RchiOBHm_Chr1g0344321

Belongs to the ALG6 ALG8 glucosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
36642042 .. 36646816
4775 bp
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UTR
Exon/CDS
Intron
PRQ57078

Sequence Viewer

Length: 1602 bp
ATGGAATCACAAAGCACCCAGAAGCTGAAAAACCCTCCAAAACCCCACAATCCCATCTCCGAGCTATGGTGGTTCTTCGCCGCAGCCACCTGCGTAAAGCTGCTTCTGATACCAGCCTACAGGAGCACAGACTTCGAGGTCCATCGCCATTGGCTTGCCATAACTCACTCTCTTCCTCTCTCTCAATGGTACTTGGACGAGACCAGCCCTTGGACTTTGGACTACCCTCCATTCTTTGCCTACTTCGAGCGCTTCCTCTCCATTTTCGCAAACCTCATTGACCCACAAATGGTCCACCTCCAGAATGGCCTCAACTACAGCTCAGACACTGTGGTTTACTTTCAAAGAGTTTCGGTTTGTGTTTCGGATTTGTGTCTTTTGTATGGGGTTTATAGGTTGACTAGGAATTTGGATCCGGTGAGGCGAAAATTGATCTGGGTTTTGGTTGTTTGGTCTCCGATGCTTGTGGTCGTGGACCATTTGCATTTTCAGTACAATGGGTTTTTGCTTGGGGTTTTGCTGATTTCGCTTTCGTATTTGGAGGAAGGGAGGGACTTGATGGGTGGGCTTGTCTTTGCTGTTTTGTTGTGTTTCAAGCATTTGTTCGCGGTGGCGGCGCCGGTTTATTTTGTGTACCTGTTGAGGCATTATTGCTGGAAAGGATTGGTGAGGGGTTTTGGGCGTCTTTTGATTTTGGGGACTCTGGTTGTGGCTGTTTTTGCAGTGGCGTATGGCCCATTTGTCTATCATGGGCAGATAAAACAAGTCATCCACCGCATGTTTCCTTTTGGTAGGGGACTTTGTCATGCATATTGGGCACCAAATTTTTGGGTGTTTTATATCTTACTGGATAAAGTTATAGCTTTCTTGCTTGGAAGACTTGGATTTAAAATTCAGGCACCAGCAGCTTCATTTACTGGCGGACTAGTTGGTGATTCGTCCCCTTTTGCTGTATTGCCTCAGATTACACCGGCGATAACCTTTATCATGGTTCTGCTTGCATTATCTCCTTGTCTCATCAAGGCATGGAGAGATCCAAGACCAATGATGATTACAAGATGGGTAGCCTATGCTTACACATGTGGTTTTTTGTTTGGGTGGCACGTTCATGAGAAGGCATCACTCCACTTTGTCATCCCCCTTGCTATTGTTGCAGTACAGAATTTGGATACTGCGAGGCATTACTTCTTTCTATCAATTGTGTCATGCTATTCACTGTTCCCGCTTCTATTTGAATCCCAGGAATATCCAATAAAGGTGCTGTTGTTATTACTACACTCCATGCTAATGTGGTTGGGTTTCTCTGCACAATTTACTAAGGATAAAACACTGGAAATGGCACCATCTGGAAAGAACAAAGATAGTCATTTGGGATTAAACAGATCCGTTACAGCTGCCCAGAAAGGAGGCTTTGATATTGGGTGGGTGGTCTGGAGCTATCTGGTTGGTCTGTTGCTTGTTGAGATTTGGGGCCAGTTTCTGCATCCTATTTTTCTTGGTGCTGAGCTTCCTTTTTTACCCCTTATGCTGATCTCTGTATACTGTTCAGTAGGGGTCATGTACTCTTTCCTTTGGCAGTTAAAACATATCCTTGTTTCATAA

Protein Analysis

533

Amino Acids

61.0

Weight (kDa)

9.0

Isoelectric Point (pI)

