FvH4_7g06880

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0012039
Physical Location & Seq
Reverse (-)
6873086 .. 6881508
8423 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g06880.t2

Sequence Viewer

Length: 1902 bp
ATGCCACATGTCATCAACCGAGCCAGGTCACCACTCTTGCATTTTGCTCAAGCTCGTCTCAGTCCCAGACTTCCATACCACTCCATGACCCAGAAAGCCTCGCCCAGAATCACAACGCCGCACAGAGACCACAGCGCCAGCTCCGACGTGGCCAAATCCAATTGGCTGATCACCAAGCTCAGCCGAGACGGCAGAATCCGAGAAGCCCGCCAGGTGTTCGACGAAATGCCTGAGAGAGACGTGGTGACGTGGACGACGGTGATCACGGCGTACGTCAAGTCCGGTATGCTGGAGGAGGCCCGGAGCCTCTTCGATAGAGCCGACGCCGTGAAGAATGTGATCACGTGGACGGCGTTGGTCGGCGGGTACATAAGGCTGAGAAGGCTTGAGGAGGCTGAGATGTTGTTCTATCAAATGCCGGTGAGGAATGTGGTGTCGTGGAACACTATGATCGACGGTTATGCGAGGAGCCGGCGCGTGGATGAGGCGTTGGAGTTGTTTGAGAGGATGCCGGAGAGGAATGTGGTATCGTGGAACACGGTTTTGACGGCTCTGGCGCAATGTGGGAGGATCGAGGAGGCCAGGAGGCTGTTTGGTTTGATGCCGGAAAGGGATGTTATTTCGTGGACCGCAATGGTGGCGGGGCTGTCGAGAAATGGGAGGGTTGATGAGGCTAGAGAGGTTTTCGATAGGATGCCGAGGAGGAATGTGGTGTCGTGGAATGCGATGGTCACGGGGTATGCGCAGAATGGGAGGCTGGAGGAGGCTCTGGAGTTGTTTGAGAGGATGCCGGAGAGGGACATGCCTTCGTGGAATACGATGGTTACAGGGTTTATTCAGAATGGGGATTTGGAGCGGGCGTGGGAGTTGTTTGTTCAAATGCCGCAGAAGAATGTCATATCGTGGACTACAATGATCACAGGGTATGTACAAGATGGGAGAAATGAAGAGGCACTGATGATCTTTTCAAAAATGGTGGTAGATAATGGGGCGAGACCTAATGAGGGAACTTTTGTGAGCATCTTGAGTGCTTGTAGTAACCTAGCTGGTCTTTGCGAGGGACGTCAAATGCATCAGATGATAATTAAAACAGTGTATCAGGAATGTGTACATTTGGTGTCTGCACTCATAAATATGTATTCAAAATGTGGGGAGTTAGTCTCTGCTAGGAAGATGTTTGAAGATGGATCGACAATCCATAGGGATTATATCTCTTGGAATGGAATGATTGCAGCCTATGCACATCATGGATGCGGTACTGAGGCAATTAACTTGTATAATGAAATGCGGCAATTAGGGTTCAAACCTGATGATGTTACTTATGTGGGCCTTCTTTCTGCATGCAGCCATGCTGGTTTGGTGGCGGAGGGTTTAAATCTTTTTGATGAGCTTCTTAAAGATGGTTCAATACGAGTGAGGGAAGATCATTACACGTGCTTAGTTGATCTTTGTGGTCGAGCAGGGAGGCTCAAGGAGGCTTTTGATGTTCTCGAGAAGCTCGGGACCAACCAATCAGCATCTAATTGGGGGGCTCTTCTTGCTGGATGTATTGATCATCATAACATGGATACCGGGAAGCTAGCTGCAGAAAAGCTTTTAAATGAGGGCCCAGATGATGCAGGCAGTTACTCGTTGTTGTGGAACTTTTTTGCTAGATCTGGGAATTGGAGAGAAGCTGCAAAGATGAGGATTAAAATGAAAGAAAAGGGGTTGAAGAAGCAGCCTGGTTGTAGTTGGATAGAAGTTGGAAATATGGTGCATGTTTTTGTGGTTGGTGATAAGTCTCACTGTCAATCTCAACTTATATACTCTGCACTATACGGTTTACATCAACAAATGAAAAAGATTGGATGTGTACCAAGCAATTATATGAATTTGCATGAAGAGTTTGTAATTACATAA

Protein Analysis

634

Amino Acids

71.8

Weight (kDa)

7.01

Isoelectric Point (pI)

39.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR PF01535 82 - 106 1.2e-06 PPR repeat
