LisH domain and HEAT repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G16210 |
| fragaria_vesca | FvH4_7g07990 FvH4_7g07990 FvH4_7g07990 FvH4_7g07990 FvH4_7g07990 FvH4_7g07990 FvH4_7g07990 |
| malus_domestica | MD09G1255900.v1.1 MD17G1249200.v1.1 MD17G1249700.v1.1 MD17G1249900.v1.1 |
| prunus_persica | Prupe.3G148000_v2.0.a1 Prupe.3G148000_v2.0.a1 Prupe.3G148000_v2.0.a1 Prupe.3G148000_v2.0.a1 |
| pyrus_communis | pycom09g17170 pycom09g17180 pycom17g25370 |
| rosa_chinensis | RchiOBHm_Chr3g0494111 RchiOBHm_Chr3g0494121 |
| rosa_laevigata | RLG00000022677 |
| rosa_multiflora | Rmu_sc0010318.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00243540 Rroxscaffold_6G00391260 |
| rosa_rugosa | Rorug03G0264300 Rorug03G0264400 |
| rosa_samantha | Rh3AG314100 Rh3BG349900 Rh3CG346800 Rh3DG349300 |
| rosa_wichuraiana | Rw3G027460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1556, 3200 |
| Acc36I | ACCTGC | 2 cut(s) | 479, 1653 |
| Acc65I | GGTACC | 1 cut(s) | 3221 |
| AccB1I | GGYRCC | 2 cut(s) | 2546, 3221 |
| AccI | GTMKAC | 3 cut(s) | 1363, 2256, 2618 |
| AccII | CGCG | 1 cut(s) | 1431 |
| AciI | CCGC | 7 cut(s) | 391, 564, 1429, 1995, 2653, 2747, 2814 |
| AcoI | YGGCCR | 1 cut(s) | 2748 |
| AcsI | RAATTY | 7 cut(s) | 299, 556, 639, 1002, 1700, 3119, 3409 |
| AcuI | CTGAAG | 5 cut(s) | 206, 753, 758, 885, 1332 |
| AfaI | GTAC | 8 cut(s) | 573, 807, 1246, 1486, 1794, 3114, 3177, 3223 |
| AfeI | AGCGCT | 1 cut(s) | 2003 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 651, 841, 955, 1238, 1432, 1629, 1630, 2018, 3151 |
| AflIII | ACRYGT | 1 cut(s) | 2666 |
| AjiI | CACGTC | 1 cut(s) | 7 |
| AjnI | CCWGG | 1 cut(s) | 2330 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 746, 778, 809, 841 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1847, 1879 |
| Alw21I | GWGCWC | 7 cut(s) | 84, 751, 834, 849, 1994, 2127, 2666 |
| Alw26I | GTCTC | 7 cut(s) | 105, 134, 412, 1213, 1276, 2491, 3224 |
| Alw44I | GTGCAC | 3 cut(s) | 747, 2123, 2662 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 341, 626 |
| Ama87I | CYCGRG | 1 cut(s) | 1488 |
| Aor51HI | AGCGCT | 1 cut(s) | 2003 |
| AoxI | GGCC | 5 cut(s) | 120, 1368, 1709, 2748, 3442 |
| ApaLI | GTGCAC | 3 cut(s) | 747, 2123, 2662 |
| ApeKI | GCWGC | 5 cut(s) | 626, 1175, 1787, 1810, 2004 |
| ApoI | RAATTY | 7 cut(s) | 299, 556, 639, 1002, 1700, 3119, 3409 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1209, 1241, 1905, 1937 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 771, 1704, 2112 |
| Asp718I | GGTACC | 1 cut(s) | 3221 |
| AspLEI | GCGC | 4 cut(s) | 588, 1470, 2004, 3396 |
| AspS9I | GGNCC | 4 cut(s) | 377, 425, 781, 3442 |
