RLG00000029165

Tubulin-folding cofactor

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
33919901 .. 33929499
9599 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029165

Sequence Viewer

Length: 3825 bp
ATGGCAGGCTTAGCCCCAAAGAAGCAGAAGGAGAAGGAAGAGTCGGAGTCGGCAGTTGCAGTTGCAGTGGGTGAAGAAGAAGAAGACGACGAGTACGGCGCCAAGGAGGCAGTGCTCCAAAAGTACTTCCTTCAGGAATGGAAGCTCGTCAAGTCCATCTTAGACGACATCGTTTCGCACAAGCGCGTCTCCGATCCCTCTGCTCCCCACAAGATCCGATCCATTATGGACAAGTATCAAGAACAGGGTCAGTTGGTCGAGCCTTACCTGGAGAGCATTGTTTCTCCCCTCATGTTTATCGTCCGCTCTAAGACAGTTGAATTAGGAGTGGCTTCAAACAAGATTCTTCAAGTAATTAAGCCTATATGCATCATTATCTACTCTCTGGTCACAGTTTGCGGGTACAAGGCCGTCGTCAGGTTCTTCCCGCATCAAGTTTCAGACTTGGAACTTGCTGTGTCTCTCTTGGAGAAGTGCGACCACACAACTTCAGTATCATCATTGCGGCAGGAAAGTACAGGAGAGATGGAGGCCAAATGTGTGATACTTTTGTGGCTCTCAATACTTGTGTTGGTTCCGTTTGATATCTCCACTGTTGATACTAGCATTGCAAACAACAGCAATCTTGGTAAACTTGAACCAGCTCCGCTGGTATTGAGAATAACAGGGATATCTAAGGATTACCTTTCAAATGCTGGTCCTATGCGCACTATAGCTGCTTTGTTGCTCTCAAAGCTTCTAACACGTCCAGACATGCCAAAGGCCTTTTCCAGCTTCGTTGAATGGACACATGAAGTCCTATCCTCTCTCACAGATGATGTCATGAATCACTTTCAGTTACTTGGAGCTTTAGAAGCCCTGGCTGCTATATTCAAGGCTGGTGGGCGGAAACTCTTGCTTGATGTGGTTCCTATTGTCTGGGATGACATCTCATTGTTGATCAAGTCTAGCTATGCAGCTAAGAGTCCATTGCTTCGCAAGTATCTGATGAAATTAACTCAGAGGATAGGGCTTACTTGCCTCCCTCATCGTTCACCTTCCTGGCGCTATGTGGGGAAAACAAACTCGCTGGGAGAGAACATTTATTTGTCTGCATCAGGGAAAGCTGGCGAATGCAATGATGCTACAAATGCCAAGGATTTAAATTCAGAACCAAGTTCAACTTGCGCGGAAGATGAAGAAATGGATGTTCCAGAAATTGTAGAGGAGATTATTGAGATGTTACTCACTGGACTGAGAGATACGGACACTGTTGTACGTTGGTCTGCTGCAAAAGGTATTGGTCGCACTACTTCACGTCTTACAGCTGCCCTTTCAGAGGAGGTCCTATCATCAGTTTTGGAGCTGTTTTCGGCAGGCGAGGGTGATGGGTCATGGCATGGAGGTTGCTTAGCTTTGGCTGAATTGGCACGCAGAGGATTGCTCTTACCTGTCAGCCTTCCTAAAGTTGTACCTGTTGTTGTGAAGGCGCTACATTATGATATTCGAAGAGGTCCACACAGTGTTGGATCTCATGTACGAGATGCTGCAGCTTATGTTTGTTGGGCTTTTGGTCGTGCATACTATCATACAGATATGAGAAATATATTGGATCAGCTTGCGCCACACCTTCTAACAGTGGCCTGCTATGACCGTGAGGTTAATTGTAGAAGAGCAGCAGCAGCAGCTTTTCAGGAAAATGTTGGGAGACAGGGTAGTTACCCTCATGGAATTGACATAGTGAACACTGCAGACTATTTTTCACTTTCTTCACGAGCAAACTCTTATATTCATGTTGCTGTCTCTATCGCTCAATATGAGGGATATCTTTATCCCTTTGTGGATGAGCTACTGTATAACAAAATTTGTCACTGGGAGAAAGGCTTAAGAGAACTTGCTGCCGAGGCTCTCTCTTCTCTTGTTAAATATGATCCTGAATATTTTGCAAACTATGCTTTGGAGAAAATAATTCCTTGTACTCTCTCATCTGATCTGTGCATGCGCCATGGAGCGACACTGGCAACTGGAGAACTTGTTTTAGCACTACATCAATGTGATTATGCTCTTTCCGCTGATAAACAAAAACATGTTGCTGGTGTTGTACCTGGTATTGCGAAAGCACGCCTTTATCGCGGGAAAGGTGGAGAGATTATGCGCTCAGCTGTTTCCCGCTTCATAGAATGTATATCTGTATCTTCTGTGTCGTTACCAGAAAAGATAAAGCGCAGTTTGCTTGATACTCTTAATGAGAACTTGAGACATCCTAATTCTCAGATTCAGGATGCAGCAGTTAAAGCTCTGAAGCACTTTGTGCAAGCATATCTAATTGCTGCAGATGTTGGAGGTGCTAGTATAACATCCAAGTACCTGGAACTGTTGACTGATCCAAATGTGGCTGTAAGAAGAGGATCAGCATTGGCAATAGGTGTTTTGCCCTGCAAACTTCTTGCCAATAGGTGGAAGGATGTGCTTCTGAAGCTTTGTAACTCTTGTGCAATTGAGGACAACCCTGATGATAGAGACGCGGAAGCACGAGTAAATGCAGTCAAAGGGCTTGTTTCAGTATGTGAAGCATTAACTCAGGAAAAGGAGCATTCTGGAGTCCCATTGATCGAGGATGACATGTCTTTGTTCCTTCTTATCAAGGATAGAATAATGACAGCTTTATTGAAAGCTCTTGATGACTATTCTGTGGATAACAGAGGTGATGTGGGTTCTTGGGTCCGCGAGGCTGCTATGAATGGCCTTGAGAGATGTACATATATCCTGTGCAAGAGAGATTGTATTGGTCTGAGTGGAAGATCAGGTGGAATTGATTCTGCTATTGAGCTGGAGCCCAATGCTGACAATCACCAGTTACATTTGTTGTTTGATGCAAATCTTGCTACCAGTATAGTTGGGGGAATATGTAAGCAAGCTGTAGAGAAGATGGATAAACTGAGAGAAGCAGCTGCAAAGGTGCTACAGAGAATTTTGTACAATAATGTAGCTTACGTCGAACATATACCACACAGGAAAAAGTTGGAAGAAATTGTTCCTAATGAAGCTGACTTAAAGTGGGGGGTACCAACCTTTTCGTATCCTCGTTTTGTGCAATTGCTTCAGTTTGGCTGTTATAGCAGATCAGTGGTATCTGGGTTAGTTATCTCTATTGGTGGGTTGCAAGATTCTTTGAGGAAGGCATCACTCACAGCATTGTTAGAGTATCTTCAAGTGGTATTAAGTGAAGACCAGAATGAAAAGTCCAGAGAGTATATGCTGTCTACTGACATGCTTTGGGTTCTCGAACACTATAGGAGATGTGACAGAGTCATTGTACCTTTATTGAAGACCATTGAGATTCTTTTCAGCAAAAGGATATTCTTGACTATGGAGAGTCAAACAGTGGTTTTCTGTGCTGGTGCTTTGGATTCTCTGGAAGTTGAATTAAAAGGATCAAAGGACTTTTCCAAGCTATATGCAGGCATTGCAATACTTGGATATATAGCTTCAGTTTCTGATTCCATAAATAGTCGGGCCTTCTCTCAGCTTCTCCGTTTTCTAGGTCATCGTTACCCTAAGATACGGAAAGCTTCTGCTGAACAAGTTTACCTTGTTCTCTTGCAAAATGAGGGTCTCGTGGCTGAAGACAAGATTGACAAAGCGCTTGAAATTATTTCAGAAACCTGCTGGGAAGGTGATACTGAAGCAGCAAAGCTCCAACGGTTCGAGTTATATGATATGGCTGGTCTTGACACAGATCAGATTCGTAAGACTAGTAACAGAGTATCAACTGGTAACAGAAGTGCAACAGTCACTGATGAAAATGCATCTTATTCCTCGTTAGTCGACTCAAGTGGGTTCTAA

Protein Analysis

1275

Amino Acids

140.77

Weight (kDa)

5.87

Isoelectric Point (pI)

41.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARM_TBCD PF23579 76 - 266 1.1e-53 Tubulin-specific chaperone D-like, ARM repeat
