RLG00000028908

Belongs to the ALG6 ALG8 glucosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
30130067 .. 30134366
4300 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028908

Sequence Viewer

Length: 1473 bp
ATGGAATCACAAAGCACCCAGAAGCTGAAAAACCCTCCAAAACCCCACAATCCCATCTCCGAGCTATGGTGGTTCTTCGCCGCAGCCACCTGCGTAAAGCTGCTTCTGATCCCAGCCTACAGGAGCACAGACTTCGAGGTCCATCGCCATTGGCTTGCCATAACTCACTCTCTTCCTCTCTCTCAATGGTACTTAGACGAGACCAGCCCTTGGACTCTAGACTACCCTCCATTCTTTGCCTACTTCGAGCGCTTCCTGTCCATTTTCGCAAACCTCATTGACCCACAAATGGTCCACCTCCAGAATGGCCTCAACTACAGCTCAGACACAGTGGTTTACTTTCAAAGAGTTTCGGTTTGTGTTTCGGATTTGTGTCTTTTGTATGGGGTTTATAGGTTGACCAGGAATTTGGATCCGGTGAGGCGAAAACTGATCTGGGTTTTGGTTGTTTGGTCTCCAATGCTTGTGGTCGTGGACCATTTGCATTTTCAGTACAATGGGTTTTTGCTTGGGGTTTTGCTGATTTCGCTTTCGTATTTGGAGGAAGGGAAGGACTTGATGGGTGGGCTTGTGTTTGCTGTTTTGTTGTGTTTTAAGCATTTGTTTGCGGTGGCGGCGCCGGTTTATTTTGTGTACCTGTTGAGGCATTATTGCTGGAAAGGATTGGTGAAGGGTTTTGGGCGTCTTTTGATTTTGGGGACTCTGGTTGTGGCTGTTTTTGCAGTGGCGTATGGCCCATTTGTCTATCATGGGCAGATAAAACAAGTCATCCACCGCATGTTTCCTTTTGGCAGGGGACTTTGTCATGCATATTGGGCACCAAATTTTTGGGTGTTTTATATCTTACTGGATAAAGTTATAGCTTTCTTGCTTGGAAGACTTGGATTTAAAATTCAGGCACCAGCAGCTTCATTCACCGGCGGACTAGTTGGTGATTCATCCCCTTTTGCTGTATTGCCTCAGATTACACCGGCGATAACCTTTATCATGGTTCTGCTTGCATTATCTCCTTGTCTCATCAAGGCATGGAGAGATCCAAGACCAATGATGATTACAAGATGGGTAGCCTATGCTTACACATGTGGTTTTTTGTTTGGGTGGCATGTTCATGAGAAGGCATCACTCCACTTTGTCATCCCCCTTGCTATTGTTGCAGTACAGAATTTGGATACTGCGAGGCATTACTTCTTTCTATCAATTGTGTCATGCTATTCACTGTTCCCGCTTCTATTTGAATCCCAGGAATATCCAATAAAGGTGCTGTTGTTATTACTACACTCCATGCTAATGTGTTTGGGTTTCTCTGCACAATTTACTAAGGATAAAACACTGGAAATGGCACCATCTGGAAAGAACAAAGATAGTCATTTGGGATTAAACAGATCCGTTATAGCTGCCCAGAAAGGGGGCTTTGATATTGGGTGGGTGGTCTGGACCTATCTGGGGTCATGTACTCTTTCCTTTGGCAGTTAA

Protein Analysis

491

Amino Acids

55.81

Weight (kDa)

9.04

Isoelectric Point (pI)

