Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0002501

Physical Location & Seq

Genomic Coordinates Forward (+)

3139844 .. 3146851

Gene Structure 7008 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g03700.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2514 bp

ATGAAAGATACTCAAGGGACAATGTCTATCCAAGAAATGCTTTTCCTTGTGATATTCTGGATAGGGATAACTATCCACCACCACCTCCTCATGCTGTTGGTGTCTGGCCACACTCAAGAAGAAGTTATGAGGAAGATGTTCCAATCGAGAGGGAACCTAGGCGACATGAGAAACAATACATGGATTCGTATCACGAGATGGATAACTTTCTTGATCGATGAGATCGATTCATTTCAGGATTTTGATAAATTTCGGGATAGCTATCGTAGTGTTGACAACTATCGTGATCCTGGGTTTGACAGGATTGCTCGGTTTGGTGGACGTGATCGTGATGATTATGCATATGATGATTTTGACTCTAGGCCTCGTGCAACCCATCAGAACAGGGAGGATAGTCGTGGAAGGGATTATGACTATGGTCGATACAGTTATGATTCTGATTACGACAGAAGTAGTAGGAGAGATGGCAATTGGAGGCGTCGGCGATCTCGTGAATCCCATGACCGTGACCGTGATAAGAAATGTTTGAGTAGGGAGAGAGAACAGAGTCCTCATAGAAGGTATGAGCGTTCCCGTTCTCGGTCCATTTCTCGTGGGCATGATGATCGATCTCGATCAAGGTCCCCTAGAGGTCGAAGCCATGGGCGAAGTCATCGAGAGGACAGCTATGATGATGAACGGTATGAGAGAACTGATAAGCGAAGGGACCGTGATGAGAAACGCCATAGAGAATATTATTCTGTGGCCCCATCTGCAACTATTGTTGTGAAGGGTCTTTCCCAGAAGACGAATGAGGAAGATTTATACCAGATACTTTCTGAATGGGGACCTCTTCGACATGTCCGTGTGATCAAAGAACGTAATTCTGGCACTTCTCGTGGTTTTGCATTTATTGATTTTCCTTCTGTGGGAGCAGCTCGCACTATGATGGACAAGATTGGGGATGAAGGGCTTGTGGTTGATGACAGGAAGCTTTTTTTCGAGTATAGTAGTAAGCCAACTGGGGGTGCAGGTGGATCTTTTGGTCAGGAGAATGCCGTTAAATTAGGCCATAATAGCCATAAAAACATCACGGTGCCGTCTGATTGGATGTGCATAAGTTGTGAATATGTTAATTTTGCACGGCGCACTTCCTGTTTTCAGTGCAATAAGGCACGAACTGAGGATGCTCCCGCAGCAGATATTTCTTTTTCCAATCAAACGACTTCAGCTAAGAAGGGTTCTGAAGCTGGTCCTACTCATGTCTTGGTTGTTCGTGGACTGGATGAAAATGCTGATGAGGAAATGTTGCGCTATGAGTTTTCCAAACATGCTGCAATTAAGGATCTTCGTCTTGTGAGAGACAAATTTACTCATGTTTCAAGAGGATTTGCTTTTGTACATTTCCATTCGATAGGAGATGCTACAAAAGCTCTTGAAGCAACAAACGGAACAACCCTTGAGAGGAATGGGCAAATTTTGAGAGTAGCATATGCAAAGAGCGTTCTTGGTCCAGGATCTTCACAGTCAAGCAGCCTGGCAGCTGCTGCAATTGAGGCAGCCACATTTGCTCAACAGTATGACGCTGTTGGATGGGCTCCAAAGGAATATAATGCAGATGATAAACAATCCACTAACGAGCAAAATGGTGGGGAGATGGCAGTACAACAAGATGGTTTGGTTCCACAATCTGGTTTTGTGTGGGATGAGGCATCTGGTTATTACTATGATGCTGCTTCTGGGTTCTACTATGACCAAAATACAGGCCTTTACTACGATGGTAACAGTGGCGTTTGGTATACATATGACCAACAAACTCAGCAGTACATCCCTTGTACTGATCAAAATGATAACAAAACATCTGCTGATCAATCTGAGCTTTCCAAGGCATCGGATGGTTCAAGTAATAGAAAAGCAGTAATTTCTGCACCAGCTACAACATCAACATCTGAGAAGGCTGCGTCGTTACCAGATGCAGTCCAGGCTGCTGCAGCAGCAGCAATAGCTGCAGAGAAAAAGGAAAAGGAAAAGGCAAAAGAGATCAAACTGGCTTCAAAGAGCAGTATTTTGGCAAACAAGAAAAAAATGAGTAATGTGTTGACAATGTGGAAGCAAAGGAATCATGAAGGGCAAGCAACCCGTGTAGCTCTGGATGACAACCAGCCAAGTGGTTCGGTTGATGATAGACCAGTTTCCTCTGTGCAGTCTGCAAAGAGCAAGTTTAAAACTGATGTGACAAAGGAGACTACTACATCTAATTCAGGGGTTACTGCAACTGTTTCTGCTGCAGAGACTGTTGGTTTGGAGTGTCCAGTTATGCCAAGGCCTGTGAGTAACAGTATAGGAGGGACAGTGATGGGAGTCATAAGGGGATCGATCCTCAAGAATGAAAAATGGAAGAGGTGTGCTGAAATCAGATGCCTCGTTTTCAGGATCAAGTGTTGGACTTTCCACACCTTCGACTTCTGCTCCAGGCAAGGCAGGTTCATCTGCATCAACAAATGCAGTCACCCCCACAGCATTGACACCCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000381 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0010468 GO:0010941 GO:0010942 GO:0016043 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0022607 GO:0022613 GO:0022618 GO:0031323 GO:0034622 GO:0034641 GO:0042981 GO:0043065 GO:0043067 GO:0043068 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048024 GO:0048518 GO:0048522 GO:0050684 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065003 GO:0065007 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1903311

