Rmu_sc0002198.1_g000003

Belongs to the ALG6 ALG8 glucosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002198.1
Physical Location & Seq
Forward (+)
22786 .. 27977
5192 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002198.1_g000003.1.cds

Sequence Viewer

Length: 1728 bp
atggaatcacaaagcacccagaagctgaaaaaccctccaaaaccccacaatcccatctccgagctatggtggttcttcgccgcagccacctgcgtaaagctgcttctaatcccagcctacaggagcacagacttcgaggtccatcgccattggcttgccataactcactctcttcctctctctcaatggtacttggacgagaccagcccttggactctggactaccctccattctttgcctacttcgagcgcttcctctccattttcgcaaacctcattgacccacaaatcgtccacctccagaatggcctcaactacagctcagacactgtggtttactttcaaagagtttcggtttgtgtttcggatttgtgtcttttgtatggggtttataggttgactaggaatttgaatccggtgaggcgaaaactgatctgggttttggttgtttggtctccgatgcttgtggtcgtggaccatttgcattttcagtacaatgggtttttacttggggttttgctgatttcgctttcgtatttggaggaagggagggacttgatgggtgggcttgtgtttgctgttttgttgtgttttaagcatttgtttgcggtggcggcgccggtttattttgtgtacctgttgaggcattattgctggaaaggattggtgaagggttttgggcatcttttgattttggggactctggttgtggctgtttttgccgtggcgtatggcccatttgtctatcatgggcagataaaacaagtcatccaccgcatgtttccttttggcaggggactttgtcatgcatattgggcaccaaatttttgggtgttttatatcttactggataaagttatagctttcttgcttggaagacttggatttaaaattcaggcaccagcagcttcatttactggcggactagttggtgattcgtccccttttgctgtattgcctcagattacaccggcgataacctttatcatggttctgcttgcattatctccttgtctcatcaaggcatggagagatccaagaccaatgatgattacaagatgggtagcctatgcttacacatgtggttttttgtttgggtggcacgttcatgagaaggcatcactccactttgtcatcccccttgctattgttgcagtacagaatttggatactgcgaggcattacttctttctatcaattgtgtcatgctattcactgttcccacttctatttgaatcccaggaatatccaataaaggtgctgttgttattactacactccatgctaatgtggttgggtttctctgcacaatttactaaggataaaacactggaaatggcaccatctggaaagaacaaagatagtcatttgggattaaacagatccgttacagctgcccagaaaggaggctttgatattgggtgggtggtctggagctatctggttggaccctgtgagacccgagcaaccccctctctcagcgaccatgttgtgctgtgccaccgccctcttgacccgacccacatcctcactctgggcagcctgagccttctccaccgatgtcgccgaaactctagtaggcaactctgctttcaacgaggcctggaagaaggtcgcccctcacatcaagccccccaagactcctttgaccttcatgaagccctgcccccaccccatcctcaatccccactaagctcaccgtcaactttgtgctccttaagcatctga

Protein Analysis

575

Amino Acids

65.32

Weight (kDa)

8.95

Isoelectric Point (pI)

