LisH domain and HEAT repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G16210 |
| fragaria_vesca | FvH4_7g07990 FvH4_7g07990 FvH4_7g07990 FvH4_7g07990 FvH4_7g07990 FvH4_7g07990 FvH4_7g07990 |
| malus_domestica | MD09G1255900.v1.1 MD17G1249200.v1.1 MD17G1249700.v1.1 MD17G1249900.v1.1 |
| prunus_persica | Prupe.3G148000_v2.0.a1 Prupe.3G148000_v2.0.a1 Prupe.3G148000_v2.0.a1 Prupe.3G148000_v2.0.a1 |
| pyrus_communis | pycom09g17170 pycom09g17180 pycom17g25370 |
| rosa_chinensis | RchiOBHm_Chr3g0494111 RchiOBHm_Chr3g0494121 |
| rosa_laevigata | RLG00000022677 |
| rosa_multiflora | Rmu_sc0010318.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00243540 Rroxscaffold_6G00391260 |
| rosa_rugosa | Rorug03G0264300 Rorug03G0264400 |
| rosa_samantha | Rh3AG314100 Rh3BG349900 Rh3CG346800 Rh3DG349300 |
| rosa_wichuraiana | Rw3G027460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1586, 3284 |
| AarI | CACCTGC | 1 cut(s) | 589 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2644 |
| Acc16I | TGCGCA | 1 cut(s) | 1089 |
| Acc36I | ACCTGC | 1 cut(s) | 589 |
| Acc65I | GGTACC | 1 cut(s) | 510 |
| AccB1I | GGYRCC | 2 cut(s) | 510, 2576 |
| AccI | GTMKAC | 2 cut(s) | 2286, 2648 |
| AciI | CCGC | 4 cut(s) | 409, 1139, 1332, 3101 |
| AclWI | GGATC | 7 cut(s) | 200, 1365, 1402, 1904, 2995, 3248, 3261 |
| AcsI | RAATTY | 5 cut(s) | 40, 370, 829, 1236, 1730 |
| AcuI | CTGAAG | 3 cut(s) | 323, 771, 966 |
| AfaI | GTAC | 8 cut(s) | 512, 766, 825, 1279, 2156, 2609, 3036, 3198 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 859, 973, 1328, 1335, 1386, 1462, 1659, 1660, 2048 |
| AflII | CTTAAG | 1 cut(s) | 1940 |
| AflIII | ACRYGT | 2 cut(s) | 955, 2956 |
| AhlI | ACTAGT | 1 cut(s) | 3359 |
| AjiI | CACGTC | 1 cut(s) | 7 |
| AjnI | CCWGG | 3 cut(s) | 117, 843, 2430 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1877, 1909 |
| Alw21I | GWGCWC | 3 cut(s) | 852, 867, 3166 |
| Alw26I | GTCTC | 7 cut(s) | 105, 695, 1306, 1391, 2497, 2521, 3231 |
| AlwI | GGATC | 7 cut(s) | 200, 1365, 1402, 1904, 2995, 3248, 3261 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 644, 844 |
| Ama87I | CYCGRG | 1 cut(s) | 1518 |
| AoxI | GGCC | 4 cut(s) | 120, 1390, 1739, 2916 |
| ApoI | RAATTY | 5 cut(s) | 40, 370, 829, 1236, 1730 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1375, 1647, 2142, 3156 |
| Asp718I | GGTACC | 1 cut(s) | 510 |
| AspLEI | GCGC | 7 cut(s) | 606, 1090, 1500, 1692, 3123, 3250, 3480 |
| AspS9I | GGNCC | 5 cut(s) | 395, 443, 1390, 2061, 2917 |
