RLG00000022677

LisH domain and HEAT repeat-containing protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Reverse (-)
9172546 .. 9183638
11093 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000022677

Sequence Viewer

Length: 3498 bp
ATGGACGTGGAAAAGTCGTCTTTGTGCAATTGTGTGGTGAACTTTCTGCTGGAAGAGAACTACTTGCTGACGGCATTCGAGCTCCTCCAGGAGCTTCTCGACGATGGCAGAGACGATCAGGCCATTCGTCTCAAAAACTTCTTCTCTGACTCCTCCCAATTCCCTCCCGATCAGATCTCTCGCTTCAACTCTCTCCGAGTTGCAGATCCTCAAAGTTTGCTTCAGGAGAAAGAAGCAGTAGAAGAAAAATTAGCAATTAGTGACTATGAGCTTCGTTTAGCCCAAGAGGACATTTTGAAATTCAAGACTGAACTGCAGAAGAAAGCAGAATCTCCAGTAACTGAATTGAGGGAGTCAAATGCTAGTGTAAATAATGGACCCCAATATCAGCGGCAAAAGACAGATGTCTCCTTCTCGGATTTGGGTCCCTTGAAAGATAATGAACGTCGAGATCTTAACTGTGCTGTAAAGGAATATTTGCTAATAGCAGGTTACCGGCTTACTGCAATGACATTTTTCGAAGAGGTCACAGACCAGAATCTAGATGTTTGGCAGAACTCACCCGCATGTGTACCAGATGCCCTGCGCCATTATTATTATCAGTATCTTTCATCCACTACAGAGGCTGCTGAGGAGAAAATTTCCATGCTTCGGAAAAATGAGTCGTTATTGGAAAAAAATGAGAAGCTAAATCATGAAAAGCTGTGCTTGGTTAAAAACAAAGACATGGCTGAAGGTCAAATAAGTGCACTCAACAAATCATTGGAATCTCTTCAGAAGGACCTTAAAGACAAAGAGAACCTTGTACAAGATTTGAAGCAGTCCTTGGAGCACCAAAGAAAGGAGCTCAATGATGGTAGAGGTGAAATCACTGCTTTGAAAATGCACATTGAAGGATCTCGTTCGGGACGAAATATGGTAGCCACTGATGTTGATCATGTGCAATCCCCGTCATTGGAAAAATACAAAGAAGAGGTGAAATCACTGCAGATGGAACTAGAAATTTTAAGATCCAATATTGCAAATGCTCCCGATTATATAGTTTCCGTCCAGGCTGGGAAAGAGTCTATGCAGATGGAAGAAAAGGTCGTCCAGGCTGGGAAAGAGTCTATGCAGATGGAAGAAAAGGTCGTGGTCATGGATGAAGAGAAAAGTATAATCCAGCATCCAGTTGATGCAATAACAAGAGTTGTGGAAGAAGCTGATCAATCACTAGCTGCTGATGACAACCTAATTACACCTAAGGAAGTCTCAGAAGAATATTCAGTCAATCCTTCAAATGGTAGTACTGCCTTGACAAATGGTGAAAGTGTCTCCAAACAAAATGTTGAACCATCTGCATCTACCATGTTACATCTAACAACAGAGGATCATACTGCTGAAATTGCTTCAGAGAAAAGGGGTCTACAGACCATTCAGATCCTTGCTGATGCCTTACCCAAGATTGTTCCTTATGTTCTAATCAACCACCGCGAGGAGCTACTTCCTCTGATCATGTGTGCTATTGAGCGCCATCCAGAGAGCAGTACTCGAGATTCCTTGACCCACACATTGTTTAATCTAATCAAACGTCCAGATGAGCAGCAAAGAAGAATTATAATGGATGCATGCGTCAGCCTTGCTCAGAATGTAGGAGAGATGAGAACAGAAACAGAGTTGCTTCCCCAGTGTTGGGAGCAAATAAATCATACCTATGAGGAACGCAGGTTGCTAGTTGCTCAATCATGTGGAGAGCTTGCAGAATTTGTTCGGCCTGAGATCCGTGATTCTCTTATCTTATCTATTGTTCAACAACTCATAGAAGATTCTGCAACTGTTGTCCGGGAGGCTGCTGTTCATAATCTTGCATTGCTGCTTCCACTCTTTCCAAATATGGACAAATATTTCAAGGTTGAGGAATTGATGTTCCAATTGGTCTGCGATCCCTCTGGAGTGGTGGTGGAAACTACACTCAAAGAATTAGTCCCTGCAGCAATCAAGTGGGGACACAAATTAGACCGTGTTTTAAGAGTTCTGCTATCTCATATATTGAGCTCCGCTGAGCGCTGTCCTCCACTTTCGGGGGTTGAAGGGTCTGTGGAGTCGCATCTTCGTGTGTTAGGAGAACGAGAACGCTGGAATGTCGATGTTTTATTACGGATGCTACTGGAAATGCTTCCATCTGTGCACCAGAAGGCGATTGAGATGTCCCCATTTTCTTCTGATCCTGAAACAACTGGAACAATATTTTCTACACCTTTCCTTGAATTATATGCAGGGGGACATGTTCAATTGCCTGCTTTTGAGTGGTTGCATGTCGACTGCATACCCGATTTGATAGAGCTTGCCTGCTTGCTACCTCCGAAAGAAGATACTTTGCGAAATCGAATCACCAGGTTTTTGTTGGCTGTATCTGAACACTACGGGGATTCTTATTTGACACATATAGTGCTCCCTATATTCCTTGTAGCCATTGGGGAAGATGCTCATTTGACATATTTCCCGTCTGAAAGCCATTCCAAAATTGAAGGTTTGATGCCAAGGACTGCTGTGGCTAAGAGACTGGCTACTATGTGCATCTTACCTCTTCTCTTGGCTGGAGTTTTGGGTGCCCCTAGCAAGCATGAACAATTAGTGGAGTATTTGAGAAAGCTATTAGTTGAAGGTGTGGGAAATCAGTCTACAACGTGCAATGCTGAGATTATTGATGCTGTCCGCTTCCTGTGCACATTTGAAGTTCATCATGGCATGATATTTAATATACTCTGGGAAATGGTTGTCAGCTCCAACATAGATATGAAAATCAATGCGGCCAATCTGTTGAAAGTTATTGTTCCATATATCGATGCAAAAGTTGCATCTACTCATATTTTGCCTGCCCTAGTAACTCTGGGCTCCGACCAAAACCTTAGTGTGAAGTATGCAAGCATAGTTGCCTTTGGAGCTGTCGCCCAACATTTTAAAAATGATATGATTGTCGATAAGATACGGGTTCAGATGGATGCTTTTCTTGAAGATGGATCCCATGAAGCTACCATTGCTGTGATTTTTCACCTTACTGCCAGTCTGCCTGCGAGTGACATGATGCGTCGTCGTGAGAGAGCAAATGCATTCTGTGAAGCAATCCGTGCTTTAGATGCAACAGATATTTCAGCAACCAGTGTACGAGACTTCCTCCTACCTACCATCCAGAACCTATTGAAGGACTCAGATGCACTGGATCCAGTACACAAGGAAGCCCTTGAAATTATAATGAAGGAGAGATCTGGTGGTACCTTTGAGACCATCAGTAAGGTGATGGGTGCTGGACTTGCATCCTCTGTGAGTAGTTTCTTTGGTGAAGGTGGGCTGCTGGGCAAGAAGGATAGTGTTGAGCCACTGCCAGAGCCAGCTGAGTCCCCGAAGTCTGCACCACTGCCACCAGTAGAGGACACTAGATTAAGGCGCATTATGAGGGGAAATTTCACTGACATGCTCAGAGGCAAAGTAAAGGGCCAAGACGAAACTCAGAACCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1166

Amino Acids

130.69

Weight (kDa)

5.05

Isoelectric Point (pI)

51.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1598, 3230
Acc36I ACCTGC 2 cut(s) 479, 1695
Acc65I GGTACC 1 cut(s) 3251
AccB1I GGYRCC 2 cut(s) 2588, 3251
AccI GTMKAC 3 cut(s) 1405, 2298, 2660
AccII CGCG 1 cut(s) 1473
AciI CCGC 6 cut(s) 391, 564, 1471, 2037, 2695, 2789
AcoI YGGCCR 1 cut(s) 2790
AcsI RAATTY 5 cut(s) 299, 639, 1002, 1742, 3439
AcuI CTGAAG 4 cut(s) 206, 753, 758, 1374
AfaI GTAC 7 cut(s) 573, 807, 1288, 1528, 3144, 3207, 3253
AfeI AGCGCT 1 cut(s) 2045
AfiI CCNNNNNNNGG 9 cut(s) 651, 841, 955, 1280, 1474, 1671, 1672, 2060, 3181
AflIII ACRYGT 1 cut(s) 2263
AjiI CACGTC 1 cut(s) 7
AjnI CCWGG 4 cut(s) 87, 1050, 1092, 2372
AjuI GAANNNNNNNTTGG 2 cut(s) 809, 841