35.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Alg6_Alg8 PF03155 29 - 442 7e-152 ALG6, ALG8 glycosyltransferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 98
AasI GACNNNNNNGTC 1 cut(s) 137
Acc36I ACCTGC 1 cut(s) 98
AccB1I GGYRCC 4 cut(s) 616, 817, 898, 1339
AccB7I CCANNNNNTGG 1 cut(s) 210
AciI CCGC 6 cut(s) 81, 608, 614, 775, 921, 1223
AclWI GGATC 5 cut(s) 103, 407, 420, 1028, 1377
AcsI RAATTY 4 cut(s) 406, 823, 891, 1162
AcyI GRCGYC 2 cut(s) 617, 682
AfaI GTAC 5 cut(s) 191, 494, 635, 1158, 1453
AfeI AGCGCT 1 cut(s) 251
AfiI CCNNNNNNNGG 6 cut(s) 66, 210, 289, 1404, 1405, 1443
AflIII ACRYGT 1 cut(s) 1079
AgsI TTSAA 2 cut(s) 344, 1235
AhlI ACTAGT 1 cut(s) 925
AjnI CCWGG 2 cut(s) 401, 1239
AluBI AGCT 7 cut(s) 25, 64, 100, 321, 863, 908, 1394
AluI AGCT 7 cut(s) 25, 64, 100, 321, 863, 908, 1394
Alw21I GWGCWC 1 cut(s) 128
Alw26I GTCTC 3 cut(s) 194, 459, 1019
AlwI GGATC 5 cut(s) 103, 407, 420, 1028, 1377
AlwNI CAGNNNCTG 1 cut(s) 25
Aor51HI AGCGCT 1 cut(s) 251
AoxI GGCC 2 cut(s) 307, 733
ApeKI GCWGC 4 cut(s) 83, 100, 905, 1394
ApoI RAATTY 4 cut(s) 406, 823, 891, 1162
ArsI GACNNNNNNTTYG 2 cut(s) 391, 423
AspLEI GCGC 2 cut(s) 252, 619
AspS9I GGNCC 5 cut(s) 139, 292, 475, 734, 1434
AsuHPI GGTGA 4 cut(s) 430, 679, 907, 944
AvaII GGWCC 4 cut(s) 139, 292, 475, 1434
BaeGI GKGCMC 1 cut(s) 820
BamHI GGATCC 1 cut(s) 412
BanI GGYRCC 4 cut(s) 616, 817, 898, 1339
BarI GAAGNNNNNNTAC 2 cut(s) 87, 119
BbsI GAAGAC 1 cut(s) 883
Bbv12I GWGCWC 1 cut(s) 128
BbvI GCAGC 4 cut(s) 87, 95, 917, 1381
BccI CCATC 5 cut(s) 62, 150, 553, 1053, 1351
BcgI CGANNNNNNTGC 2 cut(s) 115, 149
BciT130I CCWGG 2 cut(s) 403, 1241
BciVI GTATCC 1 cut(s) 1162
BcoDI GTCTC 3 cut(s) 194, 459, 1019
BcuI ACTAGT 1 cut(s) 925
BfaI CTAG 2 cut(s) 218, 926
BfmI CTRYAG 2 cut(s) 118, 316
BfoI RGCGCY 2 cut(s) 253, 620
BfuAI ACCTGC 1 cut(s) 98
BfuI GTATCC 1 cut(s) 1162
BisI GCNGC 6 cut(s) 81, 84, 101, 615, 906, 1395
BlsI GCNGC 6 cut(s) 82, 85, 102, 616, 907, 1396
Bme1390I CCNGG 2 cut(s) 403, 1241
Bme18I GGWCC 4 cut(s) 139, 292, 475, 1434
BmgT120I GGNCC 5 cut(s) 139, 292, 475, 734, 1434
BmiI GGNNCC 5 cut(s) 414, 618, 819, 900, 1341
BmrFI CCNGG 2 cut(s) 403, 1241
BmsI GCATC 1 cut(s) 1127
BpiI GAAGAC 1 cut(s) 883
BpmI CTGGAG 1 cut(s) 284
BsaHI GRCGYC 2 cut(s) 617, 682
BsaI GGTCTC 2 cut(s) 194, 459
BsaJI CCNNGG 2 cut(s) 209, 1239
BsaWI WCCGGW 1 cut(s) 415
Bsc4I CCNNNNNNNGG 6 cut(s) 66, 210, 289, 1404, 1405, 1443
Bse118I RCCGGY 3 cut(s) 619, 917, 970
Bse1I ACTGG 2 cut(s) 852, 1335
BseBI CCWGG 2 cut(s) 403, 1241
BseDI CCNNGG 2 cut(s) 209, 1239
BseGI GGATG 3 cut(s) 768, 938, 1134