ARM_TBCD_2nd PF25767 324 - 571 4.9e-108 Tubulin-specific chaperone D-like, ARM repeats
TFCD_C PF12612 957 - 1144 5e-56 Tubulin folding cofactor D C terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 707
Acc36I ACCTGC 1 cut(s) 3653
Acc65I GGTACC 1 cut(s) 3043
AccB1I GGYRCC 2 cut(s) 98, 3043
AccB7I CCANNNNNTGG 1 cut(s) 2436
AccBSI CCGCTC 1 cut(s) 306
AccI GTMKAC 2 cut(s) 3242, 3807
AccII CGCG 5 cut(s) 186, 1169, 2112, 2504, 2706
AclWI GGATC 9 cut(s) 188, 208, 213, 1516, 1599, 1904, 2357, 2395, 3421
AcsI RAATTY 3 cut(s) 1144, 1842, 2949
AcuI CTGAAG 8 cut(s) 116, 474, 2300, 2474, 3065, 3453, 3624, 3684
AcyI GRCGYC 1 cut(s) 99
AdeI CACNNNGTG 2 cut(s) 1502, 2290
AfeI AGCGCT 1 cut(s) 3624
AfiI CCNNNNNNNGG 3 cut(s) 417, 1318, 2436
AflII CTTAAG 1 cut(s) 1864
AflIII ACRYGT 3 cut(s) 743, 2065, 2601
AhlI ACTAGT 1 cut(s) 3734
AjiI CACGTC 2 cut(s) 746, 1298
AjnI CCWGG 5 cut(s) 267, 858, 1040, 2083, 2346
AjuI GAANNNNNNNTTGG 2 cut(s) 751, 783
Alw21I GWGCWC 1 cut(s) 117
Alw26I GTCTC 7 cut(s) 193, 465, 1681, 1786, 2230, 2493, 3599
AlwI GGATC 9 cut(s) 188, 208, 213, 1516, 1599, 1904, 2357, 2395, 3421
AlwNI CAGNNNCTG 2 cut(s) 3476, 3776
Aor51HI AGCGCT 1 cut(s) 3624
AoxI GGCC 6 cut(s) 408, 531, 762, 1620, 2722, 3495
ApoI RAATTY 3 cut(s) 1144, 1842, 2949
ArsI GACNNNNNNTTYG 2 cut(s) 3577, 3609
Asp700I GAANNNNTTC 2 cut(s) 2794, 3012
Asp718I GGTACC 1 cut(s) 3043
AspS9I GGNCC 5 cut(s) 698, 1324, 1493, 2701, 3495
AsuHPI GGTGA 6 cut(s) 83, 1026, 1376, 2696, 2822, 3668
AsuII TTCGAA 1 cut(s) 1486
AvaII GGWCC 4 cut(s) 698, 1324, 1493, 2701
BaeI ACNNNNGTAYC 4 cut(s) 477, 510, 536, 569
BanI GGYRCC 2 cut(s) 98, 3043
BanII GRGCYC 1 cut(s) 2817
BauI CACGAG 3 cut(s) 1752, 2511, 3596
BbsI GAAGAC 4 cut(s) 90, 3213, 3314, 3612
Bbv12I GWGCWC 1 cut(s) 117
BccI CCATC 4 cut(s) 164, 520, 1361, 2902
BceAI ACGGC 2 cut(s) 112, 395
BcgI CGANNNNNNTGC 2 cut(s) 182, 216
BciT130I CCWGG 5 cut(s) 269, 860, 1042, 2085, 2348
BciVI GTATCC 1 cut(s) 3069
BclI TGATCA 1 cut(s) 939
BcoDI GTCTC 7 cut(s) 193, 465, 1681, 1786, 2230, 2493, 3599
BcuI ACTAGT 1 cut(s) 3734
BfaI CTAG 5 cut(s) 603, 948, 2328, 3521, 3735
BfmI CTRYAG 7 cut(s) 711, 1527, 1728, 2310, 2898, 2942, 3271
BfoI RGCGCY 4 cut(s) 102, 1048, 1472, 3626
