Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0007907

Physical Location & Seq

Genomic Coordinates Reverse (-)

641467 .. 652083

Gene Structure 10617 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g00760.14

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3960 bp

ATGACTATTGCTACAATTGGGGTCCCTCAACTCATCAAAACGTGTTTAAACAGAAAAGTTAAAAAAGAGAGAGTGAAGTTTACTGGGAGCGGAGGGGGTTCTCAAGCGAACAAAGGCGGGAACTTGCAACCACCTCCGAAAATGGCAACCATGGCGGCGGAAGAAAACCCAAAGCAGAAACAGGAACTTGCAATGGGTGAGGAAGAAGACGACGACGAACATGGCGCCAAGGAGGCAGTACTCCAAAAGTACTTCCTTCAAGAATGGAAGCTCGTCAAGTCCATCTTAGACGACATTGTTTCCAATGGGCGGGTCTCCGATCCCACCGCTCCCCGCAAGATCCGATCCATTATGGACAAGTATCAAGAACAGGGCCAGCTAGTTGAACCGTACCTAGAGAGCATTGTTACCCCGCTCATGTTTATTGTCCGCTCTAAAACAAGCGAATTAGGTGTAGCTTCGGATGAAATTCTTGAAGTAATTAAACCTATATGCATCATTCTTTATTCTCTGGTCACAGTTTGTGGATACAAGGCGGTTGTCAGGTTCTTTCCGCATCAAGTCTCGGACTTGGAACTTGCTGTGTCTCTCTTGGAGAAGTGCCATCACACAAAGTCAGTGTCATCACTGCGTCAGGAAAGTACAGGAGAGATGGAAGCTAAATGTGTGATGCTTTTGTGGCTGTCTATACTCGTGTTGGTTCCGTTTGATATCTCCACTGTTGATACTAGCATTGCAAACAACAGTAATCTTGGAAAACTTGAGCCAGCTCCTCTGGTATTGAGGATAGTAGGGTTCTCCAAAGATTACCTTTCAAATTCAGGCCCTATGCGTCCTATTGCTGCTTTGCTGCTCTCAAAGTTTTTAACACGCCCAGACATGCCAAAGGCTTTTTCCAGCTTTGTTGAATGGACACACGAAGTACTATCTTCTCTGACAGATGATGCCATCAATCATTTCCGGTTACTTGGAGCTACAGAAGCACTGGCTGCTATTTTCAAGGTTGGTGGGCGGAAACTCTTGCTTGATGTGGTTTCTATTGTTTGGGTTGACACCTTATTGTTGATCAAGTCTAGCAACGCATCTAGGAGCCCATTACTGCGCAAGTATCTGATGAAATTAACCCAGAGGATTGGGCTTACTTGCCTTCCTCATCATACACCTTCATGGCGCTATGTGGGGAAAACAAGCTCTTTGGGAGAGAACATAACTTTGTCTGGATCTGAAAAGACTGGTCGATGCAATTATGCTTTAAATGCTGAGGATTCCAACTCAGAACCAAGTTCAAGCTGCCAGCAAGATGAAGAAATGGATGTTCCAGAAGTTGTAGAAGAGATTATTGAGATGCTACTTACTGGTTTGAGAGATACGGACACTGTTGTGCGTTGGTCTGCTGCAAAAGGTATTGGCCGCATTACTTCATGTCTTACATCTGCCCTTTCAGAGGAGGTCCTGTCGTCTGTGTTGGAGCTGTTTTCACCAGGCGAGGGTGATGGGTCATGGCATGGTGGTTGCTTAGCACTGGCTGAATTGGCGCGTAGAGGGTTGCTCTTACCTATCAGCCTTCCGAAAGTTGTACCTGTTGTTGTGAAGGCACTACATTATGATATTCGAAGAGGTCCACATAGTATTGGATCTCATGTACGGGATGCTGCAGCTTATGTTTGTTGGGCTTTTGGCCGTGCATATTATCACACGGATATGAGAAATATACTGGACCAGCTTGCACCACACCTTCTGACAGTGGCCTGCTACGACCGTGAGGTTAATTGTAGAAGAGCAGCTGCTGCAGCTTTTCAAGAGAATGTTGGAAGGCAGGGTAGTTACCCTCATGGAATTGACATAGTGAATACTGCAGACTATTTTTCACTTTCTTCACGAGTAAACTCTTATGTTCATGTTGCTGTCTCTATTGCTCAATATGAGGGTTATCTTTATCCATTTGTGGATGAGCTGCTGTATAACAAAATTTGTCACTGGGATAAAGGTTTGAGAGAACTTGCGGCTGAGGCTCTTTCTGCCCTTGTTAAATATGATCCTGACTATCTTGCAAACTATGCTGTGGAGAAAATAATTCCTTGCACTCTCTCATCTGATTTGTGCATGCGCCATGGAGCAACACTGGCAGCTGGGGAACTTGTTTTGGCACTACGCAAGTGTGGTTATGCTCTTTCTGCAGATAAGCAAAAACGTGTTGCTGGTGTTGTGCCTGCTATTGAGAAAGCACGCCTTTATCGTGGAAAAGGCGGGGAAATAATGCGTGCAGCTGTTTCCCGCTTCATTGAATGTGTATCTATATCATCTGTGTCACTGCCTGAAAAGATAAAACGTAGTCTGCTTGATACTCTTAATGAGAATTTGAGACACCCTAATTCGCAAATTCAGGATGCTGCAACTAAAGCTCTGAAGCATTTTGTGCAAGCATATCTGGTTGCTGGGTCTGTTGGAGGTACTGATGATATAACATCAAAGTACCTGGACCTCTTGAGTGACCCAAATGTGGCTATAAGAAGAGGGTCAGCACTAGCACTAGGTGTTTTACCATGTGAACTTTTCACCCATAGGTGGAAGGATGTGCTTTTGAAGCTTTGTAACTCTTGTTTAATTGAGGATAATCCCGATGATAGAGATGCTGAAGCACGAGTCAATGCTGTCAAAGGACTTGTGTCAGTGTGTGAAGCATTAACTCGGGAAAAAGAACAATCTGGTATTGATGTCGTGGAGGGTGACATGTCTTTGTTTATTCTCATCAAGGACGAAATTATGATGACTTTACTGAAAGCTCTTGATGACTATTCTGTTGATAACAGAGGTGATGTGGGTTCTTGGGTGCGTGAGGCTGCTATGAATGGCCTTGAGAGATGTACGTATATCCTCTGTAAGACAGATTCTGTTGGTCTTACTGGAAGATCAGGTCGAGTCGATTCTGCACTGGAGTTGCAGAATAGTGATGACATTAACCAGCTGCAATCATTGTATGATGCCAATCTTGCTACAAGTATAGTTGCTGGAATTAGTAAGCAAGCTGTAGAGAAAATGGACAAACTGAGAGAAGCAGCTGCAAAGGTTCTACAGAGGCTTTTGTACACCGAGATAGCCTATGTCCCGCATATACCGCACAGAAAAAAGTTGGAAAAAATTGTTCCTAACGGAGCTGATTTAAAGTGGGCGGTGCCAACTTTTTCGTATCCTCGTTTTGTACAACTGCTTCAATTTGGCTGTTATAGCAGATCAGTGCTATCTGGGTTAGTCATTTCTATTGGTGGGTTGCAAGATTCTTTGAGGAAGGCATCACTCACAGCATTGTTAGAGTATCTTCAAGTTGTAGAAAGTGAAGACCAGAACGAAAGGTCCAGAGAGTATATGTTATCTACTGACATGCTTTGGGTTCTCCAACAGTACAGGAGATGTGACAGAGTCATTGTACCTGCATTGAAGACAATTGAGATTCTTTTCAGCAAACAGATATTGTTGAGTATGGAGGCTCGTACACTTGTTTTTTGTGCTGGTGTTTTGGACTCTCTGGAAGTTGAATTAAAAGGGTCAAAGGACTTCTCCAAGCTATATGCAGGCATTGCAATACTTGGATATATTGCTTCAGTTTCGGAATCCATCAACACTCGGGCCTTCTCACATCTTCTCAGTTTTCTTGGCCATCGCTACCCTAAGATACGGAAAGCTTCTGCCGAACAAGTTTACCTTGTCCTCTTGCAAAATGAGGGTCTTGTGGCTGAGACCAAGGTGGAAAAAGCGCTTGAAATTATTTCAGAAACCTGCTGGGAAGGTGACATGGAAGCAGCTAAAATCCGAAGGTTGGAGTTGTATGATATAGCCGGTCTTGACACAGATATACTTCGGAAGGCTAGTAGCCGAGAATCGAATAAGGATAGTAACAGAAAGCCAACAACTACAGATGAGAATGCATCATATTCCTCGTTAGTTGAGTCATCTGGGTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000226 GO:0003006 GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005856 GO:0005874 GO:0005911 GO:0006457 GO:0006996 GO:0007010 GO:0007017 GO:0007021 GO:0007275 GO:0008047 GO:0008092 GO:0008150 GO:0009506 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0015630 GO:0015631 GO:0016043 GO:0022414 GO:0022607 GO:0030054 GO:0030234 GO:0030695 GO:0032501 GO:0032502 GO:0034622 GO:0043085 GO:0043087 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043547 GO:0043933 GO:0044085 GO:0044093 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0048316 GO:0048487 GO:0048608 GO:0048731 GO:0048856 GO:0050790 GO:0051336 GO:0051345 GO:0055044 GO:0060589 GO:0061458 GO:0065003 GO:0065007 GO:0065009 GO:0071840 GO:0098772 GO:0099080 GO:0099081 GO:0099512 GO:0099513

