Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000907.1

Orthogroup ID

OG0012039

Physical Location & Seq

Genomic Coordinates Reverse (-)

23840 .. 25627

Gene Structure 1788 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000907.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1788 bp

atgccggacagagactacagtgccagctccgacgtggccaagtctaactggctgatcacgaagctcagcagagacggcaaagttggagaagcccgccaggtgttcgacgaaatgcgtgagagagacgtggtgacgtggacgacggtgatcacggcgtacatcaagtgcgggatggtggaggaggccaggaggctgtttgatagacccgatgctgagaagaatgtcatcacttggactgccttggttggcgggtatgtaaggctgagacggattaaggaggctgagtggttgttctatcaaatgccggtcaggaatgtggtttcttggaacactatgattgatgggtacgcgaggagccggcaggttgatcaggcgttggagttgtttgagaggatgccggagaggaatgtggtttcttggaacacggttttgacggctctggcgcaatgcgggaagattgaggaggccaggaggttgtttggtttgatgccggaaagggatgttatttcgtggaccgcaatggttgcggggttttcaagaaatggcaggatcgatgaagctagagaagtttttgataggatgcctagaaggaatgtggtctcgtggaatgcaatgatcacgggttatgctcagaatgggaggctggaggaagctcttgaactttttgagaggatgccagagagggacatgtcttcgtggaatacgatggttactggctttattcagaatggggatttaaagcgcgcgtgggacttgtttattcaaatgccacagaagaatgtcatatcatggactacaatgatcactgggtatgtacaagatgggagaaatgaagatgcattgatgatcttttcgaaaatggtggctgataatggggtgagacctaatcagggaacttttgtcagtatcttgagtgcttgtagtaacttagctggtctttgtgagggacgtcaaatacatcagatgataactaaaacagtttatcaggaatgtgtacatttggtgtctgcacttataaatatgtattcaaaatgtggtgagttagtctctgctaggaagatgtttgaagatggatcgacaatccatagggattttatctcctggaatggaatgattgcagcctatgcacatcatggatgtggtattgaggcaattaacttgtataatgaaatgcgacaattggggtgcaaacctgatgatgttacttatgtggggctgctttctgcatgcagccatgctggtttggtggaggagggactaaatctttttgatgagcttcttagagatgggtcaatacaagtgagggaagatcattacacttgcttagttgatctttgtggtcgagcagggaggctgaaggaggcttttgacatccttgagaaacttgggaccaacccatcagcatcaaattggggggctcttcttgctggatgtattgatcatcgtaacatggatacagggaagctagctgctgagaagcttttaaaggagggaccagatgatgcaggcagttactcgttgttgtggaacttttatgctagatctgggaattggagagaagctgcaaagatgaggattaaaatgaaagagaaggggttgaaaaagcagcctggttgcagttggatagaaattggaaatatggtgcatgtgtttgtggtcggtgataagtctcattgccaatctcaacctatatattctgcacttcacgatttacataaacaaatggagaagattgggtatgtaccaagaaatgatttgaatgtggatgaagatatttcaattacataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR

Protein Analysis

595

Amino Acids

67.56

Weight (kDa)

6.13

Isoelectric Point (pI)

