FvH4_7g07990

LisH domain and HEAT repeat-containing protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
7909747 .. 7921356
11610 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g07990.t5

Sequence Viewer

Length: 3579 bp
ATGATGGACGTGGAGAAGTCGTCGCTGTGCAATTGCGTGGTTAACTTTCTTCTGGAGGAGAACTACTTACTTACAGCATTCGAGCTTCTCCACGAGCTTCTTGACGATGGCAGAGACGATCAGGCCATTCGTCTCAAGAACTTCTTCTCTGATTCCTCCCAGTTCCCTCCCGATCAGATCTCTCGCTTCAACACTCTCAGAGTTGCAGATCCTCAAACTTTGCTTCAGGAGAAAGAAGCGGTAGAAGAAAAATTAGCAATTACTGAATATGAGCTCCGTTTGGCCCAAGAGGACATTTCGAAATTCAAGACTGAATTGCAGAAGCAAGCAGAATCACCTGTAACTGAACTGAGGGATTCAGAGTCAAATGCCAGTGTAAATAATGGACCCCAATTTCACCGGCAAAAGACAGATGTCTCCTTCTCGGATTTGGGTCCCTTGAAAGACAATGAACGTCAAGATCTGAACTGCGCTGTAAAGGAATATTTGCTAATAGCAGGTTACCGTCTTACTGCAATGACATTTTTTGAAGAGAATACTCATTTGGACGAGGGCTCCCAAGACTCTTTTTTTCTCAGACTTCATTGGATTATTATTGTCACAGATCAGAATCTAGATGTTTGGCAGAACTCACCCGCATGTGTACCAGATGCCCTGCGCCATTATTATTATCAGTATCTTTCATCCACTACAGAAGCTGCTGAGGAGAAAATTTCCATGCTTCGGAAAAATGAGTCGTTGTTGGAGGAAAATGAGAAGCTCAATCATGAAAAGATGTGTTTGGTTAAAAACAAAGATATGGCTGAAGGACAAATAAGTGCACTCAACAAATCATTGGAATCTCTTCAGAAGGACCTTAAAGACAAAGAGAACCTTGTACAAGATTTAAGGCAGTCCCTGGAGCACCAAAGGAAGGAGCTCAATGGTTGTAGAGCTGAAGTCACTGCTTTGAAAATGCACATTGAAGGATCTGGTTCGGGACAAAATATGGTAGCCACTGATGTTGATCAATCCCTGTCATTGGAAAAATACAAAGATGAAGTCAAATCACTGCAGATGGAACTAGAAATTTTAAGATCCAAAATCGCAAATGTAGATTCCACCCAAGCTGGGAAAGAGTCCATGCAGATGGAAGAAAAGGTTCTAGTCATGGATGAGGAGAAAAGTATAATCCAGCATCCAGATGATGCAATAACAAAAGTTGTGAAAGAAGCTGATCATTCAATAGCAGATGACAACCTAATTACACCTAAGGATGTCTCGGAAGAATATTCAGTAGATCCTTCGAATGGTAGTGGTGCCTTGACAAATGGTGGAAGTGTTTGCAAACAAAAGGATGTCTCGGAACCATCTACATCTAGCATGTTGCATCCAACAACAGAGGATCATAGTGCTGAAATTATTTCAGAGAAAAGGGGTCTAGAGACCATTCAGATCCTTGCTGATGCCTTACCCAAGATTGTTCCTTATGTTCTAATCAACCACCGCGAGGAGCTACTTCCTCTGATCATGTGTGCTATTGAGCGCCATCCAGAGAGCAGTACTCGAGATTCCTTGACCCACACATTGTTTAATTTAATCAAACGTCCAGATGAGCAGCAAAGAAGAATTATAATGGATGCCTGTGTCAGCCTTGCTCAGAATGTAGGAGACATGAGAACAGAAACAGAATTGCTTCCTCAGTGTTGGGAGCAAATAAATCATACATATGAGGAGCGCAGGTTGCTGGTTGCTCAATCATGTGGAGAGCTAGGAGAGTTTGTTCGGCCTGAGATCCGTGATTCTCTTATCTTGTCTATTGTTCAACAACTCATAGAAGATTCTGCAACTGTTGTCCGGGAGGCTGCTGTACATAATCTTGCATTGCTGCTTCCACTCTTTCCAAATATGGACAAATATTTCAAGGTTGAAGAATTGATGTTCCAATTGGTCTGTGATCCCTCTGGAGTGGTGGTGGAAACTACACTCAAAGAATTAGTCCCTGCGGTAATCAAGTGGGGACAGAAATTAGACCATGTTTTAAGGGTTCTCCTCTCTTATATATTGAGCTCTGCTGAGCGCTGCCCTCCGCTTTCAGGGGTTGAAGGGTCTGTGGAGTCACATCTTCGTGTGTTAGGAGAACGAGAACGCTGGAATGTCGATGTTTTATTAAGAATGCTACTGGAAATGCTTCCCTCTGTGCACCAGAAAGCAATTGAGATGTCCCCATTTTCTTCTGATCCTGAAACAACTGGAACAATATTTTCTACACCTTTCCTTGAATTGTATGCTGGGGGACATGTTCAGTTGCCTGCTTTTGAGTGGTTGCATGTTGACTGCTTACCCGACTTAATACAGCTTGCCTGCTTTCTACCTCCAAAAGAAGATACTTTGCGAAATCGAATCACCAGGTTTTTGTTGGCTGTATCTGAACACTACGGGGATTCTTATTTGACACATATAATGCTGCCTGTATTCCTTATAGCCATTGGGGAAGATGCTCAATTGACATATTTCCCATCTTCAAGCCATTCCAAAATTGAAGGTTTGGCACCAAGGACTGCTGTGGCTAAGAGACTGGCTACTATGTGCATCCTACCTCTTTTCTTGGCTGGAGTTTTGGGTGCCCCAAGCAAGCACGAGCAATTAGTGGAGTACTTGAGAAAGCTATTAGTTGAAGGTGCGGGAAATCAGTCGACAAAGTGCAATACTGAGATTGTTGATGCTGTCCGCTTCCTGTGCACATTTGAAATTCATCATGGGATGATATTCAATATACTCTGGGAAATGGTTGTCAGCTCCAACATAGATATGAAAATCAATGCTGCCAATCTGTTGAAAGTTATTGTTCCATATATCGATGCAAAAGTTGCATCTACTAATATATTGCCTGCCCTAGTAACTCTGGGCTCCGACCAAAACCTGAGTGTGAAGTATGCTAGCATAGTCGCCTTTGGAGCTGTCGCCCAACATTTTAAAAATGATATGATTGTCGATAAGATACGAGTTCAGATGGATGCTTTTCTTGAAGATGGATCCCATGAAGCTACCATTGCTGTAGTTCATGCATTAGTAGTTGCTGTGCCTCATACAACAGATAGACTTAAAGATTATCTTTTATCCAAGATCTTTCACCTTACAGGCACTCTGCCTGCTAGTGACATGATGCGACGTCGTGAGAGAGCAAATGCATTTTGTGAAGCAATCCGTGCTTTAGATGCAACAGATATTTCAGCAACCAGTGTACGAGACTACCTCCTACCGACCATCCAGAACCTATTGAAAGACTCAGATGCACTGGATCCAGTACACAAGGAAGCCCTTGAAATTATAATGAAGGAGAGATCTGGTGGAACTTTTGAGACCATCAGTAAGGTGATGGGTGCTGGACTCGCCTCCTCTGTGAGTAGTTTCTTTGGTGAAAGTGGGTTATTGGGAAAGAAAGATAATGTTGAGCCACTGCCAGAGCCAGTTGAATCCCCGAAGTCTGCACCAACGCCACCAGCAGAGGACACTAGATTAAGGCGCATTATGAGGGGTAATTTCACTGACATGCTCAGAGGCAAAGTAAAGGGCCAAGACGAAACTCAGAACCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1193

Amino Acids

133.8

Weight (kDa)

5.04

Isoelectric Point (pI)

47.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1613, 3311
AatII GACGTC 1 cut(s) 3154
Acc36I ACCTGC 2 cut(s) 488, 1710
AccB1I GGYRCC 3 cut(s) 1298, 2530, 2603
AccI GTMKAC 1 cut(s) 2675
AccII CGCG 1 cut(s) 1488
AciI CCGC 7 cut(s) 239, 636, 1486, 1985, 2069, 2663, 2710
AcsI RAATTY 4 cut(s) 302, 711, 1068, 2730
