Prupe.2G141700_v2.0.a1

Tubulin-folding cofactor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
19776428 .. 19786350
9923 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G141700.1

Sequence Viewer

Length: 3828 bp
ATGGCAGCCATGGCAGAAGAAAACCCAAAGCACAAACATGAGATGGAGTTGGCACTATCAGTGCCAATGGGTGAGGAAGATGACGACGAGCATGGCGCCAAGGAGGCAGTGCTCCAAAAGTACTTCCTTCAAGAATGGAAGCTCGTCAAGTCCATCTTGAACGACATCGTATCCAATGGACGCGTCTCCGATCCCTCCGCTCCCCACAAGATCCGATCCATTATGGACAAGTATCAAGAACAGGGTCAATTAGTAGAACCTTACCTGGAGAGCATTGTTTCCCCGCTGATGTTTATTGTGCGCTCCAAAACAGTTGAATTGGGTGCAGCGTCAGATGAAATTCTTAAAGTAATTAAACCTATATGTATCATTATCTATTCTCTGGTCACAGTTTGCGGATACAAGGCTGTTGTCAGGTTCTTCCCTCATCAAGTATCCGACTTGGAACTTGCTGTGTCTCTCTTAGAGAAGTGCCATCACACAAGTTCAGTGTCGTCACTGCGACAGGAAAGTACAGGAGAGATGGAGGCTAAATGTGTGATGCTTTTGTGGCTTTCTATACTTGTGTTGGTTCCGTTCGATATCTCCACTGTTGATACTAGCATTGCAAACAACAGTAACCTTGGAAAACTTGAGCCAGCTCCTCTGGTATTGAGGATAATAGGGTTCTCCAAAGATTACCTTTCAAATGCAGGCCCTATGCGTACGATAGCTGCTTTGCTGCTATCAAAGCTTCTAACGCGTCCAGACATGCCAAAGGCCTTTTCCAGCTTTGTTGAGTGGGCACATGAAGTCCTATCTTCTCTGATGGATGATGTCATCAATCACTTCCGGTTACTTGGAGCTACAGAAGCACTGGCTGCTGTTTTCAAGGTTGGTGGGCGGAAACTCTTGCTTGATGTGGTTCCTACTATTTGGAATGACACCTCTTTGTTGATCAATTCTAGCAATGCATCTCGAAGTCCATTGCTTCGCAAGTATCTGATGAAATTAACTCAAAGGATTGGGCTTACTTGCCTCCCTCATCATACACCTTCATGGCGCTATGTGGGAAAGAAAAGAACATTGGGAGAGAACATTACTTTGTCTGCATCTGAAAATACTGGTCAATGCAATTATGCTTTGAATACTGAGGATTCAAACTCAGAACCAAGTTCCAGCTGCCTGCAAGATGAAGAAATGGATGTTCCAGAAGTCGTAGAAGAGATTATTGAGATGTTACTCACTGGGTTGAGAGATACGGACACTGTTGTGCGTTGGTCTGCTGCAAAAGGTATTGGCCGCATTACTTCATGTCTTTCATCTGCTCTTTCAGAGGAGGTCCTGTCATCTGTCTTGGAGCTATTTTCACCAGGCGAGGGTGATGGGTCATGGCATGGTGGTTGCTTAGCATTGGCCGAATTGGCACGGAGAGGGTTGCTTTTACCTATCAGCCTTCCTAAAGTTGTACCTGTTGTCGTGAAGGCACTACATTATGATATTCGAAGAGGTCCGCATAGTGTTGGATCTCATGTACGGGATGCTGCAGCTTATGTTTGTTGGGCTTTTGGTCGTGCATATTATCACAAGGATATGAGAAATATATTGGACCAGCTTGCAGCACACCTTCTAACAGTGGCCTGCTACGATCGTGAGGTGAACTGTAGAAGAGCAGCTGCAGCCGCTTTTCAGGAGAATGTTGGAAGACAGGGTAGTTACCCACATGGAATTGACATAGTGAATACTGCTGACTATTTTTCACTTTCTTCACGAGTAAACTCTTACGTTCATGTTGCTGTCTCTATTGCACAATATGAGGGTTATCTTTATCCATTCGTGGATGAGCTGCTGTATAGCAAAATTTGTCATTGGGATAAAGGCTTGAGAGAACTTGCTGCTGAGGCCCTTTCTGCACTTGTTAAATACGATCCTGACTATTTTGCAAACTATGCTTTGGAGAAAATAATTCCTTGTACTCTCTCATCTGATTTGTGCATGCGCCATGGAGCGACACTAGCAGCTGGGGAACTTGTTTTGGCACTACATCGATGTGATTATGCTCTTTCCGCTGATATGCAAAAGCGTGTTGCTGGTGTTGTACTTGCTATTGAGAAAGCACGCCTTTATCGTGGAAAAGGTGGAGAAATTATGCGTTCAGCTGTTTCCCGGTTCATCGAATGTGTATCTATATCTTCTGTGTCACTGCCAGAAAAGATAAAGCGCAGTTTTCTTGATACACTTAATGAGAATTTGAGGCATCCTAATTCTCAGATTCAGGATGCTGCTGTTAATGCTCTGAAGCACTTCGTCCAAGCATATCTGGTTGCTGCGTCTGTTGGTATTACTGGTGATATAACATCAAAGTACCTGGAACTCTTGACTGACCCAAATGTAGCTGTAAGAAGAGGATCAGCATTAGCGATAGGTGTTTTGCCATGTGAACTTTTTGCCCATAGGTGGAAGGATGTGCTCCTGAAGCTTTGTACCTGTTGTGCAATTGAGGATAACCCTGATGATAGAGATGCCGAAGCACGAGTCAATGCTGTCAAAGGACTTGTGTCAGTGTGTGAAGCATTAGCTCAGGAAAAAGAACATTCTGGTATTGATACTGTGGAGGATGACATGTCTTTGTTCCTTCTCATCAAGGACGAAATAATGACGACTTTATTGAAAGCTCTTGATGACTATTCCGTTGATAACAGAGGTGATGTGGGTTCTTGGGTGCGTGAGGCTGCTATGGATGGCCTTGAGAGATGTACATATATACTATGCAAGAGAGATTCTGTTGGTCTCACTGCAAGATCAGGTCAAGTCGATTCTGGACTGGAGTTGCAGAACAGTGATGACAGTAACCAGTTGTATTCATTGCTTGATGCAAATCTTGCTGCCAGTATAGTTGGAGGAATATGTAAGCAAGCGGTAGAAAAGATGGATAAACTGAGAGAAGTAGCTGCAAAGGTGCTACAGAGGATTTTGTACAACAAGATAGCCTATGTCCCACGTATACCACACAGGAAAAAGTTGGAAGAAATTGTTCCTAATAAAGCTGATTTAAAGTGGGGGGTACCAGCTTTTTCATATCCTCGTTTTGTACAATTGCTTCAATTTGGCTGTTTTAGCAGATCAGTGCTATCTGGGTTGGTTATCTCTATTGGTGGGTTGCAAGATTTTTTAAGGAAGGCAGCACTCACAGCATTATTAGAGTATCTTCAAGTGGTAGAAAGTGAAGACCAGAAGGAAAGGTCCAGAGAGTATATGCTATCTACTGACATGCTTTGGGTTCTCCAGCAGTACAGGAGATTTGACAGAGTCATTGTGCCTGCATTGAAGACCATTGAGATTCTATTTAGCAAACAGATATTGTTGAGTATGGAGGCTCATACACTTGTTTTCTGTACCGGTGTTTTGGATTCTCTGGAAGTAGAATTAAAAGGGTCAAGGGATTTCTCCAAACTTTATGCAGGCATTGCAATACTTGGATATATTGCTTCAGTTTCGGAATCAATAAACACTCGGGCCTTCTCTCATCTTCTCAGTTTTCTAGGTCATCGCTATCCTAAGATACGGAAAGCTTCTGCTGAACAAGTTTACCTTGTCCTCTTGCAAAATGGGGGTCTTGTGGCCGAGGACAAGATAGAGAAAGCACTTGAAATTATTTCAGAAACCTGTTGGGAAGGTGACCTGGAAGCAGCGAAGATCCGTAGGCTAGAGTTGTATGATATGGCTAGTCTCGACACAGGTATACTTCAGAAGGCTAGTAGCAGAGTCTCAAATAAGGATGATAGCAGAAAGCCAACAGCAGATGAAAATGCATCGTATTCCTCGTTAGTTGAGTCATCTGGATTCTAA

Protein Analysis

1276

Amino Acids

141.26

Weight (kDa)

5.84

Isoelectric Point (pI)

42.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 3043
AccB1I GGYRCC 2 cut(s) 95, 3043
AccBSI CCGCTC 1 cut(s) 200
AccI GTMKAC 2 cut(s) 2983, 3721
AccII CGCG 2 cut(s) 183, 742
AciI CCGC 9 cut(s) 198, 284, 396, 883, 1282, 1493, 1662, 2046, 2897