AloI GAACNNNNNNTCC 2 cut(s) 1889, 1921
Alw21I GWGCWC 8 cut(s) 84, 751, 834, 849, 2036, 2169, 2433, 2708
Alw26I GTCTC 8 cut(s) 105, 134, 412, 1255, 1318, 2533, 3141, 3254
Alw44I GTGCAC 3 cut(s) 747, 2165, 2704
AlwNI CAGNNNCTG 2 cut(s) 341, 626
Ama87I CYCGRG 1 cut(s) 1530
Aor51HI AGCGCT 1 cut(s) 2045
AoxI GGCC 4 cut(s) 120, 1751, 2790, 3472
ApaLI GTGCAC 3 cut(s) 747, 2165, 2704
ApeKI GCWGC 7 cut(s) 626, 1217, 1582, 1829, 1852, 1970, 3328
ApoI RAATTY 5 cut(s) 299, 639, 1002, 1742, 3439
ArsI GACNNNNNNTTYG 2 cut(s) 1947, 1979
Asp700I GAANNNNTTC 3 cut(s) 771, 1746, 2154
Asp718I GGTACC 1 cut(s) 3251
AspLEI GCGC 4 cut(s) 588, 1512, 2046, 3426
AspS9I GGNCC 4 cut(s) 377, 425, 781, 3472
AsuC2I CCSGG 1 cut(s) 1823
AsuHPI GGTGA 9 cut(s) 49, 552, 875, 988, 1316, 2362, 3023, 3286, 3329
AsuII TTCGAA 1 cut(s) 519
AvaI CYCGRG 1 cut(s) 1530
AvaII GGWCC 3 cut(s) 377, 425, 781
AxyI CCTNAGG 1 cut(s) 1242
BaeGI GKGCMC 4 cut(s) 751, 2169, 2593, 2708
BamHI GGATCC 2 cut(s) 2999, 3199
BanI GGYRCC 2 cut(s) 2588, 3251
BanII GRGCYC 4 cut(s) 84, 849, 2036, 2876
Bbv12I GWGCWC 8 cut(s) 84, 751, 834, 849, 2036, 2169, 2433, 2708
BbvCI CCTCAGC 1 cut(s) 630
BbvI GCAGC 7 cut(s) 613, 1204, 1594, 1816, 1839, 1982, 3315
BceAI ACGGC 1 cut(s) 87
BciT130I CCWGG 4 cut(s) 89, 1052, 1094, 2374
BclI TGATCA 3 cut(s) 934, 1204, 1491
BcnI CCSGG 1 cut(s) 1823
BcoDI GTCTC 8 cut(s) 105, 134, 412, 1255, 1318, 2533, 3141, 3254
BfaI CTAG 8 cut(s) 363, 542, 998, 1214, 1712, 2595, 2861, 3414
BfmI CTRYAG 5 cut(s) 314, 618, 986, 1406, 1968
BfoI RGCGCY 2 cut(s) 1513, 2047
BfuAI ACCTGC 2 cut(s) 479, 1695
BglII AGATCT 3 cut(s) 174, 451, 3242
BisI GCNGC 9 cut(s) 392, 627, 1218, 1583, 1830, 1853, 1971, 2790, 3329
BlpI GCTNAGC 1 cut(s) 2040
BlsI GCNGC 9 cut(s) 393, 628, 1219, 1584, 1831, 1854, 1972, 2791, 3330
BmcAI AGTACT 2 cut(s) 1288, 1528
Bme1390I CCNGG 5 cut(s) 89, 1052, 1094, 1823, 2374
Bme18I GGWCC 3 cut(s) 377, 425, 781
BmeT110I CYCGRG 1 cut(s) 1530
BmgBI CACGTC 1 cut(s) 7
BmgT120I GGNCC 4 cut(s) 377, 425, 781, 3472
BmiI GGNNCC 8 cut(s) 379, 426, 427, 2590, 2875, 3001, 3201, 3253
BmrFI CCNGG 5 cut(s) 89, 1052, 1094, 1823, 2374
BmrI ACTGGG 1 cut(s) 1660
BmuI ACTGGG 1 cut(s) 1660
BoxI GACNNNNGTC 1 cut(s) 404
BplI GAGNNNNNCTC 4 cut(s) 1513, 1545, 3138, 3170
BpmI CTGGAG 4 cut(s) 71, 318, 1950, 2598
