RH3DG349300

LisH domain and HEAT repeat-containing protein

Basic Information

Type: Sequence Only
Biological Identity
rosa_samantha
Unknown
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG349300.1

Sequence Viewer

Length: 3522 bp
ATGGACGTGGAAAAGTCGTCTTTGTGCAATTGCGTGGTGAACTTTCTGCTGGAGGAGAACTACTTACTGACGGCATTCGAGCTCCTCCACGAGCTTCTCGACGATGGCAGAGACGATCAGGCCATTCGTCTCAAAAACTTCTTCTCCGACTCCTCCCAATTCCCTCCCGAACAGATCTCTCGCTTCAACTCTCTCCGAGTTGCAGATCCTCAAAGTTTGCTTCAGGAGAAAGAAGCAGTAGAAGAAAAATTAGCAATTAGTGAATATGAGCTTCGTTTAGCCCAAGAGGACATTTTGAAATTCAAGACTGAATTGCAGAAGAAAGCAGAATCACCAGTAACTGAATTGAGGGAGTCAAATACCAGTGTAAATAACGGACCCCAATATCAGCGGCAAAAGACAGATGTCTCCTTCTCGGATTTGGGTCCCTTGAAAGATAATGAACGTCGAGATCTTAACTGTGCTGTAAAGGAATATTTGCTAATAGCAGGTTACCGGCTTACTGCAATGACGTTTTTCGAAGAGGTCACAGACCAGAATCTAGATGTTTGGCAGAATTCACCCGCATGTGTACCAGATGCCCTGCGCCATTATTATTATCAGTATCTTTCATCCACTACAGAGGCTGCTGAGGAGAAAATTTCCATGCTTCGGAAAAATGAGTCGTTATTGGAAAAAAATGAGAAGCTAAATCATGAAAAGCTGTGCTTGGTTAAAAACAAAGACATGGCTGAAGGTCAAATAAGTGCACTGAACAAATCATTGGAATCTCTTCAGAAGGACCTTAAAGACAAAGAGAACCTTGTACAAGATTTGAAGCAGTCCTTGGAGCACCAAAGAAAGGAGCTCAATGATTGTAGAGCTGAAGTCACTGCATTGAAAATGCACATTGAAGGATCTCGTTTGGGACGAAATATGGTAGCCACTGATGTTGATCATGTGCAATCCCTGTCATTGGAAAAATACAAAGAAGAGGTGAAATCACTGCAGATGGAACTAGAAATTTTAAGATCCAATATCGCAAATGCTCCCGATTATATAGTTTCTGTCCAAGCTGGGAAAGAGTCCGTGCAGATGGAAGAAAAGGTCGTGATCATGGATGAAGAGAAAAGTATAATCCAGCATCCAGTTGATGCAATAACAAGAGTTGTGGAAGAAGCTGATCAATCACTAGCTGCTGATGACAACCTAATTACACCTAAGGAAGTCTCAGACGAATATTCAGTCAATCCTTCAAATGGTAGTACTGCCTTGACAAATGGTGAAAGTGTCTCCAAACAAAATGTTGAACCATCTGCATCTACCATGTTACATCTAACAAGAGAGGATCATACTGCTGAAACTGCTTCAGAGAAAAGGGGTCTACAGGCCATTCAGATCCTTGCTGATGCCTTACCCAAGATTGTTCCTTATGTTCTAATCAACCACCGCGAGGAGCTACTTCCTCTGATCATGTGTGCTATTGAGCGCCATCCAGAGAGCAGTACTCGAGATTCCTTGACCCACACATTGTTTAATCTAATCAAACGTCCAGATCACCAGCAAAGAAGAATTATAATGGATGCATGCGTCAGCCTTGCTCAGAATGTAGGAGAGATGAGAACAGAAACAGAGTTGCTTCCCCAGTGTTGGGAGCAAATAAATCATACCTATGAGGAACGCAGGTTGCTAGTTGCTCAATCATGTGGAGAGCTTGCAGAATTTGTTCGGCCTGAGATCCGTGATTCTCTTATCTTATCTATTGTTCAACAACTCATAGAAGATTCTGCAACTGTTGTCCGGGAGGCTGCTGTACATAATCTTGCATTGCTGCTTCCACTCTTTCCAAATATGGACAAATATTTCAAGGTTGAGGAATTGATGTTCCAATTGGTCTGCGATCCCTCTGGAGTGGTGGTGGAATCTACACTCAAAGAATTAGTCCCTGCAGTAATCAAGTGGGGACACAAATTAGACCATGTTTTAAGAGTTCTACTATCTCATATATTGAGCTCCGCTGAGCGCTGCCCTCCACTTTCGGGGGTTGAAGGGTCTGTGGAGTCGCATCTTCGTGTGTTAGGAGAACGAGAACGCTGGAATGTTGATGTTTTATTACGGATGCTACTGGAAATGCTTCCATCTGTGCACCAGAAGGCGATTGAGATGTCCCCATTTTCTTCTGATCCTGAAACAACTGGAACAATATTTTCTACACCTTTCCTTGAATTATATGCAGGGGGACATGTTCAATTGCCTGCTTTTGAGTGGTTGCATGTCGACTGCATACCCGATTTGATAGAGCTTGCCTGCTTGCTACCTCCAAAAGAAGATACTTTGCGAAATCGAATCACCAGGTTTTTGTTGGCTGTATCTGAACACTACGGGGATTCTTATTTGACACATATATTGCTCCCTATATTCCTTATAGCCATTGGGGAAGATGCTCTTTTGACATATTTCCCGTCTGAAAGCCATTCCAAAATTGAAGGTTTGATGCCAAGGACTGCTGTGGCTAAGAGACTGGCTACTATGTGCATCTTACCTCTTCTCTTGGCTGGAGTTTTGGGTGCCCCTAGCAAGCATGAACAATTAGTGGAGTATTTGAGAAAGCTATTAGTTGAAGGTGTGGGAAATCAGTCTACAAAGTGCAATGCTGAGATTATTGATGCTGTCCGCTTCCTGTGCACATGTGAAGTTCATCATGGCATGATATTTAATATACTCTGGGAAATGGTTGTCAGCTCCAACATAGATATGAAAATCAATGCGGCCAATCTGTTGAAAGTTATTGTTCCATATATCGATGCAAAAGTTGCATCTACTCATATTTTGCCCGCCCTAGTAACTCTGGGCTCTGACCAAAACCTTAGTGTGAAGTATGCAAGCATAGTTTCCTTTGGAGCTGTCGCCCAACATTTTAAAAATGATATGATTGTCGATAAGATACGGGTTCAGATGGATGCTTTTCTTGAAGATGGATCCCATGAAGCTACCATTGCTGTGGTTCATGCATTGGTAGTTGCTGTACCTCATACAACGGATAGACTTAAAGATTATCTTTTATCCAAGATTTTTCACCTTACTGCCAGTCTGCCTGCGAGTGACATGATGCGTCGTCGCGAGAGAGCAAATGCATTCTGTGAAGCAATCCGTGCTTTAGATGCAACAGATATTTCAGCAACCAGTGTACGAGAATTCCTCCTACCTACCATCCAGAACCTATTGAAGGACTCAGATGCACTGGATCCAGTACACAAGGAAGCCCTTGAAATTATAATGAAGGAGAGATCTGGTGGTACCTTTGAGACCATCAGTAAGGTGATGGGTGCTGGACTTGCATCCTCTGTGAGTAGTTTCTTTGGTGAAGGTGGGCTACTGGGCAAGAAGGATAGTGTTGAGCCACTGCCAGAGCCAGCTGAGTCCCCGAAGTCTGCACCACTGCCACCAGTAGAGGACACTAGATTAAGGCGCATTATGAGGGGAAATTTCACTGACATGCTCAGAGGCAAAGTAAAGGGCCAAGACGAAACTCAGAACCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1173

Amino Acids

131.73

Weight (kDa)

5.18

Isoelectric Point (pI)

49.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1556, 3254
Acc36I ACCTGC 2 cut(s) 479, 1653
Acc65I GGTACC 1 cut(s) 3275
AccB1I GGYRCC 2 cut(s) 2546, 3275
AccI GTMKAC 3 cut(s) 1363, 2256, 2618
AccII CGCG 2 cut(s) 1431, 3099
AciI CCGC 7 cut(s) 391, 564, 1429, 1995, 2653, 2747, 2814
AcoI YGGCCR 1 cut(s) 2748
AcsI RAATTY 7 cut(s) 299, 556, 639, 1002, 1700, 3173, 3463
AcuI CTGAAG 5 cut(s) 206, 753, 758, 885, 1332
AfaI GTAC 9 cut(s) 573, 807, 1246, 1486, 1794, 3006, 3168, 3231, 3277
AfeI AGCGCT 1 cut(s) 2003
AfiI CCNNNNNNNGG 9 cut(s) 651, 841, 955, 1238, 1432, 1629, 1630, 2018, 3205
