FvH4_7g07690

Tubulin-folding cofactor

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
7557559 .. 7567445
9887 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g07690.t1

Sequence Viewer

Length: 3786 bp
ATGGCAGCTTTAGCCCCAAAGGAGGAGATGAAGGCAGTTGGAGTGGTAGAAGAAGAAGAAGAAGACGACGAGTACGGCGCAAAGGAGGCAGTGCTGCAAAAGTACTTCCTTCAAGAATGGAAGCTCGTCAAGTCCCTCCTAGACGACATCGTTTCGCACAGCCTCGTCTCCGATCCCTCCGCTCCCCACAAGATCCGATCCATCATGGACAAGTATCAAGAACAGGGTCAATTGGTGGAGCCTTACCTGGAGAGCATTGTTACCCCACTCATGTTTATCGTCCGCTCTAAAACAGTTGAACTAGGAGTGGCTTCGGATGAGATTCTGCAAGTGATTAAGCCTATATGCATCATTATTTACTCTCTGGTCACCGTTTGTGGGTACAAGGCCGTTGTCAGGTTCTTCCCGCATCAAGTTTCGGACTTGGAACTTGCTGTGTCTGTCCTGGAGAAGTGCCACCACACTACTTCAGTGTCATCATTGCGGCAGGAAAGTACTGGAGAAATGGAGGCCAAATGTGTGATACTTTTGTGGCTCTCTATACTTGTGTTGGTCCCTTTTGATATCTCCACTGTTGATACTAGCATTGCAAATAACAGTAACGTCGGTAAACTTGAGCCAGCTCCGCTGGTATTGAGAATCACAGGAATATCTAAGGATTACCTTTCAAGTGCTGGTCCTATGCGCACTATAGCTGCTTTGCTGCTATCAAAGCTTCTAACACGTCCGGACATGCCAAGGGCCTTTTCCAGCTTCGTTGAATGGACACATGAAGTCCTATCTTCTCTCACAGATGATGTCATGAACCACTTCCGCTTACTTGGAGCTTTAGAATCCCTAGCTGCTATATTCAAGGCTGGTGGGCGGAAACTCTTGCTCGATGTGATTCCGGTTGTCTGGAATGACATTTCATTGTTGATCAAGTCTAGCTATGCAGCTCGGAGTCCATTGCTTCGCAAGTATTTGATGAAATTAACTCAGAGGATAGGGCTTACCTGTCTCCCTCATCGTTCACCTTCCTGGCGCTATGTGGGAAAAACAAACTCGCTGGGGGAGAACATGTCTTTGTCTGGATCAGGGAAAGCTATTGAATGCAATGATGTTATAAATGCCAAGGATTCAAACTCAGAACCAAGTTCGAGCTGCGTGGAAGATGAAGAAATGGATGTCCCAGAAATTGTAGAAGAGATTATTGAGATGTTACTCACTGGATTGAGAGATACGGATACTGTTGTACGTTGGTCTGCTGCGAAAGGTATTGGTCGCACTTCTTCACGTCTTACAGCTGCTCTTTCAGGGGAGGTCCTATCATCTGTTTTGGAGCTGTTCTCGCCAGGCGAGGGTGATGGGTCATGGCATGGAGGTTGCTTAGCATTGGCGGAATTGGCACGTAGAGGATTGCTCTTACCTGTCAGCCTTCCTAAAGTTGTACCTGTTGTTGTGAAGGCACTACATTATGATATTCGAAGAGGTCCACACAGTGTTGGATCTCATGTGCGAGATGCTGCAGCTTATGTTTGTTGGGCTTTTGGCCGTGCATACTATCATACGGATATGAGAAACATATTGGATCAGCTTGCACCGCACCTTCTAACAGTGGCCTGCTATGACCGTGAGGTTAATTGTAGAAGAGCAGCAGCAGCAGCTTTTCAGGAAAATGTTGGGAGACAGGGTAGTTACCCTCACGGAATTGACATAGTGAACACTGCAGACTATTTTTCACTCTCTTCACGAGCAAACTCTTATGTTCATGTTGCTGTCTCTATTGCTCAATATGAGGGATATCTTTATCCCTTTGTGGATGAGCTGCTGTATAACAAAATTTGTCACTGGGAAAAAGGCTTAAGAGAACTTGCTGCCGATGCTCTTTCTTCTCTTGTTAAATATGATCCTGAATATTTTGCGAACTATGCTTTGGAGAAAATAATTCCTTGTACTCTCTCTTCTGATCTGTGCATGCGGCATGGAGCGACACTGGCAACTGGAGAACTGGTTTTAGCACTACATCAATGTGGTTATGCTCTCTCCACTGATAAACAAAAACGTGTTGCTGGTGTTGTACCTGCTATTGAGAAAGCGCGGCTTTATCGCGGAAAAGGTGGAGAAATTATGCGGTCAGCTGTTTCCCGCTTCATAGAATGTATATCTGTATCTTCTGTATCATTACCAGAAAAGATAAAGCTCAGTTTGCTTGATACTGTCAATGAGAACTTGAGACATCCTAATTCTCAGATTCAGGATGCAGCAGTTAAAGCTCTGAGGCACTTTGTGCAAGCATATCTAATTGCTGCAGATGTTCGAGGTACTAGTATAACATCCAAGTACCTGGAACTCTTGACTGATCCTAATGTGGCTGTAAGAAGAGGATCAGCATTGGCAATAGGTGTTTTGCCCTGCAAACTTCTTTCTAATAGGTGGAAGGATGTGCTTCTGAAACTTTGTAATGCTTGTGCAATTGAGGACAACCCTGATGACAGAGACGCGGAAGCACGAGTAAATGCAGTCAAAGGGCTTGTTTCAGTTTGTGAAGCATTAACTCAGGAAAAGGAGCATTCTGGTGTCCAATCGATGGAGGATGACATGTCTTTGTTCCTGCTCATCAAGGATAGAATAATGACGGCTTTATTGAAAGCTCTCGATGACTATTCTGTGGATAACAGAGGTGATGTGGGTTCTTGGGTACGCGAGGCTGCAATGGATGGCCTTGAGAGATGTACATATATCCTGTGCAAGAGAGATTCCATTGGTGGAAGATCAGGTCGAATCGATTCTTCCCTTGAGCTGGAGCCCAACCACTTACATTTGTTGTTTGATGAAAATCTTGCTACTAGTATAGTTGGGGGAATATGTAAGCAAGCTGCAGAGAAGATGGATAAGCTGAGAGAAGCAGCTGCAAAGGTGCTACAGAGGATTTTGTACAATGATGTAGCTTATGTCCAACATATACCACACAGGAAAAAGCTGGAAGAAATTGTTCCTAATGAAGCTGATCTGAAGTGGGCGGTACCAACTGTTTCATATCCTCGTTTTGTGCAATTGCTGCAGTTTGGCTGCTATAGCAAATCTGTGCTATCGGGGTTAGTTATCTCTGTTGGTGGGTTGCAAGATTCTTTGAGAAAGACATCACTTACAGCATTGTTAGAGTATCTTCAAGTGGTAGAAACTGAAGACCAGAATAAAAAGTCCAGAGAGTACATGCTGTCTACTGACATGCTTTGGCTTCTCCAACACTATAGGAAATGTGACAGAGTCATTGTACCTGCACTGAAGACCATCGAGATTCTTTTCAGCAAAAAGATATTCTTGACTATGGAGATTCAAACAGTGGTTTTCTGTGCTGGTGCTTTGGATTCTCTGGAAGTTGAATTAAAAGGATCAAAGGACTTCTCCAAGCTATATGCAGGCATTGCAATACTTGGATACATAGCTTCAGTTTCAGATTCCATAAATAGTCGGGCTTTCTCTCAGCTTCTCCGTTTTCTAGGTCATCGTTACCCTAAGATACGGAAAGCTTCTGCTGAACAAGTTTACCTTGTTCTCTTGCAAAATGGGGGTCTTGTGGCTGAAAACAAGATTGACAAAGCGCTTGAAATTATATCAGAGACCTGTTGGGAAGGTGATACTGAAGCAGCAAAGCTCGAACGCTTCGAGTTGTATGATATGGCTGGTCTCGACACAGATCTGATTCGTAAGACTAGTAACAGAGTACCAACCAGTAACAGAAATGCAACAGTCACTGATGAAAATGCATCTTATTCCTCGTTAGTCGACTCAAGTGGGTTCTAA

Protein Analysis

1262

Amino Acids

139.61

Weight (kDa)

5.95

Isoelectric Point (pI)

41.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARM_TBCD PF23579 69 - 259 6e-53 Tubulin-specific chaperone D-like, ARM repeat
ARM_TBCD_2nd PF25767 317 - 564 7.5e-107 Tubulin-specific chaperone D-like, ARM repeats
TFCD_C PF12612 944 - 1131 8.6e-57 Tubulin folding cofactor D C terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1106