BseLI CCNNNNNNNGG 6 cut(s) 66, 210, 289, 1404, 1405, 1443
BseMII CTCAG 2 cut(s) 336, 974
BseNI ACTGG 2 cut(s) 852, 1335
BseSI GKGCMC 1 cut(s) 820
BseXI GCAGC 4 cut(s) 87, 95, 917, 1381
BseYI CCCAGC 1 cut(s) 112
BsgI GTGCAG 1 cut(s) 1290
BshFI GGCC 2 cut(s) 309, 735
BshNI GGYRCC 4 cut(s) 616, 817, 898, 1339
BsiHKAI GWGCWC 1 cut(s) 128
BsiSI CCGG 4 cut(s) 416, 620, 918, 971
BslFI GGGAC 2 cut(s) 712, 810
BslI CCNNNNNNNGG 6 cut(s) 66, 210, 289, 1404, 1405, 1443
BsmAI GTCTC 3 cut(s) 194, 459, 1019
BsmFI GGGAC 2 cut(s) 712, 810
BsnI GGCC 2 cut(s) 309, 735
Bso31I GGTCTC 2 cut(s) 194, 459
Bsp1286I GDGCHC 2 cut(s) 128, 820
Bsp143I GATC 5 cut(s) 108, 412, 432, 1033, 1382
BspACI CCGC 6 cut(s) 81, 608, 614, 775, 921, 1223
BspANI GGCC 2 cut(s) 309, 735
BspCNI CTCAG 2 cut(s) 335, 973
BspHI TCATGA 1 cut(s) 1108
BspLI GGNNCC 5 cut(s) 414, 618, 819, 900, 1341
BspMI ACCTGC 1 cut(s) 98
BspPI GGATC 5 cut(s) 103, 407, 420, 1028, 1377
BspT107I GGYRCC 4 cut(s) 616, 817, 898, 1339
BspTNI GGTCTC 2 cut(s) 194, 459
BsrFI RCCGGY 3 cut(s) 619, 917, 970
BsrI ACTGG 2 cut(s) 852, 1335
BssAI RCCGGY 3 cut(s) 619, 917, 970
BssECI CCNNGG 2 cut(s) 209, 1239
BssMI GATC 5 cut(s) 108, 412, 432, 1033, 1382
BssNI GRCGYC 2 cut(s) 617, 682
BssT1I CCWWGG 1 cut(s) 209
Bst2UI CCWGG 2 cut(s) 403, 1241
Bst4CI ACNGT 2 cut(s) 331, 1218
Bst6I CTCTTC 1 cut(s) 177
BstACI GRCGYC 2 cut(s) 617, 682
BstC8I GCNNGC 2 cut(s) 156, 999
BstDEI CTNAG 4 cut(s) 193, 322, 960, 1317
BstF5I GGATG 3 cut(s) 768, 938, 1134
BstH2I RGCGCY 2 cut(s) 253, 620
BstHHI GCGC 2 cut(s) 252, 619
BstKTI GATC 5 cut(s) 111, 415, 435, 1036, 1385
BstMAI GTCTC 3 cut(s) 194, 459, 1019
BstMBI GATC 5 cut(s) 108, 412, 432, 1033, 1382
BstMWI GCNNNNNNNGC 6 cut(s) 526, 614, 719, 815, 905, 1151
BstNI CCWGG 2 cut(s) 403, 1241
BstNSI RCATGY 3 cut(s) 781, 1083, 1106
BstSCI CCNGG 2 cut(s) 401, 1239
BstSFI CTRYAG 2 cut(s) 118, 316
BstSLI GKGCMC 1 cut(s) 820
BstV1I GCAGC 4 cut(s) 87, 95, 917, 1381
BstV2I GAAGAC 1 cut(s) 883
BstX2I RGATCY 3 cut(s) 412, 1033, 1382
BstXI CCANNNNNNTGG 2 cut(s) 409, 828
BstYI RGATCY 3 cut(s) 412, 1033, 1382
BsuI GTATCC 1 cut(s) 1162
BsuRI GGCC 2 cut(s) 309, 735
BtgZI GCGATG 1 cut(s) 128
BtsCI GGATG 3 cut(s) 768, 938, 1134
BtsI GCAGTG 1 cut(s) 729
BtsIMutI CAGTG 4 cut(s) 336, 729, 1214, 1328
BveI ACCTGC 1 cut(s) 98
Cac8I GCNNGC 2 cut(s) 156, 999
CaiI CAGNNNCTG 1 cut(s) 25
CciI TCATGA 1 cut(s) 1108
CfoI GCGC 2 cut(s) 252, 619
Cfr10I RCCGGY 3 cut(s) 619, 917, 970
Cfr13I GGNCC 5 cut(s) 139, 292, 475, 734, 1434
CseI GACGC 1 cut(s) 671
Csp6I GTAC 5 cut(s) 190, 493, 634, 1157, 1452
CspCI CAANNNNNGTGG 2 cut(s) 447, 482