41.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 98
AasI GACNNNNNNGTC 1 cut(s) 137
Acc36I ACCTGC 1 cut(s) 98
AccB1I GGYRCC 4 cut(s) 616, 817, 898, 1339
AccB7I CCANNNNNTGG 1 cut(s) 210
AciI CCGC 6 cut(s) 81, 608, 614, 775, 921, 1504
AclWI GGATC 2 cut(s) 1028, 1377
AcsI RAATTY 4 cut(s) 406, 823, 891, 1162
AcyI GRCGYC 1 cut(s) 617
AfaI GTAC 4 cut(s) 191, 494, 635, 1158
AfeI AGCGCT 1 cut(s) 251
AfiI CCNNNNNNNGG 3 cut(s) 66, 210, 1534
AflII CTTAAG 1 cut(s) 1717
AflIII ACRYGT 1 cut(s) 1079
AgsI TTSAA 4 cut(s) 344, 412, 1235, 1595
AhlI ACTAGT 1 cut(s) 925
AjnI CCWGG 2 cut(s) 1239, 1602
AluBI AGCT 9 cut(s) 25, 64, 100, 321, 863, 908, 1394, 1437, 1695
AluI AGCT 9 cut(s) 25, 64, 100, 321, 863, 908, 1394, 1437, 1695
Alw21I GWGCWC 2 cut(s) 128, 1715
Alw26I GTCTC 4 cut(s) 194, 459, 1019, 1451
AlwI GGATC 2 cut(s) 1028, 1377
AlwNI CAGNNNCTG 2 cut(s) 25, 329
Ama87I CYCGRG 1 cut(s) 1461
Aor51HI AGCGCT 1 cut(s) 251
AoxI GGCC 3 cut(s) 307, 733, 1600
ApeKI GCWGC 5 cut(s) 83, 100, 905, 1394, 1539
ApoI RAATTY 4 cut(s) 406, 823, 891, 1162
ArsI GACNNNNNNTTYG 2 cut(s) 391, 423
AspLEI GCGC 2 cut(s) 252, 619
AspS9I GGNCC 4 cut(s) 139, 475, 734, 1448
AsuHPI GGTGA 4 cut(s) 430, 679, 944, 1689
AvaI CYCGRG 1 cut(s) 1461
AvaII GGWCC 3 cut(s) 139, 475, 1448
BaeGI GKGCMC 1 cut(s) 820
BanI GGYRCC 4 cut(s) 616, 817, 898, 1339
BarI GAAGNNNNNNTAC 2 cut(s) 87, 119
BbsI GAAGAC 1 cut(s) 883
Bbv12I GWGCWC 2 cut(s) 128, 1715
BbvI GCAGC 5 cut(s) 87, 95, 917, 1381, 1551
BccI CCATC 6 cut(s) 62, 150, 553, 1053, 1351, 1683
BceAI ACGGC 1 cut(s) 707
BcgI CGANNNNNNTGC 2 cut(s) 115, 149
BciT130I CCWGG 2 cut(s) 1241, 1604
BciVI GTATCC 1 cut(s) 1162
BcoDI GTCTC 4 cut(s) 194, 459, 1019, 1451
BcuI ACTAGT 1 cut(s) 925
BfaI CTAG 3 cut(s) 402, 926, 1575
BfmI CTRYAG 2 cut(s) 118, 316
BfoI RGCGCY 2 cut(s) 253, 620
BfrI CTTAAG 1 cut(s) 1717
BfuAI ACCTGC 1 cut(s) 98
BfuI GTATCC 1 cut(s) 1162
BisI GCNGC 7 cut(s) 81, 84, 101, 615, 906, 1395, 1540
BlsI GCNGC 7 cut(s) 82, 85, 102, 616, 907, 1396, 1541
Bme1390I CCNGG 2 cut(s) 1241, 1604
Bme18I GGWCC 3 cut(s) 139, 475, 1448
BmeT110I CYCGRG 1 cut(s) 1461
BmgT120I GGNCC 4 cut(s) 139, 475, 734, 1448
BmiI GGNNCC 5 cut(s) 618, 819, 900, 1341, 1450
BmrFI CCNGG 2 cut(s) 1241, 1604