AcuI CTGAAG 4 cut(s) 209, 825, 830, 957
AcyI GRCGYC 1 cut(s) 3151
AfaI GTAC 7 cut(s) 645, 879, 1543, 1851, 2636, 3225, 3288
AfeI AGCGCT 1 cut(s) 2060
AfiI CCNNNNNNNGG 7 cut(s) 723, 913, 1021, 1110, 1289, 1489, 2075
AflIII ACRYGT 1 cut(s) 2278
AjiI CACGTC 1 cut(s) 10
AjnI CCWGG 2 cut(s) 897, 2387
AjuI GAANNNNNNNTTGG 2 cut(s) 527, 559
AloI GAACNNNNNNTCC 2 cut(s) 1746, 1778
Alw21I GWGCWC 7 cut(s) 276, 823, 906, 921, 2051, 2184, 2723
Alw44I GTGCAC 3 cut(s) 819, 2180, 2719
AlwNI CAGNNNCTG 2 cut(s) 698, 898
Ama87I CYCGRG 1 cut(s) 1545
Aor51HI AGCGCT 1 cut(s) 2060
AoxI GGCC 4 cut(s) 123, 282, 1766, 3553
ApaLI GTGCAC 3 cut(s) 819, 2180, 2719
ApeKI GCWGC 7 cut(s) 698, 1597, 1844, 1867, 2061, 2446, 2804
ApoI RAATTY 4 cut(s) 302, 711, 1068, 2730
ArsI GACNNNNNNTTYG 4 cut(s) 1026, 1058, 1962, 1994
Asp700I GAANNNNTTC 5 cut(s) 143, 843, 1140, 1674, 2169
AspLEI GCGC 6 cut(s) 473, 660, 1527, 1719, 2061, 3507
AspS9I GGNCC 5 cut(s) 283, 386, 434, 853, 3553
AsuC2I CCSGG 1 cut(s) 1838
AsuHPI GGTGA 7 cut(s) 327, 389, 624, 2377, 3104, 3367, 3410
AsuII TTCGAA 2 cut(s) 299, 1286
AsuNHI GCTAGC 1 cut(s) 2918
AvaI CYCGRG 1 cut(s) 1545
AvaII GGWCC 3 cut(s) 386, 434, 853
AxyI CCTNAGG 1 cut(s) 1251
BaeGI GKGCMC 4 cut(s) 823, 2184, 2608, 2723
BamHI GGATCC 2 cut(s) 3014, 3280
BanI GGYRCC 3 cut(s) 1298, 2530, 2603
BanII GRGCYC 5 cut(s) 276, 557, 921, 2051, 2891
BauI CACGAG 2 cut(s) 92, 2618
Bbv12I GWGCWC 7 cut(s) 276, 823, 906, 921, 2051, 2184, 2723
BbvCI CCTCAGC 1 cut(s) 702
BbvI GCAGC 7 cut(s) 685, 1609, 1831, 1854, 2048, 2433, 2791
BciT130I CCWGG 2 cut(s) 899, 2389
BclI TGATCA 3 cut(s) 1006, 1216, 1506
BcnI CCSGG 1 cut(s) 1838
BfmI CTRYAG 3 cut(s) 690, 1052, 3036
BfoI RGCGCY 2 cut(s) 1528, 2062
BfuAI ACCTGC 2 cut(s) 488, 1710
BglII AGATCT 4 cut(s) 177, 460, 3105, 3323
BisI GCNGC 7 cut(s) 699, 1598, 1845, 1868, 2062, 2447, 2805
BlpI GCTNAGC 1 cut(s) 2055
BlsI GCNGC 7 cut(s) 700, 1599, 1846, 1869, 2063, 2448, 2806
BmcAI AGTACT 2 cut(s) 1543, 2636
Bme1390I CCNGG 3 cut(s) 899, 1838, 2389
Bme18I GGWCC 3 cut(s) 386, 434, 853
BmeT110I CYCGRG 1 cut(s) 1545
BmgBI CACGTC 1 cut(s) 10
BmgT120I GGNCC 5 cut(s) 283, 386, 434, 853, 3553