| AsuC2I | CCSGG | 1 cut(s) | 1781 |
| AsuII | TTCGAA | 1 cut(s) | 519 |
| AvaI | CYCGRG | 1 cut(s) | 1488 |
| AvaII | GGWCC | 3 cut(s) | 377, 425, 781 |
| AxyI | CCTNAGG | 1 cut(s) | 1200 |
| BaeGI | GKGCMC | 4 cut(s) | 751, 2127, 2551, 2666 |
| BamHI | GGATCC | 2 cut(s) | 2957, 3169 |
| BanI | GGYRCC | 2 cut(s) | 2546, 3221 |
| BanII | GRGCYC | 4 cut(s) | 84, 849, 1994, 2834 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3282, 3314 |
| BauI | CACGAG | 1 cut(s) | 89 |
| Bbv12I | GWGCWC | 7 cut(s) | 84, 751, 834, 849, 1994, 2127, 2666 |
| BbvCI | CCTCAGC | 1 cut(s) | 630 |
| BbvI | GCAGC | 5 cut(s) | 613, 1162, 1774, 1797, 1991 |
| BceAI | ACGGC | 1 cut(s) | 87 |
| BciT130I | CCWGG | 1 cut(s) | 2332 |
| BclI | TGATCA | 4 cut(s) | 934, 1092, 1162, 1449 |
| BcnI | CCSGG | 1 cut(s) | 1781 |
| BcoDI | GTCTC | 7 cut(s) | 105, 134, 412, 1213, 1276, 2491, 3224 |
| BfaI | CTAG | 7 cut(s) | 542, 998, 1172, 1670, 2553, 2819, 3384 |
| BfmI | CTRYAG | 4 cut(s) | 618, 986, 1364, 1926 |
| BfoI | RGCGCY | 2 cut(s) | 1471, 2005 |
| BfuAI | ACCTGC | 2 cut(s) | 479, 1653 |
| BglII | AGATCT | 3 cut(s) | 174, 451, 3212 |
| BisI | GCNGC | 7 cut(s) | 392, 627, 1176, 1788, 1811, 2005, 2748 |
| BlpI | GCTNAGC | 1 cut(s) | 1998 |
| BlsI | GCNGC | 7 cut(s) | 393, 628, 1177, 1789, 1812, 2006, 2749 |
| BmcAI | AGTACT | 2 cut(s) | 1246, 1486 |
| Bme1390I | CCNGG | 2 cut(s) | 1781, 2332 |
| Bme18I | GGWCC | 3 cut(s) | 377, 425, 781 |
| BmeT110I | CYCGRG | 1 cut(s) | 1488 |
| BmgBI | CACGTC | 1 cut(s) | 7 |
| BmgT120I | GGNCC | 4 cut(s) | 377, 425, 781, 3442 |
| BmiI | GGNNCC | 7 cut(s) | 379, 426, 427, 2548, 2959, 3171, 3223 |
| BmrFI | CCNGG | 2 cut(s) | 1781, 2332 |
| BmrI | ACTGGG | 2 cut(s) | 1618, 3311 |
| BmuI | ACTGGG | 2 cut(s) | 1618, 3311 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1471, 1503, 3108, 3140 |
| BpmI | CTGGAG | 3 cut(s) | 71, 1908, 2556 |
| Bpu10I | CCTNAGC | 1 cut(s) | 630 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1998 |
| Bpu14I | TTCGAA | 1 cut(s) | 519 |
| BpuMI | CCSGG | 1 cut(s) | 1781 |
| Bsa29I | ATCGAT | 1 cut(s) | 2781 |
| BsaBI | GATNNNNATC | 1 cut(s) | 933 |
| BsaI | GGTCTC | 1 cut(s) | 3224 |
| BsaJI | CCNNGG | 2 cut(s) | 825, 2477 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 128, 158, 1881, 1911 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 651, 841, 955, 1238, 1432, 1629, 1630, 2018, 3151 |
| Bse118I | RCCGGY | 1 cut(s) | 495 |
| Bse21I | CCTNAGG | 1 cut(s) | 1200 |
| Bse3DI | GCAATG | 4 cut(s) | 513, 1805, 2635, 2973 |
| Bse8I | GATNNNNATC | 1 cut(s) | 933 |
| BseBI | CCWGG | 1 cut(s) | 2332 |
| BseCI | ATCGAT | 1 cut(s) | 2781 |
| BseDI | CCNNGG | 2 cut(s) | 825, 2477 |