| AsuC2I | CCSGG | 1 cut(s) | 1811 |
| AsuHPI | GGTGA | 4 cut(s) | 324, 570, 2102, 3340 |
| AvaI | CYCGRG | 1 cut(s) | 1518 |
| AvaII | GGWCC | 3 cut(s) | 395, 443, 2061 |
| AxyI | CCTNAGG | 1 cut(s) | 1230 |
| BaeGI | GKGCMC | 2 cut(s) | 2180, 2581 |
| BamHI | GGATCC | 1 cut(s) | 3253 |
| BanI | GGYRCC | 2 cut(s) | 510, 2576 |
| BanII | GRGCYC | 2 cut(s) | 867, 2864 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3366, 3398 |
| BbsI | GAAGAC | 2 cut(s) | 311, 3468 |
| Bbv12I | GWGCWC | 3 cut(s) | 852, 867, 3166 |
| BbvCI | CCTCAGC | 1 cut(s) | 648 |
| BccI | CCATC | 8 cut(s) | 98, 1003, 1330, 1464, 1509, 2479, 2978, 3325 |
| BceAI | ACGGC | 3 cut(s) | 87, 2529, 3108 |
| BciT130I | CCWGG | 3 cut(s) | 119, 845, 2432 |
| BclI | TGATCA | 3 cut(s) | 1183, 1449, 1479 |
| BcnI | CCSGG | 1 cut(s) | 1811 |
| BcoDI | GTCTC | 7 cut(s) | 105, 695, 1306, 1391, 2497, 2521, 3231 |
| BcuI | ACTAGT | 1 cut(s) | 3359 |
| BfaI | CTAG | 9 cut(s) | 221, 560, 1016, 1394, 1700, 2583, 2849, 3360, 3468 |
| BfmI | CTRYAG | 4 cut(s) | 636, 791, 1004, 1956 |
| BfoI | RGCGCY | 1 cut(s) | 1501 |
| BfrI | CTTAAG | 1 cut(s) | 1940 |
| BfuAI | ACCTGC | 1 cut(s) | 589 |
| BglII | AGATCT | 3 cut(s) | 174, 469, 3296 |
| BlpI | GCTNAGC | 1 cut(s) | 2028 |
| Bme1390I | CCNGG | 4 cut(s) | 119, 845, 1811, 2432 |
| Bme18I | GGWCC | 3 cut(s) | 395, 443, 2061 |
| BmeT110I | CYCGRG | 1 cut(s) | 1518 |
| BmgBI | CACGTC | 1 cut(s) | 7 |
| BmgT120I | GGNCC | 5 cut(s) | 395, 443, 1390, 2061, 2917 |
| BmiI | GGNNCC | 7 cut(s) | 444, 512, 1260, 1391, 2062, 2578, 3255 |
| BmrFI | CCNGG | 4 cut(s) | 119, 845, 1811, 2432 |
| BmrI | ACTGGG | 4 cut(s) | 1648, 2214, 2451, 3395 |
| BmuI | ACTGGG | 4 cut(s) | 1648, 2214, 2451, 3395 |
| BpiI | GAAGAC | 2 cut(s) | 311, 3468 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1989, 2021 |
| BpmI | CTGGAG | 4 cut(s) | 71, 866, 1938, 2586 |
| Bpu10I | CCTNAGC | 1 cut(s) | 648 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2028 |
| BpuEI | CTTGAG | 1 cut(s) | 116 |
| BpuMI | CCSGG | 1 cut(s) | 1811 |
| Bsa29I | ATCGAT | 1 cut(s) | 2811 |
| BsaAI | YACGTR | 1 cut(s) | 2957 |
| BsaI | GGTCTC | 2 cut(s) | 1391, 2497 |
| BsaJI | CCNNGG | 4 cut(s) | 843, 972, 1281, 2064 |
| BsaXI | ACNNNNNCTCC | 5 cut(s) | 32, 1911, 1941, 3082, 3112 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 859, 973, 1328, 1335, 1386, 1462, 1659, 1660, 2048 |
| Bse118I | RCCGGY | 1 cut(s) | 513 |
| Bse1I | ACTGG | 9 cut(s) | 375, 1145, 1654, 2209, 2446, 2535, 3390, 3422, 3455 |
