Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0002501

Physical Location & Seq

Genomic Coordinates Forward (+)

5722182 .. 5734112

Gene Structure 11931 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G049800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3351 bp

ATGGGAATTGTAGGTGCTTGGTTCATCACGGGCATAACTGTGTGTGTCTGTTTGTGCATTATATTACAGGAAAGGTATTCAAATTCTGAACGATATCATCATCGAGCGCTTTGTCGAGTTTTGCTTGCATGCAAGAAAGAAATGGATCCCGGTCGCTATGGTCTTCAGCAAGGATGGGATAATAACAGCGCTCTGGAGGGGTATGCTGCGGTCCATGAGCCAAACTTTCGGGTCGGTGGTTCATACGATGAAAGGAGGTTTATAGATGACAGATACTCAAGGGACGACGTCTATCCAAGAAATGCTTTTCACCGCGATGTTTTGGATAGGGATAACTATCCACCACCACCTCATGCTGTTGGTGTATGGCCACATTCAAGAAGAAGAAGTTATGAAGAAGAAATTCCCGTTGATAGGGATAGGAGACATGAGAAACAATACATTGATTCATATCATGAGATGGATAACTTTCGTGATCATGAGATGGATAACTTTCGTGATCATGAGATTGATACATTTCAGGAATTTGATAAATTTCGAGATAGCTATCGCAGTGTTGATAGCTATCGTGATCCTGGATTTGACAGGATTGCAAGGCTTGGTGGACGTGATCGTGATGATTATGCATATGATGATTTTGACTATAGGTCCCGTGCTACCCATCAAAACAGAGAGGAGAGTCGTGAAAGGGATTATGACTATGGCCGACACAGTTATGATTCTGATTATGACAGAGGTAGTAGGAGAGATAGCAATTGGAGGCGTCGTGGATCTCGTGAATCTCGTGAATCTCGTGACCGAGAGCGTGAGAAGAAATGTTTGAGTAGGGAAAGAGAACAGAGTCCACATAGAAGGCATGAGCGTTCTCGCTCCCGGTCCATTTCTCGCGGGCATGAGGATCGTCCTAGATCAAGGTCCCCTAGAGGTCGAAGCCATGGACGAAGTCATCGAGAGGACAGCTATGATGATGGACGGCATGAGAGAACTGATAGGCGAAGGGACCGTGATGAGAAACGCCAGAGAGAGCATTATTCTGTGGCCCCATCTGCAACTATTGTTGTGAAGGGTCTTTCACAGAAGACGACTGAGGAAGATCTATACCAGATCCTTACTGAATGGGGACCCCTTAGACATGTCCGTGTGATCAAAGAACGTAATTCTGGCATCTCTCGTGGATTTGCTTTTATTGATTTTCCTTCTGTGGGAGCAGCATGCGCTATGATGGACAAGATTGGGGATGATGGACTTGTGGTGGATGGCCGAAAGCTTTTTTTTGAGTACAGTAGTAAGCCGACTGGGGGTGCAGGTGGATCTTTTGGTCAGGAGAATGCTGTGAAATCAGGCCATAATAACCGTAAAAGCATCACAGTGCCCTCTGATTGGATGTGCATTAGTTGTGAATATGTTAATTTTGCACGGCGGACATCCTGCTTTCAGTGCAATAAGGCACGAACTGAGGATGCTCCGGCAGCAGATATTTCTTTATCCAATCAAATGACTTCAGCAAAGAAAGGATCTGAAGCTGGTCCTACTCATGTTTTGGTTGTTCGCGGACTGGATGAAAATGCTGATGAGGAAATGCTGCGCTATGAATTTTCCAAACATGCCGCAATTAAGGATCTTCGTCTTGTTAGAGACAAATTTACTCATGTTTCAAGGGGATTTGCATTTGTACATTTCCATTCGGTGGGAGATGCTACAAAAGCTCTTGAAGCAACAAATGGAACAACACTTGAGAGGAATGGGCAAATTTTGAGAGTAGCATATGCAAAGAGCATTCTTGGTCCAGGATCTTCACAGTCAAGCAGCTTGGCAGCTGCGGCAATTGAGGCAGCCACCTTTGCGCAACAGTATGATTCTGTTGGTTGGGCACCAAAGGAATATAATCCAGATGACAATCAATCCACTGGGGGGGAGCAAAATGGCGGGGAGATGGCAGTACAACAAGATGGTTTGGCTCCACAATCTGGTTTTGTGTGGGATGAGGCATCTGGTTATTACTATGATGCTGCTTCTGGGTTCTACTATGATCCAAATACAGGTCTTTACTATGATGGGAACAACGGGATTTGGTATTCATATGACCAGCAAACTCTGCAATACATTCCTTGCACTGATCAGAATGATAACAAAACTTCTGTTAATCAATCTGAGCTTTCCAAGGCATCAGATGCTTCAAGTAATAAAAAGGTAGTAATCTCTGCACCAGCTACAACCTCAACACCATTTGAGAAAGCTGCATCATTACCAGATGCCGTCCAGGCAGCTGCAGAGAAAAAAGAGAAGGAAAAGGCAAAAGAGATCAAATTGGCTTCAAAGAGCAGTATTTTGGCTAACAAGAAGAAAATGAGTAATGTGTTGACGATGTGGAAGCAGAGGAGTCACGAAGGCCAAGCAACCCGTGTAGCTCTGGATGAGAATCAGCCAAGCATATCAGCTGATGATAGACCAGTTTCTTCTGTGCAGTCTACAAAGAGTAAGTTTAAAATTGACGTGACAACCACAAAGGAGAATACTACACCCAGTTCGAGGGTTAGTACAACTGTTTCTGCTGCAGAGACTGCTGGTTTGGAGTCTCCAGTCATGCCAAGGCCTGTGAGCAACAGCATAGGGGGCACACTGATGGGAGTCATAAGGGGCTCTGGAAGAGGTGTGGTGAAATCAGATACCTCGTTTTCAGGATCATCTGGCGGAGTTTCCATTCCTTCAACTTCTGCTGCATGCATGGTATCTGCATCAACAATGGCAGATATCCCCACGGTTTTGACTCCCTTCAGAACAGATGCATCTGCATTGGGTTCTTATACACCACCTGTGGCTGCTGGGAGTGGAAAGAGAAGATTTTCTGAACTGCCAGTAGCACCTGCTTCTGCTCCTAAAGAGCCTCATACTGCATATAGGGATCGTGCAGCCGAGAGAAGGAGCTTGTATGGTTCTTCATTGTCGTTTGGAGATGATTCGTCAGATCTTGGTTTTGGGGAGTCAAATCGAGATTCTGCATCAAGGAAGGGTTCTTTTGATTCAATGCCCTTTCCCCCTGGTGTCGGTGGAGGACGTGCGGTTGGAGATGCGAACATTGACAGTTACGAGGTGATTACAGCTGAAAAAGCAATTGATGAGAGCAATGTGGGCAACAAGATGCTTCGCAACATGGGCTGGCACGAAGGCTTGGGTTTGGGAAGAGATGGAAGTGGAATGGTAGAACCAGTGCAGGCTCAGTCGGTGGAAAGGAGAGCAGGACTTGGGAGTCAACAGAAGAAGCTAGATCCTACTCTGGAGGTGCAGGCTGGAGATAGTTACAAAACACTCATTCACAAGAAGGCACTGGCCAGGTTCCGGGAGATGTCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000381 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0010468 GO:0010941 GO:0010942 GO:0016043 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0022607 GO:0022613 GO:0022618 GO:0031323 GO:0034622 GO:0034641 GO:0042981 GO:0043065 GO:0043067 GO:0043068 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048024 GO:0048518 GO:0048522 GO:0050684 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065003 GO:0065007 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1903311

