MD02G1223000.v1.1

Belongs to the ALG6 ALG8 glucosyltransferase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Reverse (-)
26019327 .. 26023609
4283 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1223000.v1.1.491

Sequence Viewer

Length: 1605 bp
ATGGAAGCTCAAACCGCCCCGAAACTTCAAAACCCTCCGAAACCCCGCAACCCCATCACAGAGCTATGGTGGTTCTTCGCCATCTCCGCCTGCGTAAAGCTGCTTCTGATCCCAGCCTACAAAAGCACAGACTTTGAGGTCCACCGCCACTGGCTAGCCATAACCCACTCTCTCCCTCTCTCCCAATGGTACTCCGACGAGACGAGCATTTGGACCCTCGACTACCCGCCATTCTTCGCCTACTTCGAGCGATTACTTTCCGTTTTCGCCAATCTCATCGACCCACAAATCGTTCACCTCCAAAAGGGCTTGAACTACAGCTCAAACACAGTGCTTTACTTCCAAAGAATCTCTGTAATCTTATCGGATTTGTGCCTTTTGTATGGGGTTTTTCGATTGACTAGGAATTCGGATTCGATGAAGCAAAAGATGATCTGGGTATTGGTGATTTGGTCGCCAATGCTTGTGATTGTGGACCATTTGCATTTCCAGTACAATGGGTTTTTGCTTGGGATTTTATTGATTTCGCTTTCATGTTTGGAGGAAGGGAGGGACTTGATGGGTGGGCTTATTTTTGCTGTGCTATTGTGCTTCAAGCATTTGTTTGCGGTCGCGGCGCCTGTTTATTTTGTTTACTTGTTGAGGCATTATTGCTGGAAAGGATTGGTGAGGGGTTTCTGGCGGCTTTCGGTTTTGGGGACTGTTGTTGTGGCTGTTTTTGCATTGGCATATGCCCCATTTGTGTACCATGGGCAGATGCAACAAGTTATCCACCGCATGTTTCCTTTTGGCAGGGGACTTTGCCATGCCTATTGGGCACCGAATTTTTGGGTGTTCTATATCATACTGGATAAAGTGCTTGCTTTCTTGCTTGGAAGACTTGGATTCAACATTCAAGCCCCAGCGGCTTCATTCACTGGTGGGCTAGTTGGGGATTCATCTCCTTTTGCTGTACTACCTCAGGTCACTCCTGCGACAACCTTTATTCTGGTTCTGATTTCCTTATCCCCTTGTCTCATTAAAGCTTGGAGACATCCACGACCATCGTTGATTACCAGATGGGTAGCCTATGCATATACTTGTGGGTTTATGTTTGGGTGGCACGTTCATGAGAAGGCATCACTCCACTTTGTCATCCCCCTTGCCATTGTTGCAGTGCAGAGTTTGGATAATGCAAGGCATTACTTCTTGATATCAATTGTGTCCTGCTACTCACTGTTCCCACTTCTATATGAAGCCCAGGAGTATCCAATAAGGGTCCTATTGCTGTTACTACACTCCACGCTTATGTGGTTAGGTTTCTCTGCACAATTCGCTAACGGGATTGCCCTTGAAACGGCAAACTCTGGAAAGAAAAAAGATGATGATTTTCAAACGAAGAGACGTTCTGTTGCAGCTGCCCAGAAAGGAGGGTTTGTTATTGGGTGCGTTCACTGGAGTTATTTGGTTGGTATGTTGCTGGTTGAGATTTGGGGTCAGTTTCTGCATCCCATCATTTTTGGTGAAAAGCTTCCTTTTATACCCCTCATGCTTATCTCAACATACTGTGGAATAGGGGTCATGTACTCTTTCATTTGGCAATTAAAATGGATCCTTGATTCGTGA

Protein Analysis

535

Amino Acids

61.06

Weight (kDa)

9.04

Isoelectric Point (pI)