Acc16I TGCGCA 1 cut(s) 686
Acc36I ACCTGC 2 cut(s) 2071, 3268
Acc65I GGTACC 1 cut(s) 3004
AccB1I GGYRCC 1 cut(s) 3004
AccB7I CCANNNNNTGG 1 cut(s) 2569
AccBSI CCGCTC 2 cut(s) 182, 285
AccI GTMKAC 2 cut(s) 3203, 3768
AccII CGCG 4 cut(s) 2080, 2091, 2483, 2685
AccIII TCCGGA 1 cut(s) 727
AcoI YGGCCR 1 cut(s) 1531
AcsI RAATTY 1 cut(s) 1821
AcuI CTGAAG 6 cut(s) 453, 3014, 3186, 3287, 3414, 3645
AdeI CACNNNGTG 2 cut(s) 1481, 2269
AfeI AGCGCT 1 cut(s) 3585
AfiI CCNNNNNNNGG 6 cut(s) 22, 378, 396, 1340, 2569, 2782
AflII CTTAAG 1 cut(s) 1843
AflIII ACRYGT 4 cut(s) 722, 1059, 2044, 2580
AhlI ACTAGT 3 cut(s) 2306, 2828, 3695
AjiI CACGTC 2 cut(s) 725, 1277
AjnI CCWGG 5 cut(s) 246, 444, 1019, 1333, 2325
AjuI GAANNNNNNNTTGG 4 cut(s) 730, 762, 1898, 1930
Alw26I GTCTC 8 cut(s) 172, 1004, 1660, 1765, 2209, 2472, 3596, 3674
AlwNI CAGNNNCTG 1 cut(s) 3737
Aor13HI TCCGGA 1 cut(s) 727
Aor51HI AGCGCT 1 cut(s) 3585
AoxI GGCC 6 cut(s) 387, 510, 741, 1531, 1599, 2701
ApoI RAATTY 1 cut(s) 1821
ArsI GACNNNNNNTTYG 2 cut(s) 3538, 3570
Asp700I GAANNNNTTC 3 cut(s) 809, 2767, 2973
Asp718I GGTACC 1 cut(s) 3004
AspLEI GCGC 5 cut(s) 80, 687, 1026, 2080, 3586
AspS9I GGNCC 5 cut(s) 553, 677, 741, 1303, 1472
AsuHPI GGTGA 5 cut(s) 361, 1005, 1355, 2675, 3629
AsuII TTCGAA 1 cut(s) 1465
AvaII GGWCC 4 cut(s) 553, 677, 1303, 1472
BaeI ACNNNNGTAYC 4 cut(s) 515, 548, 1218, 1251
BanI GGYRCC 1 cut(s) 3004
BanII GRGCYC 1 cut(s) 2790
BarI GAAGNNNNNNTAC 2 cut(s) 1927, 1959
BauI CACGAG 2 cut(s) 1731, 2490
BbsI GAAGAC 3 cut(s) 69, 3174, 3275
BccI CCATC 6 cut(s) 209, 1340, 2563, 2693, 2863, 3281
BceAI ACGGC 4 cut(s) 91, 374, 1518, 2634
BciT130I CCWGG 5 cut(s) 248, 446, 1021, 1335, 2327
BciVI GTATCC 2 cut(s) 1219, 3413
BclI TGATCA 1 cut(s) 918
BcoDI GTCTC 8 cut(s) 172, 1004, 1660, 1765, 2209, 2472, 3596, 3674
BcuI ACTAGT 3 cut(s) 2306, 2828, 3695
BfaI CTAG 9 cut(s) 140, 302, 582, 839, 927, 2307, 2829, 3482, 3696
BfmI CTRYAG 9 cut(s) 690, 1506, 1707, 2289, 2859, 2903, 3041, 3055, 3232
BfoI RGCGCY 2 cut(s) 1027, 3587
BfrI CTTAAG 1 cut(s) 1843
BfuAI ACCTGC 2 cut(s) 2071, 3268
BfuI GTATCC 2 cut(s) 1219, 3413
BglII AGATCT 1 cut(s) 3679
BlpI GCTNAGC 1 cut(s) 1369
BmcAI AGTACT 2 cut(s) 104, 496