AclWI GGATC 7 cut(s) 185, 205, 210, 1513, 1901, 2395, 3670
AcoI YGGCCR 3 cut(s) 1279, 1395, 3600
AcsI RAATTY 3 cut(s) 339, 1839, 2227
AcuI CTGAAG 4 cut(s) 2297, 2474, 3453, 3710
AcyI GRCGYC 1 cut(s) 96
AfiI CCNNNNNNNGG 2 cut(s) 1358, 2436
AflIII ACRYGT 3 cut(s) 181, 740, 2601
AgeI ACCGGT 1 cut(s) 3377
AjnI CCWGG 4 cut(s) 264, 1351, 2346, 3660
AjuI GAANNNNNNNTTGG 4 cut(s) 748, 780, 1049, 1081
AleI CACNNNNGTG 1 cut(s) 1250
Alw21I GWGCWC 2 cut(s) 114, 2451
Alw26I GTCTC 6 cut(s) 190, 462, 1783, 2774, 3713, 3751
AlwI GGATC 7 cut(s) 185, 205, 210, 1513, 1901, 2395, 3670
Ama87I CYCGRG 1 cut(s) 3492
AoxI GGCC 9 cut(s) 694, 759, 1279, 1395, 1617, 1881, 2722, 3495, 3600
ApoI RAATTY 3 cut(s) 339, 1839, 2227
ArsI GACNNNNNNTTYG 4 cut(s) 2499, 2531, 3577, 3609
AsiGI ACCGGT 1 cut(s) 3377
Asp700I GAANNNNTTC 2 cut(s) 2282, 3012
Asp718I GGTACC 1 cut(s) 3043
AspLEI GCGC 5 cut(s) 98, 303, 1044, 1980, 2202
AspS9I GGNCC 7 cut(s) 695, 1321, 1490, 1588, 1882, 3222, 3495
AsuC2I CCSGG 1 cut(s) 2146
AsuHPI GGTGA 7 cut(s) 83, 1341, 1373, 1648, 2339, 2696, 3668
AsuII TTCGAA 1 cut(s) 1483
AvaI CYCGRG 1 cut(s) 3492
AvaII GGWCC 4 cut(s) 1321, 1490, 1588, 3222
BaeGI GKGCMC 1 cut(s) 787
BanI GGYRCC 2 cut(s) 95, 3043
BarI GAAGNNNNNNTAC 2 cut(s) 3063, 3095
BauI CACGAG 2 cut(s) 1749, 2511
BbsI GAAGAC 3 cut(s) 1690, 3213, 3314
Bbv12I GWGCWC 2 cut(s) 114, 2451
BbvCI CCTCAGC 1 cut(s) 1878
BccI CCATC 8 cut(s) 37, 161, 483, 517, 802, 1358, 2714, 2902
BciT130I CCWGG 4 cut(s) 266, 1353, 2348, 3662
BciVI GTATCC 3 cut(s) 181, 392, 445
BclI TGATCA 1 cut(s) 936
BcnI CCSGG 1 cut(s) 2146
BcoDI GTCTC 6 cut(s) 190, 462, 1783, 2774, 3713, 3751
BfaI CTAG 7 cut(s) 600, 945, 1994, 3521, 3686, 3705, 3735
BfmI CTRYAG 5 cut(s) 846, 1524, 1642, 1656, 2942
BfoI RGCGCY 2 cut(s) 99, 1045
BfuI GTATCC 3 cut(s) 181, 392, 445
BglI GCCNNNNNGGC 2 cut(s) 104, 1403
BlpI GCTNAGC 1 cut(s) 1387
BmcAI AGTACT 1 cut(s) 122
Bme1390I CCNGG 5 cut(s) 266, 1353, 2146, 2348, 3662
Bme18I GGWCC 4 cut(s) 1321, 1490, 1588, 3222
BmeT110I CYCGRG 1 cut(s) 3492
BmgT120I GGNCC 7 cut(s) 695, 1321, 1490, 1588, 1882, 3222, 3495
BmiI GGNNCC 4 cut(s) 97, 573, 906, 3045
BmrFI CCNGG 5 cut(s) 266, 1353, 2146, 2348, 3662
BmrI ACTGGG 1 cut(s) 1236