Bpu10I CCTNAGC 1 cut(s) 630
Bpu1102I GCTNAGC 1 cut(s) 2040
Bpu14I TTCGAA 1 cut(s) 519
BpuMI CCSGG 1 cut(s) 1823
Bsa29I ATCGAT 1 cut(s) 2823
BsaBI GATNNNNATC 1 cut(s) 933
BsaI GGTCTC 1 cut(s) 3254
BsaJI CCNNGG 2 cut(s) 825, 2519
BsaXI ACNNNNNCTCC 2 cut(s) 1923, 1953
Bsc4I CCNNNNNNNGG 9 cut(s) 651, 841, 955, 1280, 1474, 1671, 1672, 2060, 3181
Bse118I RCCGGY 1 cut(s) 495
Bse21I CCTNAGG 1 cut(s) 1242
Bse3DI GCAATG 4 cut(s) 513, 1847, 2677, 3015
Bse8I GATNNNNATC 1 cut(s) 933
BseBI CCWGG 4 cut(s) 89, 1052, 1094, 2374
BseCI ATCGAT 1 cut(s) 2823
BseDI CCNNGG 2 cut(s) 825, 2519
BseGI GGATG 9 cut(s) 611, 1147, 1165, 1513, 1609, 2145, 2986, 3165, 3293
BseJI GATNNNNATC 1 cut(s) 933
BseLI CCNNNNNNNGG 9 cut(s) 651, 841, 955, 1280, 1474, 1671, 1672, 2060, 3181
BseMI GCAATG 4 cut(s) 513, 1847, 2677, 3015
BseMII CTCAG 9 cut(s) 621, 1266, 1637, 1746, 2031, 2667, 3201, 3363, 3469
BseRI GAGGAG 4 cut(s) 74, 142, 647, 1490
BseSI GKGCMC 4 cut(s) 751, 2169, 2593, 2708
BseXI GCAGC 7 cut(s) 613, 1204, 1594, 1816, 1839, 1982, 3315
BseYI CCCAGC 3 cut(s) 1055, 1097, 3331
BsgI GTGCAG 1 cut(s) 3372
Bsh1236I CGCG 1 cut(s) 1473
BshFI GGCC 4 cut(s) 122, 1753, 2792, 3474
BshNI GGYRCC 2 cut(s) 2588, 3251
BshVI ATCGAT 1 cut(s) 2823
BsiHKAI GWGCWC 8 cut(s) 84, 751, 834, 849, 2036, 2169, 2433, 2708
BsiHKCI CYCGRG 1 cut(s) 1530
BsiSI CCGG 2 cut(s) 496, 1822
BslFI GGGAC 7 cut(s) 411, 921, 1949, 1998, 2173, 2274, 3361
BslI CCNNNNNNNGG 9 cut(s) 651, 841, 955, 1280, 1474, 1671, 1672, 2060, 3181
BsmAI GTCTC 8 cut(s) 105, 134, 412, 1255, 1318, 2533, 3141, 3254
BsmBI CGTCTC 2 cut(s) 105, 134
BsmFI GGGAC 7 cut(s) 411, 921, 1949, 1998, 2173, 2274, 3361
BsmI GAATGC 2 cut(s) 74, 3089
BsnI GGCC 4 cut(s) 122, 1753, 2792, 3474
Bso31I GGTCTC 1 cut(s) 3254
BsoBI CYCGRG 1 cut(s) 1530
Bsp119I TTCGAA 1 cut(s) 519
Bsp1407I TGTACA 1 cut(s) 805
Bsp1720I GCTNAGC 1 cut(s) 2040
BspACI CCGC 6 cut(s) 391, 564, 1471, 2037, 2695, 2789
BspANI GGCC 4 cut(s) 122, 1753, 2792, 3474
BspCNI CTCAG 9 cut(s) 622, 1265, 1636, 1747, 2032, 2668, 3200, 3364, 3468
BspDI ATCGAT 1 cut(s) 2823
BspFNI CGCG 1 cut(s) 1473
BspHI TCATGA 1 cut(s) 694
BspLI GGNNCC 8 cut(s) 379, 426, 427, 2590, 2875, 3001, 3201, 3253
BspMAI CTGCAG 3 cut(s) 318, 990, 1972
BspMI ACCTGC 2 cut(s) 479, 1695
BspT104I TTCGAA 1 cut(s) 519