CviQI GTAC 5 cut(s) 190, 493, 634, 1157, 1452
DdeI CTNAG 4 cut(s) 193, 322, 960, 1317
DinI GGCGCC 1 cut(s) 618
DpnI GATC 5 cut(s) 110, 414, 434, 1035, 1384
DpnII GATC 5 cut(s) 108, 412, 432, 1033, 1382
DraI TTTAAA 1 cut(s) 889
DrdI GACNNNNNNGTC 1 cut(s) 137
DseDI GACNNNNNNGTC 1 cut(s) 137
Eam1104I CTCTTC 1 cut(s) 177
EarI CTCTTC 1 cut(s) 177
EciI GGCGGA 1 cut(s) 936
Eco130I CCWWGG 1 cut(s) 209
Eco31I GGTCTC 2 cut(s) 194, 459
Eco47I GGWCC 4 cut(s) 139, 292, 475, 1434
Eco47III AGCGCT 1 cut(s) 251
EcoRII CCWGG 2 cut(s) 401, 1239
EcoT14I CCWWGG 1 cut(s) 209
EcoT22I ATGCAT 1 cut(s) 811
EgeI GGCGCC 1 cut(s) 618
EheI GGCGCC 1 cut(s) 618
ErhI CCWWGG 1 cut(s) 209
FaqI GGGAC 2 cut(s) 712, 810
FauI CCCGC 1 cut(s) 1230
Fnu4HI GCNGC 6 cut(s) 81, 84, 101, 615, 906, 1395
FokI GGATG 3 cut(s) 755, 925, 1121
Fsp4HI GCNGC 6 cut(s) 81, 84, 101, 615, 906, 1395
FspBI CTAG 2 cut(s) 218, 926
GlaI GCGC 2 cut(s) 251, 618
GluI GCNGC 6 cut(s) 81, 84, 101, 615, 906, 1395
GsaI CCCAGC 1 cut(s) 116
GsuI CTGGAG 1 cut(s) 284
HaeII RGCGCY 2 cut(s) 253, 620
HaeIII GGCC 2 cut(s) 309, 735
HapII CCGG 4 cut(s) 416, 620, 918, 971
HgaI GACGC 1 cut(s) 671
HhaI GCGC 2 cut(s) 252, 619
Hin1I GRCGYC 2 cut(s) 617, 682
Hin6I GCGC 2 cut(s) 250, 617
HinP1I GCGC 2 cut(s) 250, 617
HincII GTYRAC 1 cut(s) 399
HindII GTYRAC 1 cut(s) 399
HinfI GANTC 5 cut(s) 5, 214, 700, 935, 1235
HpaII CCGG 4 cut(s) 416, 620, 918, 971
HphI GGTGA 4 cut(s) 430, 679, 907, 944
Hpy166II GTNNAC 5 cut(s) 295, 337, 399, 475, 634
Hpy188I TCNGA 5 cut(s) 61, 108, 325, 367, 963
Hpy188III TCNNGA 5 cut(s) 218, 301, 1109, 1347, 1432
Hpy8I GTNNAC 5 cut(s) 295, 337, 399, 475, 634
HpyAV CCTTC 4 cut(s) 539, 544, 664, 1108
HpyCH4III ACNGT 2 cut(s) 331, 1218
HpyCH4V TGCA 6 cut(s) 484, 722, 809, 1001, 1154, 1307
HpyF10VI GCNNNNNNNGC 6 cut(s) 526, 614, 719, 815, 905, 1151
HpyF3I CTNAG 4 cut(s) 193, 322, 960, 1317
Hsp92I GRCGYC 2 cut(s) 617, 682
HspAI GCGC 2 cut(s) 250, 617
KasI GGCGCC 1 cut(s) 616
Kzo9I GATC 5 cut(s) 108, 412, 432, 1033, 1382
LmnI GCTCC 1 cut(s) 123
Lsp1109I GCAGC 4 cut(s) 87, 95, 917, 1381
LweI GCATC 1 cut(s) 1127
MaeI CTAG 2 cut(s) 218, 926
MalI GATC 5 cut(s) 110, 414, 434, 1035, 1384
MboI GATC 5 cut(s) 108, 412, 432, 1033, 1382
MboII GAAGA 3 cut(s) 67, 164, 888
MfeI CAATTG 1 cut(s) 1197
MflI RGATCY 3 cut(s) 412, 1033, 1382
MhlI GDGCHC 2 cut(s) 128, 820
MluCI AATT 6 cut(s) 406, 823, 891, 1162, 1197, 1310
Mly113I GGCGCC 1 cut(s) 617
MlyI GAGTC 2 cut(s) 208, 694
Mph1103I ATGCAT 1 cut(s) 811
MseI TTAA 4 cut(s) 594, 888, 1376, 1471
MslI CAYNNNNRTG 2 cut(s) 1107, 1286
MspI CCGG 4 cut(s) 416, 620, 918, 971