37.08

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012039)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35030
fragaria_vesca	FvH4_7g06880 FvH4_7g06880
prunus_persica	Prupe.7G042800_v2.0.a1
pyrus_communis	pycom12g07780
rosa_chinensis	RchiOBHm_Chr1g0336641 RchiOBHm_Chr1g0336671
rosa_laevigata	RLG00000029341 RLG00000029342
rosa_multiflora	Rmu_co8277885.1_g000001 Rmu_sc0000907.1_g000005 Rmu_sc0000907.1_g000007
rosa_roxburghii	Rroxscaffold_4G00315400
rosa_rugosa	Rorug01G0127400 Rorug04G0097200
rosa_samantha	Rh1AG148300 Rh1BG116300 Rh1CG139700
rosa_wichuraiana	Rw1G011980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1016
AatII	GACGTC	1 cut(s)	952
Acc36I	ACCTGC	1 cut(s)	352
AccII	CGCG	3 cut(s)	350, 744, 746
AciI	CCGC	6 cut(s)	94, 168, 249, 450, 516, 527
AclWI	GGATC	2 cut(s)	557, 1081
AcoI	YGGCCR	1 cut(s)	36
AcuI	CTGAAG	1 cut(s)	1376
AcyI	GRCGYC	1 cut(s)	949
AfaI	GTAC	5 cut(s)	158, 347, 816, 996, 1743
AfiI	CCNNNNNNNGG	1 cut(s)	890
AflIII	ACRYGT	1 cut(s)	687
AgsI	TTSAA	8 cut(s)	537, 659, 764, 1029, 1067, 1600, 1759, 1779
AjiI	CACGTC	3 cut(s)	34, 127, 135
AjnI	CCWGG	5 cut(s)	96, 185, 467, 1100, 1609
Alw26I	GTCTC	8 cut(s)	6, 66, 117, 259, 604, 874, 1051, 1674
AlwI	GGATC	2 cut(s)	557, 1081
AoxI	GGCC	3 cut(s)	36, 183, 465
ApeKI	GCWGC	6 cut(s)	1118, 1216, 1230, 1469, 1562, 1606
AspLEI	GCGC	3 cut(s)	445, 744, 746
AspS9I	GGNCC	3 cut(s)	513, 1389, 1493
AsuHPI	GGTGA	5 cut(s)	142, 157, 889, 1049, 1673
AsuII	TTCGAA	1 cut(s)	854
AsuNHI	GCTAGC	1 cut(s)	1465
AvaII	GGWCC	3 cut(s)	513, 1389, 1493
BalI	TGGCCA	1 cut(s)	38
BanII	GRGCYC	1 cut(s)	1420
BauI	CACGAG	1 cut(s)	601
BbsI	GAAGAC	1 cut(s)	684
BbvI	GCAGC	6 cut(s)	1130, 1203, 1242, 1456, 1549, 1618
BccI	CCATC	7 cut(s)	166, 335, 700, 815, 1064, 1280, 1405
BceAI	ACGGC	3 cut(s)	91, 168, 450
BciT130I	CCWGG	5 cut(s)	98, 187, 469, 1102, 1611
BciVI	GTATCC	1 cut(s)	1447
BclI	TGATCA	6 cut(s)	54, 147, 367, 615, 801, 1438
BcoDI	GTCTC	8 cut(s)	6, 66, 117, 259, 604, 874, 1051, 1674
BfaI	CTAG	5 cut(s)	561, 585, 1053, 1466, 1539
BfmI	CTRYAG	1 cut(s)	16
BfuAI	ACCTGC	1 cut(s)	352
BfuI	GTATCC	1 cut(s)	1447
BglII	AGATCT	1 cut(s)	1541
BisI	GCNGC	6 cut(s)	1119, 1217, 1231, 1470, 1563, 1607
BlpI	GCTNAGC	1 cut(s)	65
BlsI	GCNGC	6 cut(s)	1120, 1218, 1232, 1471, 1564, 1608
Bme1390I	CCNGG	5 cut(s)	98, 187, 469, 1102, 1611
Bme18I	GGWCC	3 cut(s)	513, 1389, 1493
BmgBI	CACGTC	3 cut(s)	34, 127, 135
BmgT120I	GGNCC	3 cut(s)	513, 1389, 1493
BmiI	GGNNCC	3 cut(s)	356, 1390, 1494
