)	74, 347, 618, 711, 2244
BssT1I	CCWWGG	3 cut(s)	287, 760, 2432
Bst2BI	CACGAG	5 cut(s)	74, 347, 618, 711, 2244
Bst2UI	CCWGG	6 cut(s)	182, 420, 1148, 1611, 2087, 2877
Bst6I	CTCTTC	3 cut(s)	817, 957, 1858
BstACI	GRCGYC	4 cut(s)	607, 841, 1799, 1848
BstAPI	GCANNNNNTGC	3 cut(s)	1658, 1679, 2111
BstBI	TTCGAA	1 cut(s)	2000
BstC8I	GCNNGC	4 cut(s)	1115, 2703, 2996, 3051
BstDEI	CTNAG	9 cut(s)	912, 1281, 1992, 2059, 2408, 2465, 3054, 3120, 3186
BstDSI	CCRYGG	4 cut(s)	760, 997, 1026, 1743
BstH2I	RGCGCY	2 cut(s)	51, 1802
BstHHI	GCGC	2 cut(s)	50, 1801
BstMAI	GTCTC	6 cut(s)	286, 819, 832, 1452, 2677, 2823
BstMCI	CGRYCG	1 cut(s)	13
BstNI	CCWGG	6 cut(s)	182, 420, 1148, 1611, 2087, 2877
BstNSI	RCATGY	3 cut(s)	1076, 1430, 1624
BstPAI	GACNNNNGTC	1 cut(s)	546
BstSFI	CTRYAG	3 cut(s)	487, 2112, 2397
BstSLI	GKGCMC	2 cut(s)	1711, 2278
BstV2I	GAAGAC	3 cut(s)	14, 911, 2412
BstX2I	RGATCY	7 cut(s)	695, 919, 930, 1136, 1441, 2483, 3103
BstXI	CCANNNNNNTGG	1 cut(s)	1206
BstYI	RGATCY	7 cut(s)	695, 919, 930, 1136, 1441, 2483, 3103
Bsu15I	ATCGAT	1 cut(s)	354
BsuI	GTATCC	1 cut(s)	2726
BsuRI	GGCC	6 cut(s)	235, 765, 866, 1146, 1170, 2437
BsuTUI	ATCGAT	1 cut(s)	354
BtgI	CCRYGG	4 cut(s)	760, 997, 1026, 1743
BtgZI	GCGATG	1 cut(s)	2052
BtrI	CACGTC	2 cut(s)	452, 2894
BtsIMutI	CAGTG	6 cut(s)	403, 1200, 1268, 1953, 2385, 3161
BveI	ACCTGC	2 cut(s)	1121, 2561
Cac8I	GCNNGC	4 cut(s)	1115, 2703, 2996, 3051
CaiI	CAGNNNCTG	4 cut(s)	1346, 1658, 2528, 2708
CciI	TCATGA	2 cut(s)	322, 2227
CfoI	GCGC	2 cut(s)	50, 1801
Cfr10I	RCCGGY	2 cut(s)	2047, 3043
Cfr13I	GGNCC	8 cut(s)	492, 548, 702, 810, 865, 947, 1349, 1607
Cfr9I	CCCGGG	1 cut(s)	513
ClaI	ATCGAT	1 cut(s)	354
CseI	GACGC	3 cut(s)	596, 849, 1856
Csp6I	GTAC	1 cut(s)	1105
CspAI	ACCGGT	1 cut(s)	3043
CviQI	GTAC	1 cut(s)	1105
DdeI	CTNAG	9 cut(s)	912, 1281, 1992, 2059, 2408, 2465, 3054, 3120, 3186
DinI	GGCGCC	1 cut(s)	1800
DrdI	GACNNNNNNGTC	2 cut(s)	954, 3084
DriI	GACNNNNNGTC	1 cut(s)	490
DseDI	GACNNNNNNGTC	2 cut(s)	954, 3084
EaeI	YGGCCR	4 cut(s)	233, 763, 1144, 1168
Eam1104I	CTCTTC	3 cut(s)	817, 957, 1858