Bme1390I CCNGG 5 cut(s) 248, 446, 1021, 1335, 2327
Bme18I GGWCC 4 cut(s) 553, 677, 1303, 1472
BmgBI CACGTC 2 cut(s) 725, 1277
BmgT120I GGNCC 5 cut(s) 553, 677, 741, 1303, 1472
BmiI GGNNCC 4 cut(s) 240, 555, 2787, 3006
BmrFI CCNGG 5 cut(s) 248, 446, 1021, 1335, 2327
BmrI ACTGGG 1 cut(s) 1840
BmsI GCATC 6 cut(s) 357, 418, 1492, 1852, 2230, 3758
BmuI ACTGGG 1 cut(s) 1840
BpiI GAAGAC 3 cut(s) 69, 3174, 3275
BplI GAGNNNNNCTC 4 cut(s) 1313, 1345, 1386, 1418
BpmI CTGGAG 5 cut(s) 269, 467, 519, 2004, 2804
Bpu1102I GCTNAGC 1 cut(s) 1369
Bpu14I TTCGAA 1 cut(s) 1465
BpuEI CTTGAG 5 cut(s) 635, 2233, 2726, 2798, 3757
Bsa29I ATCGAT 2 cut(s) 2567, 2766
BsaAI YACGTR 1 cut(s) 1391
BsaBI GATNNNNATC 1 cut(s) 2817
BsaI GGTCTC 2 cut(s) 3596, 3674
BsaJI CCNNGG 2 cut(s) 737, 1113
BsaWI WCCGGW 2 cut(s) 727, 889
BsaXI ACNNNNNCTCC 6 cut(s) 1046, 1076, 1657, 1687, 1977, 2007
Bsc4I CCNNNNNNNGG 6 cut(s) 22, 378, 396, 1340, 2569, 2782
Bse1I ACTGG 7 cut(s) 502, 1213, 1835, 1980, 1987, 1995, 3714
Bse3DI GCAATG 6 cut(s) 479, 585, 947, 1102, 2700, 3405
Bse8I GATNNNNATC 1 cut(s) 2817
BseAI TCCGGA 1 cut(s) 727
BseBI CCWGG 5 cut(s) 248, 446, 1021, 1335, 2327
BseCI ATCGAT 2 cut(s) 2567, 2766
BseDI CCNNGG 2 cut(s) 737, 1113
BseGI GGATG 9 cut(s) 322, 1171, 1807, 2218, 2245, 2315, 2428, 2581, 2704
BseJI GATNNNNATC 1 cut(s) 2817
BseLI CCNNNNNNNGG 6 cut(s) 22, 378, 396, 1340, 2569, 2782
BseMI GCAATG 6 cut(s) 479, 585, 947, 1102, 2700, 3405
BseMII CTCAG 8 cut(s) 992, 1140, 2197, 2243, 2249, 2552, 2870, 3479
BseNI ACTGG 7 cut(s) 502, 1213, 1835, 1980, 1987, 1995, 3714
BseRI GAGGAG 1 cut(s) 38
BseYI CCCAGC 1 cut(s) 1048
BsgI GTGCAG 1 cut(s) 3246
Bsh1236I CGCG 4 cut(s) 2080, 2091, 2483, 2685
BshFI GGCC 6 cut(s) 389, 512, 743, 1533, 1601, 2703
BshNI GGYRCC 1 cut(s) 3004
BshVI ATCGAT 2 cut(s) 2567, 2766
BsiSI CCGG 2 cut(s) 728, 890
BslFI GGGAC 3 cut(s) 118, 539, 1154
BslI CCNNNNNNNGG 6 cut(s) 22, 378, 396, 1340, 2569, 2782
BsmAI GTCTC 8 cut(s) 172, 1004, 1660, 1765, 2209, 2472, 3596, 3674
BsmBI CGTCTC 2 cut(s) 172, 2472
BsmFI GGGAC 3 cut(s) 118, 539, 1154
BsmI GAATGC 2 cut(s) 1097, 2551
BsnI GGCC 6 cut(s) 389, 512, 743, 1533, 1601, 2703
Bso31I GGTCTC 2 cut(s) 3596, 3674
Bsp119I TTCGAA 1 cut(s) 1465
Bsp1286I GDGCHC 1 cut(s) 2790