PPR_1 PF12854 142 - 170 3.2e-09 PPR repeat
PPR_2 PF13041 142 - 175 1.2e-09 PPR repeat family
PPR PF01535 145 - 175 9.4e-11 PPR repeat
PPR_2 PF13041 173 - 206 5.1e-06 PPR repeat family
PPR PF01535 176 - 205 2.8e-06 PPR repeat
PPR_2 PF13041 204 - 237 2.6e-06 PPR repeat family
PPR_1 PF12854 204 - 232 9.2e-07 PPR repeat
PPR PF01535 207 - 237 5.6e-08 PPR repeat
PPR_2 PF13041 235 - 268 2.9e-08 PPR repeat family
PPR_1 PF12854 236 - 263 1.4e-07 PPR repeat
PPR PF01535 238 - 267 4.3e-10 PPR repeat
PPR_2 PF13041 269 - 299 4.2e-06 PPR repeat family
PPR PF01535 270 - 299 3.7e-06 PPR repeat
PPR_2 PF13041 297 - 346 5.2e-10 PPR repeat family
PPR PF01535 300 - 327 8.5e-07 PPR repeat
PPR_2 PF13041 402 - 449 2.7e-12 PPR repeat family
PPR PF01535 404 - 434 6.1e-07 PPR repeat
E_motif PF20431 519 - 581 1.3e-17 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1066
Acc16I TGCGCA 1 cut(s) 744
AccBSI CCGCTC 1 cut(s) 856
AccII CGCG 1 cut(s) 477
AclWI GGATC 2 cut(s) 578, 1195
AcoI YGGCCR 1 cut(s) 150
AcsI RAATTY 1 cut(s) 1873
AcvI CACGTG 2 cut(s) 345, 1434
AcyI GRCGYC 2 cut(s) 324, 1063
AfaI GTAC 6 cut(s) 272, 368, 930, 1110, 1258, 1857
AfiI CCNNNNNNNGG 2 cut(s) 478, 1004
AflIII ACRYGT 2 cut(s) 7, 1431
AgsI TTSAA 7 cut(s) 878, 969, 1143, 1181, 1303, 1407, 1714
AjiI CACGTC 3 cut(s) 148, 241, 249
AjnI CCWGG 4 cut(s) 23, 210, 581, 1723
AjuI GAANNNNNNNTTGG 2 cut(s) 833, 865
Alw26I GTCTC 7 cut(s) 62, 120, 180, 231, 988, 1165, 1788
AlwI GGATC 2 cut(s) 578, 1195
Ama87I CYCGRG 2 cut(s) 1490, 1499
AoxI GGCC 5 cut(s) 150, 297, 579, 1327, 1606
ApaI GGGCCC 1 cut(s) 1610
ApeKI GCWGC 5 cut(s) 1232, 1344, 1583, 1676, 1720
ApoI RAATTY 1 cut(s) 1873
AspLEI GCGC 4 cut(s) 137, 477, 559, 745
AspS9I GGNCC 6 cut(s) 298, 627, 1327, 1503, 1606, 1607
AsuC2I CCSGG 2 cut(s) 301, 1573
AsuHPI GGTGA 6 cut(s) 21, 163, 256, 271, 433, 1787
AsuNHI GCTAGC 1 cut(s) 1579
AvaI CYCGRG 2 cut(s) 1490, 1499
AvaII GGWCC 2 cut(s) 627, 1503
BaeGI GKGCMC 1 cut(s) 1610
BalI TGGCCA 1 cut(s) 152
BanII GRGCYC 2 cut(s) 1534, 1610
BbrPI CACGTG 2 cut(s) 345, 1434
BbvI GCAGC 5 cut(s) 1244, 1356, 1570, 1663, 1732
BccI CCATC 5 cut(s) 721, 814, 929, 1178, 1394
BceAI ACGGC 5 cut(s) 205, 282, 311, 366, 564
BcgI CGANNNNNNTGC 2 cut(s) 443, 477
BciT130I CCWGG 4 cut(s) 25, 212, 583, 1725
BciVI GTATCC 1 cut(s) 1561
