FvH4_7g08900

Belongs to the ALG6 ALG8 glucosyltransferase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
8694782 .. 8700593
5812 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g08900.t2

Sequence Viewer

Length: 1548 bp
ATGGAACCACAAACCACCAAGAAGATTCTCAAAAACCCTTCAAAACCCAACAACCCCAAACTCTCAGAGCTATGGTGGTTCTTCGCCGCAGCCACCTGCCTCAAACTCCTCCTGATCCCAGCCTACAGAAGCACAGACTTCGAGGTCCACCGCCACTGGCTCGCCATAACCAACTCCCTCCCTCTCTCTCAATGGTACTCCGACGAGACCAGCCTCTGGACTCTTGACTACCCTCCCTTCTTTGCCTACTTCGAGCGCCTCCTCTCCCTCTTCGCTAATCTCATCGACCCACAAATTGTCCACCTCCACAACGGCCTCAACTACTCATCAGACACTGTTGTTTACTTTCAAAGAGTCTCGGTTTGTGTTTCGGATTTGTGTCTTTTGTTTGGGGTGTATAGGTTGACGAGGAGGTTGGATCATGTGAGAAGGAGAGTGATGTGGGTTTTGGTTGTTTGGTCGCCGATGTTGTTGATTGTGGACCATTTGCATTTTCAGTATAATGGGTTGTTGCTTGGGGTGTTGTTGGTTTCGGTTTCGTATTTGGAGGAAGGGAGGGACTTGATGGGTGGGTTTGTGTTTGCTGTTCTGTTGTGTTTTAAGCATTTGTTTGCGGTGGCGGCGCCTGTTTATTTTGTGTATTTGTTGAGGCATTATTGCTGGAAGGGATTGGTGAAGGGTTTTGGAAGGCTTTTGGTTATGGGGAGTGTCGTTGTGGCTGTTTTCACAGTGGCGTATGGTCCGTTTGTGTATCATGGGCAGATGAAACAAGTCATCCACCGCATGTTTCCTTTTGGCAGGGGACTTTGTCATGCATATTGGGCACCAAATTTTTGGGTGTTCTATATCTTACTAGATAAAGTGATAGCTTTCTTGCTTGGAAGACTTGGATTTAACATTCAGGCACCAGCAGCTTCATTTACCGGCGGACTAGTTGGTGATTCGTCCCCTTTTGCTGTATTGCCTCAGGCATGGAGAGATCCAAGACCAGTGATGATTACAAGATGGGTAGCCTATGCTTACACATGTGGGTTTCTGTTTGGGTGGCATGTTCATGAGAAGGCATCACTGCAGTTTGTCATCCCTCTTGCAATTGTTGCGGTGCAGGATTTGGATACTGCAAGGCATTACTTCTTTTTATCAATTGTGTCATGCTATTCTTTGTTCCCCCTTCTATATGAATCCCAGGAATATCCAATAAAGGTGCTGTTGCTATTACTACACTCCATGCTTATGTGGTTGGGTTTCTCTGCACAATTCACCAAGGATAAAACACTGGAAATGGCACCATCCGGAAAGAGGAAAGATAATCATATCGGATCAAACAGATCCACTGCAGCTGCCCAGAAAGGAGGCTTTGTTATTGGGTGGGAGATCTGGAGCTATCTGGTTGGTCTGGTACTTGTTGAGATTTGGGGCCAGTTTCTGCATCCTATGTTTCTCGGTGATAAGCTTCCTTTTCTACCCCTTATGCTGATCTCTGTATATTGTTCATTAGGGGTAACGTACTCTTTCCTTTGGCAATTAAAACAGATCCTTGTTTCATGA

Protein Analysis

516

Amino Acids

59.15

Weight (kDa)

9.16

Isoelectric Point (pI)