AflIII ACRYGT 2 cut(s) 2221, 2666
AjiI CACGTC 1 cut(s) 7
AjnI CCWGG 1 cut(s) 2330
AjuI GAANNNNNNNTTGG 4 cut(s) 746, 778, 809, 841
AloI GAACNNNNNNTCC 2 cut(s) 1847, 1879
Alw21I GWGCWC 7 cut(s) 84, 751, 834, 849, 1994, 2127, 2666
Alw26I GTCTC 7 cut(s) 105, 134, 412, 1213, 1276, 2491, 3278
Alw44I GTGCAC 3 cut(s) 747, 2123, 2662
AlwNI CAGNNNCTG 2 cut(s) 341, 626
Ama87I CYCGRG 1 cut(s) 1488
Aor51HI AGCGCT 1 cut(s) 2003
AoxI GGCC 5 cut(s) 120, 1368, 1709, 2748, 3496
ApaLI GTGCAC 3 cut(s) 747, 2123, 2662
ApeKI GCWGC 5 cut(s) 626, 1175, 1787, 1810, 2004
ApoI RAATTY 7 cut(s) 299, 556, 639, 1002, 1700, 3173, 3463
ArsI GACNNNNNNTTYG 4 cut(s) 1209, 1241, 1905, 1937
Asp700I GAANNNNTTC 3 cut(s) 771, 1704, 2112
Asp718I GGTACC 1 cut(s) 3275
AspLEI GCGC 4 cut(s) 588, 1470, 2004, 3450
AspS9I GGNCC 4 cut(s) 377, 425, 781, 3496
AsuC2I CCSGG 1 cut(s) 1781
AsuII TTCGAA 1 cut(s) 519
AvaI CYCGRG 1 cut(s) 1488
AvaII GGWCC 3 cut(s) 377, 425, 781
AxyI CCTNAGG 1 cut(s) 1200
BaeGI GKGCMC 4 cut(s) 751, 2127, 2551, 2666
BamHI GGATCC 2 cut(s) 2957, 3223
BanI GGYRCC 2 cut(s) 2546, 3275
BanII GRGCYC 4 cut(s) 84, 849, 1994, 2834
BarI GAAGNNNNNNTAC 2 cut(s) 3336, 3368
BauI CACGAG 1 cut(s) 89
Bbv12I GWGCWC 7 cut(s) 84, 751, 834, 849, 1994, 2127, 2666
BbvCI CCTCAGC 1 cut(s) 630
BbvI GCAGC 5 cut(s) 613, 1162, 1774, 1797, 1991
BceAI ACGGC 1 cut(s) 87
BciT130I CCWGG 1 cut(s) 2332
BclI TGATCA 4 cut(s) 934, 1092, 1162, 1449
BcnI CCSGG 1 cut(s) 1781
BcoDI GTCTC 7 cut(s) 105, 134, 412, 1213, 1276, 2491, 3278
BfaI CTAG 7 cut(s) 542, 998, 1172, 1670, 2553, 2819, 3438
BfmI CTRYAG 4 cut(s) 618, 986, 1364, 1926
BfoI RGCGCY 2 cut(s) 1471, 2005
BfuAI ACCTGC 2 cut(s) 479, 1653
BglII AGATCT 3 cut(s) 174, 451, 3266
BisI GCNGC 7 cut(s) 392, 627, 1176, 1788, 1811, 2005, 2748
BlpI GCTNAGC 1 cut(s) 1998
BlsI GCNGC 7 cut(s) 393, 628, 1177, 1789, 1812, 2006, 2749
BmcAI AGTACT 2 cut(s) 1246, 1486
Bme1390I CCNGG 2 cut(s) 1781, 2332
Bme18I GGWCC 3 cut(s) 377, 425, 781
BmeT110I CYCGRG 1 cut(s) 1488
BmgBI CACGTC 1 cut(s) 7
BmgT120I GGNCC 4 cut(s) 377, 425, 781, 3496
BmiI GGNNCC 7 cut(s) 379, 426, 427, 2548, 2959, 3225, 3277
BmrFI CCNGG 2 cut(s) 1781, 2332
BmrI ACTGGG 2 cut(s) 1618, 3365
BmuI ACTGGG 2 cut(s) 1618, 3365