Eam1105I	GACNNNNNGTC	1 cut(s)	490
EarI	CTCTTC	3 cut(s)	817, 957, 1858
EciI	GGCGGA	1 cut(s)	2547
Eco130I	CCWWGG	3 cut(s)	287, 760, 2432
Eco147I	AGGCCT	1 cut(s)	2437
Eco32I	GATATC	1 cut(s)	2599
Eco47I	GGWCC	7 cut(s)	492, 548, 702, 810, 947, 1349, 1607
Eco47III	AGCGCT	1 cut(s)	49
Eco57I	CTGAAG	5 cut(s)	8, 1992, 2355, 2406, 2605
Eco88I	CYCGRG	2 cut(s)	513, 3113
EcoO109I	RGGNCCY	1 cut(s)	947
EcoRII	CCWGG	6 cut(s)	180, 418, 1146, 1609, 2085, 2875
EcoRV	GATATC	1 cut(s)	2599
EcoT14I	CCWWGG	3 cut(s)	287, 760, 2432
EcoT22I	ATGCAT	2 cut(s)	472, 2635
EgeI	GGCGCC	1 cut(s)	1800
EheI	GGCGCC	1 cut(s)	1800
ErhI	CCWWGG	3 cut(s)	287, 760, 2432
Esp3I	CGTCTC	2 cut(s)	832, 2677
FaqI	GGGAC	9 cut(s)	155, 462, 533, 688, 714, 960, 1076, 1784, 2473
FauI	CCCGC	1 cut(s)	1300
FauNDI	CATATG	3 cut(s)	103, 472, 1588
FbaI	TGATCA	4 cut(s)	343, 969, 1924, 1957
FspBI	CTAG	4 cut(s)	288, 693, 747, 3168
GlaI	GCGC	2 cut(s)	49, 1800
GsaI	CCCAGC	2 cut(s)	1161, 2673
GsuI	CTGGAG	4 cut(s)	622, 2589, 2922, 3147
HaeII	RGCGCY	2 cut(s)	51, 1802
HaeIII	GGCC	6 cut(s)	235, 765, 866, 1146, 1170, 2437
HgaI	GACGC	3 cut(s)	596, 849, 1856
HhaI	GCGC	2 cut(s)	50, 1801
Hin1I	GRCGYC	4 cut(s)	607, 841, 1799, 1848
Hin6I	GCGC	2 cut(s)	48, 1799
HinP1I	GCGC	2 cut(s)	48, 1799
HincII	GTYRAC	3 cut(s)	403, 2367, 3089
HindII	GTYRAC	3 cut(s)	403, 2367, 3089
HphI	GGTGA	2 cut(s)	735, 1919
Hpy166II	GTNNAC	7 cut(s)	73, 403, 551, 1376, 2276, 2367, 3089
Hpy8I	GTNNAC	7 cut(s)	73, 403, 551, 1376, 2276, 2367, 3089
Hpy99I	CGWCG	3 cut(s)	612, 1248, 1850
HpyCH4IV	ACGT	3 cut(s)	451, 979, 2893
HpyF3I	CTNAG	9 cut(s)	912, 1281, 1992, 2059, 2408, 2465, 3054, 3120, 3186
HpySE526I	ACGT	3 cut(s)	451, 979, 2893
Hsp92I	GRCGYC	4 cut(s)	607, 841, 1799, 1848
HspAI	GCGC	2 cut(s)	48, 1799
KasI	GGCGCC	1 cut(s)	1798
Kpn2I	TCCGGA	1 cut(s)	52
Ksp22I	TGATCA	4 cut(s)	343, 969, 1924, 1957
LmnI	GCTCC	6 cut(s)	55, 1031, 1294, 1435, 1756, 2760
MaeI	CTAG	4 cut(s)	288, 693, 747, 3168
MaeII	ACGT	3 cut(s)	451, 979, 2893
MaeIII	GTNAC	8 cut(s)	620, 632, 1835, 1898, 2239, 2377, 2389, 2921
MfeI	CAATTG	1 cut(s)	1662