37.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Alg6_Alg8 PF03155 31 - 527 1.7e-160 ALG6, ALG8 glycosyltransferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 104
AasI GACNNNNNNGTC 1 cut(s) 143
Acc36I ACCTGC 1 cut(s) 104
AccB1I GGYRCC 4 cut(s) 622, 823, 904, 1285
AccB7I CCANNNNNTGG 1 cut(s) 216
AccIII TCCGGA 1 cut(s) 1292
AciI CCGC 7 cut(s) 87, 151, 614, 620, 781, 927, 1100
AclWI GGATC 6 cut(s) 109, 426, 974, 1323, 1327, 1528
AcsI RAATTY 1 cut(s) 829
AcyI GRCGYC 1 cut(s) 623
AfaI GTAC 3 cut(s) 197, 1401, 1508
AfiI CCNNNNNNNGG 2 cut(s) 216, 1299
AflIII ACRYGT 1 cut(s) 1025
AgsI TTSAA 2 cut(s) 42, 350
AhlI ACTAGT 1 cut(s) 931
AjnI CCWGG 1 cut(s) 1185
AluBI AGCT 6 cut(s) 70, 869, 914, 1340, 1383, 1453
AluI AGCT 6 cut(s) 70, 869, 914, 1340, 1383, 1453
Alw26I GTCTC 2 cut(s) 200, 361
AlwI GGATC 6 cut(s) 109, 426, 974, 1323, 1327, 1528
AlwNI CAGNNNCTG 3 cut(s) 216, 335, 1426
Aor13HI TCCGGA 1 cut(s) 1292
AoxI GGCC 2 cut(s) 313, 1417
ApeKI GCWGC 4 cut(s) 89, 911, 1337, 1340
ApoI RAATTY 1 cut(s) 829
AspLEI GCGC 2 cut(s) 258, 625
AspS9I GGNCC 4 cut(s) 145, 481, 740, 1417
AsuHPI GGTGA 4 cut(s) 685, 950, 1252, 1457
AvaII GGWCC 3 cut(s) 145, 481, 740
AxyI CCTNAGG 1 cut(s) 966
BaeGI GKGCMC 1 cut(s) 826
BanI GGYRCC 4 cut(s) 622, 823, 904, 1285
BbsI GAAGAC 1 cut(s) 889
BbvI GCAGC 4 cut(s) 101, 923, 1327, 1349
BccI CCATC 3 cut(s) 559, 999, 1297
BceAI ACGGC 1 cut(s) 328
BcgI CGANNNNNNTGC 2 cut(s) 121, 155
BciT130I CCWGG 1 cut(s) 1187
BciVI GTATCC 1 cut(s) 1108
BcoDI GTCTC 2 cut(s) 200, 361
BcuI ACTAGT 1 cut(s) 931
BfaI CTAG 2 cut(s) 854, 932
BfmI CTRYAG 3 cut(s) 124, 1070, 1335
BfoI RGCGCY 2 cut(s) 259, 626
BfuAI ACCTGC 1 cut(s) 104
BfuI GTATCC 1 cut(s) 1108
BglII AGATCT 1 cut(s) 1374
BisI GCNGC 6 cut(s) 87, 90, 621, 912, 1338, 1341
BlsI GCNGC 6 cut(s) 88, 91, 622, 913, 1339, 1342
Bme1390I CCNGG 1 cut(s) 1187
Bme18I GGWCC 3 cut(s) 145, 481, 740
BmgT120I GGNCC 4 cut(s) 145, 481, 740, 1417
BmiI GGNNCC 6 cut(s) 6, 624, 825, 906, 1287, 1418
BmrFI CCNGG 1 cut(s) 1187
BmsI GCATC 2 cut(s) 1073, 1438
BpiI GAAGAC 1 cut(s) 889
BpmI CTGGAG 1 cut(s) 1399
BsaHI GRCGYC 1 cut(s) 623
BsaI GGTCTC 1 cut(s) 200