34.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Alg6_Alg8 PF03155 29 - 525 6.5e-161 ALG6, ALG8 glycosyltransferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 98
AasI GACNNNNNNGTC 1 cut(s) 137
Acc36I ACCTGC 1 cut(s) 98
AccB1I GGYRCC 4 cut(s) 616, 817, 898, 1339
AccB7I CCANNNNNTGG 1 cut(s) 210
AccI GTMKAC 1 cut(s) 1539
AccII CGCG 1 cut(s) 608
AciI CCGC 6 cut(s) 81, 608, 614, 775, 921, 1223
AclWI GGATC 4 cut(s) 407, 420, 1028, 1377
AcsI RAATTY 4 cut(s) 406, 823, 891, 1162
AcyI GRCGYC 2 cut(s) 617, 682
AfaI GTAC 5 cut(s) 191, 494, 635, 1158, 1562
AfeI AGCGCT 1 cut(s) 251
AfiI CCNNNNNNNGG 3 cut(s) 66, 210, 289
AflIII ACRYGT 1 cut(s) 1079
AgsI TTSAA 3 cut(s) 344, 595, 1235
AhlI ACTAGT 1 cut(s) 925
AjnI CCWGG 1 cut(s) 1239
AluBI AGCT 9 cut(s) 25, 64, 100, 321, 863, 908, 1394, 1437, 1507
AluI AGCT 9 cut(s) 25, 64, 100, 321, 863, 908, 1394, 1437, 1507
Alw21I GWGCWC 1 cut(s) 128
Alw26I GTCTC 3 cut(s) 194, 459, 1019
AlwI GGATC 4 cut(s) 407, 420, 1028, 1377
AlwNI CAGNNNCTG 3 cut(s) 25, 329, 1480
Aor51HI AGCGCT 1 cut(s) 251
AoxI GGCC 3 cut(s) 307, 733, 1471
ApeKI GCWGC 4 cut(s) 83, 100, 905, 1394
ApoI RAATTY 4 cut(s) 406, 823, 891, 1162
ArsI GACNNNNNNTTYG 2 cut(s) 391, 423
AspLEI GCGC 2 cut(s) 252, 619
AspS9I GGNCC 5 cut(s) 139, 292, 475, 734, 1471
AsuHPI GGTGA 3 cut(s) 430, 679, 944
AvaII GGWCC 3 cut(s) 139, 292, 475
BaeGI GKGCMC 1 cut(s) 820
BamHI GGATCC 1 cut(s) 412
BanI GGYRCC 4 cut(s) 616, 817, 898, 1339
BarI GAAGNNNNNNTAC 2 cut(s) 87, 119
BbsI GAAGAC 1 cut(s) 883
Bbv12I GWGCWC 1 cut(s) 128
BbvI GCAGC 4 cut(s) 87, 95, 917, 1381
BccI CCATC 5 cut(s) 62, 150, 553, 1053, 1351
BcgI CGANNNNNNTGC 2 cut(s) 115, 149
BciT130I CCWGG 1 cut(s) 1241
BciVI GTATCC 1 cut(s) 1162
BcoDI GTCTC 3 cut(s) 194, 459, 1019
BcuI ACTAGT 1 cut(s) 925
BfaI CTAG 2 cut(s) 402, 926
BfmI CTRYAG 2 cut(s) 118, 316
BfoI RGCGCY 2 cut(s) 253, 620
BfuAI ACCTGC 1 cut(s) 98
BfuI GTATCC 1 cut(s) 1162
BisI GCNGC 6 cut(s) 81, 84, 101, 615, 906, 1395
BlpI GCTNAGC 1 cut(s) 1503
BlsI GCNGC 6 cut(s) 82, 85, 102, 616, 907, 1396
Bme1390I CCNGG 1 cut(s) 1241
Bme18I GGWCC 3 cut(s) 139, 292, 475
BmgT120I GGNCC 5 cut(s) 139, 292, 475, 734, 1471