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TFCD_C

Protein Analysis

1320

Amino Acids

145.82

Weight (kDa)

6.22

Isoelectric Point (pI)

42.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007907)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G60740 AT3G60740 AT3G60740
fragaria_vesca	FvH4_7g07690
malus_domestica	MD02G1313300.v1.1 MD07G1008800.v1.1
prunus_persica	Prupe.2G141700_v2.0.a1 Prupe.2G141700_v2.0.a1 Prupe.2G141700_v2.0.a1 Prupe.2G141700_v2.0.a1
pyrus_communis	pycom07g00760
rosa_chinensis	RchiOBHm_Chr1g0342581
rosa_laevigata	RLG00000029165 RLG00000029175
rosa_multiflora	Rmu_sc0000173.1_g000001 Rmu_ssc0000177.1_g000008
rosa_roxburghii	Rroxscaffold_4G00313120
rosa_rugosa	Rorug01G0147200.1 Rorug01G0148800.1
rosa_samantha	Rh1AG165400 Rh1BG131400 Rh1CG154100 Rh1DG166500
rosa_wichuraiana	Rw1G013760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1103
Acc36I	ACCTGC	2 cut(s)	3436, 3782
AccB1I	GGYRCC	2 cut(s)	224, 3172
AccBSI	CCGCTC	4 cut(s)	90, 329, 415, 432
AccII	CGCG	1 cut(s)	1537
AclWI	GGATC	6 cut(s)	314, 334, 339, 1228, 1642, 2030
AcoI	YGGCCR	3 cut(s)	1408, 1678, 3652
AcsI	RAATTY	5 cut(s)	468, 817, 1968, 2356, 2379
AcuI	CTGAAG	3 cut(s)	2426, 2655, 3582
AcyI	GRCGYC	1 cut(s)	225
AdeI	CACNNNGTG	1 cut(s)	2534
AfeI	AGCGCT	1 cut(s)	3753
AfiI	CCNNNNNNNGG	6 cut(s)	309, 1444, 1487, 2500, 2565, 3814
AflIII	ACRYGT	3 cut(s)	41, 2191, 2730
AjnI	CCWGG	2 cut(s)	1480, 2475
AjuI	GAANNNNNNNTTGG	2 cut(s)	877, 909
AleI	CACNNNNGTG	1 cut(s)	1379
AloI	GAACNNNNNNTCC	2 cut(s)	3335, 3367
Alw26I	GTCTC	6 cut(s)	319, 568, 591, 1912, 2356, 3728
AlwI	GGATC	6 cut(s)	314, 334, 339, 1228, 1642, 2030
AlwNI	CAGNNNCTG	2 cut(s)	1787, 2891
Ama87I	CYCGRG	2 cut(s)	2688, 3621
Aor51HI	AGCGCT	1 cut(s)	3753
AoxI	GGCC	8 cut(s)	373, 823, 1408, 1678, 1746, 2851, 3624, 3652
ApoI	RAATTY	5 cut(s)	468, 817, 1968, 2356, 2379
ArsI	GACNNNNNNTTYG	4 cut(s)	605, 637, 3706, 3738
AspLEI	GCGC	6 cut(s)	227, 1104, 1173, 1537, 2109, 3754
AspS9I	GGNCC	9 cut(s)	22, 373, 824, 1450, 1619, 1717, 2479, 3351, 3624
AsuHPI	GGTGA	7 cut(s)	209, 1470, 1502, 2548, 2738, 2825, 3797
AsuII	TTCGAA	1 cut(s)	1612
AvaI	CYCGRG	2 cut(s)	2688, 3621
AvaII	GGWCC	6 cut(s)	22, 1450, 1619, 1717, 2479, 3351
BalI	TGGCCA	1 cut(s)	3654
BanI	GGYRCC	2 cut(s)	224, 3172
BanII	GRGCYC	1 cut(s)	1094
BarI	GAAGNNNNNNTAC	2 cut(s)	3192, 3224
BauI	CACGAG	3 cut(s)	692, 1878, 2640
BbsI	GAAGAC	3 cut(s)	213, 3342, 3443
BbvCI	CCTCAGC	2 cut(s)	1260, 2007
BccI	CCATC	7 cut(s)	290, 612, 646, 956, 1487, 3620, 3663