BclI TGATCA 5 cut(s) 168, 261, 339, 915, 1552
BcnI CCSGG 2 cut(s) 301, 1573
BcoDI GTCTC 7 cut(s) 62, 120, 180, 231, 988, 1165, 1788
BfaI CTAG 5 cut(s) 675, 1043, 1167, 1580, 1653
BfmI CTRYAG 1 cut(s) 1584
BfoI RGCGCY 1 cut(s) 138
BfuI GTATCC 1 cut(s) 1561
BglI GCCNNNNNGGC 1 cut(s) 189
BglII AGATCT 1 cut(s) 1655
BisI GCNGC 8 cut(s) 119, 884, 1233, 1289, 1345, 1584, 1677, 1721
BlpI GCTNAGC 1 cut(s) 179
BlsI GCNGC 8 cut(s) 120, 885, 1234, 1290, 1346, 1585, 1678, 1722
Bme1390I CCNGG 6 cut(s) 25, 212, 301, 583, 1573, 1725
Bme18I GGWCC 2 cut(s) 627, 1503
BmeT110I CYCGRG 2 cut(s) 1490, 1499
BmgBI CACGTC 3 cut(s) 148, 241, 249
BmgT120I GGNCC 6 cut(s) 298, 627, 1327, 1503, 1606, 1607
BmiI GGNNCC 4 cut(s) 305, 470, 1504, 1608
BmrFI CCNGG 6 cut(s) 25, 212, 301, 583, 1573, 1725
BmsI GCATC 9 cut(s) 498, 591, 684, 777, 1029, 1081, 1241, 1526, 1606
BmtI GCTAGC 1 cut(s) 1583
BplI GAGNNNNNCTC 2 cut(s) 1145, 1177
BpmI CTGGAG 3 cut(s) 311, 779, 791
Bpu1102I GCTNAGC 1 cut(s) 179
BpuEI CTTGAG 4 cut(s) 33, 407, 1045, 1454
BpuMI CCSGG 2 cut(s) 301, 1573
BsaAI YACGTR 2 cut(s) 345, 1434
BsaHI GRCGYC 2 cut(s) 324, 1063
BsaI GGTCTC 2 cut(s) 120, 988
BsaJI CCNNGG 1 cut(s) 698
BsaWI WCCGGW 1 cut(s) 281
BsaXI ACNNNNNCTCC 2 cut(s) 845, 875
Bsc4I CCNNNNNNNGG 2 cut(s) 478, 1004
Bse118I RCCGGY 2 cut(s) 418, 471
Bse3DI GCAATG 2 cut(s) 566, 639
BseBI CCWGG 4 cut(s) 25, 212, 583, 1725
BseDI CCNNGG 1 cut(s) 698
BseGI GGATG 8 cut(s) 487, 513, 619, 699, 792, 1256, 1550, 1856
BseLI CCNNNNNNNGG 2 cut(s) 478, 1004
BseMI GCAATG 2 cut(s) 566, 639
BseMII CTCAG 6 cut(s) 73, 193, 222, 368, 387, 1251
BseRI GAGGAG 6 cut(s) 308, 404, 481, 590, 715, 776
BseSI GKGCMC 1 cut(s) 1610
BseXI GCAGC 5 cut(s) 1244, 1356, 1570, 1663, 1732
BsgI GTGCAG 2 cut(s) 1107, 1797
Bsh1236I CGCG 1 cut(s) 477
BshFI GGCC 5 cut(s) 152, 299, 581, 1329, 1608
BsiHKCI CYCGRG 2 cut(s) 1490, 1499
BsiSI CCGG 8 cut(s) 282, 301, 419, 472, 512, 605, 791, 1572
BsiWI CGTACG 1 cut(s) 270
BslFI GGGAC 4 cut(s) 48, 812, 1074, 1516
BslI CCNNNNNNNGG 2 cut(s) 478, 1004
BsmAI GTCTC 7 cut(s) 62, 120, 180, 231, 988, 1165, 1788
BsmBI CGTCTC 3 cut(s) 62, 180, 231
BsmFI GGGAC 4 cut(s) 48, 812, 1074, 1516
BsmI GAATGC 1 cut(s) 727
BsnI GGCC 5 cut(s) 152, 299, 581, 1329, 1608
Bso31I GGTCTC 2 cut(s) 120, 988
BsoBI CYCGRG 2 cut(s) 1490, 1499
Bsp120I GGGCCC 1 cut(s) 1606