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

G-patch RRM_1

Protein Analysis

838

Amino Acids

94.7

Weight (kDa)

8.75

Isoelectric Point (pI)

51.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002501)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54230 AT3G54230 AT3G54230 AT3G54230 AT3G54230
fragaria_vesca	FvH4_7g04410 FvH4_7g04410 FvH4_7g04410 FvH4_7g04410 FvH4_7g04410 FvH4_7g04410 FvH4_7g04410 FvH4_7g04410
malus_domestica	MD00G1152000.v1.1 MD02G1270000.v1.1
prunus_persica	Prupe.2G049800_v2.0.a1 Prupe.2G049800_v2.0.a1 Prupe.2G049800_v2.0.a1 Prupe.2G049800_v2.0.a1 Prupe.2G049800_v2.0.a1 Prupe.2G049800_v2.0.a1 Prupe.2G049800_v2.0.a1 Prupe.2G049800_v2.0.a1 Prupe.2G049800_v2.0.a1 Prupe.2G049800_v2.0.a1 Prupe.2G049800_v2.0.a1
pyrus_communis	pycom02g23120 pycom07g03700
rosa_chinensis	RchiOBHm_Chr1g0329501
rosa_laevigata	RLG00000029881
rosa_multiflora	Rmu_sc0004805.1_g000032 Rmu_sc0016170.1_g000004
rosa_roxburghii	Rroxscaffold_4G00321020
rosa_rugosa	Rorug01G0081000 Rorug01G0081100
rosa_samantha	Rh1AG099500 Rh1BG079200 Rh1CG095400 Rh1DG103200
rosa_wichuraiana	Rw0G014300 Rw1G007750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1001
Acc36I	ACCTGC	2 cut(s)	1001, 2451
AccB1I	GGYRCC	1 cut(s)	1075
AccB7I	CCANNNNNTGG	1 cut(s)	1670
AccI	GTMKAC	1 cut(s)	1778
AciI	CCGC	1 cut(s)	1173
AclWI	GGATC	7 cut(s)	281, 1024, 1332, 1504, 2350, 2359, 2420
AcoI	YGGCCR	1 cut(s)	106
AcsI	RAATTY	3 cut(s)	248, 1346, 1455
AcuI	CTGAAG	2 cut(s)	1191, 1245
AcyI	GRCGYC	1 cut(s)	478
AfaI	GTAC	4 cut(s)	1380, 1644, 1805, 1816
AfiI	CCNNNNNNNGG	5 cut(s)	579, 908, 1004, 1443, 1670
AflIII	ACRYGT	1 cut(s)	838
AgsI	TTSAA	4 cut(s)	1362, 1418, 1881, 2034
AjiI	CACGTC	1 cut(s)	323
AjnI	CCWGG	5 cut(s)	289, 1492, 1515, 1959, 2450
Alw26I	GTCTC	3 cut(s)	1335, 2216, 2264
AlwI	GGATC	7 cut(s)	281, 1024, 1332, 1504, 2350, 2359, 2420
AlwNI	CAGNNNCTG	2 cut(s)	1526, 2273
AoxI	GGCC	6 cut(s)	106, 362, 744, 1048, 1744, 2303
ApoI	RAATTY	3 cut(s)	248, 1346, 1455
ArsI	GACNNNNNNTTYG	2 cut(s)	2263, 2295
Asp700I	GAANNNNTTC	1 cut(s)	137
AspA2I	CCTAGG	1 cut(s)	157