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

G-patch RRM_1

Protein Analysis

1117

Amino Acids

124.5

Weight (kDa)

7.62

Isoelectric Point (pI)

55.77

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002501)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54230 AT3G54230 AT3G54230 AT3G54230 AT3G54230
fragaria_vesca	FvH4_7g04410 FvH4_7g04410 FvH4_7g04410 FvH4_7g04410 FvH4_7g04410 FvH4_7g04410 FvH4_7g04410 FvH4_7g04410
malus_domestica	MD00G1152000.v1.1 MD02G1270000.v1.1
prunus_persica	Prupe.2G049800_v2.0.a1 Prupe.2G049800_v2.0.a1 Prupe.2G049800_v2.0.a1 Prupe.2G049800_v2.0.a1 Prupe.2G049800_v2.0.a1 Prupe.2G049800_v2.0.a1 Prupe.2G049800_v2.0.a1 Prupe.2G049800_v2.0.a1 Prupe.2G049800_v2.0.a1 Prupe.2G049800_v2.0.a1 Prupe.2G049800_v2.0.a1
pyrus_communis	pycom02g23120 pycom07g03700
rosa_chinensis	RchiOBHm_Chr1g0329501
rosa_laevigata	RLG00000029881
rosa_multiflora	Rmu_sc0004805.1_g000032 Rmu_sc0016170.1_g000004
rosa_roxburghii	Rroxscaffold_4G00321020
rosa_rugosa	Rorug01G0081000 Rorug01G0081100
rosa_samantha	Rh1AG099500 Rh1BG079200 Rh1CG095400 Rh1DG103200
rosa_wichuraiana	Rw0G014300 Rw1G007750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1295, 2872
AasI	GACNNNNNNGTC	1 cut(s)	3246
AatII	GACGTC	1 cut(s)	291
Acc16I	TGCGCA	1 cut(s)	1845
Acc36I	ACCTGC	2 cut(s)	1295, 2872
AccB1I	GGYRCC	1 cut(s)	1870
AccB7I	CCANNNNNTGG	2 cut(s)	1687, 1967
AccI	GTMKAC	1 cut(s)	2468
AccII	CGCG	3 cut(s)	315, 888, 1551
AcoI	YGGCCR	4 cut(s)	368, 703, 1258, 3327
AcsI	RAATTY	7 cut(s)	82, 402, 524, 533, 1592, 1640, 1749
AcuI	CTGAAG	4 cut(s)	149, 1485, 1539, 2758
AcyI	GRCGYC	2 cut(s)	288, 763
AfaI	GTAC	4 cut(s)	1280, 1674, 1941, 2539
AfeI	AGCGCT	2 cut(s)	108, 190
AflIII	ACRYGT	1 cut(s)	1132
AgsI	TTSAA	8 cut(s)	81, 378, 1656, 1712, 2178, 2316, 2709, 3024
AhdI	GACNNNNNGTC	1 cut(s)	646
AjiI	CACGTC	3 cut(s)	608, 2494, 3056
AjnI	CCWGG	5 cut(s)	574, 1786, 2259, 3037, 3329
Alw26I	GTCTC	4 cut(s)	418, 1629, 2552, 2580
AlwNI	CAGNNNCTG	1 cut(s)	2561
Aor51HI	AGCGCT	2 cut(s)	108, 190
AoxI	GGCC	8 cut(s)	368, 703, 1038, 1258, 1342, 2389, 2591, 3327
ApoI	RAATTY	7 cut(s)	82, 402, 524, 533, 1592, 1640, 1749
ArsI	GACNNNNNNTTYG	2 cut(s)	2551, 2583
Asp700I	GAANNNNTTC	2 cut(s)	402, 2842
AspLEI	GCGC	5 cut(s)	109, 191, 1217, 1587, 1846
AspS9I	GGNCC	9 cut(s)	211, 648, 876, 915, 1000, 1039, 1121, 1526, 1784
AsuC2I	CCSGG	3 cut(s)	150, 874, 3338