BmsI GCATC 9 cut(s) 531, 962, 1100, 1510, 2245, 2248, 2491, 2842, 3800
BmuI ACTGGG 1 cut(s) 1236
BoxI GACNNNNGTC 1 cut(s) 2536
BpiI GAAGAC 3 cut(s) 1690, 3213, 3314
BpmI CTGGAG 3 cut(s) 287, 2825, 3248
Bpu10I CCTNAGC 2 cut(s) 1878, 2559
Bpu1102I GCTNAGC 1 cut(s) 1387
Bpu14I TTCGAA 1 cut(s) 1483
BpuEI CTTGAG 3 cut(s) 653, 1882, 2747
BpuMI CCSGG 1 cut(s) 2146
Bsa29I ATCGAT 1 cut(s) 2026
BsaAI YACGTR 1 cut(s) 2981
BsaBI GATNNNNATC 1 cut(s) 2856
BsaHI GRCGYC 1 cut(s) 96
BsaI GGTCTC 1 cut(s) 2774
BsaJI CCNNGG 5 cut(s) 9, 99, 622, 1981, 3603
BsaWI WCCGGW 2 cut(s) 831, 3377
BsaXI ACNNNNNCTCC 2 cut(s) 1310, 1340
Bsc4I CCNNNNNNNGG 2 cut(s) 1358, 2436
Bse118I RCCGGY 1 cut(s) 3377
Bse1I ACTGG 7 cut(s) 861, 1108, 1231, 2329, 2808, 2833, 2868
Bse3DI GCAATG 5 cut(s) 603, 955, 965, 2843, 3444
Bse8I GATNNNNATC 1 cut(s) 2856
BseBI CCWGG 4 cut(s) 266, 1353, 2348, 3662
BseCI ATCGAT 1 cut(s) 2026
BseDI CCNNGG 5 cut(s) 9, 99, 622, 1981, 3603
BseJI GATNNNNATC 1 cut(s) 2856
BseLI CCNNNNNNNGG 2 cut(s) 1358, 2436
BseMI GCAATG 5 cut(s) 603, 955, 965, 2843, 3444
BseMII CTCAG 7 cut(s) 1122, 1158, 1869, 2261, 2573, 2909, 3526
BseNI ACTGG 7 cut(s) 861, 1108, 1231, 2329, 2808, 2833, 2868
BseRI GAGGAG 2 cut(s) 633, 1331
BseSI GKGCMC 1 cut(s) 787
BseYI CCCAGC 1 cut(s) 2000
BsgI GTGCAG 2 cut(s) 345, 1875
Bsh1236I CGCG 2 cut(s) 183, 742
Bsh1285I CGRYCG 1 cut(s) 1630
BshFI GGCC 9 cut(s) 696, 761, 1281, 1397, 1619, 1883, 2724, 3497, 3602
BshNI GGYRCC 2 cut(s) 95, 3043
BshTI ACCGGT 1 cut(s) 3377
BshVI ATCGAT 1 cut(s) 2026
BsiEI CGRYCG 1 cut(s) 1630
BsiHKAI GWGCWC 2 cut(s) 114, 2451
BsiHKCI CYCGRG 1 cut(s) 3492
BsiSI CCGG 3 cut(s) 832, 2146, 3378
BsiWI CGTACG 1 cut(s) 704
BslFI GGGAC 1 cut(s) 2960
BslI CCNNNNNNNGG 2 cut(s) 1358, 2436
BsmAI GTCTC 6 cut(s) 190, 462, 1783, 2774, 3713, 3751
BsmBI CGTCTC 1 cut(s) 190
BsmFI GGGAC 1 cut(s) 2960
BsnI GGCC 9 cut(s) 696, 761, 1281, 1397, 1619, 1883, 2724, 3497, 3602
Bso31I GGTCTC 1 cut(s) 2774
BsoBI CYCGRG 1 cut(s) 3492
Bsp119I TTCGAA 1 cut(s) 1483
Bsp1286I GDGCHC 3 cut(s) 114, 787, 2451
Bsp1407I TGTACA 3 cut(s) 2735, 2955, 3070
Bsp1720I GCTNAGC 1 cut(s) 1387
Bsp19I CCATGG 2 cut(s) 9, 1981
BspACI CCGC 9 cut(s) 198, 284, 396, 883, 1282, 1493, 1662, 2046, 2897