BmrFI	CCNGG	5 cut(s)	98, 187, 469, 1102, 1611
BmrI	ACTGGG	1 cut(s)	816
BmsI	GCATC	8 cut(s)	199, 384, 477, 570, 663, 826, 1412, 1492
BmtI	GCTAGC	1 cut(s)	1469
BmuI	ACTGGG	1 cut(s)	816
BpiI	GAAGAC	1 cut(s)	684
BplI	GAGNNNNNCTC	2 cut(s)	1031, 1063
BpmI	CTGGAG	1 cut(s)	665
Bpu1102I	GCTNAGC	1 cut(s)	65
Bpu14I	TTCGAA	1 cut(s)	854
BpuEI	CTTGAG	2 cut(s)	931, 1397
Bsa29I	ATCGAT	1 cut(s)	552
BsaHI	GRCGYC	1 cut(s)	949
BsaI	GGTCTC	2 cut(s)	604, 874
BsaJI	CCNNGG	1 cut(s)	240
BsaXI	ACNNNNNCTCC	2 cut(s)	269, 299
Bsc4I	CCNNNNNNNGG	1 cut(s)	890
Bse118I	RCCGGY	2 cut(s)	304, 357
Bse1I	ACTGG	3 cut(s)	53, 718, 811
Bse3DI	GCAATG	4 cut(s)	452, 525, 618, 1672
BseBI	CCWGG	5 cut(s)	98, 187, 469, 1102, 1611
BseCI	ATCGAT	1 cut(s)	552
BseDI	CCNNGG	1 cut(s)	240
BseGI	GGATG	9 cut(s)	177, 399, 505, 585, 678, 1142, 1371, 1436, 1771
BseLI	CCNNNNNNNGG	1 cut(s)	890
BseMI	GCAATG	4 cut(s)	452, 525, 618, 1672
BseMII	CTCAG	6 cut(s)	79, 204, 254, 273, 644, 1464
BseNI	ACTGG	3 cut(s)	53, 718, 811
BsePI	GCGCGC	1 cut(s)	742
BseRI	GAGGAG	4 cut(s)	194, 367, 476, 1265
BseXI	GCAGC	6 cut(s)	1130, 1203, 1242, 1456, 1549, 1618
BsgI	GTGCAG	2 cut(s)	993, 1683
Bsh1236I	CGCG	3 cut(s)	350, 744, 746
BshFI	GGCC	3 cut(s)	38, 185, 467
BshVI	ATCGAT	1 cut(s)	552
BsiSI	CCGG	5 cut(s)	5, 305, 358, 398, 491
BslFI	GGGAC	6 cut(s)	698, 764, 960, 1269, 1402, 1506
BslI	CCNNNNNNNGG	1 cut(s)	890
BsmAI	GTCTC	8 cut(s)	6, 66, 117, 259, 604, 874, 1051, 1674
BsmBI	CGTCTC	3 cut(s)	66, 117, 259
BsmFI	GGGAC	6 cut(s)	698, 764, 960, 1269, 1402, 1506
BsmI	GAATGC	1 cut(s)	613
BsnI	GGCC	3 cut(s)	38, 185, 467
Bso31I	GGTCTC	2 cut(s)	604, 874
Bsp119I	TTCGAA	1 cut(s)	854
Bsp1286I	GDGCHC	1 cut(s)	1420
Bsp1407I	TGTACA	2 cut(s)	814, 994
Bsp1720I	GCTNAGC	1 cut(s)	65
BspACI	CCGC	6 cut(s)	94, 168, 249, 450, 516, 527
BspANI	GGCC	3 cut(s)	38, 185, 467
BspCNI	CTCAG	6 cut(s)	78, 205, 255, 274, 643, 1465
BspDI	ATCGAT	1 cut(s)	552
BspFNI	CGCG	3 cut(s)	350, 744, 746
BspLI	GGNNCC	3 cut(s)	356, 1390, 1494
BspMI	ACCTGC	1 cut(s)	352
BspOI	GCTAGC	1 cut(s)	1469
BspPI	GGATC	2 cut(s)	557, 1081
BspQI	GCTCTTC	1 cut(s)	1425
BspT104I	TTCGAA	1 cut(s)	854
BspTNI	GGTCTC	2 cut(s)	604, 874
BsrDI	GCAATG	4 cut(s)	452, 525, 618, 1672
BsrFI	RCCGGY	2 cut(s)	304, 357
BsrGI	TGTACA	2 cut(s)	814, 994
BsrI	ACTGG	3 cut(s)	53, 718, 811
BssAI	RCCGGY	2 cut(s)	304, 357
BssECI	CCNNGG	1 cut(s)	240
BssHII	GCGCGC	1 cut(s)	742
BssNI	GRCGYC	1 cut(s)	949
BssSI	CACGAG	1 cut(s)	601
BssT1I	CCWWGG	1 cut(s)	240
Bst2BI	CACGAG	1 cut(s)	601