BoxI GACNNNNGTC 1 cut(s) 404
BplI GAGNNNNNCTC 4 cut(s) 1471, 1503, 3162, 3194
BpmI CTGGAG 3 cut(s) 71, 1908, 2556
Bpu10I CCTNAGC 1 cut(s) 630
Bpu1102I GCTNAGC 1 cut(s) 1998
Bpu14I TTCGAA 1 cut(s) 519
BpuMI CCSGG 1 cut(s) 1781
Bsa29I ATCGAT 1 cut(s) 2781
BsaBI GATNNNNATC 1 cut(s) 933
BsaI GGTCTC 1 cut(s) 3278
BsaJI CCNNGG 2 cut(s) 825, 2477
BsaXI ACNNNNNCTCC 4 cut(s) 128, 158, 1881, 1911
Bsc4I CCNNNNNNNGG 9 cut(s) 651, 841, 955, 1238, 1432, 1629, 1630, 2018, 3205
Bse118I RCCGGY 1 cut(s) 495
Bse21I CCTNAGG 1 cut(s) 1200
Bse3DI GCAATG 4 cut(s) 513, 1805, 2635, 2973
Bse8I GATNNNNATC 1 cut(s) 933
BseBI CCWGG 1 cut(s) 2332
BseCI ATCGAT 1 cut(s) 2781
BseDI CCNNGG 2 cut(s) 825, 2477
BseGI GGATG 9 cut(s) 611, 1105, 1123, 1471, 1567, 2103, 2944, 3189, 3317
BseJI GATNNNNATC 1 cut(s) 933
BseLI CCNNNNNNNGG 9 cut(s) 651, 841, 955, 1238, 1432, 1629, 1630, 2018, 3205
BseMI GCAATG 4 cut(s) 513, 1805, 2635, 2973
BseMII CTCAG 9 cut(s) 621, 1224, 1595, 1704, 1989, 2625, 3225, 3387, 3493
BseRI GAGGAG 5 cut(s) 68, 74, 142, 647, 1448
BseSI GKGCMC 4 cut(s) 751, 2127, 2551, 2666
BseXI GCAGC 5 cut(s) 613, 1162, 1774, 1797, 1991
BseYI CCCAGC 1 cut(s) 1055
BsgI GTGCAG 2 cut(s) 1091, 3396
Bsh1236I CGCG 2 cut(s) 1431, 3099
BshFI GGCC 5 cut(s) 122, 1370, 1711, 2750, 3498
BshNI GGYRCC 2 cut(s) 2546, 3275
BshVI ATCGAT 1 cut(s) 2781
BsiHKAI GWGCWC 7 cut(s) 84, 751, 834, 849, 1994, 2127, 2666
BsiHKCI CYCGRG 1 cut(s) 1488
BsiSI CCGG 2 cut(s) 496, 1780
BslFI GGGAC 7 cut(s) 411, 921, 1907, 1956, 2131, 2232, 3385
BslI CCNNNNNNNGG 9 cut(s) 651, 841, 955, 1238, 1432, 1629, 1630, 2018, 3205
BsmAI GTCTC 7 cut(s) 105, 134, 412, 1213, 1276, 2491, 3278
BsmBI CGTCTC 2 cut(s) 105, 134
BsmFI GGGAC 7 cut(s) 411, 921, 1907, 1956, 2131, 2232, 3385
BsmI GAATGC 2 cut(s) 74, 3113
BsnI GGCC 5 cut(s) 122, 1370, 1711, 2750, 3498
Bso31I GGTCTC 1 cut(s) 3278
BsoBI CYCGRG 1 cut(s) 1488
Bsp119I TTCGAA 1 cut(s) 519
Bsp1286I GDGCHC 9 cut(s) 84, 751, 834, 849, 1994, 2127, 2551, 2666, 2834
Bsp1407I TGTACA 2 cut(s) 805, 1792
Bsp1720I GCTNAGC 1 cut(s) 1998
Bsp68I TCGCGA 1 cut(s) 3099
BspACI CCGC 7 cut(s) 391, 564, 1429, 1995, 2653, 2747, 2814
BspANI GGCC 5 cut(s) 122, 1370, 1711, 2750, 3498
BspCNI CTCAG 9 cut(s) 622, 1223, 1594, 1705, 1990, 2626, 3224, 3388, 3492