BmrFI CCNGG 3 cut(s) 899, 1838, 2389
BmrI ACTGGG 1 cut(s) 154
BmtI GCTAGC 1 cut(s) 2922
BmuI ACTGGG 1 cut(s) 154
BoxI GACNNNNGTC 1 cut(s) 413
BplI GAGNNNNNCTC 4 cut(s) 1528, 1560, 3219, 3251
BpmI CTGGAG 4 cut(s) 74, 920, 1965, 2613
Bpu10I CCTNAGC 1 cut(s) 702
Bpu1102I GCTNAGC 1 cut(s) 2055
Bpu14I TTCGAA 2 cut(s) 299, 1286
BpuEI CTTGAG 2 cut(s) 119, 2659
BpuMI CCSGG 1 cut(s) 1838
Bsa29I ATCGAT 1 cut(s) 2838
BsaBI GATNNNNATC 2 cut(s) 609, 1005
BsaHI GRCGYC 1 cut(s) 3151
BsaI GGTCTC 2 cut(s) 1418, 3335
BsaJI CCNNGG 2 cut(s) 897, 2534
Bsc4I CCNNNNNNNGG 7 cut(s) 723, 913, 1021, 1110, 1289, 1489, 2075
Bse118I RCCGGY 1 cut(s) 399
Bse1I ACTGG 9 cut(s) 160, 372, 2166, 2236, 2562, 3219, 3282, 3284, 3449
Bse21I CCTNAGG 1 cut(s) 1251
Bse3DI GCAATG 3 cut(s) 522, 1862, 3030
Bse8I GATNNNNATC 2 cut(s) 609, 1005
BseBI CCWGG 2 cut(s) 899, 2389
BseCI ATCGAT 1 cut(s) 2838
BseDI CCNNGG 2 cut(s) 897, 2534
BseJI GATNNNNATC 2 cut(s) 609, 1005
BseLI CCNNNNNNNGG 7 cut(s) 723, 913, 1021, 1110, 1289, 1489, 2075
BseMI GCAATG 3 cut(s) 522, 1862, 3030
BseNI ACTGG 9 cut(s) 160, 372, 2166, 2236, 2562, 3219, 3282, 3284, 3449
BseRI GAGGAG 7 cut(s) 71, 719, 1172, 1505, 1727, 2021, 3367
BseSI GKGCMC 4 cut(s) 823, 2184, 2608, 2723
BseXI GCAGC 7 cut(s) 685, 1609, 1831, 1854, 2048, 2433, 2791
BseYI CCCAGC 2 cut(s) 1109, 2270
BsgI GTGCAG 1 cut(s) 3453
Bsh1236I CGCG 1 cut(s) 1488
BshFI GGCC 4 cut(s) 125, 284, 1768, 3555
BshNI GGYRCC 3 cut(s) 1298, 2530, 2603
BshVI ATCGAT 1 cut(s) 2838
BsiHKAI GWGCWC 7 cut(s) 276, 823, 906, 921, 2051, 2184, 2723
BsiHKCI CYCGRG 1 cut(s) 1545
BsiSI CCGG 2 cut(s) 400, 1837
BslFI GGGAC 7 cut(s) 420, 880, 993, 1964, 2013, 2188, 2289
BslI CCNNNNNNNGG 7 cut(s) 723, 913, 1021, 1110, 1289, 1489, 2075
BsmBI CGTCTC 2 cut(s) 108, 137
BsmFI GGGAC 7 cut(s) 420, 880, 993, 1964, 2013, 2188, 2289
BsmI GAATGC 2 cut(s) 77, 2160
BsnI GGCC 4 cut(s) 125, 284, 1768, 3555
Bso31I GGTCTC 2 cut(s) 1418, 3335
BsoBI CYCGRG 1 cut(s) 1545
Bsp119I TTCGAA 2 cut(s) 299, 1286
Bsp1407I TGTACA 2 cut(s) 877, 1849
Bsp1720I GCTNAGC 1 cut(s) 2055
BspACI CCGC 7 cut(s) 239, 636, 1486, 1985, 2069, 2663, 2710
BspANI GGCC 4 cut(s) 125, 284, 1768, 3555