MflI	RGATCY	7 cut(s)	695, 919, 930, 1136, 1441, 2483, 3103
MhlI	GDGCHC	2 cut(s)	1711, 2278
MlsI	TGGCCA	3 cut(s)	235, 1146, 1170
MluNI	TGGCCA	3 cut(s)	235, 1146, 1170
Mly113I	GGCGCC	1 cut(s)	1799
MlyI	GAGTC	4 cut(s)	2233, 2426, 2828, 3094
MmeI	TCCRAC	1 cut(s)	1681
Mox20I	TGGCCA	3 cut(s)	235, 1146, 1170
Mph1103I	ATGCAT	2 cut(s)	472, 2635
MroI	TCCGGA	1 cut(s)	52
MroXI	GAANNNNTTC	1 cut(s)	1404
MscI	TGGCCA	3 cut(s)	235, 1146, 1170
MseI	TTAA	3 cut(s)	1233, 1577, 2502
MslI	CAYNNNNRTG	4 cut(s)	174, 558, 963, 1193
Msp20I	TGGCCA	3 cut(s)	235, 1146, 1170
MspA1I	CMGCKG	3 cut(s)	600, 1655, 2063
MunI	CAATTG	1 cut(s)	1662
Mva1269I	GAATGC	2 cut(s)	1599, 2561
MvaI	CCWGG	6 cut(s)	182, 420, 1148, 1611, 2087, 2877
NarI	GGCGCC	1 cut(s)	1799
NciI	CCSGG	4 cut(s)	514, 515, 1858, 3176
NcoI	CCATGG	1 cut(s)	760
NdeI	CATATG	3 cut(s)	103, 472, 1588
NlaIV	GGNNCC	7 cut(s)	285, 704, 867, 948, 1710, 1800, 3173
NmuCI	GTSAC	2 cut(s)	620, 632
NsiI	ATGCAT	2 cut(s)	472, 2635
NspI	RCATGY	3 cut(s)	1076, 1430, 1624
NspV	TTCGAA	1 cut(s)	2000
PaeR7I	CTCGAG	1 cut(s)	3113
PagI	TCATGA	2 cut(s)	322, 2227
PaqCI	CACCTGC	1 cut(s)	1121
PceI	AGGCCT	1 cut(s)	2437
PcsI	WCGNNNNNNNCGW	2 cut(s)	616, 961
PctI	GAATGC	2 cut(s)	1599, 2561
PdmI	GAANNNNTTC	1 cut(s)	1404
PfeI	GAWTC	6 cut(s)	5, 314, 563, 614, 1976, 2858
PflFI	GACNNNGTC	1 cut(s)	2323
PflMI	CCANNNNNTGG	2 cut(s)	1510, 1808
PfoI	TCCNGGA	2 cut(s)	1609, 3174
PinAI	ACCGGT	1 cut(s)	3043
PleI	GAGTC	4 cut(s)	2232, 2425, 2827, 3093
PluTI	GGCGCC	1 cut(s)	1802
PpsI	GAGTC	4 cut(s)	2232, 2425, 2827, 3093
PpuMI	RGGWCCY	1 cut(s)	947
PshAI	GACNNNNGTC	1 cut(s)	546
PsiI	TTATAA	1 cut(s)	3138
Psp5II	RGGWCCY	1 cut(s)	947
Psp6I	CCWGG	6 cut(s)	180, 418, 1146, 1609, 2085, 2875
PspFI	CCCAGC	2 cut(s)	1157, 2669
PspGI	CCWGG	6 cut(s)	180, 418, 1146, 1609, 2085, 2875
PspN4I	GGNNCC	7 cut(s)	285, 704, 867, 948, 1710, 1800, 3173
PspPI	GGNCC	8 cut(s)	492, 548, 702, 810, 865, 947, 1349, 1607
PspPPI	RGGWCCY	1 cut(s)	947
PspXI	VCTCGAGB	1 cut(s)	3113
PstI	CTGCAG	2 cut(s)	2116, 2401
PstNI	CAGNNNCTG	4 cut(s)	1346, 1658, 2528, 2708