BspDI ATCGAT 1 cut(s) 2781
BspFNI CGCG 2 cut(s) 1431, 3099
BspHI TCATGA 1 cut(s) 694
BspLI GGNNCC 7 cut(s) 379, 426, 427, 2548, 2959, 3225, 3277
BspMAI CTGCAG 2 cut(s) 990, 1930
BspMI ACCTGC 2 cut(s) 479, 1653
BspT104I TTCGAA 1 cut(s) 519
BspT107I GGYRCC 2 cut(s) 2546, 3275
BspTNI GGTCTC 1 cut(s) 3278
BsrDI GCAATG 4 cut(s) 513, 1805, 2635, 2973
BsrFI RCCGGY 1 cut(s) 495
BsrGI TGTACA 2 cut(s) 805, 1792
BssAI RCCGGY 1 cut(s) 495
BssECI CCNNGG 2 cut(s) 825, 2477
BssSI CACGAG 1 cut(s) 89
BssT1I CCWWGG 2 cut(s) 825, 2477
Bst2BI CACGAG 1 cut(s) 89
Bst2UI CCWGG 1 cut(s) 2332
Bst4CI ACNGT 2 cut(s) 461, 1774
Bst6I CTCTTC 5 cut(s) 516, 777, 966, 1098, 2529
BstAPI GCANNNNNTGC 2 cut(s) 2792, 3131
BstAUI TGTACA 2 cut(s) 805, 1792
BstBI TTCGAA 1 cut(s) 519
BstEII GGTNACC 1 cut(s) 491
BstENI CCTNNNNNAGG 1 cut(s) 3203
BstF5I GGATG 9 cut(s) 611, 1105, 1123, 1471, 1567, 2103, 2944, 3189, 3317
BstFNI CGCG 2 cut(s) 1431, 3099
BstH2I RGCGCY 2 cut(s) 1471, 2005
BstHHI GCGC 4 cut(s) 588, 1470, 2004, 3450
BstMAI GTCTC 7 cut(s) 105, 134, 412, 1213, 1276, 2491, 3278
BstMWI GCNNNNNNNGC 7 cut(s) 1343, 2661, 2792, 2975, 3131, 3140, 3314
BstNI CCWGG 1 cut(s) 2332
BstNSI RCATGY 6 cut(s) 570, 1569, 2225, 2255, 2670, 3478
BstPAI GACNNNNGTC 1 cut(s) 404
BstPI GGTNACC 1 cut(s) 491
BstSCI CCNGG 2 cut(s) 1779, 2330
BstSFI CTRYAG 4 cut(s) 618, 986, 1364, 1926
BstSLI GKGCMC 4 cut(s) 751, 2127, 2551, 2666
BstUI CGCG 2 cut(s) 1431, 3099
BstV1I GCAGC 5 cut(s) 613, 1162, 1774, 1797, 1991
BstXI CCANNNNNNTGG 1 cut(s) 2980
Bsu15I ATCGAT 1 cut(s) 2781
Bsu36I CCTNAGG 1 cut(s) 1200
BsuRI GGCC 5 cut(s) 122, 1370, 1711, 2750, 3498
BsuTUI ATCGAT 1 cut(s) 2781
BtrI CACGTC 1 cut(s) 7
BtsCI GGATG 9 cut(s) 611, 1105, 1123, 1471, 1567, 2103, 2944, 3189, 3317
BtsI GCAGTG 4 cut(s) 870, 983, 3380, 3416
BtuMI TCGCGA 1 cut(s) 3099
BveI ACCTGC 2 cut(s) 479, 1653
CaiI CAGNNNCTG 2 cut(s) 341, 626
CciI TCATGA 1 cut(s) 694
CfoI GCGC 4 cut(s) 588, 1470, 2004, 3450
Cfr10I RCCGGY 1 cut(s) 495
Cfr13I GGNCC 4 cut(s) 377, 425, 781, 3496
ClaI ATCGAT 1 cut(s) 2781
CseI GACGC 2 cut(s) 1558, 3080
CsiI ACCWGGT 1 cut(s) 2330
Csp6I GTAC 9 cut(s) 572, 806, 1245, 1485, 1793, 3005, 3167, 3230, 3276
CspCI CAANNNNNGTGG 4 cut(s) 913, 948, 1131, 1166