AspLEI	GCGC	2 cut(s)	1128, 1293
AspS9I	GGNCC	7 cut(s)	582, 621, 706, 745, 827, 1232, 1490
AsuHPI	GGTGA	1 cut(s)	2480
AvaII	GGWCC	6 cut(s)	582, 621, 706, 827, 1232, 1490
AvrII	CCTAGG	1 cut(s)	157
BalI	TGGCCA	1 cut(s)	108
BanI	GGYRCC	1 cut(s)	1075
BanII	GRGCYC	1 cut(s)	1579
BauI	CACGAG	5 cut(s)	193, 366, 489, 591, 876
BbsI	GAAGAC	1 cut(s)	791
BceAI	ACGGC	3 cut(s)	1022, 1063, 1139
BcgI	CGANNNNNNTGC	2 cut(s)	587, 621
BciT130I	CCWGG	5 cut(s)	291, 1494, 1517, 1961, 2452
BclI	TGATCA	3 cut(s)	849, 1819, 1846
BcoDI	GTCTC	3 cut(s)	1335, 2216, 2264
BfaI	CTAG	3 cut(s)	158, 360, 627
BfmI	CTRYAG	3 cut(s)	1968, 1986, 2265
BfuAI	ACCTGC	2 cut(s)	1001, 2451
BlnI	CCTAGG	1 cut(s)	157
Bme1390I	CCNGG	5 cut(s)	291, 1494, 1517, 1961, 2452
Bme18I	GGWCC	6 cut(s)	582, 621, 706, 827, 1232, 1490
BmgBI	CACGTC	1 cut(s)	323
BmgT120I	GGNCC	7 cut(s)	582, 621, 706, 745, 827, 1232, 1490
BmiI	GGNNCC	8 cut(s)	155, 623, 707, 747, 828, 1077, 1578, 1662
BmrFI	CCNGG	5 cut(s)	291, 1494, 1517, 1961, 2452
BmrI	ACTGGG	1 cut(s)	1011
BmsI	GCATC	8 cut(s)	1156, 1390, 1699, 1700, 1877, 1942, 2387, 2481
BmuI	ACTGGG	1 cut(s)	1011
BoxI	GACNNNNGTC	1 cut(s)	417
BpiI	GAAGAC	1 cut(s)	791
BpmI	CTGGAG	1 cut(s)	2434
BpuEI	CTTGAG	3 cut(s)	99, 1460, 2345
Bsa29I	ATCGAT	4 cut(s)	216, 225, 607, 2354
BsaBI	GATNNNNATC	4 cut(s)	71, 188, 261, 613
BsaHI	GRCGYC	1 cut(s)	478
BsaJI	CCNNGG	5 cut(s)	157, 290, 640, 1863, 2300
BsaXI	ACNNNNNCTCC	4 cut(s)	2316, 2346, 2432, 2462
Bsc4I	CCNNNNNNNGG	5 cut(s)	579, 908, 1004, 1443, 1670
Bse1I	ACTGG	5 cut(s)	1006, 1266, 2031, 2168, 2291
Bse8I	GATNNNNATC	4 cut(s)	71, 188, 261, 613
BseBI	CCWGG	5 cut(s)	291, 1494, 1517, 1961, 2452
BseCI	ATCGAT	4 cut(s)	216, 225, 607, 2354
BseDI	CCNNGG	5 cut(s)	157, 290, 640, 1863, 2300
BseGI	GGATG	9 cut(s)	949, 1095, 1171, 1270, 1577, 1690, 1806, 1879, 2137
BseJI	GATNNNNATC	4 cut(s)	71, 188, 261, 613
BseLI	CCNNNNNNNGG	5 cut(s)	579, 908, 1004, 1443, 1670
BseMII	CTCAG	4 cut(s)	1152, 1811, 1845, 1920
BseNI	ACTGG	5 cut(s)	1006, 1266, 2031, 2168, 2291
BseRI	GAGGAG	1 cut(s)	77
BsgI	GTGCAG	3 cut(s)	1029, 1890, 2201
BshFI	GGCC	6 cut(s)	108, 364, 746, 1050, 1746, 2305