| Bse21I | CCTNAGG | 1 cut(s) | 1230 |
| Bse3DI | GCAATG | 4 cut(s) | 531, 1835, 2665, 3003 |
| BseBI | CCWGG | 3 cut(s) | 119, 845, 2432 |
| BseCI | ATCGAT | 1 cut(s) | 2811 |
| BseDI | CCNNGG | 4 cut(s) | 843, 972, 1281, 2064 |
| BseGI | GGATG | 9 cut(s) | 1123, 1141, 1325, 1501, 1597, 2133, 2452, 2974, 3175 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 859, 973, 1328, 1335, 1386, 1462, 1659, 1660, 2048 |
| BseMI | GCAATG | 4 cut(s) | 531, 1835, 2665, 3003 |
| BseMII | CTCAG | 8 cut(s) | 639, 1065, 1734, 2042, 2445, 2655, 2867, 3523 |
| BseNI | ACTGG | 9 cut(s) | 375, 1145, 1654, 2209, 2446, 2535, 3390, 3422, 3455 |
| BseRI | GAGGAG | 5 cut(s) | 68, 554, 665, 1478, 1700 |
| BseSI | GKGCMC | 2 cut(s) | 2180, 2581 |
| BseYI | CCCAGC | 1 cut(s) | 3338 |
| BsgI | GTGCAG | 3 cut(s) | 1806, 3243, 3426 |
| BshFI | GGCC | 4 cut(s) | 122, 1392, 1741, 2918 |
| BshNI | GGYRCC | 2 cut(s) | 510, 2576 |
| BshVI | ATCGAT | 1 cut(s) | 2811 |
| BsiHKAI | GWGCWC | 3 cut(s) | 852, 867, 3166 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1518 |
| BsiSI | CCGG | 4 cut(s) | 514, 1329, 1738, 1810 |
| BslFI | GGGAC | 3 cut(s) | 826, 2221, 2262 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 859, 973, 1328, 1335, 1386, 1462, 1659, 1660, 2048 |
| BsmAI | GTCTC | 7 cut(s) | 105, 695, 1306, 1391, 2497, 2521, 3231 |
| BsmBI | CGTCTC | 1 cut(s) | 1306 |
| BsmFI | GGGAC | 3 cut(s) | 826, 2221, 2262 |
| BsnI | GGCC | 4 cut(s) | 122, 1392, 1741, 2918 |
| Bso31I | GGTCTC | 2 cut(s) | 1391, 2497 |
| BsoBI | CYCGRG | 1 cut(s) | 1518 |
| Bsp1286I | GDGCHC | 6 cut(s) | 852, 867, 2180, 2581, 2864, 3166 |
| Bsp1407I | TGTACA | 1 cut(s) | 823 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2028 |
| BspACI | CCGC | 4 cut(s) | 409, 1139, 1332, 3101 |
| BspANI | GGCC | 4 cut(s) | 122, 1392, 1741, 2918 |
| BspCNI | CTCAG | 8 cut(s) | 640, 1066, 1735, 2041, 2446, 2656, 2868, 3522 |
| BspDI | ATCGAT | 1 cut(s) | 2811 |
| BspHI | TCATGA | 1 cut(s) | 712 |
| BspLI | GGNNCC | 7 cut(s) | 444, 512, 1260, 1391, 2062, 2578, 3255 |
| BspMAI | CTGCAG | 3 cut(s) | 795, 1008, 1960 |
| BspMI | ACCTGC | 1 cut(s) | 589 |
| BspPI | GGATC | 7 cut(s) | 200, 1365, 1402, 1904, 2995, 3248, 3261 |
| BspT107I | GGYRCC | 2 cut(s) | 510, 2576 |
| BspTI | CTTAAG | 1 cut(s) | 1940 |
| BspTNI | GGTCTC | 2 cut(s) | 1391, 2497 |
| BsrDI | GCAATG | 4 cut(s) | 531, 1835, 2665, 3003 |
| BsrFI | RCCGGY | 1 cut(s) | 513 |
| BsrGI | TGTACA | 1 cut(s) | 823 |