Bsp1286I GDGCHC 2 cut(s) 1534, 1610
Bsp1407I TGTACA 2 cut(s) 928, 1108
Bsp1720I GCTNAGC 1 cut(s) 179
BspANI GGCC 5 cut(s) 152, 299, 581, 1329, 1608
BspCNI CTCAG 6 cut(s) 72, 192, 223, 369, 388, 1252
BspFNI CGCG 1 cut(s) 477
BspLI GGNNCC 4 cut(s) 305, 470, 1504, 1608
BspMAI CTGCAG 1 cut(s) 1588
BspOI GCTAGC 1 cut(s) 1583
BspPI GGATC 2 cut(s) 578, 1195
BspQI GCTCTTC 1 cut(s) 1539
BspTNI GGTCTC 2 cut(s) 120, 988
BsrBI CCGCTC 1 cut(s) 856
BsrDI GCAATG 2 cut(s) 566, 639
BsrFI RCCGGY 2 cut(s) 418, 471
BsrGI TGTACA 2 cut(s) 928, 1108
BssAI RCCGGY 2 cut(s) 418, 471
BssECI CCNNGG 1 cut(s) 698
BssNI GRCGYC 2 cut(s) 324, 1063
Bst2UI CCWGG 4 cut(s) 25, 212, 583, 1725
Bst4CI ACNGT 6 cut(s) 259, 458, 541, 1093, 1790, 1823
Bst6I CTCTTC 4 cut(s) 314, 942, 1539, 1878
BstACI GRCGYC 2 cut(s) 324, 1063
BstAPI GCANNNNNTGC 1 cut(s) 1238
BstAUI TGTACA 2 cut(s) 928, 1108
BstBAI YACGTR 2 cut(s) 345, 1434
BstC8I GCNNGC 7 cut(s) 139, 208, 473, 858, 1342, 1581, 1621
BstDEI CTNAG 7 cut(s) 59, 179, 231, 377, 396, 1260, 1438
BstEII GGTNACC 1 cut(s) 27
BstF5I GGATG 8 cut(s) 487, 513, 619, 699, 792, 1256, 1550, 1856
BstFNI CGCG 1 cut(s) 477
BstH2I RGCGCY 1 cut(s) 138
BstHHI GCGC 4 cut(s) 137, 477, 559, 745
BstMAI GTCTC 7 cut(s) 62, 120, 180, 231, 988, 1165, 1788
BstMWI GCNNNNNNNGC 5 cut(s) 189, 382, 638, 1238, 1538
BstNI CCWGG 4 cut(s) 25, 212, 583, 1725
BstNSI RCATGY 4 cut(s) 11, 805, 1344, 1763
BstPI GGTNACC 1 cut(s) 27
BstSCI CCNGG 6 cut(s) 23, 210, 299, 581, 1571, 1723
BstSFI CTRYAG 1 cut(s) 1584
BstSLI GKGCMC 1 cut(s) 1610
BstUI CGCG 1 cut(s) 477
BstV1I GCAGC 5 cut(s) 1244, 1356, 1570, 1663, 1732
BstX2I RGATCY 1 cut(s) 1655
BstYI RGATCY 1 cut(s) 1655
BsuI GTATCC 1 cut(s) 1561
BsuRI GGCC 5 cut(s) 152, 299, 581, 1329, 1608
BtgZI GCGATG 1 cut(s) 740
BtrI CACGTC 3 cut(s) 148, 241, 249
BtsCI GGATG 8 cut(s) 487, 513, 619, 699, 792, 1256, 1550, 1856
BtsIMutI CAGTG 3 cut(s) 953, 1098, 1786
Cac8I GCNNGC 7 cut(s) 139, 208, 473, 858, 1342, 1581, 1621
CfoI GCGC 4 cut(s) 137, 477, 559, 745
Cfr10I RCCGGY 2 cut(s) 418, 471
Cfr13I GGNCC 6 cut(s) 298, 627, 1327, 1503, 1606, 1607
CseI GACGC 1 cut(s) 332
Csp6I GTAC 6 cut(s) 271, 367, 929, 1109, 1257, 1856
CspCI CAANNNNNGTGG 2 cut(s) 957, 992
CviAII CATG 9 cut(s) 8, 85, 802, 1247, 1341, 1349, 1564, 1760, 1880
CviQI GTAC 6 cut(s) 271, 367, 929, 1109, 1257, 1856