AsuHPI	GGTGA	3 cut(s)	302, 2668, 3103
AvaII	GGWCC	8 cut(s)	211, 648, 876, 915, 1000, 1121, 1526, 1784
BaeGI	GKGCMC	3 cut(s)	1374, 1873, 2618
BalI	TGGCCA	2 cut(s)	370, 3329
BamHI	GGATCC	1 cut(s)	145
BanI	GGYRCC	1 cut(s)	1870
BanII	GRGCYC	1 cut(s)	2642
BauI	CACGAG	4 cut(s)	774, 783, 792, 1170
BbsI	GAAGAC	2 cut(s)	155, 1085
BceAI	ACGGC	3 cut(s)	989, 1433, 2240
BcgI	CGANNNNNNTGC	2 cut(s)	881, 915
BciT130I	CCWGG	5 cut(s)	576, 1788, 2261, 3039, 3331
BclI	TGATCA	4 cut(s)	475, 499, 1143, 2116
BcnI	CCSGG	3 cut(s)	150, 874, 3338
BcoDI	GTCTC	4 cut(s)	418, 1629, 2552, 2580
BfaI	CTAG	3 cut(s)	906, 921, 3263
BfmI	CTRYAG	3 cut(s)	643, 2268, 2553
BfoI	RGCGCY	2 cut(s)	110, 192
BfuAI	ACCTGC	2 cut(s)	1295, 2872
BglI	GCCNNNNNGGC	1 cut(s)	2261
BglII	AGATCT	2 cut(s)	1093, 2965
Bme1390I	CCNGG	8 cut(s)	150, 576, 874, 1788, 2261, 3039, 3331, 3338
Bme18I	GGWCC	8 cut(s)	211, 648, 876, 915, 1000, 1121, 1526, 1784
BmeRI	GACNNNNNGTC	1 cut(s)	646
BmgBI	CACGTC	3 cut(s)	608, 2494, 3056
BmgT120I	GGNCC	9 cut(s)	211, 648, 876, 915, 1000, 1039, 1121, 1526, 1784
BmrFI	CCNGG	8 cut(s)	150, 576, 874, 1788, 2261, 3039, 3331, 3338
BmrI	ACTGGG	3 cut(s)	1305, 1917, 2517
BmuI	ACTGGG	3 cut(s)	1305, 1917, 2517
BpiI	GAAGAC	2 cut(s)	155, 1085
BpmI	CTGGAG	4 cut(s)	215, 2562, 3296, 3309
BpuEI	CTTGAG	2 cut(s)	262, 1754
BpuMI	CCSGG	3 cut(s)	150, 874, 3338
BsaBI	GATNNNNATC	6 cut(s)	336, 450, 546, 564, 1896, 2418
BsaHI	GRCGYC	2 cut(s)	288, 763
BsaJI	CCNNGG	5 cut(s)	934, 2160, 2588, 2757, 3037
BsaXI	ACNNNNNCTCC	3 cut(s)	751, 781, 3332
Bse1I	ACTGG	9 cut(s)	1300, 1560, 1912, 2450, 2523, 2579, 2855, 3206, 3330
Bse3DI	GCAATG	1 cut(s)	3130
Bse8I	GATNNNNATC	6 cut(s)	336, 450, 546, 564, 1896, 2418
BseBI	CCWGG	5 cut(s)	576, 1788, 2261, 3039, 3331
BseDI	CCNNGG	5 cut(s)	934, 2160, 2588, 2757, 3037
BseGI	GGATG	9 cut(s)	179, 1243, 1261, 1389, 1424, 1465, 1564, 1987, 2419
BseJI	GATNNNNATC	6 cut(s)	336, 450, 546, 564, 1896, 2418
BseMI	GCAATG	1 cut(s)	3130
BseMII	CTCAG	4 cut(s)	1077, 1446, 2142, 3230
BseNI	ACTGG	9 cut(s)	1300, 1560, 1912, 2450, 2523, 2579, 2855, 3206, 3330
BseRI	GAGGAG	2 cut(s)	689, 2392
BseSI	GKGCMC	3 cut(s)	1374, 1873, 2618
BseYI	CCCAGC	1 cut(s)	2822
BsgI	GTGCAG	6 cut(s)	1323, 2187, 2483, 2928, 3230, 3302
Bsh1236I	CGCG	3 cut(s)	315, 888, 1551
Bsh1285I	CGRYCG	1 cut(s)	154
BshFI	GGCC	8 cut(s)	370, 705, 1040, 1260, 1344, 2391, 2593, 3329