Bsp13I TCCGGA 1 cut(s) 727
Bsp1407I TGTACA 2 cut(s) 2714, 2916
Bsp1720I GCTNAGC 1 cut(s) 1369
BspANI GGCC 6 cut(s) 389, 512, 743, 1533, 1601, 2703
BspCNI CTCAG 8 cut(s) 991, 1139, 2196, 2242, 2250, 2551, 2871, 3478
BspDI ATCGAT 2 cut(s) 2567, 2766
BspEI TCCGGA 1 cut(s) 727
BspFNI CGCG 4 cut(s) 2080, 2091, 2483, 2685
BspHI TCATGA 1 cut(s) 801
BspLI GGNNCC 4 cut(s) 240, 555, 2787, 3006
BspMAI CTGCAG 5 cut(s) 1510, 1711, 2293, 2863, 3045
BspMI ACCTGC 2 cut(s) 2071, 3268
BspQI GCTCTTC 1 cut(s) 1624
BspT104I TTCGAA 1 cut(s) 1465
BspT107I GGYRCC 1 cut(s) 3004
BspTI CTTAAG 1 cut(s) 1843
BspTNI GGTCTC 2 cut(s) 3596, 3674
BsrBI CCGCTC 2 cut(s) 182, 285
BsrDI GCAATG 6 cut(s) 479, 585, 947, 1102, 2700, 3405
BsrGI TGTACA 2 cut(s) 2714, 2916
BsrI ACTGG 7 cut(s) 502, 1213, 1835, 1980, 1987, 1995, 3714
BssECI CCNNGG 2 cut(s) 737, 1113
BssSI CACGAG 2 cut(s) 1731, 2490
BssT1I CCWWGG 2 cut(s) 737, 1113
Bst2BI CACGAG 2 cut(s) 1731, 2490
Bst2UI CCWGG 5 cut(s) 248, 446, 1021, 1335, 2327
Bst6I CTCTTC 6 cut(s) 1179, 1462, 1624, 1732, 1948, 2356
BstAFI CTTAAG 1 cut(s) 1843
BstAPI GCANNNNNTGC 3 cut(s) 2269, 3040, 3407
BstAUI TGTACA 2 cut(s) 2714, 2916
BstBAI YACGTR 1 cut(s) 1391
BstBI TTCGAA 1 cut(s) 1465
BstC8I GCNNGC 7 cut(s) 621, 1578, 1603, 1958, 2274, 2856, 3403
BstEII GGTNACC 1 cut(s) 367
BstF5I GGATG 9 cut(s) 322, 1171, 1807, 2218, 2245, 2315, 2428, 2581, 2704
BstFNI CGCG 4 cut(s) 2080, 2091, 2483, 2685
BstH2I RGCGCY 2 cut(s) 1027, 3587
BstHHI GCGC 5 cut(s) 80, 687, 1026, 2080, 3586
BstMAI GTCTC 8 cut(s) 172, 1004, 1660, 1765, 2209, 2472, 3596, 3674
BstNI CCWGG 5 cut(s) 248, 446, 1021, 1335, 2327
BstNSI RCATGY 6 cut(s) 736, 1063, 1960, 2584, 3199, 3214
BstPI GGTNACC 1 cut(s) 367
BstSCI CCNGG 5 cut(s) 246, 444, 1019, 1333, 2325
BstSFI CTRYAG 9 cut(s) 690, 1506, 1707, 2289, 2859, 2903, 3041, 3055, 3232
BstUI CGCG 4 cut(s) 2080, 2091, 2483, 2685
BstV2I GAAGAC 3 cut(s) 69, 3174, 3275
BstX2I RGATCY 3 cut(s) 192, 1487, 3679
BstXI CCANNNNNNTGG 1 cut(s) 2326
BstYI RGATCY 3 cut(s) 192, 1487, 3679
Bsu15I ATCGAT 2 cut(s) 2567, 2766
BsuI GTATCC 2 cut(s) 1219, 3413
BsuRI GGCC 6 cut(s) 389, 512, 743, 1533, 1601, 2703
BsuTUI ATCGAT 2 cut(s) 2567, 2766
BtrI CACGTC 2 cut(s) 725, 1277