DdeI CTNAG 7 cut(s) 59, 179, 231, 377, 396, 1260, 1438
DraI TTTAAA 2 cut(s) 1374, 1599
EaeI YGGCCR 1 cut(s) 150
Eam1104I CTCTTC 4 cut(s) 314, 942, 1539, 1878
EarI CTCTTC 4 cut(s) 314, 942, 1539, 1878
EciI GGCGGA 1 cut(s) 1379
Eco24I GRGCYC 2 cut(s) 1534, 1610
Eco31I GGTCTC 2 cut(s) 120, 988
Eco47I GGWCC 2 cut(s) 627, 1503
Eco72I CACGTG 2 cut(s) 345, 1434
Eco88I CYCGRG 2 cut(s) 1490, 1499
Eco91I GGTNACC 1 cut(s) 27
EcoO109I RGGNCCY 1 cut(s) 1606
EcoO65I GGTNACC 1 cut(s) 27
EcoRII CCWGG 4 cut(s) 23, 210, 581, 1723
EcoT22I ATGCAT 1 cut(s) 1074
EcoT38I GRGCYC 2 cut(s) 1534, 1610
Esp3I CGTCTC 3 cut(s) 62, 180, 231
FaeI CATG 9 cut(s) 11, 88, 805, 1250, 1344, 1352, 1567, 1763, 1883
FaqI GGGAC 4 cut(s) 48, 812, 1074, 1516
FatI CATG 9 cut(s) 7, 84, 801, 1246, 1340, 1348, 1563, 1759, 1879
FauI CCCGC 4 cut(s) 215, 356, 634, 849
FbaI TGATCA 5 cut(s) 168, 261, 339, 915, 1552
Fnu4HI GCNGC 8 cut(s) 119, 884, 1233, 1289, 1345, 1584, 1677, 1721
FokI GGATG 8 cut(s) 494, 520, 626, 706, 799, 1263, 1557, 1863
FriOI GRGCYC 2 cut(s) 1534, 1610
Fsp4HI GCNGC 8 cut(s) 119, 884, 1233, 1289, 1345, 1584, 1677, 1721
FspBI CTAG 5 cut(s) 675, 1043, 1167, 1580, 1653
FspI TGCGCA 1 cut(s) 744
GlaI GCGC 4 cut(s) 136, 476, 558, 744
GluI GCNGC 8 cut(s) 119, 884, 1233, 1289, 1345, 1584, 1677, 1721
GsuI CTGGAG 3 cut(s) 311, 779, 791
HaeII RGCGCY 1 cut(s) 138
HaeIII GGCC 5 cut(s) 152, 299, 581, 1329, 1608
HapII CCGG 8 cut(s) 282, 301, 419, 472, 512, 605, 791, 1572
HgaI GACGC 1 cut(s) 332
HhaI GCGC 4 cut(s) 137, 477, 559, 745
Hin1I GRCGYC 2 cut(s) 324, 1063
Hin1II CATG 9 cut(s) 11, 88, 805, 1250, 1344, 1352, 1567, 1763, 1883
Hin6I GCGC 4 cut(s) 135, 475, 557, 743
HinP1I GCGC 4 cut(s) 135, 475, 557, 743
HindIII AAGCTT 1 cut(s) 1592
HinfI GANTC 2 cut(s) 108, 195
HpaII CCGG 8 cut(s) 282, 301, 419, 472, 512, 605, 791, 1572
HphI GGTGA 6 cut(s) 21, 163, 256, 271, 433, 1787
Hpy166II GTNNAC 7 cut(s) 252, 348, 627, 906, 1109, 1826, 1856
Hpy188I TCNGA 4 cut(s) 145, 200, 840, 1077
Hpy188III TCNNGA 7 cut(s) 651, 770, 1024, 1100, 1490, 1492, 1501
Hpy8I GTNNAC 7 cut(s) 252, 348, 627, 906, 1109, 1826, 1856
Hpy99I CGWCG 5 cut(s) 149, 224, 259, 326, 458
HpyAV CCTTC 3 cut(s) 375, 816, 1340
HpyCH4III ACNGT 6 cut(s) 259, 458, 541, 1093, 1790, 1823
HpyCH4IV ACGT 7 cut(s) 147, 240, 248, 273, 344, 1063, 1433
HpyF10VI GCNNNNNNNGC 5 cut(s) 189, 382, 638, 1238, 1538