Bst2UI	CCWGG	5 cut(s)	98, 187, 469, 1102, 1611
Bst4CI	ACNGT	4 cut(s)	20, 145, 427, 979
Bst6I	CTCTTC	1 cut(s)	1425
BstACI	GRCGYC	1 cut(s)	949
BstAPI	GCANNNNNTGC	2 cut(s)	524, 1124
BstAUI	TGTACA	2 cut(s)	814, 994
BstBI	TTCGAA	1 cut(s)	854
BstC8I	GCNNGC	7 cut(s)	25, 94, 359, 744, 1228, 1467, 1507
BstDEI	CTNAG	9 cut(s)	65, 213, 263, 282, 630, 928, 1280, 1324, 1473
BstF5I	GGATG	9 cut(s)	177, 399, 505, 585, 678, 1142, 1371, 1436, 1771
BstFNI	CGCG	3 cut(s)	350, 744, 746
BstHHI	GCGC	3 cut(s)	445, 744, 746
BstMAI	GTCTC	8 cut(s)	6, 66, 117, 259, 604, 874, 1051, 1674
BstMWI	GCNNNNNNNGC	4 cut(s)	75, 524, 1124, 1424
BstNI	CCWGG	5 cut(s)	98, 187, 469, 1102, 1611
BstNSI	RCATGY	3 cut(s)	691, 1230, 1649
BstSCI	CCNGG	5 cut(s)	96, 185, 467, 1100, 1609
BstSFI	CTRYAG	1 cut(s)	16
BstUI	CGCG	3 cut(s)	350, 744, 746
BstV1I	GCAGC	6 cut(s)	1130, 1203, 1242, 1456, 1549, 1618
BstV2I	GAAGAC	1 cut(s)	684
BstX2I	RGATCY	1 cut(s)	1541
BstYI	RGATCY	1 cut(s)	1541
Bsu15I	ATCGAT	1 cut(s)	552
BsuI	GTATCC	1 cut(s)	1447
BsuRI	GGCC	3 cut(s)	38, 185, 467
BsuTUI	ATCGAT	1 cut(s)	552
BtrI	CACGTC	3 cut(s)	34, 127, 135
BtsCI	GGATG	9 cut(s)	177, 399, 505, 585, 678, 1142, 1371, 1436, 1771
BtsIMutI	CAGTG	2 cut(s)	25, 804
BveI	ACCTGC	1 cut(s)	352
Cac8I	GCNNGC	7 cut(s)	25, 94, 359, 744, 1228, 1467, 1507
CfoI	GCGC	3 cut(s)	445, 744, 746
Cfr10I	RCCGGY	2 cut(s)	304, 357
Cfr13I	GGNCC	3 cut(s)	513, 1389, 1493
ClaI	ATCGAT	1 cut(s)	552
Csp6I	GTAC	5 cut(s)	157, 346, 815, 995, 1742
CviAII	CATG	7 cut(s)	688, 789, 1133, 1227, 1235, 1450, 1646
CviQI	GTAC	5 cut(s)	157, 346, 815, 995, 1742
DdeI	CTNAG	9 cut(s)	65, 213, 263, 282, 630, 928, 1280, 1324, 1473
DraI	TTTAAA	2 cut(s)	738, 1485
EaeI	YGGCCR	1 cut(s)	36
Eam1104I	CTCTTC	1 cut(s)	1425
EarI	CTCTTC	1 cut(s)	1425
Eco130I	CCWWGG	1 cut(s)	240
Eco24I	GRGCYC	1 cut(s)	1420
Eco31I	GGTCTC	2 cut(s)	604, 874
Eco47I	GGWCC	3 cut(s)	513, 1389, 1493
Eco57I	CTGAAG	1 cut(s)	1376
EcoRII	CCWGG	5 cut(s)	96, 185, 467, 1100, 1609
EcoT14I	CCWWGG	1 cut(s)	240
EcoT22I	ATGCAT	1 cut(s)	841
EcoT38I	GRGCYC	1 cut(s)	1420
ErhI	CCWWGG	1 cut(s)	240
Esp3I	CGTCTC	3 cut(s)	66, 117, 259
FaeI	CATG	7 cut(s)	691, 792, 1136, 1230, 1238, 1453, 1649
FaqI	GGGAC	6 cut(s)	698, 764, 960, 1269, 1402, 1506
FatI	CATG	7 cut(s)	687, 788, 1132, 1226, 1234, 1449, 1645
FauI	CCCGC	5 cut(s)	101, 161, 242, 443, 520
FbaI	TGATCA	6 cut(s)	54, 147, 367, 615, 801, 1438
Fnu4HI	GCNGC	6 cut(s)	1119, 1217, 1231, 1470, 1563, 1607