| BseGI | GGATG | 9 cut(s) | 611, 1105, 1123, 1471, 1567, 2103, 2944, 3135, 3263 |
| BseJI | GATNNNNATC | 1 cut(s) | 933 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 651, 841, 955, 1238, 1432, 1629, 1630, 2018, 3151 |
| BseMI | GCAATG | 4 cut(s) | 513, 1805, 2635, 2973 |
| BseMII | CTCAG | 9 cut(s) | 621, 1224, 1595, 1704, 1989, 2625, 3171, 3333, 3439 |
| BseRI | GAGGAG | 5 cut(s) | 68, 74, 142, 647, 1448 |
| BseSI | GKGCMC | 4 cut(s) | 751, 2127, 2551, 2666 |
| BseXI | GCAGC | 5 cut(s) | 613, 1162, 1774, 1797, 1991 |
| BseYI | CCCAGC | 1 cut(s) | 1055 |
| BsgI | GTGCAG | 2 cut(s) | 1091, 3342 |
| Bsh1236I | CGCG | 1 cut(s) | 1431 |
| BshFI | GGCC | 5 cut(s) | 122, 1370, 1711, 2750, 3444 |
| BshNI | GGYRCC | 2 cut(s) | 2546, 3221 |
| BshVI | ATCGAT | 1 cut(s) | 2781 |
| BsiHKAI | GWGCWC | 7 cut(s) | 84, 751, 834, 849, 1994, 2127, 2666 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1488 |
| BsiSI | CCGG | 2 cut(s) | 496, 1780 |
| BslFI | GGGAC | 7 cut(s) | 411, 921, 1907, 1956, 2131, 2232, 3331 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 651, 841, 955, 1238, 1432, 1629, 1630, 2018, 3151 |
| BsmAI | GTCTC | 7 cut(s) | 105, 134, 412, 1213, 1276, 2491, 3224 |
| BsmBI | CGTCTC | 2 cut(s) | 105, 134 |
| BsmFI | GGGAC | 7 cut(s) | 411, 921, 1907, 1956, 2131, 2232, 3331 |
| BsmI | GAATGC | 2 cut(s) | 74, 3059 |
| BsnI | GGCC | 5 cut(s) | 122, 1370, 1711, 2750, 3444 |
| Bso31I | GGTCTC | 1 cut(s) | 3224 |
| BsoBI | CYCGRG | 1 cut(s) | 1488 |
| Bsp119I | TTCGAA | 1 cut(s) | 519 |
| Bsp1286I | GDGCHC | 9 cut(s) | 84, 751, 834, 849, 1994, 2127, 2551, 2666, 2834 |
| Bsp1407I | TGTACA | 2 cut(s) | 805, 1792 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1998 |
| BspACI | CCGC | 7 cut(s) | 391, 564, 1429, 1995, 2653, 2747, 2814 |
| BspANI | GGCC | 5 cut(s) | 122, 1370, 1711, 2750, 3444 |
| BspCNI | CTCAG | 9 cut(s) | 622, 1223, 1594, 1705, 1990, 2626, 3170, 3334, 3438 |
| BspDI | ATCGAT | 1 cut(s) | 2781 |
| BspFNI | CGCG | 1 cut(s) | 1431 |
| BspHI | TCATGA | 1 cut(s) | 694 |
| BspLI | GGNNCC | 7 cut(s) | 379, 426, 427, 2548, 2959, 3171, 3223 |
| BspMAI | CTGCAG | 2 cut(s) | 990, 1930 |
| BspMI | ACCTGC | 2 cut(s) | 479, 1653 |
| BspT104I | TTCGAA | 1 cut(s) | 519 |
| BspT107I | GGYRCC | 2 cut(s) | 2546, 3221 |
| BspTNI | GGTCTC | 1 cut(s) | 3224 |
| BsrDI | GCAATG | 4 cut(s) | 513, 1805, 2635, 2973 |
| BsrFI | RCCGGY | 1 cut(s) | 495 |
| BsrGI | TGTACA | 2 cut(s) | 805, 1792 |
| BssAI | RCCGGY | 1 cut(s) | 495 |
| BssECI | CCNNGG | 2 cut(s) | 825, 2477 |
| BssSI | CACGAG | 1 cut(s) | 89 |
| BssT1I | CCWWGG | 2 cut(s) | 825, 2477 |
| Bst2BI | CACGAG | 1 cut(s) | 89 |