BshNI	GGYRCC	1 cut(s)	1870
BsiEI	CGRYCG	1 cut(s)	154
BsiSI	CCGG	4 cut(s)	150, 874, 1466, 3337
BslFI	GGGAC	5 cut(s)	296, 634, 901, 1013, 1134
BsmAI	GTCTC	4 cut(s)	418, 1629, 2552, 2580
BsmFI	GGGAC	5 cut(s)	296, 634, 901, 1013, 1134
BsmI	GAATGC	2 cut(s)	1333, 1776
BsnI	GGCC	8 cut(s)	370, 705, 1040, 1260, 1344, 2391, 2593, 3329
Bsp1286I	GDGCHC	4 cut(s)	1374, 1873, 2618, 2642
Bsp1407I	TGTACA	1 cut(s)	1672
Bsp19I	CCATGG	1 cut(s)	934
BspANI	GGCC	8 cut(s)	370, 705, 1040, 1260, 1344, 2391, 2593, 3329
BspCNI	CTCAG	4 cut(s)	1078, 1447, 2143, 3229
BspFNI	CGCG	3 cut(s)	315, 888, 1551
BspHI	TCATGA	3 cut(s)	454, 478, 502
BspMAI	CTGCAG	2 cut(s)	2272, 2557
BspMI	ACCTGC	2 cut(s)	1295, 2872
BspT107I	GGYRCC	1 cut(s)	1870
BsrDI	GCAATG	1 cut(s)	3130
BsrGI	TGTACA	1 cut(s)	1672
BsrI	ACTGG	9 cut(s)	1300, 1560, 1912, 2450, 2523, 2579, 2855, 3206, 3330
BssECI	CCNNGG	5 cut(s)	934, 2160, 2588, 2757, 3037
BssNI	GRCGYC	2 cut(s)	288, 763
BssSI	CACGAG	4 cut(s)	774, 783, 792, 1170
BssT1I	CCWWGG	3 cut(s)	934, 2160, 2588
Bst2BI	CACGAG	4 cut(s)	774, 783, 792, 1170
Bst2UI	CCWGG	5 cut(s)	576, 1788, 2261, 3039, 3331
Bst6I	CTCTTC	2 cut(s)	2641, 3175
BstACI	GRCGYC	2 cut(s)	288, 763
BstAPI	GCANNNNNTGC	3 cut(s)	2095, 2171, 2561
BstAUI	TGTACA	1 cut(s)	1672
BstC8I	GCNNGC	8 cut(s)	126, 130, 890, 1213, 2722, 3158, 3213, 3285
BstDEI	CTNAG	5 cut(s)	1086, 1127, 1455, 2151, 3216
BstDSI	CCRYGG	2 cut(s)	934, 2757
BstF5I	GGATG	9 cut(s)	179, 1243, 1261, 1389, 1424, 1465, 1564, 1987, 2419
BstFNI	CGCG	3 cut(s)	315, 888, 1551
BstH2I	RGCGCY	2 cut(s)	110, 192
BstHHI	GCGC	5 cut(s)	109, 191, 1217, 1587, 1846
BstMAI	GTCTC	4 cut(s)	418, 1629, 2552, 2580
BstMCI	CGRYCG	1 cut(s)	154
BstNI	CCWGG	5 cut(s)	576, 1788, 2261, 3039, 3331
BstNSI	RCATGY	5 cut(s)	132, 1136, 1215, 1607, 2724
BstSCI	CCNGG	8 cut(s)	148, 574, 872, 1786, 2259, 3037, 3329, 3336
BstSFI	CTRYAG	3 cut(s)	643, 2268, 2553
BstSLI	GKGCMC	3 cut(s)	1374, 1873, 2618
BstUI	CGCG	3 cut(s)	315, 888, 1551
BstV2I	GAAGAC	2 cut(s)	155, 1085
BsuRI	GGCC	8 cut(s)	370, 705, 1040, 1260, 1344, 2391, 2593, 3329
BtgI	CCRYGG	2 cut(s)	934, 2757
BtgZI	GCGATG	1 cut(s)	330
BtrI	CACGTC	3 cut(s)	608, 2494, 3056
BtsCI	GGATG	9 cut(s)	179, 1243, 1261, 1389, 1424, 1465, 1564, 1987, 2419
BtsI	GCAGTG	1 cut(s)	559
BtsIMutI	CAGTG	8 cut(s)	559, 1374, 1442, 1905, 2112, 2618, 3213, 3323
BveI	ACCTGC	2 cut(s)	1295, 2872