BsaJI CCNNGG 2 cut(s) 1185, 1263
BsaWI WCCGGW 1 cut(s) 1292
BsaXI ACNNNNNCTCC 2 cut(s) 1344, 1374
Bsc4I CCNNNNNNNGG 2 cut(s) 216, 1299
Bse118I RCCGGY 1 cut(s) 923
Bse1I ACTGG 4 cut(s) 161, 989, 1281, 1420
Bse21I CCTNAGG 1 cut(s) 966
BseAI TCCGGA 1 cut(s) 1292
BseBI CCWGG 1 cut(s) 1187
BseDI CCNNGG 2 cut(s) 1185, 1263
BseGI GGATG 4 cut(s) 774, 1080, 1289, 1429
BseLI CCNNNNNNNGG 2 cut(s) 216, 1299
BseMII CTCAG 2 cut(s) 78, 980
BseNI ACTGG 4 cut(s) 161, 989, 1281, 1420
BseRI GAGGAG 3 cut(s) 98, 251, 424
BseSI GKGCMC 1 cut(s) 826
BseXI GCAGC 4 cut(s) 101, 923, 1327, 1349
BseYI CCCAGC 1 cut(s) 118
BsgI GTGCAG 2 cut(s) 1124, 1236
BshFI GGCC 2 cut(s) 315, 1419
BshNI GGYRCC 4 cut(s) 622, 823, 904, 1285
BsiSI CCGG 2 cut(s) 924, 1293
BslFI GGGAC 3 cut(s) 572, 816, 931
BslI CCNNNNNNNGG 2 cut(s) 216, 1299
BsmAI GTCTC 2 cut(s) 200, 361
BsmFI GGGAC 3 cut(s) 572, 816, 931
BsnI GGCC 2 cut(s) 315, 1419
Bso31I GGTCTC 1 cut(s) 200
Bsp1286I GDGCHC 1 cut(s) 826
Bsp13I TCCGGA 1 cut(s) 1292
Bsp143I GATC 8 cut(s) 114, 418, 979, 1319, 1328, 1374, 1476, 1533
BspACI CCGC 7 cut(s) 87, 151, 614, 620, 781, 927, 1100
BspANI GGCC 2 cut(s) 315, 1419
BspCNI CTCAG 2 cut(s) 77, 979
BspEI TCCGGA 1 cut(s) 1292
BspHI TCATGA 2 cut(s) 1054, 1544
BspLI GGNNCC 6 cut(s) 6, 624, 825, 906, 1287, 1418
BspMAI CTGCAG 2 cut(s) 1074, 1339
BspMI ACCTGC 1 cut(s) 104
BspPI GGATC 6 cut(s) 109, 426, 974, 1323, 1327, 1528
BspT107I GGYRCC 4 cut(s) 622, 823, 904, 1285
BspTNI GGTCTC 1 cut(s) 200
BsrFI RCCGGY 1 cut(s) 923
BsrI ACTGG 4 cut(s) 161, 989, 1281, 1420
BssAI RCCGGY 1 cut(s) 923
BssECI CCNNGG 2 cut(s) 1185, 1263
BssMI GATC 8 cut(s) 114, 418, 979, 1319, 1328, 1374, 1476, 1533
BssNI GRCGYC 1 cut(s) 623
BssT1I CCWWGG 1 cut(s) 1263
Bst2UI CCWGG 1 cut(s) 1187
Bst4CI ACNGT 2 cut(s) 337, 730
Bst6I CTCTTC 1 cut(s) 275
BstACI GRCGYC 1 cut(s) 623
BstAPI GCANNNNNTGC 1 cut(s) 1097
BstC8I GCNNGC 1 cut(s) 162
BstDEI CTNAG 2 cut(s) 64, 966
BstF5I GGATG 4 cut(s) 774, 1080, 1289, 1429
BstH2I RGCGCY 2 cut(s) 259, 626
BstHHI GCGC 2 cut(s) 258, 625
BstKTI GATC 8 cut(s) 117, 421, 982, 1322, 1331, 1377, 1479, 1536
BstMAI GTCTC 2 cut(s) 200, 361