| Bst2UI | CCWGG | 1 cut(s) | 2332 |
| Bst4CI | ACNGT | 2 cut(s) | 461, 1774 |
| Bst6I | CTCTTC | 5 cut(s) | 516, 777, 966, 1098, 2529 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 2792, 3077 |
| BstAUI | TGTACA | 2 cut(s) | 805, 1792 |
| BstBI | TTCGAA | 1 cut(s) | 519 |
| BstEII | GGTNACC | 1 cut(s) | 491 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3149 |
| BstF5I | GGATG | 9 cut(s) | 611, 1105, 1123, 1471, 1567, 2103, 2944, 3135, 3263 |
| BstFNI | CGCG | 1 cut(s) | 1431 |
| BstH2I | RGCGCY | 2 cut(s) | 1471, 2005 |
| BstHHI | GCGC | 4 cut(s) | 588, 1470, 2004, 3396 |
| BstMAI | GTCTC | 7 cut(s) | 105, 134, 412, 1213, 1276, 2491, 3224 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 1343, 2661, 2792, 2975, 3077, 3086, 3260 |
| BstNI | CCWGG | 1 cut(s) | 2332 |
| BstNSI | RCATGY | 5 cut(s) | 570, 1569, 2255, 2670, 3424 |
| BstPI | GGTNACC | 1 cut(s) | 491 |
| BstSCI | CCNGG | 2 cut(s) | 1779, 2330 |
| BstSFI | CTRYAG | 4 cut(s) | 618, 986, 1364, 1926 |
| BstSLI | GKGCMC | 4 cut(s) | 751, 2127, 2551, 2666 |
| BstUI | CGCG | 1 cut(s) | 1431 |
| BstV1I | GCAGC | 5 cut(s) | 613, 1162, 1774, 1797, 1991 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2980 |
| Bsu15I | ATCGAT | 1 cut(s) | 2781 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1200 |
| BsuRI | GGCC | 5 cut(s) | 122, 1370, 1711, 2750, 3444 |
| BsuTUI | ATCGAT | 1 cut(s) | 2781 |
| BtrI | CACGTC | 1 cut(s) | 7 |
| BtsCI | GGATG | 9 cut(s) | 611, 1105, 1123, 1471, 1567, 2103, 2944, 3135, 3263 |
| BtsI | GCAGTG | 4 cut(s) | 870, 983, 3326, 3362 |
| BveI | ACCTGC | 2 cut(s) | 479, 1653 |
| CaiI | CAGNNNCTG | 2 cut(s) | 341, 626 |
| CciI | TCATGA | 1 cut(s) | 694 |
| CfoI | GCGC | 4 cut(s) | 588, 1470, 2004, 3396 |
| Cfr10I | RCCGGY | 1 cut(s) | 495 |
| Cfr13I | GGNCC | 4 cut(s) | 377, 425, 781, 3442 |
| ClaI | ATCGAT | 1 cut(s) | 2781 |
| CseI | GACGC | 2 cut(s) | 1558, 3026 |
| CsiI | ACCWGGT | 1 cut(s) | 2330 |
| Csp6I | GTAC | 8 cut(s) | 572, 806, 1245, 1485, 1793, 3113, 3176, 3222 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 913, 948, 1131, 1166 |
| CviQI | GTAC | 8 cut(s) | 572, 806, 1245, 1485, 1793, 3113, 3176, 3222 |
| DraI | TTTAAA | 1 cut(s) | 2899 |
| EaeI | YGGCCR | 1 cut(s) | 2748 |
| Eam1104I | CTCTTC | 5 cut(s) | 516, 777, 966, 1098, 2529 |
| EarI | CTCTTC | 5 cut(s) | 516, 777, 966, 1098, 2529 |
| Ecl136II | GAGCTC | 3 cut(s) | 82, 847, 1992 |
| Eco130I | CCWWGG | 2 cut(s) | 825, 2477 |
| Eco24I | GRGCYC | 4 cut(s) | 84, 849, 1994, 2834 |
| Eco31I | GGTCTC | 1 cut(s) | 3224 |
| Eco47I | GGWCC | 3 cut(s) | 377, 425, 781 |
| Eco47III | AGCGCT | 1 cut(s) | 2003 |
| Eco53kI | GAGCTC | 3 cut(s) | 82, 847, 1992 |
