MD09G1255900.v1.1

LisH domain and HEAT repeat-containing protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
Physical Location & Seq
Reverse (-)
32745860 .. 32757902
12043 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1255900.v1.1.491

Sequence Viewer

Length: 3471 bp
ATGGACGTGGAGAGGTCGTCGTTGTGCAATTGCGTCGTGAATTTTCTGCTCGAGGAGAACTACCTGCTCACGGCGTTCGAGCTACTCCACGAGCTGCTCGACGATGGCAGAGACGACCAGGCCATTCGACTCAAGGACTTCTTCGCCGACTCCACTCAATTCCCTCCCGATCAGATCTCTCGCTTCAACTCTCTCCGAGTTGCAGACCCTCAATGTTTGCTAGAGGAGAAAGAAGCAGTAGAAGAAAAATTAGCAATTAGTGAATATGAGCTTCGCTTAGCCCAAGAGGACATTTCGAAACTGAAGGCTGAATTGCAGAAGAAAGCAGAATCACCTTCAAATGAATTGAGAGATTCAAATGCCAATGTTTCCGTAAATAATGGACCAGAATTTCAGCGGCAAAAGAGAGATGTTTCCTTTTCTGATTTGGGTCTGTTGAAAGATAACGAACGCAGAGATCTTAACTGTGCAGTAAAAGAATATTTGCTTATAGCGGGGTACCGGCTTACTGCAATGACATTTTTTGAGGAGGTCACAGATCAGAATCTAGATGTTTGGAAGAACTCACCTGCATGTGTGCCAGATGCACTGCGCCATTATTATTATCAGTATCTTTCATCCACTACAGAGGCTGCTGAGGAGAAAATTTCCATGCTCCGAGAAAATGATTCATTATCAAAAGAAAAGGAGAGTCTATATCTTGAAAAGCTATCCTTACTTAAAAACAAAGATTTGGCTGAAGGCCAAATAAGTACTCTAATCAAATCATTGGAAGCTCTTCAGAAGGATCTTAAAGACAAAGAAAACCTTGTACAAGATCTGAAGAAGTCCTTGGAACACCAGAGAAAGGAGCTCAATGATTGCAGAGCTGAAGTCACTGCATTGAAAATGCACATTGAAGGATATCGTTCTGGACGGAATATGGTAGCTGCTGATGCTGATCAAATCCAACCTCTGTCCTTGGAAAAATACAAGGAAGAAATTAAATCACTACAGATGGAACTAGAAAGTTTAAAATCCAAAAACGCAAAAGCTAATGATTATTCAGATTCCACCAATTTTGGAAAAGAGCCTGTGCAAATGGAAGAAAAGGTCGTTGTCGTGGATGAAGATAAAAGCATAATCCCAGCAATTGATGTAGAATCGAGAGTTGTGGAAAAGGAAGAAGATCAGTCTCTGGCTGCTCAAACTTTTCATGATAACACAGTTAAACCGAAGGAAGTTTCACATGAGGTTTCTGTCGGTGTGTTAAGCGATAGTAGTACCTTGGTGAATGGTGATAGCGTCTCCAGACAAAATGGTGAACCTTCATCAGGCAGCAGCCTACATTTAACGTCAGAGAAGCTTAGTCCTGAAGATGTTTCCGAGAAAAGGGGCTTAGAGACCATTCAGATCCTTGCTGATGCTTTGCCGAAGATTGTTCCTTATGTTTTGATCAACCATCGGGAGGAGCTTCTTCCCCTAATCATGTGTGCGATTGAACGCCATCCAGATAGCAGCACTCGGGATTCCTTAACCCACACATTGTTTAATCTAATCAAACGCCCAGATGAGCAGCAGAGAAGAATTATAATGGATGCATGTGTTACCCTTGCTAAGGATGTAGGAGAGATGAGAACAGAAACAGAATTGCTTCCCCAGTGTTGGGAACAAATAAATCATATGTATGAGGAACGCAGGCTGCTAGTTGCTCAATCATGTGGAGAGCTTGCAGAATTTGTCCGTCCTGAGATTCGTGATTCTCTTATATTGTCCATTGTTCAACAACTCATTGAAGATTCTGCAACTATTGTCCGCGAGGCTGCTGCACATAATCTTGCATTGCTGCTTCCACTCTTCCCGAACATGGACAAATATTACAAGGTTGAGGACTTGATGTTCCAATTGGTCTGTGATCCCTCTGGAGTGGTGGTGGAAACGACGCTTAAGCAATTAGTTCCTGCAGTAAACAAGTGGGGAAACAAATTAGACCATATCTTAAGAGTTCTACTCTCTCATATATCAAGTTCTGTTCAGCGCTGTCCTCCTCTTTCGGGTGTTGAAGGTTCTGTGGAGTCACATCTTCGTGTTTTAGGTGAACGAGAACGCTGGAATGTTGATGTTTTACTACGAATGCTAGTGGAAATTATTCCTTATGTGCACCAGAAAGCAATTGAGATGTGCCCAGTTTCATCTGATCCTGAAACAACTGGAACCATATTTTCCAAATCTTTCCTTGAATTGTATGCAGGTGGACATGTTCAATTGCCTGCATTTGAGTGGCTGCATGTCGACTGCTTTCCTGCTTTAATACAACTCGCATGCTTGTTACCTCCAAAAGAGGATAATTTGCGAAACCAAATTACCAAGTTTCTATTGGCTGTATCAGAACTCTATGGGGATTCTTATTTGACACACATAATGCTGCCTGTATTCTTGGTAGCCGTTGGGGAAGATGCTGAATTGACATTTTTTCCATCTGCAACCCATTCCGGAATCAAAGGTTTGAGGCCAAGAACGGCTGTGGCTAATAGATTGGCTACCATGTGTGTCCTGCCTCTTCTCTTGGCTGGTGTTTTGGGTGGTCCAAGCAAGCATGAACAATTACTGGAGTACCTGAGAAAGCTATTAGTTGAAGGTGTTGCAAATCAATCTACGAAGTGCAATGCTGAGATTGTTGATGCTGTTCGCTTCCTTTGCACATTTGAAGATCATCATGGTATGATATTTAACTTACTCTGGGAAATGGTTGTCAGCTCGAACATAGATATGAAAATAAATGCCGCCAATCTGTTGAAAGTCATTGTTCCATATATCGATGCGAAAGTTGCATCAACTCATATATTGCCTGCCCTAGTTACTCTGGGCTCTGACCAAAACCTGAGTGTGAAGTATGCAAGCATAGATGCCTTTGGAGCAGTGGCCCAACATTTTAAAAATGACATGATTGTTGATAAGATACGTGTTCAAATGGATGCTTTTCTTGAAGATGGATCTCATGAAGCTACCATTGCTGTGATTTTTCAACTGACAGCCACTCCACCTTCAAGTGACTTGATGCGGCGGCGTGAGAGAGCCAACGCATTTTGTGAAGCAATCCGTGCTCTGGATGCAACAGATATTTCGGCAACTAGTGTTCGGGACTTCCTTATGCCTGCGATACAGAACTTGTTGAGAGACACTGATGCGCTTGATCCTGCACACAAAGAAGCCCTTGAAATTGTAATGAAGGAGAGATCTGGTGGAACCTTTGACACTATCAGTAAGGTGATGGGGGCTGGGCTTGCATCCTCCGTGAGTAGTTTCTTTGGTGAAGGTGGTCTACTGGGAAAGAAAGAAAGTCCCGAGCCACCACCAGAGCCGGTTGAGTCCCCGAAGGCTGCACCATTACCACCTGCAGAAGACACTAGATTAAGGAGAATCATGCGGGGAAATTTCACTGACATGCTGAGAGGCAAAGCAAGGGGACCAGAGGAAACTCAGAACCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1157

Amino Acids

129.51

Weight (kDa)

5.05

Isoelectric Point (pI)

48.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1571
AarI CACCTGC 3 cut(s) 577, 2219, 3382
Acc36I ACCTGC 4 cut(s) 72, 577, 2219, 3382
Acc65I GGTACC 1 cut(s) 498
AccB1I GGYRCC 1 cut(s) 498
AccI GTMKAC 2 cut(s) 2271, 3301
AccII CGCG 1 cut(s) 1797
AccIII TCCGGA 1 cut(s) 2471
AciI CCGC 7 cut(s) 397, 494, 1795, 2763, 3040, 3043, 3406
AclWI GGATC 6 cut(s) 795, 1387, 1889, 2171, 2980, 3167