BmiI GGNNCC 6 cut(s) 414, 618, 819, 900, 1341, 1472
BmrFI CCNGG 1 cut(s) 1241
BmsI GCATC 3 cut(s) 450, 1127, 1492
BpiI GAAGAC 1 cut(s) 883
BpmI CTGGAG 2 cut(s) 284, 1453
Bpu1102I GCTNAGC 1 cut(s) 1503
BsaHI GRCGYC 2 cut(s) 617, 682
BsaI GGTCTC 2 cut(s) 194, 459
BsaJI CCNNGG 2 cut(s) 209, 1239
BsaWI WCCGGW 1 cut(s) 415
Bsc4I CCNNNNNNNGG 3 cut(s) 66, 210, 289
Bse118I RCCGGY 2 cut(s) 619, 970
Bse1I ACTGG 4 cut(s) 852, 922, 1335, 1474
BseBI CCWGG 1 cut(s) 1241
BseDI CCNNGG 2 cut(s) 209, 1239
BseGI GGATG 3 cut(s) 768, 1134, 1483
BseLI CCNNNNNNNGG 3 cut(s) 66, 210, 289
BseMII CTCAG 3 cut(s) 336, 974, 1494
BseNI ACTGG 4 cut(s) 852, 922, 1335, 1474
BseSI GKGCMC 1 cut(s) 820
BseXI GCAGC 4 cut(s) 87, 95, 917, 1381
BsgI GTGCAG 1 cut(s) 1290
Bsh1236I CGCG 1 cut(s) 608
BshFI GGCC 3 cut(s) 309, 735, 1473
BshNI GGYRCC 4 cut(s) 616, 817, 898, 1339
BsiHKAI GWGCWC 1 cut(s) 128
BsiSI CCGG 3 cut(s) 416, 620, 971
BslFI GGGAC 4 cut(s) 566, 712, 810, 925
BslI CCNNNNNNNGG 3 cut(s) 66, 210, 289
BsmAI GTCTC 3 cut(s) 194, 459, 1019
BsmFI GGGAC 4 cut(s) 566, 712, 810, 925
BsnI GGCC 3 cut(s) 309, 735, 1473
Bso31I GGTCTC 2 cut(s) 194, 459
Bsp1286I GDGCHC 2 cut(s) 128, 820
Bsp143I GATC 5 cut(s) 412, 432, 1033, 1382, 1530
Bsp1720I GCTNAGC 1 cut(s) 1503
BspACI CCGC 6 cut(s) 81, 608, 614, 775, 921, 1223
BspANI GGCC 3 cut(s) 309, 735, 1473
BspCNI CTCAG 3 cut(s) 335, 973, 1495
BspFNI CGCG 1 cut(s) 608
BspHI TCATGA 1 cut(s) 1108
BspLI GGNNCC 6 cut(s) 414, 618, 819, 900, 1341, 1472
BspMI ACCTGC 1 cut(s) 98
BspPI GGATC 4 cut(s) 407, 420, 1028, 1377
BspT107I GGYRCC 4 cut(s) 616, 817, 898, 1339
BspTNI GGTCTC 2 cut(s) 194, 459
BsrFI RCCGGY 2 cut(s) 619, 970
BsrI ACTGG 4 cut(s) 852, 922, 1335, 1474
BssAI RCCGGY 2 cut(s) 619, 970
BssECI CCNNGG 2 cut(s) 209, 1239
BssMI GATC 5 cut(s) 412, 432, 1033, 1382, 1530
BssNAI GTATAC 1 cut(s) 1540
BssNI GRCGYC 2 cut(s) 617, 682
BssT1I CCWWGG 1 cut(s) 209
Bst1107I GTATAC 1 cut(s) 1540
Bst2UI CCWGG 1 cut(s) 1241
Bst4CI ACNGT 3 cut(s) 331, 1218, 1544
Bst6I CTCTTC 1 cut(s) 177
BstACI GRCGYC 2 cut(s) 617, 682
BstC8I GCNNGC 2 cut(s) 156, 999
BstDEI CTNAG 4 cut(s) 322, 960, 1317, 1503
BstF5I GGATG 3 cut(s) 768, 1134, 1483
BstFNI CGCG 1 cut(s) 608