CviQI GTAC 9 cut(s) 572, 806, 1245, 1485, 1793, 3005, 3167, 3230, 3276
DraI TTTAAA 1 cut(s) 2899
EaeI YGGCCR 1 cut(s) 2748
Eam1104I CTCTTC 5 cut(s) 516, 777, 966, 1098, 2529
EarI CTCTTC 5 cut(s) 516, 777, 966, 1098, 2529
Ecl136II GAGCTC 3 cut(s) 82, 847, 1992
Eco130I CCWWGG 2 cut(s) 825, 2477
Eco24I GRGCYC 4 cut(s) 84, 849, 1994, 2834
Eco31I GGTCTC 1 cut(s) 3278
Eco47I GGWCC 3 cut(s) 377, 425, 781
Eco47III AGCGCT 1 cut(s) 2003
Eco53kI GAGCTC 3 cut(s) 82, 847, 1992
Eco57I CTGAAG 5 cut(s) 206, 753, 758, 885, 1332
Eco81I CCTNAGG 1 cut(s) 1200
Eco88I CYCGRG 1 cut(s) 1488
Eco91I GGTNACC 1 cut(s) 491
EcoICRI GAGCTC 3 cut(s) 82, 847, 1992
EcoNI CCTNNNNNAGG 1 cut(s) 3203
EcoO109I RGGNCCY 2 cut(s) 425, 781
EcoO65I GGTNACC 1 cut(s) 491
EcoRI GAATTC 2 cut(s) 556, 3173
EcoRII CCWGG 1 cut(s) 2330
EcoT14I CCWWGG 2 cut(s) 825, 2477
EcoT22I ATGCAT 3 cut(s) 1567, 2992, 3115
EcoT38I GRGCYC 4 cut(s) 84, 849, 1994, 2834
ErhI CCWWGG 2 cut(s) 825, 2477
Esp3I CGTCTC 2 cut(s) 105, 134
FaqI GGGAC 7 cut(s) 411, 921, 1907, 1956, 2131, 2232, 3385
FauI CCCGC 2 cut(s) 571, 2821
FbaI TGATCA 4 cut(s) 934, 1092, 1162, 1449
FblI GTMKAC 3 cut(s) 1363, 2256, 2618
Fnu4HI GCNGC 7 cut(s) 392, 627, 1176, 1788, 1811, 2005, 2748
FokI GGATG 9 cut(s) 598, 1110, 1112, 1458, 1574, 2110, 2951, 3176, 3304
FriOI GRGCYC 4 cut(s) 84, 849, 1994, 2834
Fsp4HI GCNGC 7 cut(s) 392, 627, 1176, 1788, 1811, 2005, 2748
FspBI CTAG 7 cut(s) 542, 998, 1172, 1670, 2553, 2819, 3438
GlaI GCGC 4 cut(s) 587, 1469, 2003, 3449
GluI GCNGC 7 cut(s) 392, 627, 1176, 1788, 1811, 2005, 2748
GsaI CCCAGC 1 cut(s) 1059
GsuI CTGGAG 3 cut(s) 71, 1908, 2556
HaeII RGCGCY 2 cut(s) 1471, 2005
HaeIII GGCC 5 cut(s) 122, 1370, 1711, 2750, 3498
HapII CCGG 2 cut(s) 496, 1780
HgaI GACGC 2 cut(s) 1558, 3080
HhaI GCGC 4 cut(s) 588, 1470, 2004, 3450
Hin6I GCGC 4 cut(s) 586, 1468, 2002, 3448
HinP1I GCGC 4 cut(s) 586, 1468, 2002, 3448
HincII GTYRAC 1 cut(s) 2257
HindII GTYRAC 1 cut(s) 2257
HpaII CCGG 2 cut(s) 496, 1780
Hpy99I CGWCG 4 cut(s) 104, 450, 3096, 3099
HpyCH4III ACNGT 2 cut(s) 461, 1774
HpyCH4IV ACGT 4 cut(s) 6, 445, 512, 1528
HpyF10VI GCNNNNNNNGC 7 cut(s) 1343, 2661, 2792, 2975, 3131, 3140, 3314
HpySE526I ACGT 4 cut(s) 6, 445, 512, 1528
HspAI GCGC 4 cut(s) 586, 1468, 2002, 3448