| BsrI | ACTGG | 9 cut(s) | 375, 1145, 1654, 2209, 2446, 2535, 3390, 3422, 3455 |
| BssAI | RCCGGY | 1 cut(s) | 513 |
| BssECI | CCNNGG | 4 cut(s) | 843, 972, 1281, 2064 |
| BssT1I | CCWWGG | 2 cut(s) | 972, 1281 |
| Bst2UI | CCWGG | 3 cut(s) | 119, 845, 2432 |
| Bst4CI | ACNGT | 4 cut(s) | 479, 937, 1804, 2291 |
| Bst6I | CTCTTC | 3 cut(s) | 157, 219, 2559 |
| BstAFI | CTTAAG | 1 cut(s) | 1940 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 2822, 3161 |
| BstAUI | TGTACA | 1 cut(s) | 823 |
| BstBAI | YACGTR | 1 cut(s) | 2957 |
| BstDSI | CCRYGG | 1 cut(s) | 2064 |
| BstF5I | GGATG | 9 cut(s) | 1123, 1141, 1325, 1501, 1597, 2133, 2452, 2974, 3175 |
| BstH2I | RGCGCY | 1 cut(s) | 1501 |
| BstHHI | GCGC | 7 cut(s) | 606, 1090, 1500, 1692, 3123, 3250, 3480 |
| BstMAI | GTCTC | 7 cut(s) | 105, 695, 1306, 1391, 2497, 2521, 3231 |
| BstNI | CCWGG | 3 cut(s) | 119, 845, 2432 |
| BstNSI | RCATGY | 6 cut(s) | 588, 959, 1599, 2255, 2285, 3508 |
| BstSCI | CCNGG | 4 cut(s) | 117, 843, 1809, 2430 |
| BstSFI | CTRYAG | 4 cut(s) | 636, 791, 1004, 1956 |
| BstSLI | GKGCMC | 2 cut(s) | 2180, 2581 |
| BstV2I | GAAGAC | 2 cut(s) | 311, 3468 |
| BstX2I | RGATCY | 7 cut(s) | 174, 205, 469, 1357, 1407, 3253, 3296 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3010 |
| BstYI | RGATCY | 7 cut(s) | 174, 205, 469, 1357, 1407, 3253, 3296 |
| Bsu15I | ATCGAT | 1 cut(s) | 2811 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1230 |
| BsuRI | GGCC | 4 cut(s) | 122, 1392, 1741, 2918 |
| BsuTUI | ATCGAT | 1 cut(s) | 2811 |
| BtgI | CCRYGG | 1 cut(s) | 2064 |
| BtrI | CACGTC | 1 cut(s) | 7 |
| BtsCI | GGATG | 9 cut(s) | 1123, 1141, 1325, 1501, 1597, 2133, 2452, 2974, 3175 |
| BtsI | GCAGTG | 2 cut(s) | 888, 1001 |
| BtsIMutI | CAGTG | 6 cut(s) | 382, 888, 1001, 1661, 2439, 3498 |
| BveI | ACCTGC | 1 cut(s) | 589 |
| CaiI | CAGNNNCTG | 2 cut(s) | 644, 844 |
| CciI | TCATGA | 1 cut(s) | 712 |
| CfoI | GCGC | 7 cut(s) | 606, 1090, 1500, 1692, 3123, 3250, 3480 |
| Cfr10I | RCCGGY | 1 cut(s) | 513 |
| Cfr13I | GGNCC | 5 cut(s) | 395, 443, 1390, 2061, 2917 |
| ClaI | ATCGAT | 1 cut(s) | 2811 |
| CseI | GACGC | 2 cut(s) | 1288, 2459 |
| Csp6I | GTAC | 8 cut(s) | 511, 765, 824, 1278, 2155, 2608, 3035, 3197 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1149, 1184 |
| CviQI | GTAC | 8 cut(s) | 511, 765, 824, 1278, 2155, 2608, 3035, 3197 |
| DraI | TTTAAA | 2 cut(s) | 1026, 2929 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2644 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2644 |