BstMBI GATC 8 cut(s) 114, 418, 979, 1319, 1328, 1374, 1476, 1533
BstMWI GCNNNNNNNGC 4 cut(s) 620, 821, 911, 1097
BstNI CCWGG 1 cut(s) 1187
BstNSI RCATGY 3 cut(s) 787, 1029, 1052
BstSCI CCNGG 1 cut(s) 1185
BstSFI CTRYAG 3 cut(s) 124, 1070, 1335
BstSLI GKGCMC 1 cut(s) 826
BstV1I GCAGC 4 cut(s) 101, 923, 1327, 1349
BstV2I GAAGAC 1 cut(s) 889
BstX2I RGATCY 4 cut(s) 979, 1328, 1374, 1533
BstXI CCANNNNNNTGG 1 cut(s) 834
BstYI RGATCY 4 cut(s) 979, 1328, 1374, 1533
Bsu36I CCTNAGG 1 cut(s) 966
BsuI GTATCC 1 cut(s) 1108
BsuRI GGCC 2 cut(s) 315, 1419
BtsCI GGATG 4 cut(s) 774, 1080, 1289, 1429
BtsI GCAGTG 2 cut(s) 1067, 1332
BtsIMutI CAGTG 7 cut(s) 154, 333, 735, 996, 1067, 1274, 1332
BveI ACCTGC 1 cut(s) 104
Cac8I GCNNGC 1 cut(s) 162
CaiI CAGNNNCTG 3 cut(s) 216, 335, 1426
CciI TCATGA 2 cut(s) 1054, 1544
CfoI GCGC 2 cut(s) 258, 625
Cfr10I RCCGGY 1 cut(s) 923
Cfr13I GGNCC 4 cut(s) 145, 481, 740, 1417
Csp6I GTAC 3 cut(s) 196, 1400, 1507
CviQI GTAC 3 cut(s) 196, 1400, 1507
DdeI CTNAG 2 cut(s) 64, 966
DinI GGCGCC 1 cut(s) 624
DpnI GATC 8 cut(s) 116, 420, 981, 1321, 1330, 1376, 1478, 1535
DpnII GATC 8 cut(s) 114, 418, 979, 1319, 1328, 1374, 1476, 1533
DrdI GACNNNNNNGTC 1 cut(s) 143
DseDI GACNNNNNNGTC 1 cut(s) 143
Eam1104I CTCTTC 1 cut(s) 275
EarI CTCTTC 1 cut(s) 275
EciI GGCGGA 1 cut(s) 942
Eco130I CCWWGG 1 cut(s) 1263
Eco31I GGTCTC 1 cut(s) 200
Eco47I GGWCC 3 cut(s) 145, 481, 740
Eco81I CCTNAGG 1 cut(s) 966
EcoRII CCWGG 1 cut(s) 1185
EcoT14I CCWWGG 1 cut(s) 1263
EcoT22I ATGCAT 1 cut(s) 817
EgeI GGCGCC 1 cut(s) 624
EheI GGCGCC 1 cut(s) 624
ErhI CCWWGG 1 cut(s) 1263
FaqI GGGAC 3 cut(s) 572, 816, 931
Fnu4HI GCNGC 6 cut(s) 87, 90, 621, 912, 1338, 1341
FokI GGATG 4 cut(s) 761, 1067, 1276, 1416
Fsp4HI GCNGC 6 cut(s) 87, 90, 621, 912, 1338, 1341
FspBI CTAG 2 cut(s) 854, 932
GlaI GCGC 2 cut(s) 257, 624
GluI GCNGC 6 cut(s) 87, 90, 621, 912, 1338, 1341
GsaI CCCAGC 1 cut(s) 122
GsuI CTGGAG 1 cut(s) 1399
HaeII RGCGCY 2 cut(s) 259, 626
HaeIII GGCC 2 cut(s) 315, 1419
HapII CCGG 2 cut(s) 924, 1293
HhaI GCGC 2 cut(s) 258, 625
Hin1I GRCGYC 1 cut(s) 623
Hin6I GCGC 2 cut(s) 256, 623
HinP1I GCGC 2 cut(s) 256, 623