| Eco57I | CTGAAG | 5 cut(s) | 206, 753, 758, 885, 1332 |
| Eco81I | CCTNAGG | 1 cut(s) | 1200 |
| Eco88I | CYCGRG | 1 cut(s) | 1488 |
| Eco91I | GGTNACC | 1 cut(s) | 491 |
| EcoICRI | GAGCTC | 3 cut(s) | 82, 847, 1992 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3149 |
| EcoO109I | RGGNCCY | 2 cut(s) | 425, 781 |
| EcoO65I | GGTNACC | 1 cut(s) | 491 |
| EcoRI | GAATTC | 2 cut(s) | 556, 3119 |
| EcoRII | CCWGG | 1 cut(s) | 2330 |
| EcoT14I | CCWWGG | 2 cut(s) | 825, 2477 |
| EcoT22I | ATGCAT | 3 cut(s) | 1567, 2992, 3061 |
| EcoT38I | GRGCYC | 4 cut(s) | 84, 849, 1994, 2834 |
| ErhI | CCWWGG | 2 cut(s) | 825, 2477 |
| Esp3I | CGTCTC | 2 cut(s) | 105, 134 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 692, 724, 786, 818, 809, 841, 2409, 2441 |
| FaqI | GGGAC | 7 cut(s) | 411, 921, 1907, 1956, 2131, 2232, 3331 |
| FauI | CCCGC | 2 cut(s) | 571, 2821 |
| FbaI | TGATCA | 4 cut(s) | 934, 1092, 1162, 1449 |
| FblI | GTMKAC | 3 cut(s) | 1363, 2256, 2618 |
| Fnu4HI | GCNGC | 7 cut(s) | 392, 627, 1176, 1788, 1811, 2005, 2748 |
| FokI | GGATG | 9 cut(s) | 598, 1110, 1112, 1458, 1574, 2110, 2951, 3122, 3250 |
| FriOI | GRGCYC | 4 cut(s) | 84, 849, 1994, 2834 |
| Fsp4HI | GCNGC | 7 cut(s) | 392, 627, 1176, 1788, 1811, 2005, 2748 |
| FspBI | CTAG | 7 cut(s) | 542, 998, 1172, 1670, 2553, 2819, 3384 |
| GlaI | GCGC | 4 cut(s) | 587, 1469, 2003, 3395 |
| GluI | GCNGC | 7 cut(s) | 392, 627, 1176, 1788, 1811, 2005, 2748 |
| GsaI | CCCAGC | 1 cut(s) | 1059 |
| GsuI | CTGGAG | 3 cut(s) | 71, 1908, 2556 |
| HaeII | RGCGCY | 2 cut(s) | 1471, 2005 |
| HaeIII | GGCC | 5 cut(s) | 122, 1370, 1711, 2750, 3444 |
| HapII | CCGG | 2 cut(s) | 496, 1780 |
| HgaI | GACGC | 2 cut(s) | 1558, 3026 |
| HhaI | GCGC | 4 cut(s) | 588, 1470, 2004, 3396 |
| Hin6I | GCGC | 4 cut(s) | 586, 1468, 2002, 3394 |
| HinP1I | GCGC | 4 cut(s) | 586, 1468, 2002, 3394 |
| HincII | GTYRAC | 1 cut(s) | 2257 |
| HindII | GTYRAC | 1 cut(s) | 2257 |
| HpaII | CCGG | 2 cut(s) | 496, 1780 |
| Hpy99I | CGWCG | 4 cut(s) | 104, 450, 3042, 3045 |
| HpyCH4III | ACNGT | 2 cut(s) | 461, 1774 |
| HpyCH4IV | ACGT | 4 cut(s) | 6, 445, 512, 1528 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 1343, 2661, 2792, 2975, 3077, 3086, 3260 |
| HpySE526I | ACGT | 4 cut(s) | 6, 445, 512, 1528 |
| HspAI | GCGC | 4 cut(s) | 586, 1468, 2002, 3394 |
| KflI | GGGWCCC | 1 cut(s) | 425 |
| KpnI | GGTACC | 1 cut(s) | 3225 |
| Ksp22I | TGATCA | 4 cut(s) | 934, 1092, 1162, 1449 |
| Lsp1109I | GCAGC | 5 cut(s) | 613, 1162, 1774, 1797, 1991 |
| MabI | ACCWGGT | 1 cut(s) | 2330 |
| MaeI | CTAG | 7 cut(s) | 542, 998, 1172, 1670, 2553, 2819, 3384 |
| MaeII | ACGT | 4 cut(s) | 6, 445, 512, 1528 |