| Eam1104I | CTCTTC | 3 cut(s) | 157, 219, 2559 |
| EarI | CTCTTC | 3 cut(s) | 157, 219, 2559 |
| EciI | GGCGGA | 2 cut(s) | 1347, 3090 |
| Ecl136II | GAGCTC | 1 cut(s) | 865 |
| Eco130I | CCWWGG | 2 cut(s) | 972, 1281 |
| Eco24I | GRGCYC | 2 cut(s) | 867, 2864 |
| Eco31I | GGTCTC | 2 cut(s) | 1391, 2497 |
| Eco32I | GATATC | 1 cut(s) | 917 |
| Eco47I | GGWCC | 3 cut(s) | 395, 443, 2061 |
| Eco53kI | GAGCTC | 1 cut(s) | 865 |
| Eco57I | CTGAAG | 3 cut(s) | 323, 771, 966 |
| Eco81I | CCTNAGG | 1 cut(s) | 1230 |
| Eco88I | CYCGRG | 1 cut(s) | 1518 |
| EcoICRI | GAGCTC | 1 cut(s) | 865 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1390 |
| EcoRII | CCWGG | 3 cut(s) | 117, 843, 2430 |
| EcoRV | GATATC | 1 cut(s) | 917 |
| EcoT14I | CCWWGG | 2 cut(s) | 972, 1281 |
| EcoT22I | ATGCAT | 3 cut(s) | 906, 1597, 3145 |
| EcoT38I | GRGCYC | 2 cut(s) | 867, 2864 |
| ErhI | CCWWGG | 2 cut(s) | 972, 1281 |
| Esp3I | CGTCTC | 1 cut(s) | 1306 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 125, 157, 710, 742, 804, 836, 3051, 3083 |
| FaqI | GGGAC | 3 cut(s) | 826, 2221, 2262 |
| FauI | CCCGC | 1 cut(s) | 1146 |
| FauNDI | CATATG | 1 cut(s) | 1677 |
| FbaI | TGATCA | 3 cut(s) | 1183, 1449, 1479 |
| FblI | GTMKAC | 2 cut(s) | 2286, 2648 |
| FokI | GGATG | 9 cut(s) | 1128, 1130, 1312, 1488, 1604, 2140, 2459, 2981, 3182 |
| FriOI | GRGCYC | 2 cut(s) | 867, 2864 |
| FspBI | CTAG | 9 cut(s) | 221, 560, 1016, 1394, 1700, 2583, 2849, 3360, 3468 |
| FspI | TGCGCA | 1 cut(s) | 1089 |
| GlaI | GCGC | 7 cut(s) | 605, 1089, 1499, 1691, 3122, 3249, 3479 |
| GsaI | CCCAGC | 1 cut(s) | 3342 |
| GsuI | CTGGAG | 4 cut(s) | 71, 866, 1938, 2586 |
| HaeII | RGCGCY | 1 cut(s) | 1501 |
| HaeIII | GGCC | 4 cut(s) | 122, 1392, 1741, 2918 |
| HapII | CCGG | 4 cut(s) | 514, 1329, 1738, 1810 |
| HgaI | GACGC | 2 cut(s) | 1288, 2459 |
| HhaI | GCGC | 7 cut(s) | 606, 1090, 1500, 1692, 3123, 3250, 3480 |
| Hin6I | GCGC | 7 cut(s) | 604, 1088, 1498, 1690, 3121, 3248, 3478 |
| HinP1I | GCGC | 7 cut(s) | 604, 1088, 1498, 1690, 3121, 3248, 3478 |
| HincII | GTYRAC | 2 cut(s) | 2287, 2460 |
| HindII | GTYRAC | 2 cut(s) | 2287, 2460 |
| HpaII | CCGG | 4 cut(s) | 514, 1329, 1738, 1810 |
| HphI | GGTGA | 4 cut(s) | 324, 570, 2102, 3340 |
| Hpy99I | CGWCG | 3 cut(s) | 22, 104, 3129 |
| HpyCH4III | ACNGT | 4 cut(s) | 479, 937, 1804, 2291 |
| HpyCH4IV | ACGT | 6 cut(s) | 6, 530, 801, 1349, 1558, 2956 |