BtsCI GGATG 9 cut(s) 322, 1171, 1807, 2218, 2245, 2315, 2428, 2581, 2704
BtsI GCAGTG 2 cut(s) 96, 1704
BveI ACCTGC 2 cut(s) 2071, 3268
Cac8I GCNNGC 7 cut(s) 621, 1578, 1603, 1958, 2274, 2856, 3403
CaiI CAGNNNCTG 1 cut(s) 3737
CciI TCATGA 1 cut(s) 801
CfoI GCGC 5 cut(s) 80, 687, 1026, 2080, 3586
Cfr13I GGNCC 5 cut(s) 553, 677, 741, 1303, 1472
ClaI ATCGAT 2 cut(s) 2567, 2766
CseI GACGC 1 cut(s) 2489
CspCI CAANNNNNGTGG 2 cut(s) 841, 876
DraIII CACNNNGTG 2 cut(s) 1481, 2269
EaeI YGGCCR 1 cut(s) 1531
Eam1104I CTCTTC 6 cut(s) 1179, 1462, 1624, 1732, 1948, 2356
EarI CTCTTC 6 cut(s) 1179, 1462, 1624, 1732, 1948, 2356
EciI GGCGGA 2 cut(s) 880, 1394
Eco130I CCWWGG 2 cut(s) 737, 1113
Eco24I GRGCYC 1 cut(s) 2790
Eco31I GGTCTC 2 cut(s) 3596, 3674
Eco32I GATATC 2 cut(s) 565, 1784
Eco47I GGWCC 4 cut(s) 553, 677, 1303, 1472
Eco47III AGCGCT 1 cut(s) 3585
Eco57I CTGAAG 6 cut(s) 453, 3014, 3186, 3287, 3414, 3645
Eco91I GGTNACC 1 cut(s) 367
EcoO109I RGGNCCY 2 cut(s) 741, 1303
EcoO65I GGTNACC 1 cut(s) 367
EcoRII CCWGG 5 cut(s) 246, 444, 1019, 1333, 2325
EcoRV GATATC 2 cut(s) 565, 1784
EcoT14I CCWWGG 2 cut(s) 737, 1113
EcoT22I ATGCAT 2 cut(s) 350, 3751
EcoT38I GRGCYC 1 cut(s) 2790
ErhI CCWWGG 2 cut(s) 737, 1113
Esp3I CGTCTC 2 cut(s) 172, 2472
FalI AAGNNNNNCTT 6 cut(s) 2067, 2099, 3287, 3319, 3516, 3548
FaqI GGGAC 3 cut(s) 118, 539, 1154
FauI CCCGC 2 cut(s) 414, 2135
FbaI TGATCA 1 cut(s) 918
FblI GTMKAC 2 cut(s) 3203, 3768
FokI GGATG 9 cut(s) 329, 1178, 1814, 2205, 2252, 2302, 2435, 2588, 2711
FriOI GRGCYC 1 cut(s) 2790
FspAI RTGCGCAY 1 cut(s) 686
FspBI CTAG 9 cut(s) 140, 302, 582, 839, 927, 2307, 2829, 3482, 3696
FspI TGCGCA 1 cut(s) 686
GlaI GCGC 5 cut(s) 79, 686, 1025, 2079, 3585
GsaI CCCAGC 1 cut(s) 1052
GsuI CTGGAG 5 cut(s) 269, 467, 519, 2004, 2804
HaeII RGCGCY 2 cut(s) 1027, 3587
HaeIII GGCC 6 cut(s) 389, 512, 743, 1533, 1601, 2703
HapII CCGG 2 cut(s) 728, 890
HgaI GACGC 1 cut(s) 2489
HhaI GCGC 5 cut(s) 80, 687, 1026, 2080, 3586
Hin6I GCGC 5 cut(s) 78, 685, 1024, 2078, 3584
HinP1I GCGC 5 cut(s) 78, 685, 1024, 2078, 3584
HincII GTYRAC 1 cut(s) 3769
HindII GTYRAC 1 cut(s) 3769
HindIII AAGCTT 2 cut(s) 713, 3510
HpaII CCGG 2 cut(s) 728, 890
HphI GGTGA 5 cut(s) 361, 1005, 1355, 2675, 3629