BshNI	GGYRCC	1 cut(s)	1075
BshVI	ATCGAT	4 cut(s)	216, 225, 607, 2354
BslFI	GGGAC	5 cut(s)	31, 607, 719, 840, 2341
BslI	CCNNNNNNNGG	5 cut(s)	579, 908, 1004, 1443, 1670
BsmAI	GTCTC	3 cut(s)	1335, 2216, 2264
BsmFI	GGGAC	5 cut(s)	31, 607, 719, 840, 2341
BsmI	GAATGC	1 cut(s)	1039
BsnI	GGCC	6 cut(s)	108, 364, 746, 1050, 1746, 2305
Bsp1286I	GDGCHC	1 cut(s)	1579
Bsp1407I	TGTACA	1 cut(s)	1378
Bsp19I	CCATGG	1 cut(s)	640
BspACI	CCGC	1 cut(s)	1173
BspANI	GGCC	6 cut(s)	108, 364, 746, 1050, 1746, 2305
BspCNI	CTCAG	4 cut(s)	1153, 1810, 1846, 1921
BspDI	ATCGAT	4 cut(s)	216, 225, 607, 2354
BspHI	TCATGA	1 cut(s)	2101
BspLI	GGNNCC	8 cut(s)	155, 623, 707, 747, 828, 1077, 1578, 1662
BspMAI	CTGCAG	3 cut(s)	1972, 1990, 2269
BspMI	ACCTGC	2 cut(s)	1001, 2451
BspPI	GGATC	7 cut(s)	281, 1024, 1332, 1504, 2350, 2359, 2420
BspT107I	GGYRCC	1 cut(s)	1075
BsrGI	TGTACA	1 cut(s)	1378
BsrI	ACTGG	5 cut(s)	1006, 1266, 2031, 2168, 2291
BssECI	CCNNGG	5 cut(s)	157, 290, 640, 1863, 2300
BssNAI	GTATAC	1 cut(s)	1779
BssNI	GRCGYC	1 cut(s)	478
BssSI	CACGAG	5 cut(s)	193, 366, 489, 591, 876
BssT1I	CCWWGG	4 cut(s)	157, 640, 1863, 2300
Bst1107I	GTATAC	1 cut(s)	1779
Bst2BI	CACGAG	5 cut(s)	193, 366, 489, 591, 876
Bst2UI	CCWGG	5 cut(s)	291, 1494, 1517, 1961, 2452
Bst6I	CTCTTC	2 cut(s)	837, 2372
BstACI	GRCGYC	1 cut(s)	478
BstAPI	GCANNNNNTGC	2 cut(s)	1526, 1985
BstAUI	TGTACA	1 cut(s)	1378
BstC8I	GCNNGC	2 cut(s)	919, 2112
BstDEI	CTNAG	5 cut(s)	1161, 1212, 1797, 1854, 1929
BstDSI	CCRYGG	1 cut(s)	640
BstF5I	GGATG	9 cut(s)	949, 1095, 1171, 1270, 1577, 1690, 1806, 1879, 2137
BstHHI	GCGC	2 cut(s)	1128, 1293
BstMAI	GTCTC	3 cut(s)	1335, 2216, 2264
BstNI	CCWGG	5 cut(s)	291, 1494, 1517, 1961, 2452
BstNSI	RCATGY	2 cut(s)	842, 1313
BstPAI	GACNNNNGTC	1 cut(s)	417
BstSCI	CCNGG	5 cut(s)	289, 1492, 1515, 1959, 2450
BstSFI	CTRYAG	3 cut(s)	1968, 1986, 2265
BstV2I	GAAGAC	1 cut(s)	791
BstX2I	RGATCY	3 cut(s)	1016, 1324, 1496
BstXI	CCANNNNNNTGG	1 cut(s)	2147
BstYI	RGATCY	3 cut(s)	1016, 1324, 1496
BstZ17I	GTATAC	1 cut(s)	1779
Bsu15I	ATCGAT	4 cut(s)	216, 225, 607, 2354
BsuRI	GGCC	6 cut(s)	108, 364, 746, 1050, 1746, 2305