BceAI	ACGGC	1 cut(s)	1665
BciT130I	CCWGG	2 cut(s)	1482, 2477
BciVI	GTATCC	2 cut(s)	521, 3198
BclI	TGATCA	1 cut(s)	1065
BcoDI	GTCTC	6 cut(s)	319, 568, 591, 1912, 2356, 3728
BfaI	CTAG	8 cut(s)	380, 395, 729, 1074, 1086, 2525, 2531, 3864
BfmI	CTRYAG	8 cut(s)	975, 1653, 1788, 1854, 2175, 3027, 3071, 3909
BfoI	RGCGCY	3 cut(s)	228, 1174, 3755
BfuAI	ACCTGC	2 cut(s)	3436, 3782
BfuI	GTATCC	2 cut(s)	521, 3198
BglI	GCCNNNNNGGC	1 cut(s)	233
BlpI	GCTNAGC	1 cut(s)	1516
BmcAI	AGTACT	3 cut(s)	240, 251, 924
Bme1390I	CCNGG	2 cut(s)	1482, 2477
Bme18I	GGWCC	6 cut(s)	22, 1450, 1619, 1717, 2479, 3351
BmeT110I	CYCGRG	2 cut(s)	2688, 3621
BmgT120I	GGNCC	9 cut(s)	22, 373, 824, 1450, 1619, 1717, 2479, 3351, 3624
BmiI	GGNNCC	6 cut(s)	23, 24, 226, 702, 1091, 3174
BmrFI	CCNGG	2 cut(s)	1482, 2477
BmrI	ACTGGG	2 cut(s)	93, 1987
BmuI	ACTGGG	2 cut(s)	93, 1987
BoxI	GACNNNNGTC	1 cut(s)	2665
BpiI	GAAGAC	3 cut(s)	213, 3342, 3443
BplI	GAGNNNNNCTC	2 cut(s)	1533, 1565
BpmI	CTGGAG	1 cut(s)	2954
Bpu10I	CCTNAGC	2 cut(s)	1260, 2007
Bpu1102I	GCTNAGC	1 cut(s)	1516
Bpu14I	TTCGAA	1 cut(s)	1612
BpuEI	CTTGAG	4 cut(s)	87, 782, 2506, 2876
BsaAI	YACGTR	1 cut(s)	2868
BsaBI	GATNNNNATC	1 cut(s)	2985
BsaHI	GRCGYC	1 cut(s)	225
BsaI	GGTCTC	2 cut(s)	319, 3728
BsaJI	CCNNGG	4 cut(s)	150, 228, 2110, 3738
BsaWI	WCCGGW	1 cut(s)	960
BsaXI	ACNNNNNCTCC	2 cut(s)	1439, 1469
Bsc4I	CCNNNNNNNGG	6 cut(s)	309, 1444, 1487, 2500, 2565, 3814
Bse118I	RCCGGY	1 cut(s)	3833
Bse3DI	GCAATG	3 cut(s)	198, 732, 3573
Bse8I	GATNNNNATC	1 cut(s)	2985
BseBI	CCWGG	2 cut(s)	1482, 2477
BseDI	CCNNGG	4 cut(s)	150, 228, 2110, 3738
BseGI	GGATG	6 cut(s)	469, 1318, 1654, 1954, 2392, 2578
BseJI	GATNNNNATC	1 cut(s)	2985
BseLI	CCNNNNNNNGG	6 cut(s)	309, 1444, 1487, 2500, 2565, 3814
BseMI	GCAATG	3 cut(s)	198, 732, 3573
BseMII	CTCAG	6 cut(s)	1251, 1287, 1998, 3038, 3655, 3723
BseRI	GAGGAG	2 cut(s)	762, 1460
BseYI	CCCAGC	3 cut(s)	2129, 2435, 3777
BsgI	GTGCAG	2 cut(s)	2283, 2913
Bsh1236I	CGCG	1 cut(s)	1537
Bsh1285I	CGRYCG	1 cut(s)	1759
BshFI	GGCC	8 cut(s)	375, 825, 1410, 1680, 1748, 2853, 3626, 3654
BshNI	GGYRCC	2 cut(s)	224, 3172
BsiEI	CGRYCG	1 cut(s)	1759
BsiHKCI	CYCGRG	2 cut(s)	2688, 3621
BsiSI	CCGG	2 cut(s)	961, 3834
BslFI	GGGAC	2 cut(s)	8, 3089
BslI	CCNNNNNNNGG	6 cut(s)	309, 1444, 1487, 2500, 2565, 3814
BsmAI	GTCTC	6 cut(s)	319, 568, 591, 1912, 2356, 3728
BsmFI	GGGAC	2 cut(s)	8, 3089
BsmI	GAATGC	1 cut(s)	3925
BsnI	GGCC	8 cut(s)	375, 825, 1410, 1680, 1748, 2853, 3626, 3654
Bso31I	GGTCTC	2 cut(s)	319, 3728
BsoBI	CYCGRG	2 cut(s)	2688, 3621