| HpySE526I | ACGT | 6 cut(s) | 6, 530, 801, 1349, 1558, 2956 |
| HspAI | GCGC | 7 cut(s) | 604, 1088, 1498, 1690, 3121, 3248, 3478 |
| KpnI | GGTACC | 1 cut(s) | 514 |
| Ksp22I | TGATCA | 3 cut(s) | 1183, 1449, 1479 |
| LmnI | GCTCC | 9 cut(s) | 90, 847, 862, 1051, 1264, 1465, 1687, 2756, 2909 |
| MaeI | CTAG | 9 cut(s) | 221, 560, 1016, 1394, 1700, 2583, 2849, 3360, 3468 |
| MaeII | ACGT | 6 cut(s) | 6, 530, 801, 1349, 1558, 2956 |
| MfeI | CAATTG | 5 cut(s) | 28, 1898, 2166, 2181, 2258 |
| MflI | RGATCY | 7 cut(s) | 174, 205, 469, 1357, 1407, 3253, 3296 |
| MhlI | GDGCHC | 6 cut(s) | 852, 867, 2180, 2581, 2864, 3166 |
| MlyI | GAGTC | 5 cut(s) | 123, 143, 569, 1091, 2078 |
| Mph1103I | ATGCAT | 3 cut(s) | 906, 1597, 3145 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1375, 1647, 2142, 3156 |
| MslI | CAYNNNNRTG | 7 cut(s) | 583, 1487, 1680, 2079, 2272, 3008, 3503 |
| MspA1I | CMGCKG | 1 cut(s) | 409 |
| MspCI | CTTAAG | 1 cut(s) | 1940 |
| MspI | CCGG | 4 cut(s) | 514, 1329, 1738, 1810 |
| MspR9I | CCNGG | 4 cut(s) | 119, 845, 1811, 2432 |
| MunI | CAATTG | 5 cut(s) | 28, 1898, 2166, 2181, 2258 |
| MvaI | CCWGG | 3 cut(s) | 119, 845, 2432 |
| NciI | CCSGG | 1 cut(s) | 1811 |
| NdeI | CATATG | 1 cut(s) | 1677 |
| NlaIV | GGNNCC | 7 cut(s) | 444, 512, 1260, 1391, 2062, 2578, 3255 |
| NmuCI | GTSAC | 5 cut(s) | 544, 2070, 2635, 3110, 3355 |
| NsbI | TGCGCA | 1 cut(s) | 1089 |
| NsiI | ATGCAT | 3 cut(s) | 906, 1597, 3145 |
| NspI | RCATGY | 6 cut(s) | 588, 959, 1599, 2255, 2285, 3508 |
| PaeI | GCATGC | 1 cut(s) | 588 |
| PaeR7I | CTCGAG | 1 cut(s) | 1518 |
| PagI | TCATGA | 1 cut(s) | 712 |
| PaqCI | CACCTGC | 1 cut(s) | 589 |
| PciI | ACATGT | 1 cut(s) | 955 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1375, 1647, 2142, 3156 |
| PfoI | TCCNGGA | 1 cut(s) | 1809 |
| PleI | GAGTC | 5 cut(s) | 123, 143, 569, 1090, 2077 |
| PpsI | GAGTC | 5 cut(s) | 123, 143, 569, 1090, 2077 |
| Ppu21I | YACGTR | 1 cut(s) | 2957 |
| PscI | ACATGT | 1 cut(s) | 955 |
| PsiI | TTATAA | 2 cut(s) | 1586, 3284 |
| Psp124BI | GAGCTC | 1 cut(s) | 867 |
| Psp6I | CCWGG | 3 cut(s) | 117, 843, 2430 |
| PspFI | CCCAGC | 1 cut(s) | 3338 |
| PspGI | CCWGG | 3 cut(s) | 117, 843, 2430 |
| PspN4I | GGNNCC | 7 cut(s) | 444, 512, 1260, 1391, 2062, 2578, 3255 |
| PspPI | GGNCC | 5 cut(s) | 395, 443, 1390, 2061, 2917 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3298, 3330 |
| PstI | CTGCAG | 3 cut(s) | 795, 1008, 1960 |
| PstNI | CAGNNNCTG | 2 cut(s) | 644, 844 |