HincII GTYRAC 1 cut(s) 405
HindII GTYRAC 1 cut(s) 405
HindIII AAGCTT 1 cut(s) 1451
HinfI GANTC 5 cut(s) 25, 220, 354, 941, 1181
HpaII CCGG 2 cut(s) 924, 1293
HphI GGTGA 4 cut(s) 685, 950, 1252, 1457
Hpy166II GTNNAC 5 cut(s) 148, 301, 343, 405, 481
Hpy188I TCNGA 5 cut(s) 67, 202, 331, 373, 1319
Hpy188III TCNNGA 7 cut(s) 112, 217, 224, 1055, 1293, 1378, 1545
Hpy8I GTNNAC 5 cut(s) 148, 301, 343, 405, 481
Hpy99I CGWCG 1 cut(s) 206
HpyAV CCTTC 9 cut(s) 48, 247, 423, 545, 658, 670, 681, 1054, 1181
HpyCH4III ACNGT 2 cut(s) 337, 730
HpyCH4IV ACGT 1 cut(s) 1505
HpyCH4V TGCA 9 cut(s) 490, 815, 1072, 1091, 1105, 1121, 1253, 1337, 1429
HpyF10VI GCNNNNNNNGC 4 cut(s) 620, 821, 911, 1097
HpyF3I CTNAG 2 cut(s) 64, 966
HpySE526I ACGT 1 cut(s) 1505
Hsp92I GRCGYC 1 cut(s) 623
HspAI GCGC 2 cut(s) 256, 623
KasI GGCGCC 1 cut(s) 622
Kpn2I TCCGGA 1 cut(s) 1292
Kzo9I GATC 8 cut(s) 114, 418, 979, 1319, 1328, 1374, 1476, 1533
LmnI GCTCC 1 cut(s) 1380
Lsp1109I GCAGC 4 cut(s) 101, 923, 1327, 1349
LweI GCATC 2 cut(s) 1073, 1438
MaeI CTAG 2 cut(s) 854, 932
MaeII ACGT 1 cut(s) 1505
MaeIII GTNAC 1 cut(s) 1501
MalI GATC 8 cut(s) 116, 420, 981, 1321, 1330, 1376, 1478, 1535
MboI GATC 8 cut(s) 114, 418, 979, 1319, 1328, 1374, 1476, 1533
MboII GAAGA 4 cut(s) 34, 73, 262, 894
MfeI CAATTG 2 cut(s) 1092, 1143
MflI RGATCY 4 cut(s) 979, 1328, 1374, 1533
MhlI GDGCHC 1 cut(s) 826
MluCI AATT 6 cut(s) 294, 829, 1092, 1143, 1256, 1523
Mly113I GGCGCC 1 cut(s) 623
MlyI GAGTC 2 cut(s) 214, 363
MmeI TCCRAC 2 cut(s) 225, 396
Mph1103I ATGCAT 1 cut(s) 817
MroI TCCGGA 1 cut(s) 1292
MseI TTAA 3 cut(s) 600, 894, 1526
MslI CAYNNNNRTG 2 cut(s) 1053, 1232
MspA1I CMGCKG 1 cut(s) 1340
MspI CCGG 2 cut(s) 924, 1293
MspR9I CCNGG 1 cut(s) 1187
MunI CAATTG 2 cut(s) 1092, 1143
MvaI CCWGG 1 cut(s) 1187
MwoI GCNNNNNNNGC 4 cut(s) 620, 821, 911, 1097
NarI GGCGCC 1 cut(s) 623
NdeII GATC 8 cut(s) 114, 418, 979, 1319, 1328, 1374, 1476, 1533
NlaIV GGNNCC 6 cut(s) 6, 624, 825, 906, 1287, 1418
NsiI ATGCAT 1 cut(s) 817
NspI RCATGY 3 cut(s) 787, 1029, 1052
PagI TCATGA 2 cut(s) 1054, 1544
PaqCI CACCTGC 1 cut(s) 104
PciI ACATGT 1 cut(s) 1025
PfeI GAWTC 3 cut(s) 25, 941, 1181