Bsp119I	TTCGAA	1 cut(s)	1612
Bsp1286I	GDGCHC	1 cut(s)	1094
Bsp1407I	TGTACA	2 cut(s)	3084, 3199
Bsp143I	GATC	9 cut(s)	319, 339, 344, 1065, 1220, 1634, 2035, 2909, 3230
Bsp1720I	GCTNAGC	1 cut(s)	1516
Bsp19I	CCATGG	2 cut(s)	150, 2110
BspANI	GGCC	8 cut(s)	375, 825, 1410, 1680, 1748, 2853, 3626, 3654
BspCNI	CTCAG	6 cut(s)	1252, 1286, 1999, 3039, 3654, 3724
BspFNI	CGCG	1 cut(s)	1537
BspLI	GGNNCC	6 cut(s)	23, 24, 226, 702, 1091, 3174
BspMAI	CTGCAG	4 cut(s)	1657, 1792, 1858, 2179
BspMI	ACCTGC	2 cut(s)	3436, 3782
BspPI	GGATC	6 cut(s)	314, 334, 339, 1228, 1642, 2030
BspQI	GCTCTTC	1 cut(s)	1771
BspT104I	TTCGAA	1 cut(s)	1612
BspT107I	GGYRCC	2 cut(s)	224, 3172
BspTNI	GGTCTC	2 cut(s)	319, 3728
BsrBI	CCGCTC	4 cut(s)	90, 329, 415, 432
BsrDI	GCAATG	3 cut(s)	198, 732, 3573
BsrFI	RCCGGY	1 cut(s)	3833
BsrGI	TGTACA	2 cut(s)	3084, 3199
BssAI	RCCGGY	1 cut(s)	3833
BssECI	CCNNGG	4 cut(s)	150, 228, 2110, 3738
BssMI	GATC	9 cut(s)	319, 339, 344, 1065, 1220, 1634, 2035, 2909, 3230
BssNI	GRCGYC	1 cut(s)	225
BssSI	CACGAG	3 cut(s)	692, 1878, 2640
BssT1I	CCWWGG	4 cut(s)	150, 228, 2110, 3738
Bst2BI	CACGAG	3 cut(s)	692, 1878, 2640
Bst2UI	CCWGG	2 cut(s)	1482, 2477
Bst4CI	ACNGT	8 cut(s)	390, 520, 721, 746, 1378, 1744, 1760, 3399
Bst6I	CTCTTC	4 cut(s)	1326, 1609, 1771, 2506
BstACI	GRCGYC	1 cut(s)	225
BstAPI	GCANNNNNTGC	5 cut(s)	989, 1787, 2057, 2416, 3575
BstAUI	TGTACA	2 cut(s)	3084, 3199
BstBAI	YACGTR	1 cut(s)	2868
BstBI	TTCGAA	1 cut(s)	1612
BstDEI	CTNAG	9 cut(s)	286, 1260, 1273, 1516, 2007, 3047, 3641, 3666, 3732
BstDSI	CCRYGG	2 cut(s)	150, 2110
BstENI	CCTNNNNNAGG	1 cut(s)	1442
BstF5I	GGATG	6 cut(s)	469, 1318, 1654, 1954, 2392, 2578
BstFNI	CGCG	1 cut(s)	1537
BstH2I	RGCGCY	3 cut(s)	228, 1174, 3755
BstHHI	GCGC	6 cut(s)	227, 1104, 1173, 1537, 2109, 3754
BstKTI	GATC	9 cut(s)	322, 342, 347, 1068, 1223, 1637, 2038, 2912, 3233
BstMAI	GTCTC	6 cut(s)	319, 568, 591, 1912, 2356, 3728
BstMBI	GATC	9 cut(s)	319, 339, 344, 1065, 1220, 1634, 2035, 2909, 3230
BstMCI	CGRYCG	1 cut(s)	1759
BstNI	CCWGG	2 cut(s)	1482, 2477
BstNSI	RCATGY	4 cut(s)	883, 2107, 2734, 3382
BstPAI	GACNNNNGTC	1 cut(s)	2665
BstSCI	CCNGG	2 cut(s)	1480, 2475
BstSFI	CTRYAG	8 cut(s)	975, 1653, 1788, 1854, 2175, 3027, 3071, 3909
BstSNI	TACGTA	1 cut(s)	2868
BstUI	CGCG	1 cut(s)	1537
BstV2I	GAAGAC	3 cut(s)	213, 3342, 3443
BstX2I	RGATCY	3 cut(s)	339, 1220, 1634
BstXI	CCANNNNNNTGG	1 cut(s)	1133
BstYI	RGATCY	3 cut(s)	339, 1220, 1634
BsuI	GTATCC	2 cut(s)	521, 3198
BsuRI	GGCC	8 cut(s)	375, 825, 1410, 1680, 1748, 2853, 3626, 3654
BtgI	CCRYGG	2 cut(s)	150, 2110