BfrI CTTAAG 1 cut(s) 1864
BfuAI ACCTGC 1 cut(s) 3653
BfuI GTATCC 1 cut(s) 3069
BglI GCCNNNNNGGC 1 cut(s) 107
BlpI GCTNAGC 3 cut(s) 10, 1390, 2137
BmcAI AGTACT 1 cut(s) 125
Bme1390I CCNGG 5 cut(s) 269, 860, 1042, 2085, 2348
Bme18I GGWCC 4 cut(s) 698, 1324, 1493, 2701
BmgBI CACGTC 2 cut(s) 746, 1298
BmgT120I GGNCC 5 cut(s) 698, 1324, 1493, 2701, 3495
BmiI GGNNCC 6 cut(s) 100, 576, 909, 2702, 2814, 3045
BmrFI CCNGG 5 cut(s) 269, 860, 1042, 2085, 2348
BmrI ACTGGG 1 cut(s) 1861
BmsI GCATC 9 cut(s) 378, 439, 1103, 1111, 1513, 2251, 2842, 3170, 3797
BmuI ACTGGG 1 cut(s) 1861
BpiI GAAGAC 4 cut(s) 90, 3213, 3314, 3612
BplI GAGNNNNNCTC 4 cut(s) 1407, 1439, 1874, 1906
BpmI CTGGAG 4 cut(s) 290, 2025, 2598, 2831
Bpu1102I GCTNAGC 3 cut(s) 10, 1390, 2137
Bpu14I TTCGAA 1 cut(s) 1486
BpuEI CTTGAG 3 cut(s) 2254, 2747, 3796
BsaBI GATNNNNATC 1 cut(s) 2856
BsaHI GRCGYC 1 cut(s) 99
BsaI GGTCTC 1 cut(s) 3599
BsaJI CCNNGG 5 cut(s) 102, 858, 1134, 1881, 1984
BsaXI ACNNNNNCTCC 4 cut(s) 1678, 1708, 1998, 2028
Bsc4I CCNNNNNNNGG 3 cut(s) 417, 1318, 2436
Bse1I ACTGG 7 cut(s) 1234, 1856, 2001, 2008, 2833, 2868, 3757
Bse3DI GCAATG 5 cut(s) 500, 606, 968, 1123, 3444
Bse8I GATNNNNATC 1 cut(s) 2856
BseBI CCWGG 5 cut(s) 269, 860, 1042, 2085, 2348
BseDI CCNNGG 5 cut(s) 102, 858, 1134, 1881, 1984
BseGI GGATG 8 cut(s) 928, 1192, 1828, 2239, 2266, 2336, 2449, 2602
BseJI GATNNNNATC 1 cut(s) 2856
BseLI CCNNNNNNNGG 3 cut(s) 417, 1318, 2436
BseMI GCAATG 5 cut(s) 500, 606, 968, 1123, 3444
BseMII CTCAG 8 cut(s) 1013, 1226, 2151, 2264, 2573, 2762, 2909, 3518
BseNI ACTGG 7 cut(s) 1234, 1856, 2001, 2008, 2833, 2868, 3757
BseRI GAGGAG 2 cut(s) 1220, 1334
BseYI CCCAGC 2 cut(s) 1069, 3648
Bsh1236I CGCG 5 cut(s) 186, 1169, 2112, 2504, 2706
BshFI GGCC 6 cut(s) 410, 533, 764, 1622, 2724, 3497
BshNI GGYRCC 2 cut(s) 98, 3043
BsiHKAI GWGCWC 1 cut(s) 117
BslFI GGGAC 1 cut(s) 2567
BslI CCNNNNNNNGG 3 cut(s) 417, 1318, 2436
BsmAI GTCTC 7 cut(s) 193, 465, 1681, 1786, 2230, 2493, 3599
BsmBI CGTCTC 2 cut(s) 193, 2493
BsmFI GGGAC 1 cut(s) 2567
BsmI GAATGC 2 cut(s) 1118, 2572
BsnI GGCC 6 cut(s) 410, 533, 764, 1622, 2724, 3497
Bso31I GGTCTC 1 cut(s) 3599