FokI	GGATG	9 cut(s)	184, 406, 512, 592, 685, 1149, 1358, 1443, 1778
FriOI	GRGCYC	1 cut(s)	1420
Fsp4HI	GCNGC	6 cut(s)	1119, 1217, 1231, 1470, 1563, 1607
FspBI	CTAG	5 cut(s)	561, 585, 1053, 1466, 1539
GlaI	GCGC	3 cut(s)	444, 743, 745
GluI	GCNGC	6 cut(s)	1119, 1217, 1231, 1470, 1563, 1607
GsuI	CTGGAG	1 cut(s)	665
HaeIII	GGCC	3 cut(s)	38, 185, 467
HapII	CCGG	5 cut(s)	5, 305, 358, 398, 491
HhaI	GCGC	3 cut(s)	445, 744, 746
Hin1I	GRCGYC	1 cut(s)	949
Hin1II	CATG	7 cut(s)	691, 792, 1136, 1230, 1238, 1453, 1649
Hin6I	GCGC	3 cut(s)	443, 742, 744
HinP1I	GCGC	3 cut(s)	443, 742, 744
HindIII	AAGCTT	1 cut(s)	1478
HpaII	CCGG	5 cut(s)	5, 305, 358, 398, 491
HphI	GGTGA	5 cut(s)	142, 157, 889, 1049, 1673
Hpy166II	GTNNAC	3 cut(s)	138, 513, 995
Hpy188I	TCNGA	4 cut(s)	31, 633, 726, 963
Hpy188III	TCNNGA	7 cut(s)	58, 310, 537, 656, 910, 986, 1706
Hpy8I	GTNNAC	3 cut(s)	138, 513, 995
Hpy99I	CGWCG	3 cut(s)	35, 110, 145
HpyAV	CCTTC	3 cut(s)	582, 1351, 1585
HpyCH4III	ACNGT	4 cut(s)	20, 145, 427, 979
HpyCH4IV	ACGT	4 cut(s)	33, 126, 134, 949
HpyF10VI	GCNNNNNNNGC	4 cut(s)	75, 524, 1124, 1424
HpyF3I	CTNAG	9 cut(s)	65, 213, 263, 282, 630, 928, 1280, 1324, 1473
HpySE526I	ACGT	4 cut(s)	33, 126, 134, 949
Hsp92I	GRCGYC	1 cut(s)	949
Hsp92II	CATG	7 cut(s)	691, 792, 1136, 1230, 1238, 1453, 1649
HspAI	GCGC	3 cut(s)	443, 742, 744
KroI	GCCGGC	1 cut(s)	357
KroNI	GCCGGC	1 cut(s)	359
Ksp22I	TGATCA	6 cut(s)	54, 147, 367, 615, 801, 1438
LguI	GCTCTTC	1 cut(s)	1425
LmnI	GCTCC	2 cut(s)	32, 354
Lsp1109I	GCAGC	6 cut(s)	1130, 1203, 1242, 1456, 1549, 1618
LweI	GCATC	8 cut(s)	199, 384, 477, 570, 663, 826, 1412, 1492
MaeI	CTAG	5 cut(s)	561, 585, 1053, 1466, 1539
MaeII	ACGT	4 cut(s)	33, 126, 134, 949
MaeIII	GTNAC	6 cut(s)	130, 709, 923, 1201, 1445, 1511
MfeI	CAATTG	1 cut(s)	1178
MflI	RGATCY	1 cut(s)	1541
MhlI	GDGCHC	1 cut(s)	1420
MlsI	TGGCCA	1 cut(s)	38
MluCI	AATT	6 cut(s)	1152, 1178, 1408, 1549, 1629, 1779
MluNI	TGGCCA	1 cut(s)	38
MmeI	TCCRAC	4 cut(s)	54, 64, 357, 1601
Mox20I	TGGCCA	1 cut(s)	38
Mph1103I	ATGCAT	1 cut(s)	841
MroNI	GCCGGC	1 cut(s)	357
MscI	TGGCCA	1 cut(s)	38
MseI	TTAA	5 cut(s)	273, 737, 1155, 1484, 1578
MslI	CAYNNNNRTG	1 cut(s)	1137
Msp20I	TGGCCA	1 cut(s)	38
MspI	CCGG	5 cut(s)	5, 305, 358, 398, 491
MspR9I	CCNGG	5 cut(s)	98, 187, 469, 1102, 1611
MunI	CAATTG	1 cut(s)	1178
Mva1269I	GAATGC	1 cut(s)	613
MvaI	CCWGG	5 cut(s)	98, 187, 469, 1102, 1611
MvnI	CGCG	3 cut(s)	350, 744, 746
MwoI	GCNNNNNNNGC	4 cut(s)	75, 524, 1124, 1424
NaeI	GCCGGC	1 cut(s)	359
NgoMIV	GCCGGC	1 cut(s)	357