Cac8I	GCNNGC	8 cut(s)	126, 130, 890, 1213, 2722, 3158, 3213, 3285
CaiI	CAGNNNCTG	1 cut(s)	2561
CciI	TCATGA	3 cut(s)	454, 478, 502
CfoI	GCGC	5 cut(s)	109, 191, 1217, 1587, 1846
Cfr13I	GGNCC	9 cut(s)	211, 648, 876, 915, 1000, 1039, 1121, 1526, 1784
CseI	GACGC	1 cut(s)	752
Csp6I	GTAC	4 cut(s)	1279, 1673, 1940, 2538
CviQI	GTAC	4 cut(s)	1279, 1673, 1940, 2538
DdeI	CTNAG	5 cut(s)	1086, 1127, 1455, 2151, 3216
DraI	TTTAAA	1 cut(s)	2485
DrdI	GACNNNNNNGTC	1 cut(s)	3246
DriI	GACNNNNNGTC	1 cut(s)	646
DseDI	GACNNNNNNGTC	1 cut(s)	3246
EaeI	YGGCCR	4 cut(s)	368, 703, 1258, 3327
Eam1104I	CTCTTC	2 cut(s)	2641, 3175
Eam1105I	GACNNNNNGTC	1 cut(s)	646
EarI	CTCTTC	2 cut(s)	2641, 3175
EciI	GGCGGA	2 cut(s)	1435, 2706
Eco130I	CCWWGG	3 cut(s)	934, 2160, 2588
Eco147I	AGGCCT	1 cut(s)	2593
Eco24I	GRGCYC	1 cut(s)	2642
Eco32I	GATATC	2 cut(s)	95, 2752
Eco47I	GGWCC	8 cut(s)	211, 648, 876, 915, 1000, 1121, 1526, 1784
Eco47III	AGCGCT	2 cut(s)	108, 190
Eco57I	CTGAAG	4 cut(s)	149, 1485, 1539, 2758
EcoO109I	RGGNCCY	3 cut(s)	648, 915, 1121
EcoRII	CCWGG	5 cut(s)	574, 1786, 2259, 3037, 3329
EcoRV	GATATC	2 cut(s)	95, 2752
EcoT14I	CCWWGG	3 cut(s)	934, 2160, 2588
EcoT22I	ATGCAT	3 cut(s)	628, 2726, 2788
EcoT38I	GRGCYC	1 cut(s)	2642
ErhI	CCWWGG	3 cut(s)	934, 2160, 2588
FalI	AAGNNNNNCTT	2 cut(s)	289, 321
FaqI	GGGAC	5 cut(s)	296, 634, 901, 1013, 1134
FauI	CCCGC	2 cut(s)	881, 1919
FauNDI	CATATG	3 cut(s)	628, 1765, 2080
FbaI	TGATCA	4 cut(s)	475, 499, 1143, 2116
FblI	GTMKAC	1 cut(s)	2468
FokI	GGATG	9 cut(s)	186, 1250, 1268, 1396, 1411, 1472, 1571, 1994, 2426
FriOI	GRGCYC	1 cut(s)	2642
FspBI	CTAG	3 cut(s)	906, 921, 3263
FspI	TGCGCA	1 cut(s)	1845
GlaI	GCGC	5 cut(s)	108, 190, 1216, 1586, 1845
GsaI	CCCAGC	1 cut(s)	2826
GsuI	CTGGAG	4 cut(s)	215, 2562, 3296, 3309
HaeII	RGCGCY	2 cut(s)	110, 192
HaeIII	GGCC	8 cut(s)	370, 705, 1040, 1260, 1344, 2391, 2593, 3329
HapII	CCGG	4 cut(s)	150, 874, 1466, 3337
HgaI	GACGC	1 cut(s)	752
HhaI	GCGC	5 cut(s)	109, 191, 1217, 1587, 1846
Hin1I	GRCGYC	2 cut(s)	288, 763
Hin6I	GCGC	5 cut(s)	107, 189, 1215, 1585, 1844
HinP1I	GCGC	5 cut(s)	107, 189, 1215, 1585, 1844
HincII	GTYRAC	2 cut(s)	2361, 3251
HindII	GTYRAC	2 cut(s)	2361, 3251
HindIII	AAGCTT	1 cut(s)	1265
HpaII	CCGG	4 cut(s)	150, 874, 1466, 3337
HphI	GGTGA	3 cut(s)	302, 2668, 3103
Hpy166II	GTNNAC	5 cut(s)	605, 845, 2361, 2469, 3251
Hpy8I	GTNNAC	5 cut(s)	605, 845, 2361, 2469, 3251