KflI GGGWCCC 1 cut(s) 425
KpnI GGTACC 1 cut(s) 3279
Ksp22I TGATCA 4 cut(s) 934, 1092, 1162, 1449
Lsp1109I GCAGC 5 cut(s) 613, 1162, 1774, 1797, 1991
MabI ACCWGGT 1 cut(s) 2330
MaeI CTAG 7 cut(s) 542, 998, 1172, 1670, 2553, 2819, 3438
MaeII ACGT 4 cut(s) 6, 445, 512, 1528
MaeIII GTNAC 7 cut(s) 337, 491, 526, 868, 1308, 2821, 3080
MfeI CAATTG 3 cut(s) 28, 1868, 2228
MhlI GDGCHC 9 cut(s) 84, 751, 834, 849, 1994, 2127, 2551, 2666, 2834
MlyI GAGTC 7 cut(s) 143, 362, 671, 1073, 2048, 3203, 3407
MmeI TCCRAC 2 cut(s) 171, 2748
Mph1103I ATGCAT 3 cut(s) 1567, 2992, 3115
MroXI GAANNNNTTC 3 cut(s) 771, 1704, 2112
MslI CAYNNNNRTG 6 cut(s) 565, 1650, 2049, 2732, 2978, 3473
MspA1I CMGCKG 3 cut(s) 391, 1997, 3395
MspI CCGG 2 cut(s) 496, 1780
MspR9I CCNGG 2 cut(s) 1781, 2332
MunI CAATTG 3 cut(s) 28, 1868, 2228
Mva1269I GAATGC 2 cut(s) 74, 3113
MvaI CCWGG 1 cut(s) 2332
MvnI CGCG 2 cut(s) 1431, 3099
MwoI GCNNNNNNNGC 7 cut(s) 1343, 2661, 2792, 2975, 3131, 3140, 3314
NciI CCSGG 1 cut(s) 1781
NlaIV GGNNCC 7 cut(s) 379, 426, 427, 2548, 2959, 3225, 3277
NmuCI GTSAC 3 cut(s) 526, 868, 3080
NruI TCGCGA 1 cut(s) 3099
NsiI ATGCAT 3 cut(s) 1567, 2992, 3115
NspI RCATGY 6 cut(s) 570, 1569, 2225, 2255, 2670, 3478
NspV TTCGAA 1 cut(s) 519
PaeI GCATGC 1 cut(s) 1569
PaeR7I CTCGAG 1 cut(s) 1488
PagI TCATGA 1 cut(s) 694
PciI ACATGT 2 cut(s) 2221, 2666
PcsI WCGNNNNNNNCGW 2 cut(s) 96, 907
PctI GAATGC 2 cut(s) 74, 3113
PdmI GAANNNNTTC 3 cut(s) 771, 1704, 2112
PfeI GAWTC 9 cut(s) 329, 538, 767, 1493, 1724, 1763, 1901, 2325, 2366
PfoI TCCNGGA 1 cut(s) 1779
PkrI GCNGC 7 cut(s) 393, 628, 1177, 1789, 1812, 2006, 2749
PleI GAGTC 7 cut(s) 143, 361, 670, 1072, 2047, 3203, 3406
PpsI GAGTC 7 cut(s) 143, 361, 670, 1072, 2047, 3203, 3406
PpuMI RGGWCCY 2 cut(s) 425, 781
PscI ACATGT 2 cut(s) 2221, 2666
PshAI GACNNNNGTC 1 cut(s) 404
PsiI TTATAA 2 cut(s) 1556, 3254
Psp124BI GAGCTC 3 cut(s) 84, 849, 1994
Psp5II RGGWCCY 2 cut(s) 425, 781
Psp6I CCWGG 1 cut(s) 2330
PspEI GGTNACC 1 cut(s) 491
PspFI CCCAGC 1 cut(s) 1055
PspGI CCWGG 1 cut(s) 2330
PspN4I GGNNCC 7 cut(s) 379, 426, 427, 2548, 2959, 3225, 3277
PspPI GGNCC 4 cut(s) 377, 425, 781, 3496
PspPPI RGGWCCY 2 cut(s) 425, 781
PstI CTGCAG 2 cut(s) 990, 1930
PstNI CAGNNNCTG 2 cut(s) 341, 626