AcsI RAATTY 5 cut(s) 40, 389, 645, 1715, 3412
AcuI CTGAAG 6 cut(s) 323, 759, 764, 842, 891, 1374
AfaI GTAC 5 cut(s) 500, 754, 813, 1264, 2594
AfeI AGCGCT 1 cut(s) 2018
AflII CTTAAG 2 cut(s) 1925, 1978
AflIII ACRYGT 2 cut(s) 2236, 2941
AhlI ACTAGT 1 cut(s) 3110
AjiI CACGTC 1 cut(s) 7
AjnI CCWGG 1 cut(s) 117
AjuI GAANNNNNNNTTGG 2 cut(s) 815, 847
AloI GAACNNNNNNTCC 2 cut(s) 1862, 1894
Alw21I GWGCWC 3 cut(s) 855, 2142, 3085
Alw26I GTCTC 5 cut(s) 105, 1179, 1291, 1376, 3150
Alw44I GTGCAC 1 cut(s) 2138
AlwI GGATC 6 cut(s) 795, 1387, 1889, 2171, 2980, 3167
AlwNI CAGNNNCTG 2 cut(s) 632, 1177
Ama87I CYCGRG 3 cut(s) 50, 1503, 3323
Aor13HI TCCGGA 1 cut(s) 2471
Aor51HI AGCGCT 1 cut(s) 2018
AoxI GGCC 4 cut(s) 120, 742, 2489, 2901
ApaLI GTGCAC 1 cut(s) 2138
ApoI RAATTY 5 cut(s) 40, 389, 645, 1715, 3412
Asp700I GAANNNNTTC 3 cut(s) 777, 1632, 2127
Asp718I GGTACC 1 cut(s) 498
AspLEI GCGC 3 cut(s) 594, 2019, 3169
AspS9I GGNCC 4 cut(s) 383, 2564, 2902, 3446
AsuHPI GGTGA 8 cut(s) 324, 558, 1282, 1289, 1313, 2087, 3259, 3302
AsuII TTCGAA 1 cut(s) 296
AvaI CYCGRG 3 cut(s) 50, 1503, 3323
AvaII GGWCC 3 cut(s) 383, 2564, 3446
BaeGI GKGCMC 2 cut(s) 2142, 2165
BaeI ACNNNNGTAYC 2 cut(s) 2576, 2609
BanI GGYRCC 1 cut(s) 498
BanII GRGCYC 2 cut(s) 855, 2849
BarI GAAGNNNNNNTAC 2 cut(s) 3285, 3317
BauI CACGAG 1 cut(s) 89
BbsI GAAGAC 1 cut(s) 3387
Bbv12I GWGCWC 3 cut(s) 855, 2142, 3085
BbvCI CCTCAGC 1 cut(s) 636
BccI CCATC 7 cut(s) 98, 991, 1449, 1494, 2464, 2963, 3244
BceAI ACGGC 3 cut(s) 87, 2408, 2514
BcgI CGANNNNNNTGC 4 cut(s) 16, 50, 1787, 1821
BciT130I CCWGG 1 cut(s) 119
BclI TGATCA 2 cut(s) 940, 1434
BcoDI GTCTC 5 cut(s) 105, 1179, 1291, 1376, 3150
BcuI ACTAGT 1 cut(s) 3110
BfaI CTAG 8 cut(s) 221, 548, 1004, 1685, 2117, 2834, 3111, 3387
BfmI CTRYAG 4 cut(s) 624, 992, 1941, 3375
BfoI RGCGCY 1 cut(s) 2020
BfrI CTTAAG 2 cut(s) 1925, 1978
BfuAI ACCTGC 4 cut(s) 72, 577, 2219, 3382
BglII AGATCT 4 cut(s) 174, 457, 817, 3215
BlpI GCTNAGC 1 cut(s) 277
BmcAI AGTACT 1 cut(s) 754
Bme1390I CCNGG 1 cut(s) 119
Bme18I GGWCC 3 cut(s) 383, 2564, 3446
BmeT110I CYCGRG 3 cut(s) 50, 1503, 3323
BmgBI CACGTC 1 cut(s) 7
BmgT120I GGNCC 4 cut(s) 383, 2564, 2902, 3446