PsuI	RGATCY	7 cut(s)	695, 919, 930, 1136, 1441, 2483, 3103
PsyI	GACNNNGTC	1 cut(s)	2323
PvuII	CAGCTG	3 cut(s)	600, 1655, 2063
RsaI	GTAC	1 cut(s)	1106
RsaNI	GTAC	1 cut(s)	1105
RseI	CAYNNNNRTG	4 cut(s)	174, 558, 963, 1193
SaqAI	TTAA	3 cut(s)	1233, 1577, 2502
Sau96I	GGNCC	8 cut(s)	492, 548, 702, 810, 865, 947, 1349, 1607
SchI	GAGTC	4 cut(s)	2233, 2426, 2828, 3094
SduI	GDGCHC	2 cut(s)	1711, 2278
SfcI	CTRYAG	3 cut(s)	487, 2112, 2397
SfoI	GGCGCC	1 cut(s)	1800
Sfr274I	CTCGAG	1 cut(s)	3113
SfuI	TTCGAA	1 cut(s)	2000
SinI	GGWCC	7 cut(s)	492, 548, 702, 810, 947, 1349, 1607
SlaI	CTCGAG	1 cut(s)	3113
SmaI	CCCGGG	1 cut(s)	515
SmiMI	CAYNNNNRTG	4 cut(s)	174, 558, 963, 1193
SmlI	CTYRAG	2 cut(s)	136, 3113
SmoI	CTYRAG	2 cut(s)	136, 3113
SseBI	AGGCCT	1 cut(s)	2437
SsiI	CCGC	2 cut(s)	1293, 2532
SspDI	GGCGCC	1 cut(s)	1798
SspMI	CTAG	4 cut(s)	288, 693, 747, 3168
StuI	AGGCCT	1 cut(s)	2437
StyI	CCWWGG	3 cut(s)	287, 760, 2432
TaiI	ACGT	3 cut(s)	454, 982, 2896
TaqI	TCGA	7 cut(s)	354, 483, 754, 775, 2000, 2827, 3114
TaqII	GACCGA	2 cut(s)	690, 827
TatI	WGTACW	1 cut(s)	1104
TfiI	GAWTC	6 cut(s)	5, 314, 563, 614, 1976, 2858
Tru1I	TTAA	3 cut(s)	1233, 1577, 2502
Tru9I	TTAA	3 cut(s)	1233, 1577, 2502
TscAI	CASTG	6 cut(s)	403, 1200, 1268, 1960, 2392, 3168
TseFI	GTSAC	2 cut(s)	620, 632
Tsp45I	GTSAC	2 cut(s)	620, 632
TspDTI	ATGAA	8 cut(s)	90, 273, 279, 298, 306, 1398, 2244, 2554
TspGWI	ACGGA	5 cut(s)	329, 953, 1015, 1261, 1887
TspMI	CCCGGG	1 cut(s)	513
TspRI	CASTG	6 cut(s)	403, 1200, 1268, 1960, 2392, 3168
Tth111I	GACNNNGTC	1 cut(s)	2323
Van91I	CCANNNNNTGG	2 cut(s)	1510, 1808
VneI	GTGCAC	1 cut(s)	2274
VpaK11BI	GGWCC	7 cut(s)	492, 548, 702, 810, 947, 1349, 1607
XapI	RAATTY	3 cut(s)	266, 368, 1463
XbaI	TCTAGA	1 cut(s)	692
XceI	RCATGY	3 cut(s)	1076, 1430, 1624
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1154
XhoI	CTCGAG	1 cut(s)	3113
XmaI	CCCGGG	1 cut(s)	513
XmaJI	CCTAGG	1 cut(s)	287
XmnI	GAANNNNTTC	1 cut(s)	1404
XspI	CTAG	4 cut(s)	288, 693, 747, 3168
Zsp2I	ATGCAT	2 cut(s)	472, 2635

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.