HpyF3I CTNAG 7 cut(s) 59, 179, 231, 377, 396, 1260, 1438
HpySE526I ACGT 7 cut(s) 147, 240, 248, 273, 344, 1063, 1433
Hsp92I GRCGYC 2 cut(s) 324, 1063
Hsp92II CATG 9 cut(s) 11, 88, 805, 1250, 1344, 1352, 1567, 1763, 1883
HspAI GCGC 4 cut(s) 135, 475, 557, 743
KroI GCCGGC 1 cut(s) 471
KroNI GCCGGC 1 cut(s) 473
Ksp22I TGATCA 5 cut(s) 168, 261, 339, 915, 1552
LguI GCTCTTC 1 cut(s) 1539
LmnI GCTCC 4 cut(s) 146, 303, 468, 853
Lsp1109I GCAGC 5 cut(s) 1244, 1356, 1570, 1663, 1732
LweI GCATC 9 cut(s) 498, 591, 684, 777, 1029, 1081, 1241, 1526, 1606
MaeI CTAG 5 cut(s) 675, 1043, 1167, 1580, 1653
MaeII ACGT 7 cut(s) 147, 240, 248, 273, 344, 1063, 1433
MaeIII GTNAC 7 cut(s) 27, 244, 730, 823, 1037, 1315, 1625
MbiI CCGCTC 1 cut(s) 856
MfeI CAATTG 1 cut(s) 160
MflI RGATCY 1 cut(s) 1655
MhlI GDGCHC 2 cut(s) 1534, 1610
MlsI TGGCCA 1 cut(s) 152
MluCI AATT 9 cut(s) 160, 1083, 1266, 1292, 1522, 1663, 1864, 1873, 1893
MluNI TGGCCA 1 cut(s) 152
MmeI TCCRAC 4 cut(s) 168, 471, 1715, 1726
Mox20I TGGCCA 1 cut(s) 152
Mph1103I ATGCAT 1 cut(s) 1074
MroNI GCCGGC 1 cut(s) 471
MscI TGGCCA 1 cut(s) 152
MseI TTAA 6 cut(s) 1086, 1269, 1373, 1395, 1598, 1692
MslI CAYNNNNRTG 1 cut(s) 1133
Msp20I TGGCCA 1 cut(s) 152
MspI CCGG 8 cut(s) 282, 301, 419, 472, 512, 605, 791, 1572
MspR9I CCNGG 6 cut(s) 25, 212, 301, 583, 1573, 1725
MunI CAATTG 1 cut(s) 160
Mva1269I GAATGC 1 cut(s) 727
MvaI CCWGG 4 cut(s) 25, 212, 583, 1725
MvnI CGCG 1 cut(s) 477
MwoI GCNNNNNNNGC 5 cut(s) 189, 382, 638, 1238, 1538
NaeI GCCGGC 1 cut(s) 473
NciI CCSGG 2 cut(s) 301, 1573
NgoMIV GCCGGC 1 cut(s) 471
NheI GCTAGC 1 cut(s) 1579
NlaIII CATG 9 cut(s) 11, 88, 805, 1250, 1344, 1352, 1567, 1763, 1883
NlaIV GGNNCC 4 cut(s) 305, 470, 1504, 1608
NmeAIII GCCGAG 2 cut(s) 209, 723
NmuCI GTSAC 3 cut(s) 27, 244, 730
NsbI TGCGCA 1 cut(s) 744
NsiI ATGCAT 1 cut(s) 1074
NspI RCATGY 4 cut(s) 11, 805, 1344, 1763
PaeI GCATGC 1 cut(s) 1344
PaeR7I CTCGAG 1 cut(s) 1490
PciI ACATGT 1 cut(s) 7
PciSI GCTCTTC 1 cut(s) 1539
PcsI WCGNNNNNNNCGW 4 cut(s) 318, 350, 722, 815
PctI GAATGC 1 cut(s) 727
PdiI GCCGGC 1 cut(s) 473
PfeI GAWTC 2 cut(s) 108, 195
Pfl23II CGTACG 1 cut(s) 270
PkrI GCNGC 8 cut(s) 120, 885, 1234, 1290, 1346, 1585, 1678, 1722
PmaCI CACGTG 2 cut(s) 345, 1434
PmlI CACGTG 2 cut(s) 345, 1434
Ppu21I YACGTR 2 cut(s) 345, 1434