BspANI GGCC 9 cut(s) 696, 761, 1281, 1397, 1619, 1883, 2724, 3497, 3602
BspCNI CTCAG 7 cut(s) 1123, 1157, 1870, 2260, 2572, 2910, 3525
BspDI ATCGAT 1 cut(s) 2026
BspFNI CGCG 2 cut(s) 183, 742
BspLI GGNNCC 4 cut(s) 97, 573, 906, 3045
BspMAI CTGCAG 2 cut(s) 1528, 1660
BspPI GGATC 7 cut(s) 185, 205, 210, 1513, 1901, 2395, 3670
BspQI GCTCTTC 1 cut(s) 1642
BspT104I TTCGAA 1 cut(s) 1483
BspT107I GGYRCC 2 cut(s) 95, 3043
BspTNI GGTCTC 1 cut(s) 2774
BsrBI CCGCTC 1 cut(s) 200
BsrDI GCAATG 5 cut(s) 603, 955, 965, 2843, 3444
BsrFI RCCGGY 1 cut(s) 3377
BsrGI TGTACA 3 cut(s) 2735, 2955, 3070
BsrI ACTGG 7 cut(s) 861, 1108, 1231, 2329, 2808, 2833, 2868
BssAI RCCGGY 1 cut(s) 3377
BssECI CCNNGG 5 cut(s) 9, 99, 622, 1981, 3603
BssNAI GTATAC 2 cut(s) 2984, 3722
BssNI GRCGYC 1 cut(s) 96
BssSI CACGAG 2 cut(s) 1749, 2511
BssT1I CCWWGG 4 cut(s) 9, 99, 622, 1981
Bst1107I GTATAC 2 cut(s) 2984, 3722
Bst2BI CACGAG 2 cut(s) 1749, 2511
Bst2UI CCWGG 4 cut(s) 266, 1353, 2348, 3662
Bst6I CTCTTC 4 cut(s) 1197, 1480, 1642, 2377
BstACI GRCGYC 1 cut(s) 96
BstAPI GCANNNNNTGC 4 cut(s) 860, 1928, 2861, 3446
BstAUI TGTACA 3 cut(s) 2735, 2955, 3070
BstBAI YACGTR 1 cut(s) 2981
BstBI TTCGAA 1 cut(s) 1483
BstDSI CCRYGG 2 cut(s) 9, 1981
BstEII GGTNACC 1 cut(s) 3656
BstFNI CGCG 2 cut(s) 183, 742
BstH2I RGCGCY 2 cut(s) 99, 1045
BstHHI GCGC 5 cut(s) 98, 303, 1044, 1980, 2202
BstMAI GTCTC 6 cut(s) 190, 462, 1783, 2774, 3713, 3751
BstMCI CGRYCG 1 cut(s) 1630
BstNI CCWGG 4 cut(s) 266, 1353, 2348, 3662
BstNSI RCATGY 4 cut(s) 754, 1978, 2605, 3253
BstPAI GACNNNNGTC 1 cut(s) 2536
BstPI GGTNACC 1 cut(s) 3656
BstSCI CCNGG 5 cut(s) 264, 1351, 2144, 2346, 3660
BstSFI CTRYAG 5 cut(s) 846, 1524, 1642, 1656, 2942
BstSLI GKGCMC 1 cut(s) 787
BstUI CGCG 2 cut(s) 183, 742
BstV2I GAAGAC 3 cut(s) 1690, 3213, 3314
BstX2I RGATCY 3 cut(s) 210, 1505, 3675
BstYI RGATCY 3 cut(s) 210, 1505, 3675
BstZ17I GTATAC 2 cut(s) 2984, 3722
Bsu15I ATCGAT 1 cut(s) 2026
BsuI GTATCC 3 cut(s) 181, 392, 445
BsuRI GGCC 9 cut(s) 696, 761, 1281, 1397, 1619, 1883, 2724, 3497, 3602
BsuTUI ATCGAT 1 cut(s) 2026
BtgI CCRYGG 2 cut(s) 9, 1981
BtgZI GCGATG 1 cut(s) 3512
BtsI GCAGTG 4 cut(s) 114, 497, 2180, 2772
CfoI GCGC 5 cut(s) 98, 303, 1044, 1980, 2202