BspT107I GGYRCC 2 cut(s) 2588, 3251
BspTNI GGTCTC 1 cut(s) 3254
BsrDI GCAATG 4 cut(s) 513, 1847, 2677, 3015
BsrFI RCCGGY 1 cut(s) 495
BsrGI TGTACA 1 cut(s) 805
BssAI RCCGGY 1 cut(s) 495
BssECI CCNNGG 2 cut(s) 825, 2519
BssT1I CCWWGG 2 cut(s) 825, 2519
Bst2UI CCWGG 4 cut(s) 89, 1052, 1094, 2374
Bst4CI ACNGT 3 cut(s) 461, 1816, 2000
Bst6I CTCTTC 6 cut(s) 48, 516, 777, 966, 1140, 2571
BstAPI GCANNNNNTGC 2 cut(s) 2834, 3107
BstAUI TGTACA 1 cut(s) 805
BstBI TTCGAA 1 cut(s) 519
BstEII GGTNACC 1 cut(s) 491
BstENI CCTNNNNNAGG 1 cut(s) 3179
BstF5I GGATG 9 cut(s) 611, 1147, 1165, 1513, 1609, 2145, 2986, 3165, 3293
BstFNI CGCG 1 cut(s) 1473
BstH2I RGCGCY 2 cut(s) 1513, 2047
BstHHI GCGC 4 cut(s) 588, 1512, 2046, 3426
BstMAI GTCTC 8 cut(s) 105, 134, 412, 1255, 1318, 2533, 3141, 3254
BstMWI GCNNNNNNNGC 8 cut(s) 1385, 2703, 2834, 2921, 3017, 3107, 3116, 3290
BstNI CCWGG 4 cut(s) 89, 1052, 1094, 2374
BstNSI RCATGY 5 cut(s) 570, 1611, 2267, 2297, 3454
BstPAI GACNNNNGTC 1 cut(s) 404
BstPI GGTNACC 1 cut(s) 491
BstSCI CCNGG 5 cut(s) 87, 1050, 1092, 1821, 2372
BstSFI CTRYAG 5 cut(s) 314, 618, 986, 1406, 1968
BstSLI GKGCMC 4 cut(s) 751, 2169, 2593, 2708
BstUI CGCG 1 cut(s) 1473
BstV1I GCAGC 7 cut(s) 613, 1204, 1594, 1816, 1839, 1982, 3315
Bsu15I ATCGAT 1 cut(s) 2823
Bsu36I CCTNAGG 1 cut(s) 1242
BsuRI GGCC 4 cut(s) 122, 1753, 2792, 3474
BsuTUI ATCGAT 1 cut(s) 2823
BtrI CACGTC 1 cut(s) 7
BtsCI GGATG 9 cut(s) 611, 1147, 1165, 1513, 1609, 2145, 2986, 3165, 3293
BtsI GCAGTG 4 cut(s) 870, 983, 3356, 3392
BtsIMutI CAGTG 9 cut(s) 870, 924, 983, 1673, 3145, 3194, 3356, 3392, 3444
BveI ACCTGC 2 cut(s) 479, 1695
CaiI CAGNNNCTG 2 cut(s) 341, 626
CciI TCATGA 1 cut(s) 694
CfoI GCGC 4 cut(s) 588, 1512, 2046, 3426
Cfr10I RCCGGY 1 cut(s) 495
Cfr13I GGNCC 4 cut(s) 377, 425, 781, 3472
ClaI ATCGAT 1 cut(s) 2823
CseI GACGC 2 cut(s) 1600, 3056
CsiI ACCWGGT 1 cut(s) 2372
Csp6I GTAC 7 cut(s) 572, 806, 1287, 1527, 3143, 3206, 3252
CspCI CAANNNNNGTGG 4 cut(s) 913, 948, 1173, 1208
CviQI GTAC 7 cut(s) 572, 806, 1287, 1527, 3143, 3206, 3252
DraI TTTAAA 1 cut(s) 2941
EaeI YGGCCR 1 cut(s) 2790
Eam1104I CTCTTC 6 cut(s) 48, 516, 777, 966, 1140, 2571
EarI CTCTTC 6 cut(s) 48, 516, 777, 966, 1140, 2571
Ecl136II GAGCTC 3 cut(s) 82, 847, 2034
Eco130I CCWWGG 2 cut(s) 825, 2519