BmiI GGNNCC 4 cut(s) 500, 2194, 3226, 3447
BmrFI CCNGG 1 cut(s) 119
BmrI ACTGGG 3 cut(s) 1633, 2159, 3314
BmuI ACTGGG 3 cut(s) 1633, 2159, 3314
BpiI GAAGAC 1 cut(s) 3387
BplI GAGNNNNNCTC 2 cut(s) 1974, 2006
BpmI CTGGAG 3 cut(s) 1273, 1923, 2609
Bpu10I CCTNAGC 2 cut(s) 636, 1596
Bpu1102I GCTNAGC 1 cut(s) 277
Bpu14I TTCGAA 1 cut(s) 296
BpuEI CTTGAG 1 cut(s) 116
Bsa29I ATCGAT 1 cut(s) 2796
BsaAI YACGTR 1 cut(s) 2942
BsaBI GATNNNNATC 2 cut(s) 543, 939
BsaI GGTCTC 1 cut(s) 1376
BsaJI CCNNGG 3 cut(s) 831, 960, 1266
BsaWI WCCGGW 1 cut(s) 2471
BsaXI ACNNNNNCTCC 5 cut(s) 32, 1896, 1926, 3001, 3031
Bse118I RCCGGY 2 cut(s) 501, 3340
Bse1I ACTGG 5 cut(s) 1639, 2165, 2194, 2592, 3309
Bse3DI GCAATG 4 cut(s) 519, 1820, 2650, 2988
Bse8I GATNNNNATC 2 cut(s) 543, 939
BseAI TCCGGA 1 cut(s) 2471
BseBI CCWGG 1 cut(s) 119
BseCI ATCGAT 1 cut(s) 2796
BseDI CCNNGG 3 cut(s) 831, 960, 1266
BseGI GGATG 8 cut(s) 617, 1111, 1486, 1582, 1606, 2959, 3094, 3266
BseJI GATNNNNATC 2 cut(s) 543, 939
BseMI GCAATG 4 cut(s) 519, 1820, 2650, 2988
BseMII CTCAG 6 cut(s) 627, 1719, 2588, 2640, 2852, 3419
BseNI ACTGG 5 cut(s) 1639, 2165, 2194, 2592, 3309
BseRI GAGGAG 6 cut(s) 68, 239, 542, 653, 1463, 2016
BseSI GKGCMC 2 cut(s) 2142, 2165
BseYI CCCAGC 2 cut(s) 1126, 3257
BsgI GTGCAG 4 cut(s) 489, 1791, 3162, 3345
Bsh1236I CGCG 1 cut(s) 1797
BshFI GGCC 4 cut(s) 122, 744, 2491, 2903
BshNI GGYRCC 1 cut(s) 498
BshVI ATCGAT 1 cut(s) 2796
BsiHKAI GWGCWC 3 cut(s) 855, 2142, 3085
BsiHKCI CYCGRG 3 cut(s) 50, 1503, 3323
BsiSI CCGG 3 cut(s) 502, 2472, 3341
BslFI GGGAC 4 cut(s) 3134, 3306, 3334, 3459
BsmAI GTCTC 5 cut(s) 105, 1179, 1291, 1376, 3150
BsmBI CGTCTC 2 cut(s) 105, 1291
BsmFI GGGAC 4 cut(s) 3134, 3306, 3334, 3459
BsmI GAATGC 1 cut(s) 2118
BsnI GGCC 4 cut(s) 122, 744, 2491, 2903
Bso31I GGTCTC 1 cut(s) 1376
BsoBI CYCGRG 3 cut(s) 50, 1503, 3323
Bsp119I TTCGAA 1 cut(s) 296
Bsp1286I GDGCHC 5 cut(s) 855, 2142, 2165, 2849, 3085
Bsp13I TCCGGA 1 cut(s) 2471
Bsp1407I TGTACA 1 cut(s) 811
Bsp1720I GCTNAGC 1 cut(s) 277
BspACI CCGC 7 cut(s) 397, 494, 1795, 2763, 3040, 3043, 3406
BspANI GGCC 4 cut(s) 122, 744, 2491, 2903
BspCNI CTCAG 6 cut(s) 628, 1720, 2589, 2641, 2853, 3420
BspDI ATCGAT 1 cut(s) 2796
BspEI TCCGGA 1 cut(s) 2471
BspFNI CGCG 1 cut(s) 1797
BspHI TCATGA 2 cut(s) 1195, 2977
BspLI GGNNCC 4 cut(s) 500, 2194, 3226, 3447
BspMAI CTGCAG 2 cut(s) 1945, 3379
BspMI ACCTGC 4 cut(s) 72, 577, 2219, 3382
BspPI GGATC 6 cut(s) 795, 1387, 1889, 2171, 2980, 3167
BspQI GCTCTTC 1 cut(s) 783
BspT104I TTCGAA 1 cut(s) 296
BspT107I GGYRCC 1 cut(s) 498
BspTI CTTAAG 2 cut(s) 1925, 1978
BspTNI GGTCTC 1 cut(s) 1376
BsrDI GCAATG 4 cut(s) 519, 1820, 2650, 2988
BsrFI RCCGGY 2 cut(s) 501, 3340
BsrGI TGTACA 1 cut(s) 811
BsrI ACTGG 5 cut(s) 1639, 2165, 2194, 2592, 3309
BssAI RCCGGY 2 cut(s) 501, 3340
BssECI CCNNGG 3 cut(s) 831, 960, 1266
BssSI CACGAG 1 cut(s) 89
BssT1I CCWWGG 3 cut(s) 831, 960, 1266
Bst2BI CACGAG 1 cut(s) 89
Bst2UI CCWGG 1 cut(s) 119
Bst4CI ACNGT 2 cut(s) 467, 1207
Bst6I CTCTTC 3 cut(s) 783, 1841, 2544
BstAFI CTTAAG 2 cut(s) 1925, 1978
BstAPI GCANNNNNTGC 1 cut(s) 3080
BstAUI TGTACA 1 cut(s) 811
BstBAI YACGTR 1 cut(s) 2942
BstBI TTCGAA 1 cut(s) 296
BstC8I GCNNGC 9 cut(s) 1679, 1710, 2250, 2302, 2573, 2829, 2878, 3135, 3264
BstENI CCTNNNNNAGG 2 cut(s) 1311, 1595
BstF5I GGATG 8 cut(s) 617, 1111, 1486, 1582, 1606, 2959, 3094, 3266
BstFNI CGCG 1 cut(s) 1797
BstH2I RGCGCY 1 cut(s) 2020
BstHHI GCGC 3 cut(s) 594, 2019, 3169
BstMAI GTCTC 5 cut(s) 105, 1179, 1291, 1376, 3150
BstMWI GCNNNNNNNGC 8 cut(s) 935, 2676, 2807, 2894, 2990, 3080, 3089, 3263
BstNI CCWGG 1 cut(s) 119
BstNSI RCATGY 6 cut(s) 576, 1584, 2240, 2270, 2304, 3427
BstSCI CCNGG 1 cut(s) 117
BstSFI CTRYAG 4 cut(s) 624, 992, 1941, 3375
BstSLI GKGCMC 2 cut(s) 2142, 2165
BstUI CGCG 1 cut(s) 1797
BstV2I GAAGAC 1 cut(s) 3387
BstX2I RGATCY 7 cut(s) 174, 457, 787, 817, 1392, 2972, 3215
BstYI RGATCY 7 cut(s) 174, 457, 787, 817, 1392, 2972, 3215
Bsu15I ATCGAT 1 cut(s) 2796
BsuRI GGCC 4 cut(s) 122, 744, 2491, 2903
BsuTUI ATCGAT 1 cut(s) 2796
BtrI CACGTC 1 cut(s) 7
BtsCI GGATG 8 cut(s) 617, 1111, 1486, 1582, 1606, 2959, 3094, 3266
BtsI GCAGTG 3 cut(s) 587, 876, 2904
BtsIMutI CAGTG 6 cut(s) 587, 876, 1646, 2904, 3159, 3417
BveI ACCTGC 4 cut(s) 72, 577, 2219, 3382
Cac8I GCNNGC 9 cut(s) 1679, 1710, 2250, 2302, 2573, 2829, 2878, 3135, 3264