Cfr10I RCCGGY 1 cut(s) 3377
Cfr13I GGNCC 7 cut(s) 695, 1321, 1490, 1588, 1882, 3222, 3495
ClaI ATCGAT 1 cut(s) 2026
CseI GACGC 5 cut(s) 172, 189, 318, 731, 2298
CspAI ACCGGT 1 cut(s) 3377
CspCI CAANNNNNGTGG 2 cut(s) 859, 894
DinI GGCGCC 1 cut(s) 97
DraI TTTAAA 1 cut(s) 3033
EaeI YGGCCR 3 cut(s) 1279, 1395, 3600
Eam1104I CTCTTC 4 cut(s) 1197, 1480, 1642, 2377
EarI CTCTTC 4 cut(s) 1197, 1480, 1642, 2377
EciI GGCGGA 1 cut(s) 898
Eco130I CCWWGG 4 cut(s) 9, 99, 622, 1981
Eco147I AGGCCT 1 cut(s) 761
Eco31I GGTCTC 1 cut(s) 2774
Eco32I GATATC 1 cut(s) 583
Eco47I GGWCC 4 cut(s) 1321, 1490, 1588, 3222
Eco57I CTGAAG 4 cut(s) 2297, 2474, 3453, 3710
Eco88I CYCGRG 1 cut(s) 3492
Eco91I GGTNACC 1 cut(s) 3656
EcoO109I RGGNCCY 3 cut(s) 695, 1321, 1882
EcoO65I GGTNACC 1 cut(s) 3656
EcoRII CCWGG 4 cut(s) 264, 1351, 2346, 3660
EcoRV GATATC 1 cut(s) 583
EcoT14I CCWWGG 4 cut(s) 9, 99, 622, 1981
EcoT22I ATGCAT 2 cut(s) 955, 3793
EgeI GGCGCC 1 cut(s) 97
EheI GGCGCC 1 cut(s) 97
ErhI CCWWGG 4 cut(s) 9, 99, 622, 1981
Esp3I CGTCTC 1 cut(s) 190
FalI AAGNNNNNCTT 8 cut(s) 140, 172, 666, 698, 2085, 2117, 3555, 3587
FaqI GGGAC 1 cut(s) 2960
FauI CCCGC 1 cut(s) 291
FbaI TGATCA 1 cut(s) 936
FblI GTMKAC 2 cut(s) 2983, 3721
FspBI CTAG 7 cut(s) 600, 945, 1994, 3521, 3686, 3705, 3735
GlaI GCGC 5 cut(s) 97, 302, 1043, 1979, 2201
GsaI CCCAGC 1 cut(s) 2004
GsuI CTGGAG 3 cut(s) 287, 2825, 3248
HaeII RGCGCY 2 cut(s) 99, 1045
HaeIII GGCC 9 cut(s) 696, 761, 1281, 1397, 1619, 1883, 2724, 3497, 3602
HapII CCGG 3 cut(s) 832, 2146, 3378
HgaI GACGC 5 cut(s) 172, 189, 318, 731, 2298
HhaI GCGC 5 cut(s) 98, 303, 1044, 1980, 2202
Hin1I GRCGYC 1 cut(s) 96
Hin6I GCGC 5 cut(s) 96, 301, 1042, 1978, 2200
HinP1I GCGC 5 cut(s) 96, 301, 1042, 1978, 2200
HindIII AAGCTT 3 cut(s) 731, 2456, 3549
HpaII CCGG 3 cut(s) 832, 2146, 3378
HphI GGTGA 7 cut(s) 83, 1341, 1373, 1648, 2339, 2696, 3668
Hpy166II GTNNAC 6 cut(s) 1639, 1756, 2420, 2984, 3568, 3722
Hpy8I GTNNAC 6 cut(s) 1639, 1756, 2420, 2984, 3568, 3722
Hpy99I CGWCG 1 cut(s) 89
HpyCH4IV ACGT 2 cut(s) 1764, 2980
HpySE526I ACGT 2 cut(s) 1764, 2980
Hsp92I GRCGYC 1 cut(s) 96
HspAI GCGC 5 cut(s) 96, 301, 1042, 1978, 2200
KasI GGCGCC 1 cut(s) 95
KpnI GGTACC 1 cut(s) 3047