Hpy166II GTNNAC 7 cut(s) 611, 1013, 1475, 1702, 3204, 3529, 3769
Hpy8I GTNNAC 7 cut(s) 611, 1013, 1475, 1702, 3204, 3529, 3769
Hpy99I CGWCG 2 cut(s) 71, 608
HpyAV CCTTC 8 cut(s) 25, 119, 1026, 1427, 1438, 1598, 2413, 3608
HpyCH4IV ACGT 6 cut(s) 603, 724, 1237, 1276, 1390, 2044
HpySE526I ACGT 6 cut(s) 603, 724, 1237, 1276, 1390, 2044
HspAI GCGC 5 cut(s) 78, 685, 1024, 2078, 3584
Kpn2I TCCGGA 1 cut(s) 727
KpnI GGTACC 1 cut(s) 3008
Ksp22I TGATCA 1 cut(s) 918
LguI GCTCTTC 1 cut(s) 1624
LmnI GCTCC 8 cut(s) 187, 238, 628, 824, 1321, 1967, 2548, 2785
LweI GCATC 6 cut(s) 357, 418, 1492, 1852, 2230, 3758
MaeI CTAG 9 cut(s) 140, 302, 582, 839, 927, 2307, 2829, 3482, 3696
MaeII ACGT 6 cut(s) 603, 724, 1237, 1276, 1390, 2044
MbiI CCGCTC 2 cut(s) 182, 285
MfeI CAATTG 3 cut(s) 230, 2454, 3035
MflI RGATCY 3 cut(s) 192, 1487, 3679
MhlI GDGCHC 1 cut(s) 2790
MlyI GAGTC 3 cut(s) 952, 3258, 3764
MmeI TCCRAC 4 cut(s) 19, 1465, 2962, 3250
Mph1103I ATGCAT 2 cut(s) 350, 3751
MroI TCCGGA 1 cut(s) 727
MroXI GAANNNNTTC 3 cut(s) 809, 2767, 2973
MseI TTAA 8 cut(s) 336, 974, 1620, 1844, 1881, 2250, 2534, 3368
MslI CAYNNNNRTG 2 cut(s) 2010, 2556
MspA1I CMGCKG 4 cut(s) 628, 1286, 2120, 2891
MspCI CTTAAG 1 cut(s) 1843
MspI CCGG 2 cut(s) 728, 890
MspR9I CCNGG 5 cut(s) 248, 446, 1021, 1335, 2327
MunI CAATTG 3 cut(s) 230, 2454, 3035
Mva1269I GAATGC 2 cut(s) 1097, 2551
MvaI CCWGG 5 cut(s) 248, 446, 1021, 1335, 2327
MvnI CGCG 4 cut(s) 2080, 2091, 2483, 2685
NlaIV GGNNCC 4 cut(s) 240, 555, 2787, 3006
NmuCI GTSAC 4 cut(s) 367, 1826, 3242, 3733
NsbI TGCGCA 1 cut(s) 686
NsiI ATGCAT 2 cut(s) 350, 3751
NspI RCATGY 6 cut(s) 736, 1063, 1960, 2584, 3199, 3214
NspV TTCGAA 1 cut(s) 1465
PaeI GCATGC 1 cut(s) 1960
PagI TCATGA 1 cut(s) 801
PciI ACATGT 2 cut(s) 1059, 2580
PciSI GCTCTTC 1 cut(s) 1624
PcsI WCGNNNNNNNCGW 1 cut(s) 3645
PctI GAATGC 2 cut(s) 1097, 2551
PdmI GAANNNNTTC 3 cut(s) 809, 2767, 2973
PflFI GACNNNGTC 1 cut(s) 3248
PflMI CCANNNNNTGG 1 cut(s) 2569
PfoI TCCNGGA 1 cut(s) 444
PleI GAGTC 3 cut(s) 951, 3257, 3764
PpsI GAGTC 3 cut(s) 951, 3257, 3764
Ppu21I YACGTR 1 cut(s) 1391
PpuMI RGGWCCY 1 cut(s) 1303
PscI ACATGT 2 cut(s) 1059, 2580
PsiI TTATAA 1 cut(s) 1106
Psp5II RGGWCCY 1 cut(s) 1303
Psp6I CCWGG 5 cut(s) 246, 444, 1019, 1333, 2325