BmsI GCATC 3 cut(s) 450, 691, 1127
BpiI GAAGAC 1 cut(s) 883
BpmI CTGGAG 2 cut(s) 284, 1453
Bpu10I CCTNAGC 1 cut(s) 1544
BsaHI GRCGYC 1 cut(s) 617
BsaI GGTCTC 3 cut(s) 194, 459, 1451
BsaJI CCNNGG 3 cut(s) 209, 723, 1239
BsaWI WCCGGW 1 cut(s) 415
Bsc4I CCNNNNNNNGG 3 cut(s) 66, 210, 1534
Bse118I RCCGGY 2 cut(s) 619, 970
Bse1I ACTGG 3 cut(s) 852, 922, 1335
BseBI CCWGG 2 cut(s) 1241, 1604
BseDI CCNNGG 3 cut(s) 209, 723, 1239
BseGI GGATG 4 cut(s) 768, 1134, 1524, 1675
BseLI CCNNNNNNNGG 3 cut(s) 66, 210, 1534
BseMII CTCAG 4 cut(s) 336, 974, 1492, 1535
BseNI ACTGG 3 cut(s) 852, 922, 1335
BseSI GKGCMC 1 cut(s) 820
BseXI GCAGC 5 cut(s) 87, 95, 917, 1381, 1551
BseYI CCCAGC 1 cut(s) 112
BsgI GTGCAG 1 cut(s) 1290
BshFI GGCC 3 cut(s) 309, 735, 1602
BshNI GGYRCC 4 cut(s) 616, 817, 898, 1339
BsiHKAI GWGCWC 2 cut(s) 128, 1715
BsiHKCI CYCGRG 1 cut(s) 1461
BsiSI CCGG 3 cut(s) 416, 620, 971
BslFI GGGAC 4 cut(s) 566, 712, 810, 925
BslI CCNNNNNNNGG 3 cut(s) 66, 210, 1534
BsmAI GTCTC 4 cut(s) 194, 459, 1019, 1451
BsmFI GGGAC 4 cut(s) 566, 712, 810, 925
BsnI GGCC 3 cut(s) 309, 735, 1602
Bso31I GGTCTC 3 cut(s) 194, 459, 1451
BsoBI CYCGRG 1 cut(s) 1461
Bsp1286I GDGCHC 3 cut(s) 128, 820, 1715
Bsp143I GATC 3 cut(s) 432, 1033, 1382
BspACI CCGC 6 cut(s) 81, 608, 614, 775, 921, 1504
BspANI GGCC 3 cut(s) 309, 735, 1602
BspCNI CTCAG 4 cut(s) 335, 973, 1491, 1536
BspHI TCATGA 2 cut(s) 1108, 1654
BspLI GGNNCC 5 cut(s) 618, 819, 900, 1341, 1450
BspMI ACCTGC 1 cut(s) 98
BspPI GGATC 2 cut(s) 1028, 1377
BspT107I GGYRCC 4 cut(s) 616, 817, 898, 1339
BspTI CTTAAG 1 cut(s) 1717
BspTNI GGTCTC 3 cut(s) 194, 459, 1451
BsrFI RCCGGY 2 cut(s) 619, 970
BsrI ACTGG 3 cut(s) 852, 922, 1335
BssAI RCCGGY 2 cut(s) 619, 970
BssECI CCNNGG 3 cut(s) 209, 723, 1239
BssMI GATC 3 cut(s) 432, 1033, 1382
BssNI GRCGYC 1 cut(s) 617
BssT1I CCWWGG 1 cut(s) 209
Bst2UI CCWGG 2 cut(s) 1241, 1604
Bst4CI ACNGT 3 cut(s) 331, 1218, 1701
Bst6I CTCTTC 1 cut(s) 177
BstACI GRCGYC 1 cut(s) 617
BstAFI CTTAAG 1 cut(s) 1717
BstC8I GCNNGC 2 cut(s) 156, 999
BstDEI CTNAG 6 cut(s) 322, 960, 1317, 1478, 1544, 1691
BstDSI CCRYGG 1 cut(s) 723
BstF5I GGATG 4 cut(s) 768, 1134, 1524, 1675
BstH2I RGCGCY 2 cut(s) 253, 620
BstHHI GCGC 2 cut(s) 252, 619
BstKTI GATC 3 cut(s) 435, 1036, 1385
BstMAI GTCTC 4 cut(s) 194, 459, 1019, 1451
BstMBI GATC 3 cut(s) 432, 1033, 1382
BstMWI GCNNNNNNNGC 8 cut(s) 526, 614, 719, 815, 905, 1151, 1545, 1719
BstNI CCWGG 2 cut(s) 1241, 1604
BstNSI RCATGY 2 cut(s) 781, 1083
BstSCI CCNGG 2 cut(s) 1239, 1602
BstSFI CTRYAG 2 cut(s) 118, 316
BstSLI GKGCMC 1 cut(s) 820
BstV1I GCAGC 5 cut(s) 87, 95, 917, 1381, 1551
BstV2I GAAGAC 1 cut(s) 883
BstX2I RGATCY 2 cut(s) 1033, 1382
BstXI CCANNNNNNTGG 1 cut(s) 828
BstYI RGATCY 2 cut(s) 1033, 1382
BsuI GTATCC 1 cut(s) 1162
BsuRI GGCC 3 cut(s) 309, 735, 1602
BtgI CCRYGG 1 cut(s) 723
BtgZI GCGATG 1 cut(s) 128
BtsCI GGATG 4 cut(s) 768, 1134, 1524, 1675
BtsIMutI CAGTG 3 cut(s) 327, 1214, 1328
BveI ACCTGC 1 cut(s) 98
Cac8I GCNNGC 2 cut(s) 156, 999
CaiI CAGNNNCTG 2 cut(s) 25, 329
CciI TCATGA 2 cut(s) 1108, 1654
CfoI GCGC 2 cut(s) 252, 619
Cfr10I RCCGGY 2 cut(s) 619, 970
Cfr13I GGNCC 4 cut(s) 139, 475, 734, 1448
Csp6I GTAC 4 cut(s) 190, 493, 634, 1157
CviQI GTAC 4 cut(s) 190, 493, 634, 1157
DdeI CTNAG 6 cut(s) 322, 960, 1317, 1478, 1544, 1691
DinI GGCGCC 1 cut(s) 618
DpnI GATC 3 cut(s) 434, 1035, 1384
DpnII GATC 3 cut(s) 432, 1033, 1382
DraI TTTAAA 1 cut(s) 889
DrdI GACNNNNNNGTC 1 cut(s) 137
DseDI GACNNNNNNGTC 1 cut(s) 137
Eam1104I CTCTTC 1 cut(s) 177
EarI CTCTTC 1 cut(s) 177
EciI GGCGGA 1 cut(s) 936
Eco130I CCWWGG 1 cut(s) 209
Eco147I AGGCCT 1 cut(s) 1602
Eco31I GGTCTC 3 cut(s) 194, 459, 1451
Eco47I GGWCC 3 cut(s) 139, 475, 1448
Eco47III AGCGCT 1 cut(s) 251
Eco88I CYCGRG 1 cut(s) 1461
EcoRII CCWGG 2 cut(s) 1239, 1602
EcoT14I CCWWGG 1 cut(s) 209
EcoT22I ATGCAT 1 cut(s) 811
EgeI GGCGCC 1 cut(s) 618
EheI GGCGCC 1 cut(s) 618
ErhI CCWWGG 1 cut(s) 209
FaqI GGGAC 4 cut(s) 566, 712, 810, 925
Fnu4HI GCNGC 7 cut(s) 81, 84, 101, 615, 906, 1395, 1540
FokI GGATG 4 cut(s) 755, 1121, 1511, 1662
Fsp4HI GCNGC 7 cut(s) 81, 84, 101, 615, 906, 1395, 1540
FspBI CTAG 3 cut(s) 402, 926, 1575
GlaI GCGC 2 cut(s) 251, 618
GluI GCNGC 7 cut(s) 81, 84, 101, 615, 906, 1395, 1540
GsaI CCCAGC 1 cut(s) 116
GsuI CTGGAG 2 cut(s) 284, 1453
HaeII RGCGCY 2 cut(s) 253, 620
HaeIII GGCC 3 cut(s) 309, 735, 1602
HapII CCGG 3 cut(s) 416, 620, 971
HhaI GCGC 2 cut(s) 252, 619
Hin1I GRCGYC 1 cut(s) 617
Hin6I GCGC 2 cut(s) 250, 617