BspDI ATCGAT 1 cut(s) 2838
BspFNI CGCG 1 cut(s) 1488
BspHI TCATGA 1 cut(s) 766
BspMAI CTGCAG 1 cut(s) 1056
BspMI ACCTGC 2 cut(s) 488, 1710
BspOI GCTAGC 1 cut(s) 2922
BspT104I TTCGAA 2 cut(s) 299, 1286
BspT107I GGYRCC 3 cut(s) 1298, 2530, 2603
BspTNI GGTCTC 2 cut(s) 1418, 3335
BsrDI GCAATG 3 cut(s) 522, 1862, 3030
BsrFI RCCGGY 1 cut(s) 399
BsrGI TGTACA 2 cut(s) 877, 1849
BsrI ACTGG 9 cut(s) 160, 372, 2166, 2236, 2562, 3219, 3282, 3284, 3449
BssAI RCCGGY 1 cut(s) 399
BssECI CCNNGG 2 cut(s) 897, 2534
BssNI GRCGYC 1 cut(s) 3151
BssSI CACGAG 2 cut(s) 92, 2618
BssT1I CCWWGG 1 cut(s) 2534
Bst2BI CACGAG 2 cut(s) 92, 2618
Bst2UI CCWGG 2 cut(s) 899, 2389
Bst4CI ACNGT 2 cut(s) 506, 1831
Bst6I CTCTTC 2 cut(s) 525, 849
BstACI GRCGYC 1 cut(s) 3151
BstAPI GCANNNNNTGC 2 cut(s) 2849, 3188
BstAUI TGTACA 2 cut(s) 877, 1849
BstBI TTCGAA 2 cut(s) 299, 1286
BstC8I GCNNGC 8 cut(s) 327, 2292, 2340, 2344, 2615, 2871, 2920, 3132
BstEII GGTNACC 1 cut(s) 500
BstFNI CGCG 1 cut(s) 1488
BstH2I RGCGCY 2 cut(s) 1528, 2062
BstHHI GCGC 6 cut(s) 473, 660, 1527, 1719, 2061, 3507
BstMWI GCNNNNNNNGC 8 cut(s) 1723, 2718, 2849, 2936, 3032, 3188, 3197, 3371
BstNI CCWGG 2 cut(s) 899, 2389
BstNSI RCATGY 5 cut(s) 642, 1366, 2282, 2312, 3535
BstPAI GACNNNNGTC 1 cut(s) 413
BstPI GGTNACC 1 cut(s) 500
BstSCI CCNGG 3 cut(s) 897, 1836, 2387
BstSFI CTRYAG 3 cut(s) 690, 1052, 3036
BstSLI GKGCMC 4 cut(s) 823, 2184, 2608, 2723
BstUI CGCG 1 cut(s) 1488
BstV1I GCAGC 7 cut(s) 685, 1609, 1831, 1854, 2048, 2433, 2791
BstXI CCANNNNNNTGG 1 cut(s) 1129
Bsu15I ATCGAT 1 cut(s) 2838
Bsu36I CCTNAGG 1 cut(s) 1251
BsuRI GGCC 4 cut(s) 125, 284, 1768, 3555
BsuTUI ATCGAT 1 cut(s) 2838
BtrI CACGTC 1 cut(s) 10
BtsI GCAGTG 3 cut(s) 942, 1049, 3437
BtsIMutI CAGTG 9 cut(s) 379, 942, 996, 1049, 1688, 3226, 3275, 3437, 3525
BveI ACCTGC 2 cut(s) 488, 1710
Cac8I GCNNGC 8 cut(s) 327, 2292, 2340, 2344, 2615, 2871, 2920, 3132
CaiI CAGNNNCTG 2 cut(s) 698, 898
CciI TCATGA 1 cut(s) 766
CfoI GCGC 6 cut(s) 473, 660, 1527, 1719, 2061, 3507
Cfr10I RCCGGY 1 cut(s) 399
Cfr13I GGNCC 5 cut(s) 283, 386, 434, 853, 3553
ClaI ATCGAT 1 cut(s) 2838
CsiI ACCWGGT 1 cut(s) 2387