BtgZI	GCGATG	1 cut(s)	3641
BtsCI	GGATG	6 cut(s)	469, 1318, 1654, 1954, 2392, 2578
BtsI	GCAGTG	2 cut(s)	626, 2309
BveI	ACCTGC	2 cut(s)	3436, 3782
CaiI	CAGNNNCTG	2 cut(s)	1787, 2891
CfoI	GCGC	6 cut(s)	227, 1104, 1173, 1537, 2109, 3754
Cfr10I	RCCGGY	1 cut(s)	3833
Cfr13I	GGNCC	9 cut(s)	22, 373, 824, 1450, 1619, 1717, 2479, 3351, 3624
CseI	GACGC	2 cut(s)	620, 821
CspCI	CAANNNNNGTGG	2 cut(s)	988, 1023
DdeI	CTNAG	9 cut(s)	286, 1260, 1273, 1516, 2007, 3047, 3641, 3666, 3732
DinI	GGCGCC	1 cut(s)	226
DpnI	GATC	9 cut(s)	321, 341, 346, 1067, 1222, 1636, 2037, 2911, 3232
DpnII	GATC	9 cut(s)	319, 339, 344, 1065, 1220, 1634, 2035, 2909, 3230
DraI	TTTAAA	3 cut(s)	48, 1254, 3162
DraIII	CACNNNGTG	1 cut(s)	2534
EaeI	YGGCCR	3 cut(s)	1408, 1678, 3652
Eam1104I	CTCTTC	4 cut(s)	1326, 1609, 1771, 2506
EarI	CTCTTC	4 cut(s)	1326, 1609, 1771, 2506
EciI	GGCGGA	2 cut(s)	173, 1027
Eco105I	TACGTA	1 cut(s)	2868
Eco130I	CCWWGG	4 cut(s)	150, 228, 2110, 3738
Eco24I	GRGCYC	1 cut(s)	1094
Eco31I	GGTCTC	2 cut(s)	319, 3728
Eco32I	GATATC	1 cut(s)	712
Eco47I	GGWCC	6 cut(s)	22, 1450, 1619, 1717, 2479, 3351
Eco47III	AGCGCT	1 cut(s)	3753
Eco57I	CTGAAG	3 cut(s)	2426, 2655, 3582
Eco88I	CYCGRG	2 cut(s)	2688, 3621
EcoNI	CCTNNNNNAGG	1 cut(s)	1442
EcoO109I	RGGNCCY	3 cut(s)	22, 824, 1450
EcoRII	CCWGG	2 cut(s)	1480, 2475
EcoRV	GATATC	1 cut(s)	712
EcoT14I	CCWWGG	4 cut(s)	150, 228, 2110, 3738
EcoT22I	ATGCAT	2 cut(s)	497, 3925
EcoT38I	GRGCYC	1 cut(s)	1094
EgeI	GGCGCC	1 cut(s)	226
EheI	GGCGCC	1 cut(s)	226
ErhI	CCWWGG	4 cut(s)	150, 228, 2110, 3738
FalI	AAGNNNNNCTT	8 cut(s)	269, 301, 795, 827, 2214, 2246, 3684, 3716
FaqI	GGGAC	2 cut(s)	8, 3089
FauI	CCCGC	7 cut(s)	110, 303, 341, 420, 2240, 2282, 3114
FbaI	TGATCA	1 cut(s)	1065
FokI	GGATG	6 cut(s)	476, 1325, 1661, 1961, 2399, 2585
FriOI	GRGCYC	1 cut(s)	1094
FspBI	CTAG	8 cut(s)	380, 395, 729, 1074, 1086, 2525, 2531, 3864
FspI	TGCGCA	1 cut(s)	1103
GlaI	GCGC	6 cut(s)	226, 1103, 1172, 1536, 2108, 3753
GsaI	CCCAGC	3 cut(s)	2133, 2439, 3781
GsuI	CTGGAG	1 cut(s)	2954
HaeII	RGCGCY	3 cut(s)	228, 1174, 3755
HaeIII	GGCC	8 cut(s)	375, 825, 1410, 1680, 1748, 2853, 3626, 3654
HapII	CCGG	2 cut(s)	961, 3834
HgaI	GACGC	2 cut(s)	620, 821
HhaI	GCGC	6 cut(s)	227, 1104, 1173, 1537, 2109, 3754
Hin1I	GRCGYC	1 cut(s)	225
Hin6I	GCGC	6 cut(s)	225, 1102, 1171, 1535, 2107, 3752
HinP1I	GCGC	6 cut(s)	225, 1102, 1171, 1535, 2107, 3752
HincII	GTYRAC	1 cut(s)	1051
HindII	GTYRAC	1 cut(s)	1051
HindIII	AAGCTT	2 cut(s)	2585, 3678
HpaII	CCGG	2 cut(s)	961, 3834