37.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Alg6_Alg8 PF03155 30 - 526 5.5e-162 ALG6, ALG8 glycosyltransferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 137
AccB1I GGYRCC 2 cut(s) 616, 817
AccII CGCG 1 cut(s) 614
AclWI GGATC 3 cut(s) 103, 1585, 1598
AcsI RAATTY 2 cut(s) 406, 823
AcyI GRCGYC 1 cut(s) 617
AfaI GTAC 5 cut(s) 191, 494, 746, 954, 1565
AfiI CCNNNNNNNGG 2 cut(s) 304, 1336
AgsI TTSAA 7 cut(s) 29, 313, 595, 889, 896, 1334, 1373
AjnI CCWGG 1 cut(s) 1239
AluBI AGCT 7 cut(s) 8, 64, 100, 321, 1025, 1397, 1510
AluI AGCT 7 cut(s) 8, 64, 100, 321, 1025, 1397, 1510
Alw26I GTCTC 4 cut(s) 194, 1019, 1024, 1375
AlwI GGATC 3 cut(s) 103, 1585, 1598
AlwNI CAGNNNCTG 1 cut(s) 1483
ApeKI GCWGC 3 cut(s) 100, 1394, 1397
ApoI RAATTY 2 cut(s) 406, 823
ArsI GACNNNNNNTTYG 2 cut(s) 391, 423
Asp700I GAANNNNTTC 1 cut(s) 1509
AspLEI GCGC 1 cut(s) 619
AspS9I GGNCC 4 cut(s) 139, 213, 475, 1258
AsuHPI GGTGA 4 cut(s) 287, 457, 679, 1514
AsuNHI GCTAGC 1 cut(s) 154
AvaII GGWCC 4 cut(s) 139, 213, 475, 1258
AxyI CCTNAGG 1 cut(s) 960
BaeGI GKGCMC 1 cut(s) 820
BamHI GGATCC 1 cut(s) 1590
BanI GGYRCC 2 cut(s) 616, 817
BarI GAAGNNNNNNTAC 2 cut(s) 87, 119
BbsI GAAGAC 1 cut(s) 883
BbvI GCAGC 3 cut(s) 87, 1384, 1406
BccI CCATC 6 cut(s) 62, 89, 553, 1051, 1053, 1499
BceAI ACGGC 1 cut(s) 1353
BciT130I CCWGG 1 cut(s) 1241
BciVI GTATCC 1 cut(s) 1257
BcoDI GTCTC 4 cut(s) 194, 1019, 1024, 1375
BfaI CTAG 3 cut(s) 155, 402, 926
BfmI CTRYAG 1 cut(s) 316
BfoI RGCGCY 1 cut(s) 620
BfuI GTATCC 1 cut(s) 1257
BglI GCCNNNNNGGC 2 cut(s) 815, 905
BisI GCNGC 6 cut(s) 101, 615, 683, 906, 1395, 1398
BlsI GCNGC 6 cut(s) 102, 616, 684, 907, 1396, 1399
Bme1390I CCNGG 1 cut(s) 1241
Bme18I GGWCC 4 cut(s) 139, 213, 475, 1258
BmgT120I GGNCC 4 cut(s) 139, 213, 475, 1258
BmiI GGNNCC 5 cut(s) 215, 618, 819, 1259, 1592
BmrFI CCNGG 1 cut(s) 1241
BmsI GCATC 3 cut(s) 747, 1127, 1495
BmtI GCTAGC 1 cut(s) 158
BpiI GAAGAC 1 cut(s) 883
BpmI CTGGAG 1 cut(s) 1456
BsaHI GRCGYC 1 cut(s) 617
BsaJI CCNNGG 2 cut(s) 748, 1239
BsaXI ACNNNNNCTCC 2 cut(s) 1401, 1431
Bsc4I CCNNNNNNNGG 2 cut(s) 304, 1336
Bse1I ACTGG 5 cut(s) 155, 490, 852, 922, 1439
Bse21I CCTNAGG 1 cut(s) 960
BseBI CCWGG 1 cut(s) 1241
BseDI CCNNGG 2 cut(s) 748, 1239
BseGI GGATG 3 cut(s) 1033, 1134, 1486
BseLI CCNNNNNNNGG 2 cut(s) 304, 1336
BseMII CTCAG 1 cut(s) 974
BseNI ACTGG 5 cut(s) 155, 490, 852, 922, 1439
BseSI GKGCMC 1 cut(s) 820
BseXI GCAGC 3 cut(s) 87, 1384, 1406
BseYI CCCAGC 2 cut(s) 112, 901
BsgI GTGCAG 2 cut(s) 1178, 1290
Bsh1236I CGCG 1 cut(s) 614