Bsp119I TTCGAA 1 cut(s) 1486
Bsp1286I GDGCHC 2 cut(s) 117, 2817
Bsp1407I TGTACA 2 cut(s) 2735, 2955
Bsp1720I GCTNAGC 3 cut(s) 10, 1390, 2137
Bsp19I CCATGG 1 cut(s) 1984
BspANI GGCC 6 cut(s) 410, 533, 764, 1622, 2724, 3497
BspCNI CTCAG 8 cut(s) 1012, 1227, 2150, 2263, 2572, 2763, 2910, 3517
BspFNI CGCG 5 cut(s) 186, 1169, 2112, 2504, 2706
BspHI TCATGA 1 cut(s) 822
BspLI GGNNCC 6 cut(s) 100, 576, 909, 2702, 2814, 3045
BspMAI CTGCAG 3 cut(s) 1531, 1732, 2314
BspMI ACCTGC 1 cut(s) 3653
BspPI GGATC 9 cut(s) 188, 208, 213, 1516, 1599, 1904, 2357, 2395, 3421
BspQI GCTCTTC 1 cut(s) 1645
BspT104I TTCGAA 1 cut(s) 1486
BspT107I GGYRCC 2 cut(s) 98, 3043
BspTI CTTAAG 1 cut(s) 1864
BspTNI GGTCTC 1 cut(s) 3599
BsrBI CCGCTC 1 cut(s) 306
BsrDI GCAATG 5 cut(s) 500, 606, 968, 1123, 3444
BsrGI TGTACA 2 cut(s) 2735, 2955
BsrI ACTGG 7 cut(s) 1234, 1856, 2001, 2008, 2833, 2868, 3757
BssECI CCNNGG 5 cut(s) 102, 858, 1134, 1881, 1984
BssNI GRCGYC 1 cut(s) 99
BssSI CACGAG 3 cut(s) 1752, 2511, 3596
BssT1I CCWWGG 3 cut(s) 102, 1134, 1984
Bst2BI CACGAG 3 cut(s) 1752, 2511, 3596
Bst2UI CCWGG 5 cut(s) 269, 860, 1042, 2085, 2348
Bst6I CTCTTC 5 cut(s) 33, 1483, 1645, 1897, 2377
BstACI GRCGYC 1 cut(s) 99
BstAFI CTTAAG 1 cut(s) 1864
BstAPI GCANNNNNTGC 4 cut(s) 1931, 2290, 2861, 3446
BstAUI TGTACA 2 cut(s) 2735, 2955
BstBI TTCGAA 1 cut(s) 1486
BstDSI CCRYGG 1 cut(s) 1984
BstENI CCTNNNNNAGG 1 cut(s) 1316
BstF5I GGATG 8 cut(s) 928, 1192, 1828, 2239, 2266, 2336, 2449, 2602
BstFNI CGCG 5 cut(s) 186, 1169, 2112, 2504, 2706
BstH2I RGCGCY 4 cut(s) 102, 1048, 1472, 3626
BstMAI GTCTC 7 cut(s) 193, 465, 1681, 1786, 2230, 2493, 3599
BstNI CCWGG 5 cut(s) 269, 860, 1042, 2085, 2348
BstNSI RCATGY 5 cut(s) 757, 1981, 2069, 2605, 3253
BstSCI CCNGG 5 cut(s) 267, 858, 1040, 2083, 2346
BstSFI CTRYAG 7 cut(s) 711, 1527, 1728, 2310, 2898, 2942, 3271
BstUI CGCG 5 cut(s) 186, 1169, 2112, 2504, 2706
BstV2I GAAGAC 4 cut(s) 90, 3213, 3314, 3612
BstX2I RGATCY 2 cut(s) 213, 1508
BstXI CCANNNNNNTGG 1 cut(s) 2347
BstYI RGATCY 2 cut(s) 213, 1508
BsuI GTATCC 1 cut(s) 3069
BsuRI GGCC 6 cut(s) 410, 533, 764, 1622, 2724, 3497
BtgI CCRYGG 1 cut(s) 1984
BtrI CACGTC 2 cut(s) 746, 1298