Csp6I GTAC 7 cut(s) 644, 878, 1542, 1850, 2635, 3224, 3287
CspCI CAANNNNNGTGG 2 cut(s) 985, 1020
CviQI GTAC 7 cut(s) 644, 878, 1542, 1850, 2635, 3224, 3287
DraI TTTAAA 1 cut(s) 2956
Eam1104I CTCTTC 2 cut(s) 525, 849
EarI CTCTTC 2 cut(s) 525, 849
Ecl136II GAGCTC 3 cut(s) 274, 919, 2049
Eco130I CCWWGG 1 cut(s) 2534
Eco24I GRGCYC 5 cut(s) 276, 557, 921, 2051, 2891
Eco31I GGTCTC 2 cut(s) 1418, 3335
Eco47I GGWCC 3 cut(s) 386, 434, 853
Eco47III AGCGCT 1 cut(s) 2060
Eco53kI GAGCTC 3 cut(s) 274, 919, 2049
Eco57I CTGAAG 4 cut(s) 209, 825, 830, 957
Eco81I CCTNAGG 1 cut(s) 1251
Eco88I CYCGRG 1 cut(s) 1545
Eco91I GGTNACC 1 cut(s) 500
EcoICRI GAGCTC 3 cut(s) 274, 919, 2049
EcoO109I RGGNCCY 2 cut(s) 434, 853
EcoO65I GGTNACC 1 cut(s) 500
EcoRII CCWGG 2 cut(s) 897, 2387
EcoT14I CCWWGG 1 cut(s) 2534
EcoT22I ATGCAT 2 cut(s) 3049, 3172
EcoT38I GRGCYC 5 cut(s) 276, 557, 921, 2051, 2891
ErhI CCWWGG 1 cut(s) 2534
Esp3I CGTCTC 2 cut(s) 108, 137
FalI AAGNNNNNCTT 6 cut(s) 128, 160, 858, 890, 3078, 3110
FaqI GGGAC 7 cut(s) 420, 880, 993, 1964, 2013, 2188, 2289
FauI CCCGC 2 cut(s) 643, 2656
FauNDI CATATG 1 cut(s) 1708
FbaI TGATCA 3 cut(s) 1006, 1216, 1506
FblI GTMKAC 1 cut(s) 2675
Fnu4HI GCNGC 7 cut(s) 699, 1598, 1845, 1868, 2062, 2447, 2805
FriOI GRGCYC 5 cut(s) 276, 557, 921, 2051, 2891
Fsp4HI GCNGC 7 cut(s) 699, 1598, 1845, 1868, 2062, 2447, 2805
GlaI GCGC 6 cut(s) 472, 659, 1526, 1718, 2060, 3506
GluI GCNGC 7 cut(s) 699, 1598, 1845, 1868, 2062, 2447, 2805
GsaI CCCAGC 2 cut(s) 1113, 2274
GsuI CTGGAG 4 cut(s) 74, 920, 1965, 2613
HaeII RGCGCY 2 cut(s) 1528, 2062
HaeIII GGCC 4 cut(s) 125, 284, 1768, 3555
HapII CCGG 2 cut(s) 400, 1837
HhaI GCGC 6 cut(s) 473, 660, 1527, 1719, 2061, 3507
Hin1I GRCGYC 1 cut(s) 3151
Hin6I GCGC 6 cut(s) 471, 658, 1525, 1717, 2059, 3505
HinP1I GCGC 6 cut(s) 471, 658, 1525, 1717, 2059, 3505
HincII GTYRAC 3 cut(s) 43, 2314, 2676
HindII GTYRAC 3 cut(s) 43, 2314, 2676
HpaI GTTAAC 1 cut(s) 43
HpaII CCGG 2 cut(s) 400, 1837
HphI GGTGA 7 cut(s) 327, 389, 624, 2377, 3104, 3367, 3410
Hpy166II GTNNAC 9 cut(s) 43, 644, 821, 2182, 2314, 2676, 2721, 3224, 3289