Ksp22I TGATCA 1 cut(s) 936
LguI GCTCTTC 1 cut(s) 1642
LmnI GCTCC 8 cut(s) 117, 205, 308, 646, 842, 1339, 1985, 2454
LweI GCATC 9 cut(s) 531, 962, 1100, 1510, 2245, 2248, 2491, 2842, 3800
MaeI CTAG 7 cut(s) 600, 945, 1994, 3521, 3686, 3705, 3735
MaeII ACGT 2 cut(s) 1764, 2980
MaeIII GTNAC 9 cut(s) 385, 495, 617, 834, 1218, 1694, 2178, 2828, 3656
MbiI CCGCTC 1 cut(s) 200
MfeI CAATTG 2 cut(s) 2475, 3074
MflI RGATCY 3 cut(s) 210, 1505, 3675
MhlI GDGCHC 3 cut(s) 114, 787, 2451
MluI ACGCGT 2 cut(s) 181, 740
Mly113I GGCGCC 1 cut(s) 96
MlyI GAGTC 4 cut(s) 2523, 3297, 3753, 3821
MmeI TCCRAC 5 cut(s) 462, 1483, 1660, 2857, 2982
Mph1103I ATGCAT 2 cut(s) 955, 3793
MroXI GAANNNNTTC 2 cut(s) 2282, 3012
MseI TTAA 9 cut(s) 345, 354, 992, 1899, 2220, 2268, 3032, 3152, 3407
MslI CAYNNNNRTG 4 cut(s) 36, 1036, 1250, 2028
MspA1I CMGCKG 6 cut(s) 286, 1161, 1655, 2000, 2048, 2138
MspI CCGG 3 cut(s) 832, 2146, 3378
MspR9I CCNGG 5 cut(s) 266, 1353, 2146, 2348, 3662
MunI CAATTG 2 cut(s) 2475, 3074
MvaI CCWGG 4 cut(s) 266, 1353, 2348, 3662
MvnI CGCG 2 cut(s) 183, 742
NarI GGCGCC 1 cut(s) 96
NciI CCSGG 1 cut(s) 2146
NcoI CCATGG 2 cut(s) 9, 1981
NlaIV GGNNCC 4 cut(s) 97, 573, 906, 3045
NmeAIII GCCGAG 1 cut(s) 3628
NmuCI GTSAC 4 cut(s) 385, 495, 2178, 3656
NsiI ATGCAT 2 cut(s) 955, 3793
NspI RCATGY 4 cut(s) 754, 1978, 2605, 3253
NspV TTCGAA 1 cut(s) 1483
OliI CACNNNNGTG 1 cut(s) 1250
PaeI GCATGC 1 cut(s) 1978
PceI AGGCCT 1 cut(s) 761
PciI ACATGT 1 cut(s) 2601
PciSI GCTCTTC 1 cut(s) 1642
PcsI WCGNNNNNNNCGW 2 cut(s) 2104, 3800
PdmI GAANNNNTTC 2 cut(s) 2282, 3012
PfeI GAWTC 8 cut(s) 1136, 2251, 2759, 2795, 3319, 3389, 3479, 3822
Pfl23II CGTACG 1 cut(s) 704
PflFI GACNNNGTC 1 cut(s) 3287
PinAI ACCGGT 1 cut(s) 3377
Ple19I CGATCG 1 cut(s) 1630
PleI GAGTC 4 cut(s) 2522, 3296, 3752, 3820
PluTI GGCGCC 1 cut(s) 99
PpsI GAGTC 4 cut(s) 2522, 3296, 3752, 3820
Ppu21I YACGTR 1 cut(s) 2981
PpuMI RGGWCCY 1 cut(s) 1321
PscI ACATGT 1 cut(s) 2601
PshAI GACNNNNGTC 1 cut(s) 2536
Psp5II RGGWCCY 1 cut(s) 1321
Psp6I CCWGG 4 cut(s) 264, 1351, 2346, 3660
PspEI GGTNACC 1 cut(s) 3656
PspFI CCCAGC 1 cut(s) 2000
PspGI CCWGG 4 cut(s) 264, 1351, 2346, 3660
PspLI CGTACG 1 cut(s) 704
PspN4I GGNNCC 4 cut(s) 97, 573, 906, 3045