Bsh1285I CGRYCG 1 cut(s) 612
BshNI GGYRCC 2 cut(s) 616, 817
BsiEI CGRYCG 1 cut(s) 612
BslFI GGGAC 3 cut(s) 566, 712, 810
BslI CCNNNNNNNGG 2 cut(s) 304, 1336
BsmAI GTCTC 4 cut(s) 194, 1019, 1024, 1375
BsmBI CGTCTC 2 cut(s) 194, 1375
BsmFI GGGAC 3 cut(s) 566, 712, 810
Bsp1286I GDGCHC 1 cut(s) 820
Bsp143I GATC 3 cut(s) 108, 432, 1590
Bsp19I CCATGG 1 cut(s) 748
BspCNI CTCAG 1 cut(s) 973
BspFNI CGCG 1 cut(s) 614
BspHI TCATGA 1 cut(s) 1108
BspLI GGNNCC 5 cut(s) 215, 618, 819, 1259, 1592
BspOI GCTAGC 1 cut(s) 158
BspPI GGATC 3 cut(s) 103, 1585, 1598
BspT107I GGYRCC 2 cut(s) 616, 817
BsrI ACTGG 5 cut(s) 155, 490, 852, 922, 1439
BssECI CCNNGG 2 cut(s) 748, 1239
BssMI GATC 3 cut(s) 108, 432, 1590
BssNI GRCGYC 1 cut(s) 617
BssT1I CCWWGG 1 cut(s) 748
Bst2UI CCWGG 1 cut(s) 1241
Bst4CI ACNGT 4 cut(s) 331, 703, 1218, 1547
Bst6I CTCTTC 1 cut(s) 1373
BstACI GRCGYC 1 cut(s) 617
BstC8I GCNNGC 3 cut(s) 91, 156, 861
BstDEI CTNAG 1 cut(s) 960
BstDSI CCRYGG 1 cut(s) 748
BstENI CCTNNNNNAGG 1 cut(s) 302
BstF5I GGATG 3 cut(s) 1033, 1134, 1486
BstFNI CGCG 1 cut(s) 614
BstH2I RGCGCY 1 cut(s) 620
BstHHI GCGC 1 cut(s) 619
BstKTI GATC 3 cut(s) 111, 435, 1593
BstMAI GTCTC 4 cut(s) 194, 1019, 1024, 1375
BstMBI GATC 3 cut(s) 108, 432, 1590
BstMCI CGRYCG 1 cut(s) 612
BstMWI GCNNNNNNNGC 8 cut(s) 14, 86, 614, 719, 815, 905, 1151, 1313
BstNI CCWGG 1 cut(s) 1241
BstNSI RCATGY 1 cut(s) 781
BstSCI CCNGG 1 cut(s) 1239
BstSFI CTRYAG 1 cut(s) 316
BstSLI GKGCMC 1 cut(s) 820
BstUI CGCG 1 cut(s) 614
BstV1I GCAGC 3 cut(s) 87, 1384, 1406
BstV2I GAAGAC 1 cut(s) 883
BstX2I RGATCY 1 cut(s) 1590
BstXI CCANNNNNNTGG 1 cut(s) 497
BstYI RGATCY 1 cut(s) 1590
Bsu36I CCTNAGG 1 cut(s) 960
BsuI GTATCC 1 cut(s) 1257
BtgI CCRYGG 1 cut(s) 748
BtsCI GGATG 3 cut(s) 1033, 1134, 1486
BtsI GCAGTG 1 cut(s) 1161
BtsIMutI CAGTG 6 cut(s) 148, 336, 915, 1161, 1214, 1432
Cac8I GCNNGC 3 cut(s) 91, 156, 861
CaiI CAGNNNCTG 1 cut(s) 1483
CciI TCATGA 1 cut(s) 1108
CfoI GCGC 1 cut(s) 619
Cfr13I GGNCC 4 cut(s) 139, 213, 475, 1258
Csp6I GTAC 5 cut(s) 190, 493, 745, 953, 1564
CviAII CATG 7 cut(s) 534, 749, 778, 806, 1109, 1528, 1561
CviQI GTAC 5 cut(s) 190, 493, 745, 953, 1564
DdeI CTNAG 1 cut(s) 960
DinI GGCGCC 1 cut(s) 618
DpnI GATC 3 cut(s) 110, 434, 1592
DpnII GATC 3 cut(s) 108, 432, 1590
DrdI GACNNNNNNGTC 1 cut(s) 137
DseDI GACNNNNNNGTC 1 cut(s) 137
Eam1104I CTCTTC 1 cut(s) 1373
EarI CTCTTC 1 cut(s) 1373
EciI GGCGGA 1 cut(s) 76
Eco130I CCWWGG 1 cut(s) 748
Eco32I GATATC 1 cut(s) 1194
Eco47I GGWCC 4 cut(s) 139, 213, 475, 1258