Eco24I GRGCYC 4 cut(s) 84, 849, 2036, 2876
Eco31I GGTCTC 1 cut(s) 3254
Eco47I GGWCC 3 cut(s) 377, 425, 781
Eco47III AGCGCT 1 cut(s) 2045
Eco53kI GAGCTC 3 cut(s) 82, 847, 2034
Eco57I CTGAAG 4 cut(s) 206, 753, 758, 1374
Eco81I CCTNAGG 1 cut(s) 1242
Eco88I CYCGRG 1 cut(s) 1530
Eco91I GGTNACC 1 cut(s) 491
EcoICRI GAGCTC 3 cut(s) 82, 847, 2034
EcoNI CCTNNNNNAGG 1 cut(s) 3179
EcoO109I RGGNCCY 2 cut(s) 425, 781
EcoO65I GGTNACC 1 cut(s) 491
EcoRII CCWGG 4 cut(s) 87, 1050, 1092, 2372
EcoT14I CCWWGG 2 cut(s) 825, 2519
EcoT22I ATGCAT 2 cut(s) 1609, 3091
EcoT38I GRGCYC 4 cut(s) 84, 849, 2036, 2876
ErhI CCWWGG 2 cut(s) 825, 2519
Esp3I CGTCTC 2 cut(s) 105, 134
FalI AAGNNNNNCTT 6 cut(s) 692, 724, 786, 818, 809, 841
FaqI GGGAC 7 cut(s) 411, 921, 1949, 1998, 2173, 2274, 3361
FauI CCCGC 1 cut(s) 571
FbaI TGATCA 3 cut(s) 934, 1204, 1491
FblI GTMKAC 3 cut(s) 1405, 2298, 2660
Fnu4HI GCNGC 9 cut(s) 392, 627, 1218, 1583, 1830, 1853, 1971, 2790, 3329
FokI GGATG 9 cut(s) 598, 1152, 1154, 1500, 1616, 2152, 2993, 3152, 3280
FriOI GRGCYC 4 cut(s) 84, 849, 2036, 2876
Fsp4HI GCNGC 9 cut(s) 392, 627, 1218, 1583, 1830, 1853, 1971, 2790, 3329
FspBI CTAG 8 cut(s) 363, 542, 998, 1214, 1712, 2595, 2861, 3414
GlaI GCGC 4 cut(s) 587, 1511, 2045, 3425
GluI GCNGC 9 cut(s) 392, 627, 1218, 1583, 1830, 1853, 1971, 2790, 3329
GsaI CCCAGC 3 cut(s) 1059, 1101, 3335
GsuI CTGGAG 4 cut(s) 71, 318, 1950, 2598
HaeII RGCGCY 2 cut(s) 1513, 2047
HaeIII GGCC 4 cut(s) 122, 1753, 2792, 3474
HapII CCGG 2 cut(s) 496, 1822
HgaI GACGC 2 cut(s) 1600, 3056
HhaI GCGC 4 cut(s) 588, 1512, 2046, 3426
Hin6I GCGC 4 cut(s) 586, 1510, 2044, 3424
HinP1I GCGC 4 cut(s) 586, 1510, 2044, 3424
HincII GTYRAC 1 cut(s) 2299
HindII GTYRAC 1 cut(s) 2299
HpaII CCGG 2 cut(s) 496, 1822
HphI GGTGA 9 cut(s) 49, 552, 875, 988, 1316, 2362, 3023, 3286, 3329
Hpy99I CGWCG 4 cut(s) 104, 450, 3072, 3075
HpyCH4III ACNGT 3 cut(s) 461, 1816, 2000
HpyCH4IV ACGT 4 cut(s) 6, 445, 1570, 2666
HpyF10VI GCNNNNNNNGC 8 cut(s) 1385, 2703, 2834, 2921, 3017, 3107, 3116, 3290
HpySE526I ACGT 4 cut(s) 6, 445, 1570, 2666
HspAI GCGC 4 cut(s) 586, 1510, 2044, 3424
KflI GGGWCCC 1 cut(s) 425
KpnI GGTACC 1 cut(s) 3255
Ksp22I TGATCA 3 cut(s) 934, 1204, 1491
Lsp1109I GCAGC 7 cut(s) 613, 1204, 1594, 1816, 1839, 1982, 3315
MabI ACCWGGT 1 cut(s) 2372