PspPI GGNCC 7 cut(s) 695, 1321, 1490, 1588, 1882, 3222, 3495
PspPPI RGGWCCY 1 cut(s) 1321
PstI CTGCAG 2 cut(s) 1528, 1660
PsuI RGATCY 3 cut(s) 210, 1505, 3675
PsyI GACNNNGTC 1 cut(s) 3287
PvuI CGATCG 1 cut(s) 1630
PvuII CAGCTG 4 cut(s) 1161, 1655, 2000, 2138
RseI CAYNNNNRTG 4 cut(s) 36, 1036, 1250, 2028
SapI GCTCTTC 1 cut(s) 1642
SaqAI TTAA 9 cut(s) 345, 354, 992, 1899, 2220, 2268, 3032, 3152, 3407
Sau96I GGNCC 7 cut(s) 695, 1321, 1490, 1588, 1882, 3222, 3495
ScaI AGTACT 1 cut(s) 122
SchI GAGTC 4 cut(s) 2523, 3297, 3753, 3821
ScrFI CCNGG 5 cut(s) 266, 1353, 2146, 2348, 3662
SduI GDGCHC 3 cut(s) 114, 787, 2451
SfaNI GCATC 9 cut(s) 531, 962, 1100, 1510, 2245, 2248, 2491, 2842, 3800
SfcI CTRYAG 5 cut(s) 846, 1524, 1642, 1656, 2942
SfoI GGCGCC 1 cut(s) 97
SfuI TTCGAA 1 cut(s) 1483
SinI GGWCC 4 cut(s) 1321, 1490, 1588, 3222
SmiMI CAYNNNNRTG 4 cut(s) 36, 1036, 1250, 2028
SmlI CTYRAG 3 cut(s) 632, 1861, 2726
SmoI CTYRAG 3 cut(s) 632, 1861, 2726
SphI GCATGC 1 cut(s) 1978
SseBI AGGCCT 1 cut(s) 761
SsiI CCGC 9 cut(s) 198, 284, 396, 883, 1282, 1493, 1662, 2046, 2897
SspDI GGCGCC 1 cut(s) 95
SspMI CTAG 7 cut(s) 600, 945, 1994, 3521, 3686, 3705, 3735
StuI AGGCCT 1 cut(s) 761
StyD4I CCNGG 5 cut(s) 264, 1351, 2144, 2346, 3660
StyI CCWWGG 4 cut(s) 9, 99, 622, 1981
TaiI ACGT 2 cut(s) 1767, 2983
TaqI TCGA 7 cut(s) 579, 958, 1483, 2026, 2154, 2793, 3711
TatI WGTACW 8 cut(s) 120, 512, 1952, 2077, 2735, 2955, 3070, 3270
TauI GCSGC 2 cut(s) 1284, 1664
TfiI GAWTC 8 cut(s) 1136, 2251, 2759, 2795, 3319, 3389, 3479, 3822
Tru1I TTAA 9 cut(s) 345, 354, 992, 1899, 2220, 2268, 3032, 3152, 3407
Tru9I TTAA 9 cut(s) 345, 354, 992, 1899, 2220, 2268, 3032, 3152, 3407
TseFI GTSAC 4 cut(s) 385, 495, 2178, 3656
Tsp45I GTSAC 4 cut(s) 385, 495, 2178, 3656
TspGWI ACGGA 6 cut(s) 564, 1256, 1423, 2659, 3559, 3668
Tth111I GACNNNGTC 1 cut(s) 3287
VpaK11BI GGWCC 4 cut(s) 1321, 1490, 1588, 3222
XapI RAATTY 3 cut(s) 339, 1839, 2227
XceI RCATGY 4 cut(s) 754, 1978, 2605, 3253
XmiI GTMKAC 2 cut(s) 2983, 3721
XmnI GAANNNNTTC 2 cut(s) 2282, 3012
XspI CTAG 7 cut(s) 600, 945, 1994, 3521, 3686, 3705, 3735
ZrmI AGTACT 1 cut(s) 122
Zsp2I ATGCAT 2 cut(s) 955, 3793
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.