BsuTUI	ATCGAT	4 cut(s)	216, 225, 607, 2354
BtgI	CCRYGG	1 cut(s)	640
BtrI	CACGTC	1 cut(s)	323
BtsCI	GGATG	9 cut(s)	949, 1095, 1171, 1270, 1577, 1690, 1806, 1879, 2137
BtsIMutI	CAGTG	3 cut(s)	1148, 1771, 2337
BveI	ACCTGC	2 cut(s)	1001, 2451
Cac8I	GCNNGC	2 cut(s)	919, 2112
CaiI	CAGNNNCTG	2 cut(s)	1526, 2273
CciI	TCATGA	1 cut(s)	2101
CfoI	GCGC	2 cut(s)	1128, 1293
Cfr13I	GGNCC	7 cut(s)	582, 621, 706, 745, 827, 1232, 1490
ClaI	ATCGAT	4 cut(s)	216, 225, 607, 2354
CseI	GACGC	3 cut(s)	467, 1571, 1929
Csp6I	GTAC	4 cut(s)	1379, 1643, 1804, 1815
CviQI	GTAC	4 cut(s)	1379, 1643, 1804, 1815
DdeI	CTNAG	5 cut(s)	1161, 1212, 1797, 1854, 1929
DraI	TTTAAA	1 cut(s)	2203
EaeI	YGGCCR	1 cut(s)	106
Eam1104I	CTCTTC	2 cut(s)	837, 2372
EarI	CTCTTC	2 cut(s)	837, 2372
Eco130I	CCWWGG	4 cut(s)	157, 640, 1863, 2300
Eco147I	AGGCCT	3 cut(s)	364, 1746, 2305
Eco24I	GRGCYC	1 cut(s)	1579
Eco47I	GGWCC	6 cut(s)	582, 621, 706, 827, 1232, 1490
Eco57I	CTGAAG	2 cut(s)	1191, 1245
EcoO109I	RGGNCCY	2 cut(s)	621, 827
EcoRII	CCWGG	5 cut(s)	289, 1492, 1515, 1959, 2450
EcoT14I	CCWWGG	4 cut(s)	157, 640, 1863, 2300
EcoT22I	ATGCAT	1 cut(s)	343
EcoT38I	GRGCYC	1 cut(s)	1579
ErhI	CCWWGG	4 cut(s)	157, 640, 1863, 2300
FalI	AAGNNNNNCTT	2 cut(s)	24, 56
FaqI	GGGAC	5 cut(s)	31, 607, 719, 840, 2341
FauI	CCCGC	1 cut(s)	1180
FauNDI	CATATG	3 cut(s)	343, 1471, 1783
FbaI	TGATCA	3 cut(s)	849, 1819, 1846
FblI	GTMKAC	1 cut(s)	1778
FokI	GGATG	9 cut(s)	956, 1102, 1178, 1277, 1584, 1697, 1793, 1886, 2144
FriOI	GRGCYC	1 cut(s)	1579
FspBI	CTAG	3 cut(s)	158, 360, 627
GlaI	GCGC	2 cut(s)	1127, 1292
GsuI	CTGGAG	1 cut(s)	2434
HaeIII	GGCC	6 cut(s)	108, 364, 746, 1050, 1746, 2305
HgaI	GACGC	3 cut(s)	467, 1571, 1929
HhaI	GCGC	2 cut(s)	1128, 1293
Hin1I	GRCGYC	1 cut(s)	478
Hin6I	GCGC	2 cut(s)	1126, 1291
HinP1I	GCGC	2 cut(s)	1126, 1291
HincII	GTYRAC	2 cut(s)	274, 2079
HindII	GTYRAC	2 cut(s)	274, 2079
HindIII	AAGCTT	1 cut(s)	971
HinfI	GANTC	8 cut(s)	184, 227, 356, 434, 494, 547, 2098, 2340
HphI	GGTGA	1 cut(s)	2480
Hpy166II	GTNNAC	5 cut(s)	274, 320, 1259, 1779, 2079
Hpy188I	TCNGA	9 cut(s)	381, 439, 820, 1084, 1225, 1855, 1873, 1930, 2396