Hpy99I	CGWCG	2 cut(s)	290, 768
HpyCH4IV	ACGT	5 cut(s)	288, 607, 1153, 2493, 3055
HpyF3I	CTNAG	5 cut(s)	1086, 1127, 1455, 2151, 3216
HpySE526I	ACGT	5 cut(s)	288, 607, 1153, 2493, 3055
Hsp92I	GRCGYC	2 cut(s)	288, 763
HspAI	GCGC	5 cut(s)	107, 189, 1215, 1585, 1844
KflI	GGGWCCC	1 cut(s)	1121
Ksp22I	TGATCA	4 cut(s)	475, 499, 1143, 2116
LmnI	GCTCC	7 cut(s)	875, 1205, 1468, 1915, 1963, 2878, 2922
MaeI	CTAG	3 cut(s)	906, 921, 3263
MaeII	ACGT	5 cut(s)	288, 607, 1153, 2493, 3055
MaeIII	GTNAC	5 cut(s)	794, 2381, 2494, 3083, 3296
MfeI	CAATTG	3 cut(s)	754, 1824, 3111
MhlI	GDGCHC	4 cut(s)	1374, 1873, 2618, 2642
MlsI	TGGCCA	2 cut(s)	370, 3329
MluNI	TGGCCA	2 cut(s)	370, 3329
MlyI	GAGTC	8 cut(s)	688, 850, 2389, 2582, 2637, 2761, 2990, 3256
MmeI	TCCRAC	1 cut(s)	3043
Mox20I	TGGCCA	2 cut(s)	370, 3329
Mph1103I	ATGCAT	3 cut(s)	628, 2726, 2788
MroXI	GAANNNNTTC	2 cut(s)	402, 2842
MscI	TGGCCA	2 cut(s)	370, 3329
MseI	TTAA	4 cut(s)	1407, 1614, 2142, 2484
MslI	CAYNNNNRTG	6 cut(s)	38, 315, 714, 1137, 1367, 2621
Msp20I	TGGCCA	2 cut(s)	370, 3329
MspA1I	CMGCKG	4 cut(s)	1817, 2267, 2438, 3101
MspI	CCGG	4 cut(s)	150, 874, 1466, 3337
MspR9I	CCNGG	8 cut(s)	150, 576, 874, 1788, 2261, 3039, 3331, 3338
MunI	CAATTG	3 cut(s)	754, 1824, 3111
Mva1269I	GAATGC	2 cut(s)	1333, 1776
MvaI	CCWGG	5 cut(s)	576, 1788, 2261, 3039, 3331
MvnI	CGCG	3 cut(s)	315, 888, 1551
NciI	CCSGG	3 cut(s)	150, 874, 3338
NcoI	CCATGG	1 cut(s)	934
NdeI	CATATG	3 cut(s)	628, 1765, 2080
NmeAIII	GCCGAG	1 cut(s)	2938
NmuCI	GTSAC	3 cut(s)	794, 2381, 2494
NsbI	TGCGCA	1 cut(s)	1845
NsiI	ATGCAT	3 cut(s)	628, 2726, 2788
NspI	RCATGY	5 cut(s)	132, 1136, 1215, 1607, 2724
PaeI	GCATGC	3 cut(s)	132, 1215, 2724
PagI	TCATGA	3 cut(s)	454, 478, 502
PaqCI	CACCTGC	2 cut(s)	1295, 2872
PceI	AGGCCT	1 cut(s)	2593
PciI	ACATGT	1 cut(s)	1132
PcsI	WCGNNNNNNNCGW	4 cut(s)	772, 781, 790, 946
PctI	GAATGC	2 cut(s)	1333, 1776
PdmI	GAANNNNTTC	2 cut(s)	402, 2842
PfeI	GAWTC	9 cut(s)	446, 719, 779, 788, 1856, 2419, 2957, 2993, 3020
PflFI	GACNNNGTC	2 cut(s)	287, 942
PflMI	CCANNNNNTGG	2 cut(s)	1687, 1967
PfoI	TCCNGGA	3 cut(s)	574, 1786, 3336
PleI	GAGTC	8 cut(s)	687, 849, 2388, 2581, 2636, 2761, 2989, 3255
PpsI	GAGTC	8 cut(s)	687, 849, 2388, 2581, 2636, 2761, 2989, 3255
PpuMI	RGGWCCY	3 cut(s)	648, 915, 1121
PscI	ACATGT	1 cut(s)	1132
Psp5II	RGGWCCY	3 cut(s)	648, 915, 1121
Psp6I	CCWGG	5 cut(s)	574, 1786, 2259, 3037, 3329