| MaeIII | GTNAC | 7 cut(s) | 337, 491, 526, 868, 1308, 2821, 3026 |
| MfeI | CAATTG | 3 cut(s) | 28, 1868, 2228 |
| MhlI | GDGCHC | 9 cut(s) | 84, 751, 834, 849, 1994, 2127, 2551, 2666, 2834 |
| MlyI | GAGTC | 7 cut(s) | 143, 362, 671, 1073, 2048, 3149, 3353 |
| MmeI | TCCRAC | 2 cut(s) | 171, 2748 |
| Mph1103I | ATGCAT | 3 cut(s) | 1567, 2992, 3061 |
| MroXI | GAANNNNTTC | 3 cut(s) | 771, 1704, 2112 |
| MseI | TTAA | 9 cut(s) | 456, 714, 786, 1007, 1515, 1964, 2694, 2898, 3389 |
| MslI | CAYNNNNRTG | 6 cut(s) | 565, 1650, 2049, 2732, 2978, 3419 |
| MspA1I | CMGCKG | 3 cut(s) | 391, 1997, 3341 |
| MspI | CCGG | 2 cut(s) | 496, 1780 |
| MspR9I | CCNGG | 2 cut(s) | 1781, 2332 |
| MunI | CAATTG | 3 cut(s) | 28, 1868, 2228 |
| Mva1269I | GAATGC | 2 cut(s) | 74, 3059 |
| MvaI | CCWGG | 1 cut(s) | 2332 |
| MvnI | CGCG | 1 cut(s) | 1431 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 1343, 2661, 2792, 2975, 3077, 3086, 3260 |
| NciI | CCSGG | 1 cut(s) | 1781 |
| NlaIV | GGNNCC | 7 cut(s) | 379, 426, 427, 2548, 2959, 3171, 3223 |
| NmuCI | GTSAC | 3 cut(s) | 526, 868, 3026 |
| NsiI | ATGCAT | 3 cut(s) | 1567, 2992, 3061 |
| NspI | RCATGY | 5 cut(s) | 570, 1569, 2255, 2670, 3424 |
| NspV | TTCGAA | 1 cut(s) | 519 |
| PaeI | GCATGC | 1 cut(s) | 1569 |
| PaeR7I | CTCGAG | 1 cut(s) | 1488 |
| PagI | TCATGA | 1 cut(s) | 694 |
| PciI | ACATGT | 1 cut(s) | 2666 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 96, 907 |
| PctI | GAATGC | 2 cut(s) | 74, 3059 |
| PdmI | GAANNNNTTC | 3 cut(s) | 771, 1704, 2112 |
| PfeI | GAWTC | 9 cut(s) | 329, 538, 767, 1493, 1724, 1763, 1901, 2325, 2366 |
| PfoI | TCCNGGA | 1 cut(s) | 1779 |
| PkrI | GCNGC | 7 cut(s) | 393, 628, 1177, 1789, 1812, 2006, 2749 |
| PleI | GAGTC | 7 cut(s) | 143, 361, 670, 1072, 2047, 3149, 3352 |
| PpsI | GAGTC | 7 cut(s) | 143, 361, 670, 1072, 2047, 3149, 3352 |
| PpuMI | RGGWCCY | 2 cut(s) | 425, 781 |
| PscI | ACATGT | 1 cut(s) | 2666 |
| PsiI | TTATAA | 2 cut(s) | 1556, 3200 |
| Psp124BI | GAGCTC | 3 cut(s) | 84, 849, 1994 |
| Psp5II | RGGWCCY | 2 cut(s) | 425, 781 |
| Psp6I | CCWGG | 1 cut(s) | 2330 |
| PspEI | GGTNACC | 1 cut(s) | 491 |
| PspFI | CCCAGC | 1 cut(s) | 1055 |
| PspGI | CCWGG | 1 cut(s) | 2330 |
| PspN4I | GGNNCC | 7 cut(s) | 379, 426, 427, 2548, 2959, 3171, 3223 |
| PspPI | GGNCC | 4 cut(s) | 377, 425, 781, 3442 |
| PspPPI | RGGWCCY | 2 cut(s) | 425, 781 |
| PstI | CTGCAG | 2 cut(s) | 990, 1930 |
| PstNI | CAGNNNCTG | 2 cut(s) | 341, 626 |
| PvuII | CAGCTG | 1 cut(s) | 3341 |
| RsaI | GTAC | 8 cut(s) | 573, 807, 1246, 1486, 1794, 3114, 3177, 3223 |
| RsaNI | GTAC | 8 cut(s) | 572, 806, 1245, 1485, 1793, 3113, 3176, 3222 |