Hpy8I GTNNAC 9 cut(s) 43, 644, 821, 2182, 2314, 2676, 2721, 3224, 3289
Hpy99I CGWCG 3 cut(s) 25, 3153, 3156
HpyCH4III ACNGT 2 cut(s) 506, 1831
HpyCH4IV ACGT 4 cut(s) 9, 454, 1585, 3151
HpyF10VI GCNNNNNNNGC 8 cut(s) 1723, 2718, 2849, 2936, 3032, 3188, 3197, 3371
HpySE526I ACGT 4 cut(s) 9, 454, 1585, 3151
Hsp92I GRCGYC 1 cut(s) 3151
HspAI GCGC 6 cut(s) 471, 658, 1525, 1717, 2059, 3505
KflI GGGWCCC 1 cut(s) 434
Ksp22I TGATCA 3 cut(s) 1006, 1216, 1506
KspAI GTTAAC 1 cut(s) 43
Lsp1109I GCAGC 7 cut(s) 685, 1609, 1831, 1854, 2048, 2433, 2791
MabI ACCWGGT 1 cut(s) 2387
MaeII ACGT 4 cut(s) 9, 454, 1585, 3151
MaeIII GTNAC 7 cut(s) 340, 500, 598, 940, 2097, 2878, 3137
MfeI CAATTG 4 cut(s) 31, 1925, 2193, 2483
MlyI GAGTC 7 cut(s) 371, 557, 743, 1127, 2105, 3260, 3363
MmeI TCCRAC 4 cut(s) 723, 1397, 2805, 2916
Mph1103I ATGCAT 2 cut(s) 3049, 3172
MroXI GAANNNNTTC 5 cut(s) 143, 843, 1140, 1674, 2169
MslI CAYNNNNRTG 7 cut(s) 637, 1127, 1182, 1707, 2106, 2789, 3530
MspI CCGG 2 cut(s) 400, 1837
MspR9I CCNGG 3 cut(s) 899, 1838, 2389
MunI CAATTG 4 cut(s) 31, 1925, 2193, 2483
Mva1269I GAATGC 2 cut(s) 77, 2160
MvaI CCWGG 2 cut(s) 899, 2389
MvnI CGCG 1 cut(s) 1488
MwoI GCNNNNNNNGC 8 cut(s) 1723, 2718, 2849, 2936, 3032, 3188, 3197, 3371
NciI CCSGG 1 cut(s) 1838
NdeI CATATG 1 cut(s) 1708
NheI GCTAGC 1 cut(s) 2918
NmuCI GTSAC 4 cut(s) 598, 940, 2097, 3137
NsiI ATGCAT 2 cut(s) 3049, 3172
NspI RCATGY 5 cut(s) 642, 1366, 2282, 2312, 3535
NspV TTCGAA 2 cut(s) 299, 1286
PaeR7I CTCGAG 1 cut(s) 1545
PagI TCATGA 1 cut(s) 766
PciI ACATGT 1 cut(s) 2278
PctI GAATGC 2 cut(s) 77, 2160
PdmI GAANNNNTTC 5 cut(s) 143, 843, 1140, 1674, 2169
PfoI TCCNGGA 1 cut(s) 1836
PkrI GCNGC 7 cut(s) 700, 1599, 1846, 1869, 2063, 2448, 2806
PleI GAGTC 7 cut(s) 370, 557, 742, 1126, 2104, 3260, 3363
PpsI GAGTC 7 cut(s) 370, 557, 742, 1126, 2104, 3260, 3363
PpuMI RGGWCCY 2 cut(s) 434, 853
PscI ACATGT 1 cut(s) 2278
PshAI GACNNNNGTC 1 cut(s) 413
PsiI TTATAA 2 cut(s) 1613, 3311
Psp124BI GAGCTC 3 cut(s) 276, 921, 2051
Psp5II RGGWCCY 2 cut(s) 434, 853
Psp6I CCWGG 2 cut(s) 897, 2387
PspEI GGTNACC 1 cut(s) 500
PspFI CCCAGC 2 cut(s) 1109, 2270
PspGI CCWGG 2 cut(s) 897, 2387