PspFI	CCCAGC	1 cut(s)	2822
PspGI	CCWGG	5 cut(s)	574, 1786, 2259, 3037, 3329
PspPI	GGNCC	9 cut(s)	211, 648, 876, 915, 1000, 1039, 1121, 1526, 1784
PspPPI	RGGWCCY	3 cut(s)	648, 915, 1121
PstI	CTGCAG	2 cut(s)	2272, 2557
PstNI	CAGNNNCTG	1 cut(s)	2561
PsyI	GACNNNGTC	2 cut(s)	287, 942
PvuII	CAGCTG	4 cut(s)	1817, 2267, 2438, 3101
RsaI	GTAC	4 cut(s)	1280, 1674, 1941, 2539
RsaNI	GTAC	4 cut(s)	1279, 1673, 1940, 2538
RseI	CAYNNNNRTG	6 cut(s)	38, 315, 714, 1137, 1367, 2621
SaqAI	TTAA	4 cut(s)	1407, 1614, 2142, 2484
Sau96I	GGNCC	9 cut(s)	211, 648, 876, 915, 1000, 1039, 1121, 1526, 1784
SchI	GAGTC	8 cut(s)	688, 850, 2389, 2582, 2637, 2761, 2990, 3256
ScrFI	CCNGG	8 cut(s)	150, 576, 874, 1788, 2261, 3039, 3331, 3338
SduI	GDGCHC	4 cut(s)	1374, 1873, 2618, 2642
SfcI	CTRYAG	3 cut(s)	643, 2268, 2553
SinI	GGWCC	8 cut(s)	211, 648, 876, 915, 1000, 1121, 1526, 1784
SmiMI	CAYNNNNRTG	6 cut(s)	38, 315, 714, 1137, 1367, 2621
SmlI	CTYRAG	2 cut(s)	277, 1733
SmoI	CTYRAG	2 cut(s)	277, 1733
SphI	GCATGC	3 cut(s)	132, 1215, 2724
SseBI	AGGCCT	1 cut(s)	2593
SspMI	CTAG	3 cut(s)	906, 921, 3263
StuI	AGGCCT	1 cut(s)	2593
StyD4I	CCNGG	8 cut(s)	148, 574, 872, 1786, 2259, 3037, 3329, 3336
StyI	CCWWGG	3 cut(s)	934, 2160, 2588
TaiI	ACGT	5 cut(s)	291, 610, 1156, 2496, 3058
TaqI	TCGA	7 cut(s)	103, 115, 538, 928, 949, 2528, 2989
TaqII	GACCGA	1 cut(s)	813
TatI	WGTACW	4 cut(s)	1278, 1672, 1939, 2537
TauI	GCSGC	2 cut(s)	1610, 1823
TfiI	GAWTC	9 cut(s)	446, 719, 779, 788, 1856, 2419, 2957, 2993, 3020
Tru1I	TTAA	4 cut(s)	1407, 1614, 2142, 2484
Tru9I	TTAA	4 cut(s)	1407, 1614, 2142, 2484
TscAI	CASTG	8 cut(s)	559, 1374, 1442, 1912, 2119, 2625, 3213, 3330
TseFI	GTSAC	3 cut(s)	794, 2381, 2494
Tsp45I	GTSAC	3 cut(s)	794, 2381, 2494
TspDTI	ATGAA	9 cut(s)	13, 231, 264, 408, 438, 1575, 1605, 2067, 2928
TspGWI	ACGGA	1 cut(s)	1127
TspRI	CASTG	8 cut(s)	559, 1374, 1442, 1912, 2119, 2625, 3213, 3330
Tth111I	GACNNNGTC	2 cut(s)	287, 942
Van91I	CCANNNNNTGG	2 cut(s)	1687, 1967
VpaK11BI	GGWCC	8 cut(s)	211, 648, 876, 915, 1000, 1121, 1526, 1784
XapI	RAATTY	7 cut(s)	82, 402, 524, 533, 1592, 1640, 1749
XceI	RCATGY	5 cut(s)	132, 1136, 1215, 1607, 2724
XmiI	GTMKAC	1 cut(s)	2468
XmnI	GAANNNNTTC	2 cut(s)	402, 2842
XspI	CTAG	3 cut(s)	906, 921, 3263
ZraI	GACGTC	1 cut(s)	289
Zsp2I	ATGCAT	3 cut(s)	628, 2726, 2788

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.