MaeI CTAG 8 cut(s) 363, 542, 998, 1214, 1712, 2595, 2861, 3414
MaeII ACGT 4 cut(s) 6, 445, 1570, 2666
MaeIII GTNAC 7 cut(s) 260, 337, 491, 526, 1350, 2863, 3056
MfeI CAATTG 3 cut(s) 28, 1910, 2270
MlyI GAGTC 8 cut(s) 143, 362, 671, 1073, 1115, 2090, 3179, 3383
MmeI TCCRAC 2 cut(s) 2790, 2901
Mph1103I ATGCAT 2 cut(s) 1609, 3091
MroXI GAANNNNTTC 3 cut(s) 771, 1746, 2154
MseI TTAA 9 cut(s) 456, 714, 786, 1007, 1557, 2006, 2736, 2940, 3419
MslI CAYNNNNRTG 6 cut(s) 565, 1692, 2091, 2774, 3020, 3449
MspA1I CMGCKG 3 cut(s) 391, 2039, 3371
MspI CCGG 2 cut(s) 496, 1822
MspR9I CCNGG 5 cut(s) 89, 1052, 1094, 1823, 2374
MunI CAATTG 3 cut(s) 28, 1910, 2270
Mva1269I GAATGC 2 cut(s) 74, 3089
MvaI CCWGG 4 cut(s) 89, 1052, 1094, 2374
MvnI CGCG 1 cut(s) 1473
MwoI GCNNNNNNNGC 8 cut(s) 1385, 2703, 2834, 2921, 3017, 3107, 3116, 3290
NciI CCSGG 1 cut(s) 1823
NlaIV GGNNCC 8 cut(s) 379, 426, 427, 2590, 2875, 3001, 3201, 3253
NmuCI GTSAC 3 cut(s) 260, 526, 3056
NsiI ATGCAT 2 cut(s) 1609, 3091
NspI RCATGY 5 cut(s) 570, 1611, 2267, 2297, 3454
NspV TTCGAA 1 cut(s) 519
PaeI GCATGC 1 cut(s) 1611
PaeR7I CTCGAG 1 cut(s) 1530
PagI TCATGA 1 cut(s) 694
PciI ACATGT 1 cut(s) 2263
PcsI WCGNNNNNNNCGW 1 cut(s) 907
PctI GAATGC 2 cut(s) 74, 3089
PdmI GAANNNNTTC 3 cut(s) 771, 1746, 2154
PfeI GAWTC 8 cut(s) 329, 538, 767, 1535, 1766, 1805, 2367, 2408
PfoI TCCNGGA 2 cut(s) 87, 1821
PkrI GCNGC 9 cut(s) 393, 628, 1219, 1584, 1831, 1854, 1972, 2791, 3330
PleI GAGTC 8 cut(s) 143, 361, 670, 1072, 1114, 2089, 3179, 3382
PpsI GAGTC 8 cut(s) 143, 361, 670, 1072, 1114, 2089, 3179, 3382
PpuMI RGGWCCY 2 cut(s) 425, 781
PscI ACATGT 1 cut(s) 2263
PshAI GACNNNNGTC 1 cut(s) 404
PsiI TTATAA 2 cut(s) 1598, 3230
Psp124BI GAGCTC 3 cut(s) 84, 849, 2036
Psp5II RGGWCCY 2 cut(s) 425, 781
Psp6I CCWGG 4 cut(s) 87, 1050, 1092, 2372
PspEI GGTNACC 1 cut(s) 491
PspFI CCCAGC 3 cut(s) 1055, 1097, 3331
PspGI CCWGG 4 cut(s) 87, 1050, 1092, 2372
PspN4I GGNNCC 8 cut(s) 379, 426, 427, 2590, 2875, 3001, 3201, 3253
PspPI GGNCC 4 cut(s) 377, 425, 781, 3472
PspPPI RGGWCCY 2 cut(s) 425, 781
PstI CTGCAG 3 cut(s) 318, 990, 1972
PstNI CAGNNNCTG 2 cut(s) 341, 626
PvuII CAGCTG 1 cut(s) 3371
RsaI GTAC 7 cut(s) 573, 807, 1288, 1528, 3144, 3207, 3253
RsaNI GTAC 7 cut(s) 572, 806, 1287, 1527, 3143, 3206, 3252