NheI	GCTAGC	1 cut(s)	1465
NlaIII	CATG	7 cut(s)	691, 792, 1136, 1230, 1238, 1453, 1649
NlaIV	GGNNCC	3 cut(s)	356, 1390, 1494
NmuCI	GTSAC	1 cut(s)	130
NsiI	ATGCAT	1 cut(s)	841
NspI	RCATGY	3 cut(s)	691, 1230, 1649
NspV	TTCGAA	1 cut(s)	854
PaeI	GCATGC	1 cut(s)	1230
PauI	GCGCGC	1 cut(s)	742
PciI	ACATGT	1 cut(s)	687
PciSI	GCTCTTC	1 cut(s)	1425
PcsI	WCGNNNNNNNCGW	1 cut(s)	701
PctI	GAATGC	1 cut(s)	613
PdiI	GCCGGC	1 cut(s)	359
PfoI	TCCNGGA	1 cut(s)	1100
PkrI	GCNGC	6 cut(s)	1120, 1218, 1232, 1471, 1564, 1608
PscI	ACATGT	1 cut(s)	687
PsiI	TTATAA	1 cut(s)	1016
Psp6I	CCWGG	5 cut(s)	96, 185, 467, 1100, 1609
PspGI	CCWGG	5 cut(s)	96, 185, 467, 1100, 1609
PspN4I	GGNNCC	3 cut(s)	356, 1390, 1494
PspPI	GGNCC	3 cut(s)	513, 1389, 1493
PsuI	RGATCY	1 cut(s)	1541
PteI	GCGCGC	1 cut(s)	742
RsaI	GTAC	5 cut(s)	158, 347, 816, 996, 1743
RsaNI	GTAC	5 cut(s)	157, 346, 815, 995, 1742
RseI	CAYNNNNRTG	1 cut(s)	1137
SapI	GCTCTTC	1 cut(s)	1425
SaqAI	TTAA	5 cut(s)	273, 737, 1155, 1484, 1578
SatI	GCNGC	6 cut(s)	1119, 1217, 1231, 1470, 1563, 1607
Sau96I	GGNCC	3 cut(s)	513, 1389, 1493
ScrFI	CCNGG	5 cut(s)	98, 187, 469, 1102, 1611
SduI	GDGCHC	1 cut(s)	1420
SfaNI	GCATC	8 cut(s)	199, 384, 477, 570, 663, 826, 1412, 1492
SfcI	CTRYAG	1 cut(s)	16
SfuI	TTCGAA	1 cut(s)	854
SinI	GGWCC	3 cut(s)	513, 1389, 1493
SmiMI	CAYNNNNRTG	1 cut(s)	1137
SmlI	CTYRAG	2 cut(s)	910, 1376
SmoI	CTYRAG	2 cut(s)	910, 1376
SphI	GCATGC	1 cut(s)	1230
Sse9I	AATT	6 cut(s)	1152, 1178, 1408, 1549, 1629, 1779
SsiI	CCGC	6 cut(s)	94, 168, 249, 450, 516, 527
SspMI	CTAG	5 cut(s)	561, 585, 1053, 1466, 1539
StyD4I	CCNGG	5 cut(s)	96, 185, 467, 1100, 1609
StyI	CCWWGG	1 cut(s)	240
TaaI	ACNGT	4 cut(s)	20, 145, 427, 979
TaiI	ACGT	4 cut(s)	36, 129, 137, 952
TaqI	TCGA	5 cut(s)	105, 552, 854, 1076, 1342
TasI	AATT	6 cut(s)	1152, 1178, 1408, 1549, 1629, 1779
TatI	WGTACW	2 cut(s)	814, 994
Tru1I	TTAA	5 cut(s)	273, 737, 1155, 1484, 1578
Tru9I	TTAA	5 cut(s)	273, 737, 1155, 1484, 1578
TscAI	CASTG	2 cut(s)	25, 811
TseFI	GTSAC	1 cut(s)	130
TseI	GCWGC	6 cut(s)	1118, 1216, 1230, 1469, 1562, 1606
Tsp45I	GTSAC	1 cut(s)	130
TspDTI	ATGAA	5 cut(s)	570, 846, 1182, 1598, 1782
TspGWI	ACGGA	1 cut(s)	283
TspRI	CASTG	2 cut(s)	25, 811
VpaK11BI	GGWCC	3 cut(s)	513, 1389, 1493
XceI	RCATGY	3 cut(s)	691, 1230, 1649
XcmI	CCANNNNNNNNNTGG	1 cut(s)	31
XspI	CTAG	5 cut(s)	561, 585, 1053, 1466, 1539
ZraI	GACGTC	1 cut(s)	950
Zsp2I	ATGCAT	1 cut(s)	841

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.