Eco81I CCTNAGG 1 cut(s) 960
EcoNI CCTNNNNNAGG 1 cut(s) 302
EcoO109I RGGNCCY 1 cut(s) 1258
EcoRI GAATTC 1 cut(s) 406
EcoRII CCWGG 1 cut(s) 1239
EcoRV GATATC 1 cut(s) 1194
EcoT14I CCWWGG 1 cut(s) 748
EcoT22I ATGCAT 1 cut(s) 1075
EgeI GGCGCC 1 cut(s) 618
EheI GGCGCC 1 cut(s) 618
ErhI CCWWGG 1 cut(s) 748
Esp3I CGTCTC 2 cut(s) 194, 1375
FaeI CATG 7 cut(s) 537, 752, 781, 809, 1112, 1531, 1564
FaqI GGGAC 3 cut(s) 566, 712, 810
FatI CATG 7 cut(s) 533, 748, 777, 805, 1108, 1527, 1560
FauI CCCGC 2 cut(s) 53, 234
FauNDI CATATG 1 cut(s) 730
Fnu4HI GCNGC 6 cut(s) 101, 615, 683, 906, 1395, 1398
FokI GGATG 3 cut(s) 1020, 1121, 1473
Fsp4HI GCNGC 6 cut(s) 101, 615, 683, 906, 1395, 1398
FspBI CTAG 3 cut(s) 155, 402, 926
GlaI GCGC 1 cut(s) 618
GluI GCNGC 6 cut(s) 101, 615, 683, 906, 1395, 1398
GsaI CCCAGC 2 cut(s) 116, 905
GsuI CTGGAG 1 cut(s) 1456
HaeII RGCGCY 1 cut(s) 620
HhaI GCGC 1 cut(s) 619
Hin1I GRCGYC 1 cut(s) 617
Hin1II CATG 7 cut(s) 537, 752, 781, 809, 1112, 1531, 1564
Hin6I GCGC 1 cut(s) 617
HinP1I GCGC 1 cut(s) 617
HindIII AAGCTT 2 cut(s) 1023, 1508
HinfI GANTC 5 cut(s) 348, 413, 885, 935, 1598
HphI GGTGA 4 cut(s) 287, 457, 679, 1514
Hpy166II GTNNAC 6 cut(s) 142, 295, 475, 634, 745, 1432
Hpy188I TCNGA 6 cut(s) 39, 108, 196, 367, 412, 996
Hpy188III TCNNGA 4 cut(s) 1109, 1189, 1347, 1602
Hpy8I GTNNAC 6 cut(s) 142, 295, 475, 634, 745, 1432
Hpy99I CGWCG 1 cut(s) 200
HpyAV CCTTC 2 cut(s) 539, 1108
HpyCH4III ACNGT 4 cut(s) 331, 703, 1218, 1547
HpyCH4IV ACGT 2 cut(s) 1104, 1384
HpyF10VI GCNNNNNNNGC 8 cut(s) 14, 86, 614, 719, 815, 905, 1151, 1313
HpyF3I CTNAG 1 cut(s) 960
HpySE526I ACGT 2 cut(s) 1104, 1384
Hsp92I GRCGYC 1 cut(s) 617
Hsp92II CATG 7 cut(s) 537, 752, 781, 809, 1112, 1531, 1564
HspAI GCGC 1 cut(s) 617
KasI GGCGCC 1 cut(s) 616
Kzo9I GATC 3 cut(s) 108, 432, 1590
Lsp1109I GCAGC 3 cut(s) 87, 1384, 1406
LweI GCATC 3 cut(s) 747, 1127, 1495
MaeI CTAG 3 cut(s) 155, 402, 926
MaeII ACGT 2 cut(s) 1104, 1384
MaeIII GTNAC 2 cut(s) 964, 1269
MalI GATC 3 cut(s) 110, 434, 1592
MboI GATC 3 cut(s) 108, 432, 1590
MboII GAAGA 4 cut(s) 67, 226, 888, 1390
MfeI CAATTG 1 cut(s) 1197
MflI RGATCY 1 cut(s) 1590
MhlI GDGCHC 1 cut(s) 820
MluCI AATT 5 cut(s) 406, 823, 1197, 1310, 1580
Mly113I GGCGCC 1 cut(s) 617
MmeI TCCRAC 1 cut(s) 219
Mph1103I ATGCAT 1 cut(s) 1075
MroXI GAANNNNTTC 1 cut(s) 1509
MseI TTAA 2 cut(s) 1020, 1583
MslI CAYNNNNRTG 2 cut(s) 1107, 1286
MspA1I CMGCKG 2 cut(s) 905, 1397
MspR9I CCNGG 1 cut(s) 1241
MunI CAATTG 1 cut(s) 1197
MvaI CCWGG 1 cut(s) 1241