PspPI GGNCC 5 cut(s) 283, 386, 434, 853, 3553
PspPPI RGGWCCY 2 cut(s) 434, 853
PstI CTGCAG 1 cut(s) 1056
PstNI CAGNNNCTG 2 cut(s) 698, 898
RsaI GTAC 7 cut(s) 645, 879, 1543, 1851, 2636, 3225, 3288
RsaNI GTAC 7 cut(s) 644, 878, 1542, 1850, 2635, 3224, 3287
RseI CAYNNNNRTG 7 cut(s) 637, 1127, 1182, 1707, 2106, 2789, 3530
SacI GAGCTC 3 cut(s) 276, 921, 2051
SalI GTCGAC 1 cut(s) 2674
SatI GCNGC 7 cut(s) 699, 1598, 1845, 1868, 2062, 2447, 2805
Sau96I GGNCC 5 cut(s) 283, 386, 434, 853, 3553
ScaI AGTACT 2 cut(s) 1543, 2636
SchI GAGTC 7 cut(s) 371, 557, 743, 1127, 2105, 3260, 3363
ScrFI CCNGG 3 cut(s) 899, 1838, 2389
SexAI ACCWGGT 1 cut(s) 2387
SfcI CTRYAG 3 cut(s) 690, 1052, 3036
Sfr274I CTCGAG 1 cut(s) 1545
SfuI TTCGAA 2 cut(s) 299, 1286
SinI GGWCC 3 cut(s) 386, 434, 853
SlaI CTCGAG 1 cut(s) 1545
SmiMI CAYNNNNRTG 7 cut(s) 637, 1127, 1182, 1707, 2106, 2789, 3530
SmlI CTYRAG 3 cut(s) 134, 1545, 2638
SmoI CTYRAG 3 cut(s) 134, 1545, 2638
SsiI CCGC 7 cut(s) 239, 636, 1486, 1985, 2069, 2663, 2710
SspI AATATT 4 cut(s) 485, 1271, 1898, 2241
SstI GAGCTC 3 cut(s) 276, 921, 2051
StyD4I CCNGG 3 cut(s) 897, 1836, 2387
StyI CCWWGG 1 cut(s) 2534
TaaI ACNGT 2 cut(s) 506, 1831
TaiI ACGT 4 cut(s) 12, 457, 1588, 3154
TaqI TCGA 9 cut(s) 81, 299, 1286, 1546, 2139, 2380, 2675, 2838, 2973
TatI WGTACW 5 cut(s) 877, 1541, 1849, 2634, 3286
TscAI CASTG 9 cut(s) 379, 949, 1003, 1056, 1688, 3226, 3282, 3444, 3532
TseFI GTSAC 4 cut(s) 598, 940, 2097, 3137
TseI GCWGC 7 cut(s) 698, 1597, 1844, 1867, 2061, 2446, 2804
Tsp45I GTSAC 4 cut(s) 598, 940, 2097, 3137
TspGWI ACGGA 3 cut(s) 266, 1766, 3176
TspRI CASTG 9 cut(s) 379, 949, 1003, 1056, 1688, 3226, 3282, 3444, 3532
VneI GTGCAC 3 cut(s) 819, 2180, 2719
VpaK11BI GGWCC 3 cut(s) 386, 434, 853
XapI RAATTY 4 cut(s) 302, 711, 1068, 2730
XbaI TCTAGA 2 cut(s) 613, 1420
XceI RCATGY 5 cut(s) 642, 1366, 2282, 2312, 3535
XcmI CCANNNNNNNNNTGG 1 cut(s) 2395
XhoI CTCGAG 1 cut(s) 1545
XmiI GTMKAC 1 cut(s) 2675
XmnI GAANNNNTTC 5 cut(s) 143, 843, 1140, 1674, 2169
ZraI GACGTC 1 cut(s) 3152
ZrmI AGTACT 2 cut(s) 1543, 2636
Zsp2I ATGCAT 2 cut(s) 3049, 3172
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.