HphI	GGTGA	7 cut(s)	209, 1470, 1502, 2548, 2738, 2825, 3797
Hpy166II	GTNNAC	8 cut(s)	81, 1051, 1622, 1885, 2549, 3087, 3491, 3697
Hpy8I	GTNNAC	8 cut(s)	81, 1051, 1622, 1885, 2549, 3087, 3491, 3697
Hpy99I	CGWCG	2 cut(s)	215, 218
HpyCH4III	ACNGT	8 cut(s)	390, 520, 721, 746, 1378, 1744, 1760, 3399
HpyCH4IV	ACGT	4 cut(s)	41, 2191, 2329, 2867
HpyF3I	CTNAG	9 cut(s)	286, 1260, 1273, 1516, 2007, 3047, 3641, 3666, 3732
HpySE526I	ACGT	4 cut(s)	41, 2191, 2329, 2867
Hsp92I	GRCGYC	1 cut(s)	225
HspAI	GCGC	6 cut(s)	225, 1102, 1171, 1535, 2107, 3752
KasI	GGCGCC	1 cut(s)	224
KflI	GGGWCCC	1 cut(s)	22
Ksp22I	TGATCA	1 cut(s)	1065
Kzo9I	GATC	9 cut(s)	319, 339, 344, 1065, 1220, 1634, 2035, 2909, 3230
LguI	GCTCTTC	1 cut(s)	1771
LmnI	GCTCC	8 cut(s)	87, 334, 775, 971, 1089, 1468, 2114, 3152
MaeI	CTAG	8 cut(s)	380, 395, 729, 1074, 1086, 2525, 2531, 3864
MaeII	ACGT	4 cut(s)	41, 2191, 2329, 2867
MalI	GATC	9 cut(s)	321, 341, 346, 1067, 1222, 1636, 2037, 2911, 3232
MbiI	CCGCTC	4 cut(s)	90, 329, 415, 432
MboI	GATC	9 cut(s)	319, 339, 344, 1065, 1220, 1634, 2035, 2909, 3230
MfeI	CAATTG	2 cut(s)	15, 3441
MflI	RGATCY	3 cut(s)	339, 1220, 1634
MhlI	GDGCHC	1 cut(s)	1094
MlsI	TGGCCA	1 cut(s)	3654
MluNI	TGGCCA	1 cut(s)	3654
Mly113I	GGCGCC	1 cut(s)	225
MlyI	GAGTC	5 cut(s)	2652, 2928, 3426, 3512, 3953
MmeI	TCCRAC	7 cut(s)	1293, 1446, 1789, 2425, 3111, 3418, 3795
Mox20I	TGGCCA	1 cut(s)	3654
Mph1103I	ATGCAT	2 cut(s)	497, 3925
MscI	TGGCCA	1 cut(s)	3654
MslI	CAYNNNNRTG	3 cut(s)	1165, 1379, 1700
Msp20I	TGGCCA	1 cut(s)	3654
MspA1I	CMGCKG	5 cut(s)	1784, 2129, 2267, 2965, 3059
MspI	CCGG	2 cut(s)	961, 3834
MspR9I	CCNGG	2 cut(s)	1482, 2477
MssI	GTTTAAAC	1 cut(s)	48
MunI	CAATTG	2 cut(s)	15, 3441
Mva1269I	GAATGC	1 cut(s)	3925
MvaI	CCWGG	2 cut(s)	1482, 2477
MvnI	CGCG	1 cut(s)	1537
NarI	GGCGCC	1 cut(s)	225
NcoI	CCATGG	2 cut(s)	150, 2110
NdeII	GATC	9 cut(s)	319, 339, 344, 1065, 1220, 1634, 2035, 2909, 3230
NlaIV	GGNNCC	6 cut(s)	23, 24, 226, 702, 1091, 3174
NmeAIII	GCCGAG	1 cut(s)	3896
NmuCI	GTSAC	7 cut(s)	514, 1973, 2307, 2489, 2726, 3410, 3785
NsbI	TGCGCA	1 cut(s)	1103
NsiI	ATGCAT	2 cut(s)	497, 3925
NspI	RCATGY	4 cut(s)	883, 2107, 2734, 3382
NspV	TTCGAA	1 cut(s)	1612
OliI	CACNNNNGTG	1 cut(s)	1379
PaeI	GCATGC	1 cut(s)	2107
PciI	ACATGT	1 cut(s)	2730
PciSI	GCTCTTC	1 cut(s)	1771
PcsI	WCGNNNNNNNCGW	1 cut(s)	2233
PctI	GAATGC	1 cut(s)	3925
PfeI	GAWTC	7 cut(s)	1265, 2888, 2924, 3275, 3448, 3608, 3875
PflFI	GACNNNGTC	1 cut(s)	3416
PleI	GAGTC	5 cut(s)	2651, 2927, 3425, 3512, 3952
PluTI	GGCGCC	1 cut(s)	228