MspR9I CCNGG 2 cut(s) 403, 1241
MunI CAATTG 1 cut(s) 1197
MvaI CCWGG 2 cut(s) 403, 1241
MwoI GCNNNNNNNGC 6 cut(s) 526, 614, 719, 815, 905, 1151
NarI GGCGCC 1 cut(s) 617
NdeII GATC 5 cut(s) 108, 412, 432, 1033, 1382
NlaIV GGNNCC 5 cut(s) 414, 618, 819, 900, 1341
NsiI ATGCAT 1 cut(s) 811
NspI RCATGY 3 cut(s) 781, 1083, 1106
PagI TCATGA 1 cut(s) 1108
PaqCI CACCTGC 1 cut(s) 98
PciI ACATGT 1 cut(s) 1079
PfeI GAWTC 3 cut(s) 5, 935, 1235
PflFI GACNNNGTC 1 cut(s) 801
PflMI CCANNNNNTGG 1 cut(s) 210
PkrI GCNGC 6 cut(s) 82, 85, 102, 616, 907, 1396
PleI GAGTC 2 cut(s) 208, 694
PluTI GGCGCC 1 cut(s) 620
PpsI GAGTC 2 cut(s) 208, 694
PscI ACATGT 1 cut(s) 1079
Psp6I CCWGG 2 cut(s) 401, 1239
PspFI CCCAGC 1 cut(s) 112
PspGI CCWGG 2 cut(s) 401, 1239
PspN4I GGNNCC 5 cut(s) 414, 618, 819, 900, 1341
PspPI GGNCC 5 cut(s) 139, 292, 475, 734, 1434
PstNI CAGNNNCTG 1 cut(s) 25
PsuI RGATCY 3 cut(s) 412, 1033, 1382
PsyI GACNNNGTC 1 cut(s) 801
RsaI GTAC 5 cut(s) 191, 494, 635, 1158, 1453
RsaNI GTAC 5 cut(s) 190, 493, 634, 1157, 1452
RseI CAYNNNNRTG 2 cut(s) 1107, 1286
SaqAI TTAA 4 cut(s) 594, 888, 1376, 1471
SatI GCNGC 6 cut(s) 81, 84, 101, 615, 906, 1395
Sau3AI GATC 5 cut(s) 108, 412, 432, 1033, 1382
Sau96I GGNCC 5 cut(s) 139, 292, 475, 734, 1434
SchI GAGTC 2 cut(s) 208, 694
ScrFI CCNGG 2 cut(s) 403, 1241
SduI GDGCHC 2 cut(s) 128, 820
SfaNI GCATC 1 cut(s) 1127
SfcI CTRYAG 2 cut(s) 118, 316
SfoI GGCGCC 1 cut(s) 618
SgrAI CRCCGGYG 2 cut(s) 917, 970
SinI GGWCC 4 cut(s) 139, 292, 475, 1434
SmiMI CAYNNNNRTG 2 cut(s) 1107, 1286
SpeI ACTAGT 1 cut(s) 925
Sse9I AATT 6 cut(s) 406, 823, 891, 1162, 1197, 1310
SsiI CCGC 6 cut(s) 81, 608, 614, 775, 921, 1223
SspDI GGCGCC 1 cut(s) 616
SspMI CTAG 2 cut(s) 218, 926
StyD4I CCNGG 2 cut(s) 401, 1239
StyI CCWWGG 1 cut(s) 209
TaaI ACNGT 2 cut(s) 331, 1218
TaqI TCGA 2 cut(s) 135, 246
TasI AATT 6 cut(s) 406, 823, 891, 1162, 1197, 1310
TatI WGTACW 3 cut(s) 492, 1156, 1451
TauI GCSGC 2 cut(s) 83, 617
TfiI GAWTC 3 cut(s) 5, 935, 1235
Tru1I TTAA 4 cut(s) 594, 888, 1376, 1471
Tru9I TTAA 4 cut(s) 594, 888, 1376, 1471
TscAI CASTG 4 cut(s) 336, 729, 1221, 1335
TseI GCWGC 4 cut(s) 83, 100, 905, 1394
TspDTI ATGAA 3 cut(s) 900, 927, 1097
TspGWI ACGGA 1 cut(s) 1375
TspRI CASTG 4 cut(s) 336, 729, 1221, 1335
Tth111I GACNNNGTC 1 cut(s) 801
Van91I CCANNNNNTGG 1 cut(s) 210
VpaK11BI GGWCC 4 cut(s) 139, 292, 475, 1434
XapI RAATTY 4 cut(s) 406, 823, 891, 1162
XbaI TCTAGA 1 cut(s) 217
XceI RCATGY 3 cut(s) 781, 1083, 1106
XcmI CCANNNNNNNNNTGG 1 cut(s) 302
XspI CTAG 2 cut(s) 218, 926
Zsp2I ATGCAT 1 cut(s) 811
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.