BtsCI GGATG 8 cut(s) 928, 1192, 1828, 2239, 2266, 2336, 2449, 2602
BtsI GCAGTG 3 cut(s) 72, 117, 1725
BveI ACCTGC 1 cut(s) 3653
CaiI CAGNNNCTG 2 cut(s) 3476, 3776
CciI TCATGA 1 cut(s) 822
Cfr13I GGNCC 5 cut(s) 698, 1324, 1493, 2701, 3495
CseI GACGC 2 cut(s) 175, 2510
CsiI ACCWGGT 1 cut(s) 2083
CspCI CAANNNNNGTGG 2 cut(s) 862, 897
DinI GGCGCC 1 cut(s) 100
DraI TTTAAA 1 cut(s) 1143
DraIII CACNNNGTG 2 cut(s) 1502, 2290
Eam1104I CTCTTC 5 cut(s) 33, 1483, 1645, 1897, 2377
EarI CTCTTC 5 cut(s) 33, 1483, 1645, 1897, 2377
EciI GGCGGA 1 cut(s) 901
Eco130I CCWWGG 3 cut(s) 102, 1134, 1984
Eco147I AGGCCT 1 cut(s) 764
Eco24I GRGCYC 1 cut(s) 2817
Eco31I GGTCTC 1 cut(s) 3599
Eco32I GATATC 3 cut(s) 586, 672, 1805
Eco47I GGWCC 4 cut(s) 698, 1324, 1493, 2701
Eco47III AGCGCT 1 cut(s) 3624
Eco57I CTGAAG 8 cut(s) 116, 474, 2300, 2474, 3065, 3453, 3624, 3684
EcoNI CCTNNNNNAGG 1 cut(s) 1316
EcoO109I RGGNCCY 1 cut(s) 1324
EcoRII CCWGG 5 cut(s) 267, 858, 1040, 2083, 2346
EcoRV GATATC 3 cut(s) 586, 672, 1805
EcoT14I CCWWGG 3 cut(s) 102, 1134, 1984
EcoT22I ATGCAT 2 cut(s) 371, 3790
EcoT38I GRGCYC 1 cut(s) 2817
EgeI GGCGCC 1 cut(s) 100
EheI GGCGCC 1 cut(s) 100
ErhI CCWWGG 3 cut(s) 102, 1134, 1984
Esp3I CGTCTC 2 cut(s) 193, 2493
FalI AAGNNNNNCTT 8 cut(s) 143, 175, 1147, 1179, 2088, 2120, 3555, 3587
FaqI GGGAC 1 cut(s) 2567
FauI CCCGC 4 cut(s) 392, 435, 2105, 2156
FbaI TGATCA 1 cut(s) 939
FblI GTMKAC 2 cut(s) 3242, 3807
FokI GGATG 8 cut(s) 935, 1199, 1835, 2226, 2273, 2323, 2456, 2609
FriOI GRGCYC 1 cut(s) 2817
FspAI RTGCGCAY 1 cut(s) 707
FspBI CTAG 5 cut(s) 603, 948, 2328, 3521, 3735
FspI TGCGCA 1 cut(s) 707
GsaI CCCAGC 2 cut(s) 1073, 3652
GsuI CTGGAG 4 cut(s) 290, 2025, 2598, 2831
HaeII RGCGCY 4 cut(s) 102, 1048, 1472, 3626
HaeIII GGCC 6 cut(s) 410, 533, 764, 1622, 2724, 3497
HgaI GACGC 2 cut(s) 175, 2510
Hin1I GRCGYC 1 cut(s) 99
HincII GTYRAC 2 cut(s) 2358, 3808
HindII GTYRAC 2 cut(s) 2358, 3808
HindIII AAGCTT 3 cut(s) 734, 2456, 3549
HphI GGTGA 6 cut(s) 83, 1026, 1376, 2696, 2822, 3668
Hpy166II GTNNAC 8 cut(s) 632, 1034, 1496, 1723, 2358, 3243, 3568, 3808
Hpy8I GTNNAC 8 cut(s) 632, 1034, 1496, 1723, 2358, 3243, 3568, 3808
Hpy99I CGWCG 3 cut(s) 92, 416, 2978