CaiI CAGNNNCTG 2 cut(s) 632, 1177
CciI TCATGA 2 cut(s) 1195, 2977
CfoI GCGC 3 cut(s) 594, 2019, 3169
Cfr10I RCCGGY 2 cut(s) 501, 3340
Cfr13I GGNCC 4 cut(s) 383, 2564, 2902, 3446
ClaI ATCGAT 1 cut(s) 2796
CseI GACGC 3 cut(s) 22, 1273, 1930
Csp6I GTAC 5 cut(s) 499, 753, 812, 1263, 2593
CspCI CAANNNNNGTGG 2 cut(s) 1042, 1077
CviQI GTAC 5 cut(s) 499, 753, 812, 1263, 2593
DraI TTTAAA 2 cut(s) 1014, 2914
Eam1104I CTCTTC 3 cut(s) 783, 1841, 2544
EarI CTCTTC 3 cut(s) 783, 1841, 2544
Ecl136II GAGCTC 1 cut(s) 853
Eco130I CCWWGG 3 cut(s) 831, 960, 1266
Eco24I GRGCYC 2 cut(s) 855, 2849
Eco31I GGTCTC 1 cut(s) 1376
Eco32I GATATC 1 cut(s) 905
Eco47I GGWCC 3 cut(s) 383, 2564, 3446
Eco47III AGCGCT 1 cut(s) 2018
Eco53kI GAGCTC 1 cut(s) 853
Eco57I CTGAAG 6 cut(s) 323, 759, 764, 842, 891, 1374
Eco88I CYCGRG 3 cut(s) 50, 1503, 3323
EcoICRI GAGCTC 1 cut(s) 853
EcoNI CCTNNNNNAGG 2 cut(s) 1311, 1595
EcoRII CCWGG 1 cut(s) 117
EcoRV GATATC 1 cut(s) 905
EcoT14I CCWWGG 3 cut(s) 831, 960, 1266
EcoT22I ATGCAT 1 cut(s) 1582
EcoT38I GRGCYC 2 cut(s) 855, 2849
ErhI CCWWGG 3 cut(s) 831, 960, 1266
Esp3I CGTCTC 2 cut(s) 105, 1291
FaqI GGGAC 4 cut(s) 3134, 3306, 3334, 3459
FauI CCCGC 2 cut(s) 487, 3399
FauNDI CATATG 1 cut(s) 1662
FbaI TGATCA 2 cut(s) 940, 1434
FblI GTMKAC 2 cut(s) 2271, 3301
FokI GGATG 8 cut(s) 604, 1118, 1473, 1589, 1613, 2966, 3101, 3253
FriOI GRGCYC 2 cut(s) 855, 2849
FspBI CTAG 8 cut(s) 221, 548, 1004, 1685, 2117, 2834, 3111, 3387
GlaI GCGC 3 cut(s) 593, 2018, 3168
GsaI CCCAGC 2 cut(s) 1130, 3261
GsuI CTGGAG 3 cut(s) 1273, 1923, 2609
HaeII RGCGCY 1 cut(s) 2020
HaeIII GGCC 4 cut(s) 122, 744, 2491, 2903
HapII CCGG 3 cut(s) 502, 2472, 3341
HgaI GACGC 3 cut(s) 22, 1273, 1930
HhaI GCGC 3 cut(s) 594, 2019, 3169
Hin6I GCGC 3 cut(s) 592, 2017, 3167
HinP1I GCGC 3 cut(s) 592, 2017, 3167
HincII GTYRAC 1 cut(s) 2272
HindII GTYRAC 1 cut(s) 2272
HindIII AAGCTT 1 cut(s) 1343
HpaII CCGG 3 cut(s) 502, 2472, 3341
HphI GGTGA 8 cut(s) 324, 558, 1282, 1289, 1313, 2087, 3259, 3302
Hpy166II GTNNAC 7 cut(s) 1304, 1948, 2078, 2140, 2234, 2272, 3302
Hpy8I GTNNAC 7 cut(s) 1304, 1948, 2078, 2140, 2234, 2272, 3302
Hpy99I CGWCG 4 cut(s) 22, 38, 104, 1924