HinP1I GCGC 2 cut(s) 250, 617
HincII GTYRAC 2 cut(s) 399, 1704
HindII GTYRAC 2 cut(s) 399, 1704
HinfI GANTC 7 cut(s) 5, 214, 412, 700, 935, 1235, 1640
HpaII CCGG 3 cut(s) 416, 620, 971
HphI GGTGA 4 cut(s) 430, 679, 944, 1689
Hpy166II GTNNAC 6 cut(s) 295, 337, 399, 475, 634, 1704
Hpy188I TCNGA 6 cut(s) 61, 325, 367, 459, 963, 1727
Hpy188III TCNNGA 7 cut(s) 218, 301, 1109, 1347, 1432, 1511, 1655
Hpy8I GTNNAC 6 cut(s) 295, 337, 399, 475, 634, 1704
HpyAV CCTTC 6 cut(s) 539, 664, 1108, 1559, 1604, 1661
HpyCH4III ACNGT 3 cut(s) 331, 1218, 1701
HpyCH4IV ACGT 1 cut(s) 1104
HpyCH4V TGCA 5 cut(s) 484, 809, 1001, 1154, 1307
HpyF10VI GCNNNNNNNGC 8 cut(s) 526, 614, 719, 815, 905, 1151, 1545, 1719
HpyF3I CTNAG 6 cut(s) 322, 960, 1317, 1478, 1544, 1691
HpySE526I ACGT 1 cut(s) 1104
Hsp92I GRCGYC 1 cut(s) 617
HspAI GCGC 2 cut(s) 250, 617
KasI GGCGCC 1 cut(s) 616
Kzo9I GATC 3 cut(s) 432, 1033, 1382
LmnI GCTCC 3 cut(s) 123, 1434, 1718
Lsp1109I GCAGC 5 cut(s) 87, 95, 917, 1381, 1551
LweI GCATC 3 cut(s) 450, 691, 1127
MaeI CTAG 3 cut(s) 402, 926, 1575
MaeII ACGT 1 cut(s) 1104
MaeIII GTNAC 1 cut(s) 1387
MalI GATC 3 cut(s) 434, 1035, 1384
MboI GATC 3 cut(s) 432, 1033, 1382
MboII GAAGA 4 cut(s) 67, 164, 888, 1619
MfeI CAATTG 1 cut(s) 1197
MflI RGATCY 2 cut(s) 1033, 1382
MhlI GDGCHC 3 cut(s) 128, 820, 1715
MluCI AATT 6 cut(s) 406, 823, 891, 1162, 1197, 1310
Mly113I GGCGCC 1 cut(s) 617
MlyI GAGTC 3 cut(s) 208, 694, 1634
MmeI TCCRAC 1 cut(s) 1426
Mph1103I ATGCAT 1 cut(s) 811
MseI TTAA 4 cut(s) 594, 888, 1376, 1718
MslI CAYNNNNRTG 2 cut(s) 1107, 1286
MspA1I CMGCKG 1 cut(s) 1394
MspCI CTTAAG 1 cut(s) 1717
MspI CCGG 3 cut(s) 416, 620, 971
MspR9I CCNGG 2 cut(s) 1241, 1604
MunI CAATTG 1 cut(s) 1197
MvaI CCWGG 2 cut(s) 1241, 1604
MwoI GCNNNNNNNGC 8 cut(s) 526, 614, 719, 815, 905, 1151, 1545, 1719
NarI GGCGCC 1 cut(s) 617
NdeII GATC 3 cut(s) 432, 1033, 1382
NlaIV GGNNCC 5 cut(s) 618, 819, 900, 1341, 1450
NsiI ATGCAT 1 cut(s) 811
NspI RCATGY 2 cut(s) 781, 1083
PagI TCATGA 2 cut(s) 1108, 1654
PaqCI CACCTGC 1 cut(s) 98
PceI AGGCCT 1 cut(s) 1602
PciI ACATGT 1 cut(s) 1079
PfeI GAWTC 4 cut(s) 5, 412, 935, 1235
PflFI GACNNNGTC 1 cut(s) 801
PflMI CCANNNNNTGG 1 cut(s) 210
PkrI GCNGC 7 cut(s) 82, 85, 102, 616, 907, 1396, 1541