HpyCH4IV ACGT 4 cut(s) 745, 1258, 1297, 2973
HpySE526I ACGT 4 cut(s) 745, 1258, 1297, 2973
Hsp92I GRCGYC 1 cut(s) 99
KasI GGCGCC 1 cut(s) 98
KpnI GGTACC 1 cut(s) 3047
Ksp22I TGATCA 1 cut(s) 939
LguI GCTCTTC 1 cut(s) 1645
LmnI GCTCC 9 cut(s) 120, 208, 649, 845, 1342, 1988, 2569, 2812, 3681
LweI GCATC 9 cut(s) 378, 439, 1103, 1111, 1513, 2251, 2842, 3170, 3797
MabI ACCWGGT 1 cut(s) 2083
MaeI CTAG 5 cut(s) 603, 948, 2328, 3521, 3735
MaeII ACGT 4 cut(s) 745, 1258, 1297, 2973
MbiI CCGCTC 1 cut(s) 306
MfeI CAATTG 2 cut(s) 2475, 3074
MflI RGATCY 2 cut(s) 213, 1508
MhlI GDGCHC 2 cut(s) 117, 2817
Mly113I GGCGCC 1 cut(s) 99
MlyI GAGTC 7 cut(s) 50, 56, 973, 2589, 3297, 3364, 3803
MmeI TCCRAC 5 cut(s) 24, 1486, 2299, 2982, 3703
Mph1103I ATGCAT 2 cut(s) 371, 3790
MroXI GAANNNNTTC 2 cut(s) 2794, 3012
MslI CAYNNNNRTG 1 cut(s) 2031
MspA1I CMGCKG 5 cut(s) 649, 1307, 2051, 2141, 2930
MspCI CTTAAG 1 cut(s) 1864
MspR9I CCNGG 5 cut(s) 269, 860, 1042, 2085, 2348
MunI CAATTG 2 cut(s) 2475, 3074
Mva1269I GAATGC 2 cut(s) 1118, 2572
MvaI CCWGG 5 cut(s) 269, 860, 1042, 2085, 2348
MvnI CGCG 5 cut(s) 186, 1169, 2112, 2504, 2706
NarI GGCGCC 1 cut(s) 99
NcoI CCATGG 1 cut(s) 1984
NlaIV GGNNCC 6 cut(s) 100, 576, 909, 2702, 2814, 3045
NmeAIII GCCGAG 1 cut(s) 1906
NmuCI GTSAC 4 cut(s) 388, 1847, 3281, 3772
NsbI TGCGCA 1 cut(s) 707
NsiI ATGCAT 2 cut(s) 371, 3790
NspI RCATGY 5 cut(s) 757, 1981, 2069, 2605, 3253
NspV TTCGAA 1 cut(s) 1486
PaeI GCATGC 1 cut(s) 1981
PagI TCATGA 1 cut(s) 822
PceI AGGCCT 1 cut(s) 764
PciI ACATGT 2 cut(s) 2065, 2601
PciSI GCTCTTC 1 cut(s) 1645
PctI GAATGC 2 cut(s) 1118, 2572
PdmI GAANNNNTTC 2 cut(s) 2794, 3012
PfeI GAWTC 9 cut(s) 343, 826, 2254, 2795, 3146, 3319, 3389, 3479, 3724
PflFI GACNNNGTC 1 cut(s) 3287
PflMI CCANNNNNTGG 1 cut(s) 2436
PleI GAGTC 7 cut(s) 49, 55, 972, 2588, 3296, 3363, 3803
PluTI GGCGCC 1 cut(s) 102
PpsI GAGTC 7 cut(s) 49, 55, 972, 2588, 3296, 3363, 3803
PpuMI RGGWCCY 1 cut(s) 1324
PscI ACATGT 2 cut(s) 2065, 2601
Psp5II RGGWCCY 1 cut(s) 1324
Psp6I CCWGG 5 cut(s) 267, 858, 1040, 2083, 2346
PspFI CCCAGC 2 cut(s) 1069, 3648
PspGI CCWGG 5 cut(s) 267, 858, 1040, 2083, 2346