PscI ACATGT 1 cut(s) 7
Psp6I CCWGG 4 cut(s) 23, 210, 581, 1723
PspCI CACGTG 2 cut(s) 345, 1434
PspEI GGTNACC 1 cut(s) 27
PspGI CCWGG 4 cut(s) 23, 210, 581, 1723
PspLI CGTACG 1 cut(s) 270
PspN4I GGNNCC 4 cut(s) 305, 470, 1504, 1608
PspOMI GGGCCC 1 cut(s) 1606
PspPI GGNCC 6 cut(s) 298, 627, 1327, 1503, 1606, 1607
PstI CTGCAG 1 cut(s) 1588
PsuI RGATCY 1 cut(s) 1655
RsaI GTAC 6 cut(s) 272, 368, 930, 1110, 1258, 1857
RsaNI GTAC 6 cut(s) 271, 367, 929, 1109, 1257, 1856
RseI CAYNNNNRTG 1 cut(s) 1133
SapI GCTCTTC 1 cut(s) 1539
SaqAI TTAA 6 cut(s) 1086, 1269, 1373, 1395, 1598, 1692
SatI GCNGC 8 cut(s) 119, 884, 1233, 1289, 1345, 1584, 1677, 1721
Sau96I GGNCC 6 cut(s) 298, 627, 1327, 1503, 1606, 1607
ScrFI CCNGG 6 cut(s) 25, 212, 301, 583, 1573, 1725
SduI GDGCHC 2 cut(s) 1534, 1610
SfaNI GCATC 9 cut(s) 498, 591, 684, 777, 1029, 1081, 1241, 1526, 1606
SfcI CTRYAG 1 cut(s) 1584
Sfr274I CTCGAG 1 cut(s) 1490
SinI GGWCC 2 cut(s) 627, 1503
SlaI CTCGAG 1 cut(s) 1490
SmiMI CAYNNNNRTG 1 cut(s) 1133
SmlI CTYRAG 5 cut(s) 48, 386, 1024, 1469, 1490
SmoI CTYRAG 5 cut(s) 48, 386, 1024, 1469, 1490
SphI GCATGC 1 cut(s) 1344
Sse9I AATT 9 cut(s) 160, 1083, 1266, 1292, 1522, 1663, 1864, 1873, 1893
SspMI CTAG 5 cut(s) 675, 1043, 1167, 1580, 1653
StyD4I CCNGG 6 cut(s) 23, 210, 299, 581, 1571, 1723
TaaI ACNGT 6 cut(s) 259, 458, 541, 1093, 1790, 1823
TaiI ACGT 7 cut(s) 150, 243, 251, 276, 347, 1066, 1436
TaqI TCGA 9 cut(s) 219, 312, 453, 573, 650, 687, 1190, 1456, 1491
TasI AATT 9 cut(s) 160, 1083, 1266, 1292, 1522, 1663, 1864, 1873, 1893
TatI WGTACW 2 cut(s) 928, 1108
TauI GCSGC 3 cut(s) 121, 886, 1291
TfiI GAWTC 2 cut(s) 108, 195
Tru1I TTAA 6 cut(s) 1086, 1269, 1373, 1395, 1598, 1692
Tru9I TTAA 6 cut(s) 1086, 1269, 1373, 1395, 1598, 1692
TscAI CASTG 3 cut(s) 960, 1098, 1793
TseFI GTSAC 3 cut(s) 27, 244, 730
TseI GCWGC 5 cut(s) 1232, 1344, 1583, 1676, 1720
Tsp45I GTSAC 3 cut(s) 27, 244, 730
TspDTI ATGAA 6 cut(s) 960, 1296, 1712, 1853, 1886, 1896
TspRI CASTG 3 cut(s) 960, 1098, 1793
VpaK11BI GGWCC 2 cut(s) 627, 1503
XapI RAATTY 1 cut(s) 1873
XceI RCATGY 4 cut(s) 11, 805, 1344, 1763
XcmI CCANNNNNNNNNTGG 1 cut(s) 145
XhoI CTCGAG 1 cut(s) 1490
XspI CTAG 5 cut(s) 675, 1043, 1167, 1580, 1653
ZraI GACGTC 1 cut(s) 1064
Zsp2I ATGCAT 1 cut(s) 1074
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.