PleI GAGTC 3 cut(s) 208, 694, 1634
PluTI GGCGCC 1 cut(s) 620
PpsI GAGTC 3 cut(s) 208, 694, 1634
PscI ACATGT 1 cut(s) 1079
Psp6I CCWGG 2 cut(s) 1239, 1602
PspFI CCCAGC 1 cut(s) 112
PspGI CCWGG 2 cut(s) 1239, 1602
PspN4I GGNNCC 5 cut(s) 618, 819, 900, 1341, 1450
PspPI GGNCC 4 cut(s) 139, 475, 734, 1448
PstNI CAGNNNCTG 2 cut(s) 25, 329
PsuI RGATCY 2 cut(s) 1033, 1382
PsyI GACNNNGTC 1 cut(s) 801
PvuII CAGCTG 1 cut(s) 1394
RsaI GTAC 4 cut(s) 191, 494, 635, 1158
RsaNI GTAC 4 cut(s) 190, 493, 634, 1157
RseI CAYNNNNRTG 2 cut(s) 1107, 1286
SaqAI TTAA 4 cut(s) 594, 888, 1376, 1718
SatI GCNGC 7 cut(s) 81, 84, 101, 615, 906, 1395, 1540
Sau3AI GATC 3 cut(s) 432, 1033, 1382
Sau96I GGNCC 4 cut(s) 139, 475, 734, 1448
SchI GAGTC 3 cut(s) 208, 694, 1634
ScrFI CCNGG 2 cut(s) 1241, 1604
SduI GDGCHC 3 cut(s) 128, 820, 1715
SfaNI GCATC 3 cut(s) 450, 691, 1127
SfcI CTRYAG 2 cut(s) 118, 316
SfoI GGCGCC 1 cut(s) 618
SgrAI CRCCGGYG 1 cut(s) 970
SinI GGWCC 3 cut(s) 139, 475, 1448
SmiMI CAYNNNNRTG 2 cut(s) 1107, 1286
SmlI CTYRAG 1 cut(s) 1717
SmoI CTYRAG 1 cut(s) 1717
SpeI ACTAGT 1 cut(s) 925
Sse9I AATT 6 cut(s) 406, 823, 891, 1162, 1197, 1310
SseBI AGGCCT 1 cut(s) 1602
SsiI CCGC 6 cut(s) 81, 608, 614, 775, 921, 1504
SspDI GGCGCC 1 cut(s) 616
SspMI CTAG 3 cut(s) 402, 926, 1575
StuI AGGCCT 1 cut(s) 1602
StyD4I CCNGG 2 cut(s) 1239, 1602
StyI CCWWGG 1 cut(s) 209
TaaI ACNGT 3 cut(s) 331, 1218, 1701
TaiI ACGT 1 cut(s) 1107
TaqI TCGA 2 cut(s) 135, 246
TasI AATT 6 cut(s) 406, 823, 891, 1162, 1197, 1310
TatI WGTACW 2 cut(s) 492, 1156
TauI GCSGC 2 cut(s) 83, 617
TfiI GAWTC 4 cut(s) 5, 412, 935, 1235
Tru1I TTAA 4 cut(s) 594, 888, 1376, 1718
Tru9I TTAA 4 cut(s) 594, 888, 1376, 1718
TscAI CASTG 3 cut(s) 334, 1221, 1335
TseI GCWGC 5 cut(s) 83, 100, 905, 1394, 1539
TspDTI ATGAA 4 cut(s) 900, 1097, 1643, 1671
TspGWI ACGGA 1 cut(s) 1375
TspRI CASTG 3 cut(s) 334, 1221, 1335
Tth111I GACNNNGTC 1 cut(s) 801
Van91I CCANNNNNTGG 1 cut(s) 210
Vha464I CTTAAG 1 cut(s) 1717
VpaK11BI GGWCC 3 cut(s) 139, 475, 1448
XapI RAATTY 4 cut(s) 406, 823, 891, 1162
XceI RCATGY 2 cut(s) 781, 1083
XcmI CCANNNNNNNNNTGG 1 cut(s) 302
XspI CTAG 3 cut(s) 402, 926, 1575
Zsp2I ATGCAT 1 cut(s) 811
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.