PspN4I GGNNCC 6 cut(s) 100, 576, 909, 2702, 2814, 3045
PspPI GGNCC 5 cut(s) 698, 1324, 1493, 2701, 3495
PspPPI RGGWCCY 1 cut(s) 1324
PstI CTGCAG 3 cut(s) 1531, 1732, 2314
PstNI CAGNNNCTG 2 cut(s) 3476, 3776
PsuI RGATCY 2 cut(s) 213, 1508
PsyI GACNNNGTC 1 cut(s) 3287
PvuII CAGCTG 3 cut(s) 1307, 2141, 2930
RseI CAYNNNNRTG 1 cut(s) 2031
SalI GTCGAC 1 cut(s) 3806
SapI GCTCTTC 1 cut(s) 1645
Sau96I GGNCC 5 cut(s) 698, 1324, 1493, 2701, 3495
ScaI AGTACT 1 cut(s) 125
SchI GAGTC 7 cut(s) 50, 56, 973, 2589, 3297, 3364, 3803
ScrFI CCNGG 5 cut(s) 269, 860, 1042, 2085, 2348
SduI GDGCHC 2 cut(s) 117, 2817
SexAI ACCWGGT 1 cut(s) 2083
SfaNI GCATC 9 cut(s) 378, 439, 1103, 1111, 1513, 2251, 2842, 3170, 3797
SfcI CTRYAG 7 cut(s) 711, 1527, 1728, 2310, 2898, 2942, 3271
SfoI GGCGCC 1 cut(s) 100
SfuI TTCGAA 1 cut(s) 1486
SinI GGWCC 4 cut(s) 698, 1324, 1493, 2701
SmiI ATTTAAAT 1 cut(s) 1143
SmiMI CAYNNNNRTG 1 cut(s) 2031
SmlI CTYRAG 4 cut(s) 1864, 2233, 2726, 3811
SmoI CTYRAG 4 cut(s) 1864, 2233, 2726, 3811
SpeI ACTAGT 1 cut(s) 3734
SphI GCATGC 1 cut(s) 1981
SseBI AGGCCT 1 cut(s) 764
SspDI GGCGCC 1 cut(s) 98
SspI AATATT 1 cut(s) 1919
SspMI CTAG 5 cut(s) 603, 948, 2328, 3521, 3735
StuI AGGCCT 1 cut(s) 764
StyD4I CCNGG 5 cut(s) 267, 858, 1040, 2083, 2346
StyI CCWWGG 3 cut(s) 102, 1134, 1984
SwaI ATTTAAAT 1 cut(s) 1143
TaiI ACGT 4 cut(s) 748, 1261, 1300, 2976
TaqI TCGA 7 cut(s) 258, 1486, 2592, 2976, 3264, 3687, 3807
TatI WGTACW 5 cut(s) 123, 515, 1955, 2735, 2955
TauI GCSGC 1 cut(s) 508
TfiI GAWTC 9 cut(s) 343, 826, 2254, 2795, 3146, 3319, 3389, 3479, 3724
TseFI GTSAC 4 cut(s) 388, 1847, 3281, 3772
Tsp45I GTSAC 4 cut(s) 388, 1847, 3281, 3772
TspGWI ACGGA 4 cut(s) 567, 1259, 3503, 3559
Tth111I GACNNNGTC 1 cut(s) 3287
Van91I CCANNNNNTGG 1 cut(s) 2436
Vha464I CTTAAG 1 cut(s) 1864
VpaK11BI GGWCC 4 cut(s) 698, 1324, 1493, 2701
XagI CCTNNNNNAGG 1 cut(s) 1316
XapI RAATTY 3 cut(s) 1144, 1842, 2949
XceI RCATGY 5 cut(s) 757, 1981, 2069, 2605, 3253
XmiI GTMKAC 2 cut(s) 3242, 3807
XmnI GAANNNNTTC 2 cut(s) 2794, 3012
XspI CTAG 5 cut(s) 603, 948, 2328, 3521, 3735
ZrmI AGTACT 1 cut(s) 125
Zsp2I ATGCAT 2 cut(s) 371, 3790
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.