HpyCH4III ACNGT 2 cut(s) 467, 1207
HpyCH4IV ACGT 3 cut(s) 6, 1334, 2941
HpyF10VI GCNNNNNNNGC 8 cut(s) 935, 2676, 2807, 2894, 2990, 3080, 3089, 3263
HpySE526I ACGT 3 cut(s) 6, 1334, 2941
HspAI GCGC 3 cut(s) 592, 2017, 3167
Kpn2I TCCGGA 1 cut(s) 2471
KpnI GGTACC 1 cut(s) 502
Ksp22I TGATCA 2 cut(s) 940, 1434
LguI GCTCTTC 1 cut(s) 783
LmnI GCTCC 4 cut(s) 660, 850, 1450, 2894
MaeI CTAG 8 cut(s) 221, 548, 1004, 1685, 2117, 2834, 3111, 3387
MaeII ACGT 3 cut(s) 6, 1334, 2941
MaeIII GTNAC 7 cut(s) 532, 874, 1585, 2055, 2307, 2836, 3029
MfeI CAATTG 5 cut(s) 28, 1131, 1883, 2151, 2243
MflI RGATCY 7 cut(s) 174, 457, 787, 817, 1392, 2972, 3215
MhlI GDGCHC 5 cut(s) 855, 2142, 2165, 2849, 3085
MlyI GAGTC 5 cut(s) 123, 143, 700, 2063, 3356
MmeI TCCRAC 1 cut(s) 973
Mph1103I ATGCAT 1 cut(s) 1582
MroI TCCGGA 1 cut(s) 2471
MroXI GAANNNNTTC 3 cut(s) 777, 1632, 2127
MslI CAYNNNNRTG 7 cut(s) 571, 1665, 2064, 2257, 2747, 2993, 3422
MspA1I CMGCKG 1 cut(s) 397
MspCI CTTAAG 2 cut(s) 1925, 1978
MspI CCGG 3 cut(s) 502, 2472, 3341
MspR9I CCNGG 1 cut(s) 119
MunI CAATTG 5 cut(s) 28, 1131, 1883, 2151, 2243
Mva1269I GAATGC 1 cut(s) 2118
MvaI CCWGG 1 cut(s) 119
MvnI CGCG 1 cut(s) 1797
MwoI GCNNNNNNNGC 8 cut(s) 935, 2676, 2807, 2894, 2990, 3080, 3089, 3263
NdeI CATATG 1 cut(s) 1662
NlaIV GGNNCC 4 cut(s) 500, 2194, 3226, 3447
NmuCI GTSAC 4 cut(s) 532, 874, 2055, 3029
NsiI ATGCAT 1 cut(s) 1582
NspI RCATGY 6 cut(s) 576, 1584, 2240, 2270, 2304, 3427
NspV TTCGAA 1 cut(s) 296
PaeI GCATGC 1 cut(s) 2304
PaeR7I CTCGAG 1 cut(s) 50
PagI TCATGA 2 cut(s) 1195, 2977
PaqCI CACCTGC 3 cut(s) 577, 2219, 3382
PciI ACATGT 1 cut(s) 2236
PciSI GCTCTTC 1 cut(s) 783
PcsI WCGNNNNNNNCGW 1 cut(s) 96
PctI GAATGC 1 cut(s) 2118
PdmI GAANNNNTTC 3 cut(s) 777, 1632, 2127
PleI GAGTC 5 cut(s) 123, 143, 699, 2062, 3355
PpsI GAGTC 5 cut(s) 123, 143, 699, 2062, 3355
Ppu21I YACGTR 1 cut(s) 2942
PscI ACATGT 1 cut(s) 2236
PsiI TTATAA 1 cut(s) 1571
Psp124BI GAGCTC 1 cut(s) 855
Psp6I CCWGG 1 cut(s) 117
PspFI CCCAGC 2 cut(s) 1126, 3257
PspGI CCWGG 1 cut(s) 117
PspN4I GGNNCC 4 cut(s) 500, 2194, 3226, 3447
PspPI GGNCC 4 cut(s) 383, 2564, 2902, 3446
PspXI VCTCGAGB 1 cut(s) 50