RseI CAYNNNNRTG 6 cut(s) 565, 1692, 2091, 2774, 3020, 3449
SacI GAGCTC 3 cut(s) 84, 849, 2036
SalI GTCGAC 1 cut(s) 2297
SaqAI TTAA 9 cut(s) 456, 714, 786, 1007, 1557, 2006, 2736, 2940, 3419
SatI GCNGC 9 cut(s) 392, 627, 1218, 1583, 1830, 1853, 1971, 2790, 3329
Sau96I GGNCC 4 cut(s) 377, 425, 781, 3472
ScaI AGTACT 2 cut(s) 1288, 1528
SchI GAGTC 8 cut(s) 143, 362, 671, 1073, 1115, 2090, 3179, 3383
ScrFI CCNGG 5 cut(s) 89, 1052, 1094, 1823, 2374
SexAI ACCWGGT 1 cut(s) 2372
SfcI CTRYAG 5 cut(s) 314, 618, 986, 1406, 1968
Sfr274I CTCGAG 1 cut(s) 1530
SfuI TTCGAA 1 cut(s) 519
SinI GGWCC 3 cut(s) 377, 425, 781
SlaI CTCGAG 1 cut(s) 1530
SmiMI CAYNNNNRTG 6 cut(s) 565, 1692, 2091, 2774, 3020, 3449
SmlI CTYRAG 1 cut(s) 1530
SmoI CTYRAG 1 cut(s) 1530
SphI GCATGC 1 cut(s) 1611
SsiI CCGC 6 cut(s) 391, 564, 1471, 2037, 2695, 2789
SspI AATATT 5 cut(s) 476, 1018, 1262, 1883, 2226
SspMI CTAG 8 cut(s) 363, 542, 998, 1214, 1712, 2595, 2861, 3414
SstI GAGCTC 3 cut(s) 84, 849, 2036
StyD4I CCNGG 5 cut(s) 87, 1050, 1092, 1821, 2372
StyI CCWWGG 2 cut(s) 825, 2519
TaaI ACNGT 3 cut(s) 461, 1816, 2000
TaiI ACGT 4 cut(s) 9, 448, 1573, 2669
TatI WGTACW 4 cut(s) 805, 1286, 1526, 3205
TauI GCSGC 2 cut(s) 394, 2792
TfiI GAWTC 8 cut(s) 329, 538, 767, 1535, 1766, 1805, 2367, 2408
Tru1I TTAA 9 cut(s) 456, 714, 786, 1007, 1557, 2006, 2736, 2940, 3419
Tru9I TTAA 9 cut(s) 456, 714, 786, 1007, 1557, 2006, 2736, 2940, 3419
TscAI CASTG 9 cut(s) 877, 931, 990, 1673, 3145, 3201, 3363, 3399, 3451
TseFI GTSAC 3 cut(s) 260, 526, 3056
TseI GCWGC 7 cut(s) 626, 1217, 1582, 1829, 1852, 1970, 3328
Tsp45I GTSAC 3 cut(s) 260, 526, 3056
TspGWI ACGGA 4 cut(s) 1036, 1751, 2152, 3095
TspRI CASTG 9 cut(s) 877, 931, 990, 1673, 3145, 3201, 3363, 3399, 3451
VneI GTGCAC 3 cut(s) 747, 2165, 2704
VpaK11BI GGWCC 3 cut(s) 377, 425, 781
XagI CCTNNNNNAGG 1 cut(s) 3179
XapI RAATTY 5 cut(s) 299, 639, 1002, 1742, 3439
XbaI TCTAGA 1 cut(s) 541
XceI RCATGY 5 cut(s) 570, 1611, 2267, 2297, 3454
XcmI CCANNNNNNNNNTGG 1 cut(s) 2380
XhoI CTCGAG 1 cut(s) 1530
XmiI GTMKAC 3 cut(s) 1405, 2298, 2660
XmnI GAANNNNTTC 3 cut(s) 771, 1746, 2154
XspI CTAG 8 cut(s) 363, 542, 998, 1214, 1712, 2595, 2861, 3414
ZrmI AGTACT 2 cut(s) 1288, 1528
Zsp2I ATGCAT 2 cut(s) 1609, 3091
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.