PspEI GGTNACC 1 cut(s) 367
PspFI CCCAGC 1 cut(s) 1048
PspGI CCWGG 5 cut(s) 246, 444, 1019, 1333, 2325
PspN4I GGNNCC 4 cut(s) 240, 555, 2787, 3006
PspPI GGNCC 5 cut(s) 553, 677, 741, 1303, 1472
PspPPI RGGWCCY 1 cut(s) 1303
PstI CTGCAG 5 cut(s) 1510, 1711, 2293, 2863, 3045
PstNI CAGNNNCTG 1 cut(s) 3737
PsuI RGATCY 3 cut(s) 192, 1487, 3679
PsyI GACNNNGTC 1 cut(s) 3248
PvuII CAGCTG 3 cut(s) 1286, 2120, 2891
RseI CAYNNNNRTG 2 cut(s) 2010, 2556
SalI GTCGAC 1 cut(s) 3767
SapI GCTCTTC 1 cut(s) 1624
SaqAI TTAA 8 cut(s) 336, 974, 1620, 1844, 1881, 2250, 2534, 3368
Sau96I GGNCC 5 cut(s) 553, 677, 741, 1303, 1472
ScaI AGTACT 2 cut(s) 104, 496
SchI GAGTC 3 cut(s) 952, 3258, 3764
ScrFI CCNGG 5 cut(s) 248, 446, 1021, 1335, 2327
SduI GDGCHC 1 cut(s) 2790
SfaNI GCATC 6 cut(s) 357, 418, 1492, 1852, 2230, 3758
SfcI CTRYAG 9 cut(s) 690, 1506, 1707, 2289, 2859, 2903, 3041, 3055, 3232
SfuI TTCGAA 1 cut(s) 1465
SinI GGWCC 4 cut(s) 553, 677, 1303, 1472
SmiMI CAYNNNNRTG 2 cut(s) 2010, 2556
SmlI CTYRAG 6 cut(s) 614, 1843, 2212, 2705, 2777, 3772
SmoI CTYRAG 6 cut(s) 614, 1843, 2212, 2705, 2777, 3772
SpeI ACTAGT 3 cut(s) 2306, 2828, 3695
SphI GCATGC 1 cut(s) 1960
SspI AATATT 1 cut(s) 1898
SspMI CTAG 9 cut(s) 140, 302, 582, 839, 927, 2307, 2829, 3482, 3696
StyD4I CCNGG 5 cut(s) 246, 444, 1019, 1333, 2325
StyI CCWWGG 2 cut(s) 737, 1113
TaiI ACGT 6 cut(s) 606, 727, 1240, 1279, 1393, 2047
TatI WGTACW 6 cut(s) 102, 494, 1934, 2714, 2916, 3192
TauI GCSGC 3 cut(s) 487, 1963, 2083
Tru1I TTAA 8 cut(s) 336, 974, 1620, 1844, 1881, 2250, 2534, 3368
Tru9I TTAA 8 cut(s) 336, 974, 1620, 1844, 1881, 2250, 2534, 3368
TseFI GTSAC 4 cut(s) 367, 1826, 3242, 3733
Tsp45I GTSAC 4 cut(s) 367, 1826, 3242, 3733
TspGWI ACGGA 5 cut(s) 1238, 1565, 1701, 3464, 3520
Tth111I GACNNNGTC 1 cut(s) 3248
Van91I CCANNNNNTGG 1 cut(s) 2569
Vha464I CTTAAG 1 cut(s) 1843
VpaK11BI GGWCC 4 cut(s) 553, 677, 1303, 1472
XapI RAATTY 1 cut(s) 1821
XceI RCATGY 6 cut(s) 736, 1063, 1960, 2584, 3199, 3214
XmiI GTMKAC 2 cut(s) 3203, 3768
XmnI GAANNNNTTC 3 cut(s) 809, 2767, 2973
XspI CTAG 9 cut(s) 140, 302, 582, 839, 927, 2307, 2829, 3482, 3696
ZrmI AGTACT 2 cut(s) 104, 496
Zsp2I ATGCAT 2 cut(s) 350, 3751
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.