PflFI GACNNNGTC 1 cut(s) 807
PflMI CCANNNNNTGG 1 cut(s) 216
PkrI GCNGC 6 cut(s) 88, 91, 622, 913, 1339, 1342
PleI GAGTC 2 cut(s) 214, 362
PluTI GGCGCC 1 cut(s) 626
PpsI GAGTC 2 cut(s) 214, 362
PscI ACATGT 1 cut(s) 1025
Psp6I CCWGG 1 cut(s) 1185
PspFI CCCAGC 1 cut(s) 118
PspGI CCWGG 1 cut(s) 1185
PspN4I GGNNCC 6 cut(s) 6, 624, 825, 906, 1287, 1418
PspPI GGNCC 4 cut(s) 145, 481, 740, 1417
PstI CTGCAG 2 cut(s) 1074, 1339
PstNI CAGNNNCTG 3 cut(s) 216, 335, 1426
PsuI RGATCY 4 cut(s) 979, 1328, 1374, 1533
PsyI GACNNNGTC 1 cut(s) 807
PvuII CAGCTG 1 cut(s) 1340
RsaI GTAC 3 cut(s) 197, 1401, 1508
RsaNI GTAC 3 cut(s) 196, 1400, 1507
RseI CAYNNNNRTG 2 cut(s) 1053, 1232
SaqAI TTAA 3 cut(s) 600, 894, 1526
SatI GCNGC 6 cut(s) 87, 90, 621, 912, 1338, 1341
Sau3AI GATC 8 cut(s) 114, 418, 979, 1319, 1328, 1374, 1476, 1533
Sau96I GGNCC 4 cut(s) 145, 481, 740, 1417
SchI GAGTC 2 cut(s) 214, 363
ScrFI CCNGG 1 cut(s) 1187
SduI GDGCHC 1 cut(s) 826
SfaNI GCATC 2 cut(s) 1073, 1438
SfcI CTRYAG 3 cut(s) 124, 1070, 1335
SfoI GGCGCC 1 cut(s) 624
SinI GGWCC 3 cut(s) 145, 481, 740
SmiMI CAYNNNNRTG 2 cut(s) 1053, 1232
SpeI ACTAGT 1 cut(s) 931
Sse9I AATT 6 cut(s) 294, 829, 1092, 1143, 1256, 1523
SsiI CCGC 7 cut(s) 87, 151, 614, 620, 781, 927, 1100
SspDI GGCGCC 1 cut(s) 622
SspMI CTAG 2 cut(s) 854, 932
StyD4I CCNGG 1 cut(s) 1185
StyI CCWWGG 1 cut(s) 1263
TaaI ACNGT 2 cut(s) 337, 730
TaiI ACGT 1 cut(s) 1508
TaqI TCGA 3 cut(s) 141, 252, 285
TasI AATT 6 cut(s) 294, 829, 1092, 1143, 1256, 1523
TauI GCSGC 2 cut(s) 89, 623
TfiI GAWTC 3 cut(s) 25, 941, 1181
Tru1I TTAA 3 cut(s) 600, 894, 1526
Tru9I TTAA 3 cut(s) 600, 894, 1526
TscAI CASTG 7 cut(s) 161, 340, 735, 996, 1074, 1281, 1339
TseI GCWGC 4 cut(s) 89, 911, 1337, 1340
TspDTI ATGAA 6 cut(s) 779, 906, 1043, 1194, 1482, 1533
TspGWI ACGGA 1 cut(s) 732
TspRI CASTG 7 cut(s) 161, 340, 735, 996, 1074, 1281, 1339
Tth111I GACNNNGTC 1 cut(s) 807
Van91I CCANNNNNTGG 1 cut(s) 216
VpaK11BI GGWCC 3 cut(s) 145, 481, 740
XapI RAATTY 1 cut(s) 829
XceI RCATGY 3 cut(s) 787, 1029, 1052
XspI CTAG 2 cut(s) 854, 932
Zsp2I ATGCAT 1 cut(s) 817
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.