PstI CTGCAG 2 cut(s) 1945, 3379
PstNI CAGNNNCTG 2 cut(s) 632, 1177
PsuI RGATCY 7 cut(s) 174, 457, 787, 817, 1392, 2972, 3215
RsaI GTAC 5 cut(s) 500, 754, 813, 1264, 2594
RsaNI GTAC 5 cut(s) 499, 753, 812, 1263, 2593
RseI CAYNNNNRTG 7 cut(s) 571, 1665, 2064, 2257, 2747, 2993, 3422
SacI GAGCTC 1 cut(s) 855
SalI GTCGAC 1 cut(s) 2270
SapI GCTCTTC 1 cut(s) 783
Sau96I GGNCC 4 cut(s) 383, 2564, 2902, 3446
ScaI AGTACT 1 cut(s) 754
SchI GAGTC 5 cut(s) 123, 143, 700, 2063, 3356
ScrFI CCNGG 1 cut(s) 119
SduI GDGCHC 5 cut(s) 855, 2142, 2165, 2849, 3085
SfcI CTRYAG 4 cut(s) 624, 992, 1941, 3375
Sfr274I CTCGAG 1 cut(s) 50
SfuI TTCGAA 1 cut(s) 296
SinI GGWCC 3 cut(s) 383, 2564, 3446
SlaI CTCGAG 1 cut(s) 50
SmiMI CAYNNNNRTG 7 cut(s) 571, 1665, 2064, 2257, 2747, 2993, 3422
SmlI CTYRAG 4 cut(s) 50, 131, 1925, 1978
SmoI CTYRAG 4 cut(s) 50, 131, 1925, 1978
SpeI ACTAGT 1 cut(s) 3110
SphI GCATGC 1 cut(s) 2304
SsiI CCGC 7 cut(s) 397, 494, 1795, 2763, 3040, 3043, 3406
SspI AATATT 2 cut(s) 482, 1856
SspMI CTAG 8 cut(s) 221, 548, 1004, 1685, 2117, 2834, 3111, 3387
SstI GAGCTC 1 cut(s) 855
StyD4I CCNGG 1 cut(s) 117
StyI CCWWGG 3 cut(s) 831, 960, 1266
TaaI ACNGT 2 cut(s) 467, 1207
TaiI ACGT 3 cut(s) 9, 1337, 2944
TaqI TCGA 9 cut(s) 51, 78, 99, 127, 296, 1145, 2271, 2738, 2796
TatI WGTACW 2 cut(s) 752, 811
TauI GCSGC 4 cut(s) 400, 2765, 3043, 3046
TscAI CASTG 6 cut(s) 594, 883, 1646, 2904, 3166, 3424
TseFI GTSAC 4 cut(s) 532, 874, 2055, 3029
Tsp45I GTSAC 4 cut(s) 532, 874, 2055, 3029
TspGWI ACGGA 5 cut(s) 361, 931, 1712, 3068, 3262
TspRI CASTG 6 cut(s) 594, 883, 1646, 2904, 3166, 3424
Vha464I CTTAAG 2 cut(s) 1925, 1978
VneI GTGCAC 1 cut(s) 2138
VpaK11BI GGWCC 3 cut(s) 383, 2564, 3446
XagI CCTNNNNNAGG 2 cut(s) 1311, 1595
XapI RAATTY 5 cut(s) 40, 389, 645, 1715, 3412
XbaI TCTAGA 1 cut(s) 547
XceI RCATGY 6 cut(s) 576, 1584, 2240, 2270, 2304, 3427
XcmI CCANNNNNNNNNTGG 1 cut(s) 2353
XhoI CTCGAG 1 cut(s) 50
XmiI GTMKAC 2 cut(s) 2271, 3301
XmnI GAANNNNTTC 3 cut(s) 777, 1632, 2127
XspI CTAG 8 cut(s) 221, 548, 1004, 1685, 2117, 2834, 3111, 3387
ZrmI AGTACT 1 cut(s) 754
Zsp2I ATGCAT 1 cut(s) 1582
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.