MvnI CGCG 1 cut(s) 614
MwoI GCNNNNNNNGC 8 cut(s) 14, 86, 614, 719, 815, 905, 1151, 1313
NarI GGCGCC 1 cut(s) 617
NcoI CCATGG 1 cut(s) 748
NdeI CATATG 1 cut(s) 730
NdeII GATC 3 cut(s) 108, 432, 1590
NheI GCTAGC 1 cut(s) 154
NlaIII CATG 7 cut(s) 537, 752, 781, 809, 1112, 1531, 1564
NlaIV GGNNCC 5 cut(s) 215, 618, 819, 1259, 1592
NmuCI GTSAC 1 cut(s) 964
NsiI ATGCAT 1 cut(s) 1075
NspI RCATGY 1 cut(s) 781
PagI TCATGA 1 cut(s) 1108
PcsI WCGNNNNNNNCGW 1 cut(s) 243
PdmI GAANNNNTTC 1 cut(s) 1509
PfeI GAWTC 5 cut(s) 348, 413, 885, 935, 1598
PkrI GCNGC 6 cut(s) 102, 616, 684, 907, 1396, 1399
PluTI GGCGCC 1 cut(s) 620
PpuMI RGGWCCY 1 cut(s) 1258
Psp5II RGGWCCY 1 cut(s) 1258
Psp6I CCWGG 1 cut(s) 1239
PspFI CCCAGC 2 cut(s) 112, 901
PspGI CCWGG 1 cut(s) 1239
PspN4I GGNNCC 5 cut(s) 215, 618, 819, 1259, 1592
PspPI GGNCC 4 cut(s) 139, 213, 475, 1258
PspPPI RGGWCCY 1 cut(s) 1258
PstNI CAGNNNCTG 1 cut(s) 1483
PsuI RGATCY 1 cut(s) 1590
PvuII CAGCTG 1 cut(s) 1397
RsaI GTAC 5 cut(s) 191, 494, 746, 954, 1565
RsaNI GTAC 5 cut(s) 190, 493, 745, 953, 1564
RseI CAYNNNNRTG 2 cut(s) 1107, 1286
SaqAI TTAA 2 cut(s) 1020, 1583
SatI GCNGC 6 cut(s) 101, 615, 683, 906, 1395, 1398
Sau3AI GATC 3 cut(s) 108, 432, 1590
Sau96I GGNCC 4 cut(s) 139, 213, 475, 1258
ScrFI CCNGG 1 cut(s) 1241
SduI GDGCHC 1 cut(s) 820
SfaNI GCATC 3 cut(s) 747, 1127, 1495
SfcI CTRYAG 1 cut(s) 316
SfoI GGCGCC 1 cut(s) 618
SinI GGWCC 4 cut(s) 139, 213, 475, 1258
SmiMI CAYNNNNRTG 2 cut(s) 1107, 1286
Sse9I AATT 5 cut(s) 406, 823, 1197, 1310, 1580
SspDI GGCGCC 1 cut(s) 616
SspMI CTAG 3 cut(s) 155, 402, 926
StyD4I CCNGG 1 cut(s) 1239
StyI CCWWGG 1 cut(s) 748
TaaI ACNGT 4 cut(s) 331, 703, 1218, 1547
TaiI ACGT 2 cut(s) 1107, 1387
TaqI TCGA 5 cut(s) 219, 246, 279, 394, 416
TasI AATT 5 cut(s) 406, 823, 1197, 1310, 1580
TatI WGTACW 3 cut(s) 492, 952, 1563
TauI GCSGC 3 cut(s) 617, 685, 908
TfiI GAWTC 5 cut(s) 348, 413, 885, 935, 1598
Tru1I TTAA 2 cut(s) 1020, 1583
Tru9I TTAA 2 cut(s) 1020, 1583
TscAI CASTG 6 cut(s) 155, 336, 922, 1161, 1221, 1439
TseFI GTSAC 1 cut(s) 964
TseI GCWGC 3 cut(s) 100, 1394, 1397
Tsp45I GTSAC 1 cut(s) 964
TspDTI ATGAA 7 cut(s) 434, 522, 900, 927, 1097, 1248, 1561
TspGWI ACGGA 1 cut(s) 250
TspRI CASTG 6 cut(s) 155, 336, 922, 1161, 1221, 1439
VpaK11BI GGWCC 4 cut(s) 139, 213, 475, 1258
XagI CCTNNNNNAGG 1 cut(s) 302
XapI RAATTY 2 cut(s) 406, 823
XceI RCATGY 1 cut(s) 781
XmnI GAANNNNTTC 1 cut(s) 1509
XspI CTAG 3 cut(s) 155, 402, 926
Zsp2I ATGCAT 1 cut(s) 1075
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.