PmeI	GTTTAAAC	1 cut(s)	48
PpsI	GAGTC	5 cut(s)	2651, 2927, 3425, 3512, 3952
Ppu21I	YACGTR	1 cut(s)	2868
PpuMI	RGGWCCY	2 cut(s)	22, 1450
PscI	ACATGT	1 cut(s)	2730
PshAI	GACNNNNGTC	1 cut(s)	2665
Psp5II	RGGWCCY	2 cut(s)	22, 1450
Psp6I	CCWGG	2 cut(s)	1480, 2475
PspFI	CCCAGC	3 cut(s)	2129, 2435, 3777
PspGI	CCWGG	2 cut(s)	1480, 2475
PspN4I	GGNNCC	6 cut(s)	23, 24, 226, 702, 1091, 3174
PspPI	GGNCC	9 cut(s)	22, 373, 824, 1450, 1619, 1717, 2479, 3351, 3624
PspPPI	RGGWCCY	2 cut(s)	22, 1450
PstI	CTGCAG	4 cut(s)	1657, 1792, 1858, 2179
PstNI	CAGNNNCTG	2 cut(s)	1787, 2891
PsuI	RGATCY	3 cut(s)	339, 1220, 1634
PsyI	GACNNNGTC	1 cut(s)	3416
PvuII	CAGCTG	5 cut(s)	1784, 2129, 2267, 2965, 3059
RseI	CAYNNNNRTG	3 cut(s)	1165, 1379, 1700
SapI	GCTCTTC	1 cut(s)	1771
Sau3AI	GATC	9 cut(s)	319, 339, 344, 1065, 1220, 1634, 2035, 2909, 3230
Sau96I	GGNCC	9 cut(s)	22, 373, 824, 1450, 1619, 1717, 2479, 3351, 3624
ScaI	AGTACT	3 cut(s)	240, 251, 924
SchI	GAGTC	5 cut(s)	2652, 2928, 3426, 3512, 3953
ScrFI	CCNGG	2 cut(s)	1482, 2477
SduI	GDGCHC	1 cut(s)	1094
SfcI	CTRYAG	8 cut(s)	975, 1653, 1788, 1854, 2175, 3027, 3071, 3909
SfoI	GGCGCC	1 cut(s)	226
SfuI	TTCGAA	1 cut(s)	1612
SinI	GGWCC	6 cut(s)	22, 1450, 1619, 1717, 2479, 3351
SmiMI	CAYNNNNRTG	3 cut(s)	1165, 1379, 1700
SmlI	CTYRAG	4 cut(s)	102, 761, 2485, 2855
SmoI	CTYRAG	4 cut(s)	102, 761, 2485, 2855
SnaBI	TACGTA	1 cut(s)	2868
SphI	GCATGC	1 cut(s)	2107
SspDI	GGCGCC	1 cut(s)	224
SspMI	CTAG	8 cut(s)	380, 395, 729, 1074, 1086, 2525, 2531, 3864
StyD4I	CCNGG	2 cut(s)	1480, 2475
StyI	CCWWGG	4 cut(s)	150, 228, 2110, 3738
TaaI	ACNGT	8 cut(s)	390, 520, 721, 746, 1378, 1744, 1760, 3399
TaiI	ACGT	4 cut(s)	44, 2194, 2332, 2870
TaqI	TCGA	5 cut(s)	1237, 1612, 2917, 2922, 3878
TatI	WGTACW	7 cut(s)	238, 249, 641, 922, 3084, 3199, 3399
TauI	GCSGC	3 cut(s)	158, 1413, 2006
TfiI	GAWTC	7 cut(s)	1265, 2888, 2924, 3275, 3448, 3608, 3875
TseFI	GTSAC	7 cut(s)	514, 1973, 2307, 2489, 2726, 3410, 3785
Tsp45I	GTSAC	7 cut(s)	514, 1973, 2307, 2489, 2726, 3410, 3785
TspDTI	ATGAA	8 cut(s)	480, 1130, 1155, 1317, 1410, 1886, 2269, 2861
TspGWI	ACGGA	5 cut(s)	693, 1385, 1712, 3165, 3688
Tth111I	GACNNNGTC	1 cut(s)	3416
VpaK11BI	GGWCC	6 cut(s)	22, 1450, 1619, 1717, 2479, 3351
XagI	CCTNNNNNAGG	1 cut(s)	1442
XapI	RAATTY	5 cut(s)	468, 817, 1968, 2356, 2379
XceI	RCATGY	4 cut(s)	883, 2107, 2734, 3382
XspI	CTAG	8 cut(s)	380, 395, 729, 1074, 1086, 2525, 2531, 3864
ZrmI	AGTACT	3 cut(s)	240, 251, 924
Zsp2I	ATGCAT	2 cut(s)	497, 3925

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.