Hpy8I	GTNNAC	5 cut(s)	274, 320, 1259, 1779, 2079
Hpy99I	CGWCG	2 cut(s)	483, 1945
HpyCH4IV	ACGT	2 cut(s)	322, 859
HpyF3I	CTNAG	5 cut(s)	1161, 1212, 1797, 1854, 1929
HpySE526I	ACGT	2 cut(s)	322, 859
Hsp92I	GRCGYC	1 cut(s)	478
HspAI	GCGC	2 cut(s)	1126, 1291
Ksp22I	TGATCA	3 cut(s)	849, 1819, 1846
LmnI	GCTCC	4 cut(s)	911, 1174, 1582, 2453
LweI	GCATC	8 cut(s)	1156, 1390, 1699, 1700, 1877, 1942, 2387, 2481
MaeI	CTAG	3 cut(s)	158, 360, 627
MaeII	ACGT	2 cut(s)	322, 859
MaeIII	GTNAC	7 cut(s)	506, 1760, 1944, 2212, 2245, 2312, 2486
MboII	GAAGA	8 cut(s)	131, 145, 796, 809, 824, 1319, 1491, 2389
MfeI	CAATTG	2 cut(s)	469, 1530
MflI	RGATCY	3 cut(s)	1016, 1324, 1496
MhlI	GDGCHC	1 cut(s)	1579
MlsI	TGGCCA	1 cut(s)	108
MluNI	TGGCCA	1 cut(s)	108
MlyI	GAGTC	3 cut(s)	350, 556, 2349
MmeI	TCCRAC	2 cut(s)	1549, 2402
Mox20I	TGGCCA	1 cut(s)	108
Mph1103I	ATGCAT	1 cut(s)	343
MroXI	GAANNNNTTC	1 cut(s)	137
MscI	TGGCCA	1 cut(s)	108
MseI	TTAA	4 cut(s)	1041, 1113, 1320, 2202
MslI	CAYNNNNRTG	4 cut(s)	504, 843, 926, 1073
Msp20I	TGGCCA	1 cut(s)	108
MspA1I	CMGCKG	1 cut(s)	1523
MspR9I	CCNGG	5 cut(s)	291, 1494, 1517, 1961, 2452
MunI	CAATTG	2 cut(s)	469, 1530
Mva1269I	GAATGC	1 cut(s)	1039
MvaI	CCWGG	5 cut(s)	291, 1494, 1517, 1961, 2452
NcoI	CCATGG	1 cut(s)	640
NdeI	CATATG	3 cut(s)	343, 1471, 1783
NlaIV	GGNNCC	8 cut(s)	155, 623, 707, 747, 828, 1077, 1578, 1662
NmuCI	GTSAC	3 cut(s)	506, 2212, 2486
NsiI	ATGCAT	1 cut(s)	343
NspI	RCATGY	2 cut(s)	842, 1313
PagI	TCATGA	1 cut(s)	2101
PaqCI	CACCTGC	1 cut(s)	1001
PceI	AGGCCT	3 cut(s)	364, 1746, 2305
PciI	ACATGT	1 cut(s)	838
PcsI	WCGNNNNNNNCGW	3 cut(s)	222, 487, 841
PctI	GAATGC	1 cut(s)	1039
PdmI	GAANNNNTTC	1 cut(s)	137
PfeI	GAWTC	5 cut(s)	184, 227, 434, 494, 2098
PflFI	GACNNNGTC	1 cut(s)	22
PflMI	CCANNNNNTGG	1 cut(s)	1670
PfoI	TCCNGGA	1 cut(s)	1492
PleI	GAGTC	3 cut(s)	350, 555, 2348
PpsI	GAGTC	3 cut(s)	350, 555, 2348
PpuMI	RGGWCCY	2 cut(s)	621, 827
PscI	ACATGT	1 cut(s)	838
PshAI	GACNNNNGTC	1 cut(s)	417
Psp5II	RGGWCCY	2 cut(s)	621, 827
Psp6I	CCWGG	5 cut(s)	289, 1492, 1515, 1959, 2450
PspGI	CCWGG	5 cut(s)	289, 1492, 1515, 1959, 2450