| RseI | CAYNNNNRTG | 6 cut(s) | 565, 1650, 2049, 2732, 2978, 3419 |
| SacI | GAGCTC | 3 cut(s) | 84, 849, 1994 |
| SalI | GTCGAC | 1 cut(s) | 2255 |
| SaqAI | TTAA | 9 cut(s) | 456, 714, 786, 1007, 1515, 1964, 2694, 2898, 3389 |
| SatI | GCNGC | 7 cut(s) | 392, 627, 1176, 1788, 1811, 2005, 2748 |
| Sau96I | GGNCC | 4 cut(s) | 377, 425, 781, 3442 |
| ScaI | AGTACT | 2 cut(s) | 1246, 1486 |
| SchI | GAGTC | 7 cut(s) | 143, 362, 671, 1073, 2048, 3149, 3353 |
| ScrFI | CCNGG | 2 cut(s) | 1781, 2332 |
| SduI | GDGCHC | 9 cut(s) | 84, 751, 834, 849, 1994, 2127, 2551, 2666, 2834 |
| SexAI | ACCWGGT | 1 cut(s) | 2330 |
| SfcI | CTRYAG | 4 cut(s) | 618, 986, 1364, 1926 |
| Sfr274I | CTCGAG | 1 cut(s) | 1488 |
| SfuI | TTCGAA | 1 cut(s) | 519 |
| SinI | GGWCC | 3 cut(s) | 377, 425, 781 |
| SlaI | CTCGAG | 1 cut(s) | 1488 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 565, 1650, 2049, 2732, 2978, 3419 |
| SmlI | CTYRAG | 1 cut(s) | 1488 |
| SmoI | CTYRAG | 1 cut(s) | 1488 |
| SphI | GCATGC | 1 cut(s) | 1569 |
| SsiI | CCGC | 7 cut(s) | 391, 564, 1429, 1995, 2653, 2747, 2814 |
| SspI | AATATT | 4 cut(s) | 476, 1220, 1841, 2184 |
| SspMI | CTAG | 7 cut(s) | 542, 998, 1172, 1670, 2553, 2819, 3384 |
| SstI | GAGCTC | 3 cut(s) | 84, 849, 1994 |
| StyD4I | CCNGG | 2 cut(s) | 1779, 2330 |
| StyI | CCWWGG | 2 cut(s) | 825, 2477 |
| TaaI | ACNGT | 2 cut(s) | 461, 1774 |
| TaiI | ACGT | 4 cut(s) | 9, 448, 515, 1531 |
| TatI | WGTACW | 5 cut(s) | 805, 1244, 1484, 1792, 3175 |
| TauI | GCSGC | 2 cut(s) | 394, 2750 |
| TfiI | GAWTC | 9 cut(s) | 329, 538, 767, 1493, 1724, 1763, 1901, 2325, 2366 |
| Tru1I | TTAA | 9 cut(s) | 456, 714, 786, 1007, 1515, 1964, 2694, 2898, 3389 |
| Tru9I | TTAA | 9 cut(s) | 456, 714, 786, 1007, 1515, 1964, 2694, 2898, 3389 |
| TseFI | GTSAC | 3 cut(s) | 526, 868, 3026 |
| TseI | GCWGC | 5 cut(s) | 626, 1175, 1787, 1810, 2004 |
| Tsp45I | GTSAC | 3 cut(s) | 526, 868, 3026 |
| TspGWI | ACGGA | 5 cut(s) | 390, 1057, 1709, 2110, 3065 |
| VneI | GTGCAC | 3 cut(s) | 747, 2123, 2662 |
| VpaK11BI | GGWCC | 3 cut(s) | 377, 425, 781 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3149 |
| XapI | RAATTY | 7 cut(s) | 299, 556, 639, 1002, 1700, 3119, 3409 |
| XbaI | TCTAGA | 1 cut(s) | 541 |
| XceI | RCATGY | 5 cut(s) | 570, 1569, 2255, 2670, 3424 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2338 |
| XhoI | CTCGAG | 1 cut(s) | 1488 |
| XmiI | GTMKAC | 3 cut(s) | 1363, 2256, 2618 |
| XmnI | GAANNNNTTC | 3 cut(s) | 771, 1704, 2112 |
| XspI | CTAG | 7 cut(s) | 542, 998, 1172, 1670, 2553, 2819, 3384 |
| ZrmI | AGTACT | 2 cut(s) | 1246, 1486 |
| Zsp2I | ATGCAT | 3 cut(s) | 1567, 2992, 3061 |