| PsuI | RGATCY | 7 cut(s) | 174, 205, 469, 1357, 1407, 3253, 3296 |
| RsaI | GTAC | 8 cut(s) | 512, 766, 825, 1279, 2156, 2609, 3036, 3198 |
| RsaNI | GTAC | 8 cut(s) | 511, 765, 824, 1278, 2155, 2608, 3035, 3197 |
| RseI | CAYNNNNRTG | 7 cut(s) | 583, 1487, 1680, 2079, 2272, 3008, 3503 |
| SacI | GAGCTC | 1 cut(s) | 867 |
| SalI | GTCGAC | 1 cut(s) | 2285 |
| Sau96I | GGNCC | 5 cut(s) | 395, 443, 1390, 2061, 2917 |
| SchI | GAGTC | 5 cut(s) | 123, 143, 569, 1091, 2078 |
| ScrFI | CCNGG | 4 cut(s) | 119, 845, 1811, 2432 |
| SduI | GDGCHC | 6 cut(s) | 852, 867, 2180, 2581, 2864, 3166 |
| SfcI | CTRYAG | 4 cut(s) | 636, 791, 1004, 1956 |
| Sfr274I | CTCGAG | 1 cut(s) | 1518 |
| SinI | GGWCC | 3 cut(s) | 395, 443, 2061 |
| SlaI | CTCGAG | 1 cut(s) | 1518 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 583, 1487, 1680, 2079, 2272, 3008, 3503 |
| SmlI | CTYRAG | 3 cut(s) | 131, 1518, 1940 |
| SmoI | CTYRAG | 3 cut(s) | 131, 1518, 1940 |
| SpeI | ACTAGT | 1 cut(s) | 3359 |
| SphI | GCATGC | 1 cut(s) | 588 |
| SsiI | CCGC | 4 cut(s) | 409, 1139, 1332, 3101 |
| SspI | AATATT | 3 cut(s) | 494, 1871, 2214 |
| SspMI | CTAG | 9 cut(s) | 221, 560, 1016, 1394, 1700, 2583, 2849, 3360, 3468 |
| SstI | GAGCTC | 1 cut(s) | 867 |
| StyD4I | CCNGG | 4 cut(s) | 117, 843, 1809, 2430 |
| StyI | CCWWGG | 2 cut(s) | 972, 1281 |
| TaaI | ACNGT | 4 cut(s) | 479, 937, 1804, 2291 |
| TaiI | ACGT | 6 cut(s) | 9, 533, 804, 1352, 1561, 2959 |
| TatI | WGTACW | 2 cut(s) | 764, 823 |
| TauI | GCSGC | 1 cut(s) | 412 |
| TscAI | CASTG | 6 cut(s) | 382, 895, 1008, 1661, 2446, 3505 |
| TseFI | GTSAC | 5 cut(s) | 544, 2070, 2635, 3110, 3355 |
| Tsp45I | GTSAC | 5 cut(s) | 544, 2070, 2635, 3110, 3355 |
| TspDTI | ATGAA | 9 cut(s) | 357, 474, 729, 1134, 1308, 1332, 2780, 3009, 3302 |
| TspGWI | ACGGA | 4 cut(s) | 943, 2053, 2140, 3062 |
| TspRI | CASTG | 6 cut(s) | 382, 895, 1008, 1661, 2446, 3505 |
| Vha464I | CTTAAG | 1 cut(s) | 1940 |
| VpaK11BI | GGWCC | 3 cut(s) | 395, 443, 2061 |
| XapI | RAATTY | 5 cut(s) | 40, 370, 829, 1236, 1730 |
| XbaI | TCTAGA | 1 cut(s) | 559 |
| XceI | RCATGY | 6 cut(s) | 588, 959, 1599, 2255, 2285, 3508 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2368 |
| XhoI | CTCGAG | 1 cut(s) | 1518 |
| XmiI | GTMKAC | 2 cut(s) | 2286, 2648 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1375, 1647, 2142, 3156 |
| XspI | CTAG | 9 cut(s) | 221, 560, 1016, 1394, 1700, 2583, 2849, 3360, 3468 |
| Zsp2I | ATGCAT | 3 cut(s) | 906, 1597, 3145 |