PspN4I	GGNNCC	8 cut(s)	155, 623, 707, 747, 828, 1077, 1578, 1662
PspPI	GGNCC	7 cut(s)	582, 621, 706, 745, 827, 1232, 1490
PspPPI	RGGWCCY	2 cut(s)	621, 827
PstI	CTGCAG	3 cut(s)	1972, 1990, 2269
PstNI	CAGNNNCTG	2 cut(s)	1526, 2273
PsuI	RGATCY	3 cut(s)	1016, 1324, 1496
PsyI	GACNNNGTC	1 cut(s)	22
PvuII	CAGCTG	1 cut(s)	1523
RsaI	GTAC	4 cut(s)	1380, 1644, 1805, 1816
RsaNI	GTAC	4 cut(s)	1379, 1643, 1804, 1815
RseI	CAYNNNNRTG	4 cut(s)	504, 843, 926, 1073
SaqAI	TTAA	4 cut(s)	1041, 1113, 1320, 2202
Sau96I	GGNCC	7 cut(s)	582, 621, 706, 745, 827, 1232, 1490
SchI	GAGTC	3 cut(s)	350, 556, 2349
ScrFI	CCNGG	5 cut(s)	291, 1494, 1517, 1961, 2452
SduI	GDGCHC	1 cut(s)	1579
SfaNI	GCATC	8 cut(s)	1156, 1390, 1699, 1700, 1877, 1942, 2387, 2481
SfcI	CTRYAG	3 cut(s)	1968, 1986, 2265
SinI	GGWCC	6 cut(s)	582, 621, 706, 827, 1232, 1490
SmiMI	CAYNNNNRTG	4 cut(s)	504, 843, 926, 1073
SmlI	CTYRAG	4 cut(s)	12, 114, 1439, 2360
SmoI	CTYRAG	4 cut(s)	12, 114, 1439, 2360
SseBI	AGGCCT	3 cut(s)	364, 1746, 2305
SsiI	CCGC	1 cut(s)	1173
SspI	AATATT	1 cut(s)	734
SspMI	CTAG	3 cut(s)	158, 360, 627
StuI	AGGCCT	3 cut(s)	364, 1746, 2305
StyD4I	CCNGG	5 cut(s)	289, 1492, 1515, 1959, 2450
StyI	CCWWGG	4 cut(s)	157, 640, 1863, 2300
TaiI	ACGT	2 cut(s)	325, 862
TaqII	GACCGA	1 cut(s)	570
TatI	WGTACW	4 cut(s)	1378, 1642, 1803, 1814
TfiI	GAWTC	5 cut(s)	184, 227, 434, 494, 2098
Tru1I	TTAA	4 cut(s)	1041, 1113, 1320, 2202
Tru9I	TTAA	4 cut(s)	1041, 1113, 1320, 2202
TscAI	CASTG	3 cut(s)	1148, 1771, 2337
TseFI	GTSAC	3 cut(s)	506, 2212, 2486
Tsp45I	GTSAC	3 cut(s)	506, 2212, 2486
TspDTI	ATGAA	8 cut(s)	17, 219, 690, 960, 1281, 2118, 2382, 2455
TspGWI	ACGGA	2 cut(s)	833, 1443
TspRI	CASTG	3 cut(s)	1148, 1771, 2337
Tth111I	GACNNNGTC	1 cut(s)	22
Van91I	CCANNNNNTGG	1 cut(s)	1670
VpaK11BI	GGWCC	6 cut(s)	582, 621, 706, 827, 1232, 1490
XapI	RAATTY	3 cut(s)	248, 1346, 1455
XceI	RCATGY	2 cut(s)	842, 1313
XmaJI	CCTAGG	1 cut(s)	157
XmiI	GTMKAC	1 cut(s)	1778
XmnI	GAANNNNTTC	1 cut(s)	137
XspI	CTAG	3 cut(s)	158, 360, 627
Zsp2I	ATGCAT	1 cut(s)	343

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.