PvuII CAGCTG 1 cut(s) 3395
RruI TCGCGA 1 cut(s) 3099
RsaI GTAC 9 cut(s) 573, 807, 1246, 1486, 1794, 3006, 3168, 3231, 3277
RsaNI GTAC 9 cut(s) 572, 806, 1245, 1485, 1793, 3005, 3167, 3230, 3276
RseI CAYNNNNRTG 6 cut(s) 565, 1650, 2049, 2732, 2978, 3473
SacI GAGCTC 3 cut(s) 84, 849, 1994
SalI GTCGAC 1 cut(s) 2255
SatI GCNGC 7 cut(s) 392, 627, 1176, 1788, 1811, 2005, 2748
Sau96I GGNCC 4 cut(s) 377, 425, 781, 3496
ScaI AGTACT 2 cut(s) 1246, 1486
SchI GAGTC 7 cut(s) 143, 362, 671, 1073, 2048, 3203, 3407
ScrFI CCNGG 2 cut(s) 1781, 2332
SduI GDGCHC 9 cut(s) 84, 751, 834, 849, 1994, 2127, 2551, 2666, 2834
SexAI ACCWGGT 1 cut(s) 2330
SfcI CTRYAG 4 cut(s) 618, 986, 1364, 1926
Sfr274I CTCGAG 1 cut(s) 1488
SfuI TTCGAA 1 cut(s) 519
SinI GGWCC 3 cut(s) 377, 425, 781
SlaI CTCGAG 1 cut(s) 1488
SmiMI CAYNNNNRTG 6 cut(s) 565, 1650, 2049, 2732, 2978, 3473
SmlI CTYRAG 1 cut(s) 1488
SmoI CTYRAG 1 cut(s) 1488
SphI GCATGC 1 cut(s) 1569
SsiI CCGC 7 cut(s) 391, 564, 1429, 1995, 2653, 2747, 2814
SspI AATATT 4 cut(s) 476, 1220, 1841, 2184
SspMI CTAG 7 cut(s) 542, 998, 1172, 1670, 2553, 2819, 3438
SstI GAGCTC 3 cut(s) 84, 849, 1994
StyD4I CCNGG 2 cut(s) 1779, 2330
StyI CCWWGG 2 cut(s) 825, 2477
TaaI ACNGT 2 cut(s) 461, 1774
TaiI ACGT 4 cut(s) 9, 448, 515, 1531
TaqI TCGA 9 cut(s) 78, 99, 448, 519, 1489, 2256, 2323, 2781, 2916
TatI WGTACW 5 cut(s) 805, 1244, 1484, 1792, 3229
TauI GCSGC 2 cut(s) 394, 2750
TfiI GAWTC 9 cut(s) 329, 538, 767, 1493, 1724, 1763, 1901, 2325, 2366
TseFI GTSAC 3 cut(s) 526, 868, 3080
TseI GCWGC 5 cut(s) 626, 1175, 1787, 1810, 2004
Tsp45I GTSAC 3 cut(s) 526, 868, 3080
TspGWI ACGGA 6 cut(s) 390, 1057, 1709, 2110, 3032, 3119
VneI GTGCAC 3 cut(s) 747, 2123, 2662
VpaK11BI GGWCC 3 cut(s) 377, 425, 781
XagI CCTNNNNNAGG 1 cut(s) 3203
XapI RAATTY 7 cut(s) 299, 556, 639, 1002, 1700, 3173, 3463
XbaI TCTAGA 1 cut(s) 541
XceI RCATGY 6 cut(s) 570, 1569, 2225, 2255, 2670, 3478
XcmI CCANNNNNNNNNTGG 1 cut(s) 2338
XhoI CTCGAG 1 cut(s) 1488
XmiI GTMKAC 3 cut(s) 1363, 2256, 2618
XmnI GAANNNNTTC 3 cut(s) 771, 1704, 2112
XspI CTAG 7 cut(s) 542, 998, 1172, 1670, 2553, 2819, 3438
ZrmI AGTACT 2 cut(s) 1246, 1486
Zsp2I ATGCAT 3 cut(s) 1567, 2992, 3115
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.