BstH2I RGCGCY 2 cut(s) 253, 620
BstHHI GCGC 2 cut(s) 252, 619
BstKTI GATC 5 cut(s) 415, 435, 1036, 1385, 1533
BstMAI GTCTC 3 cut(s) 194, 459, 1019
BstMBI GATC 5 cut(s) 412, 432, 1033, 1382, 1530
BstMWI GCNNNNNNNGC 6 cut(s) 526, 614, 719, 815, 905, 1151
BstNI CCWGG 1 cut(s) 1241
BstNSI RCATGY 2 cut(s) 781, 1083
BstSCI CCNGG 1 cut(s) 1239
BstSFI CTRYAG 2 cut(s) 118, 316
BstSLI GKGCMC 1 cut(s) 820
BstUI CGCG 1 cut(s) 608
BstV1I GCAGC 4 cut(s) 87, 95, 917, 1381
BstV2I GAAGAC 1 cut(s) 883
BstX2I RGATCY 3 cut(s) 412, 1033, 1382
BstXI CCANNNNNNTGG 1 cut(s) 828
BstYI RGATCY 3 cut(s) 412, 1033, 1382
BstZ17I GTATAC 1 cut(s) 1540
BsuI GTATCC 1 cut(s) 1162
BsuRI GGCC 3 cut(s) 309, 735, 1473
BtgZI GCGATG 1 cut(s) 128
BtsCI GGATG 3 cut(s) 768, 1134, 1483
BtsI GCAGTG 1 cut(s) 729
BtsIMutI CAGTG 4 cut(s) 327, 729, 1214, 1328
BveI ACCTGC 1 cut(s) 98
Cac8I GCNNGC 2 cut(s) 156, 999
CaiI CAGNNNCTG 3 cut(s) 25, 329, 1480
CciI TCATGA 1 cut(s) 1108
CfoI GCGC 2 cut(s) 252, 619
Cfr10I RCCGGY 2 cut(s) 619, 970
Cfr13I GGNCC 5 cut(s) 139, 292, 475, 734, 1471
CseI GACGC 1 cut(s) 671
Csp6I GTAC 5 cut(s) 190, 493, 634, 1157, 1561
CviQI GTAC 5 cut(s) 190, 493, 634, 1157, 1561
DdeI CTNAG 4 cut(s) 322, 960, 1317, 1503
DinI GGCGCC 1 cut(s) 618
DpnI GATC 5 cut(s) 414, 434, 1035, 1384, 1532
DpnII GATC 5 cut(s) 412, 432, 1033, 1382, 1530
DraI TTTAAA 1 cut(s) 889
DrdI GACNNNNNNGTC 1 cut(s) 137
DseDI GACNNNNNNGTC 1 cut(s) 137
Eam1104I CTCTTC 1 cut(s) 177
EarI CTCTTC 1 cut(s) 177
EciI GGCGGA 1 cut(s) 936
Eco130I CCWWGG 1 cut(s) 209
Eco31I GGTCTC 2 cut(s) 194, 459
Eco47I GGWCC 3 cut(s) 139, 292, 475
Eco47III AGCGCT 1 cut(s) 251
EcoRII CCWGG 1 cut(s) 1239
EcoT14I CCWWGG 1 cut(s) 209
EcoT22I ATGCAT 1 cut(s) 811
EgeI GGCGCC 1 cut(s) 618
EheI GGCGCC 1 cut(s) 618
ErhI CCWWGG 1 cut(s) 209
FaqI GGGAC 4 cut(s) 566, 712, 810, 925
FauI CCCGC 1 cut(s) 1230
FblI GTMKAC 1 cut(s) 1539
Fnu4HI GCNGC 6 cut(s) 81, 84, 101, 615, 906, 1395
FokI GGATG 3 cut(s) 755, 1121, 1470
Fsp4HI GCNGC 6 cut(s) 81, 84, 101, 615, 906, 1395
FspBI CTAG 2 cut(s) 402, 926
GlaI GCGC 2 cut(s) 251, 618
GluI GCNGC 6 cut(s) 81, 84, 101, 615, 906, 1395
GsuI CTGGAG 2 cut(s) 284, 1453
HaeII RGCGCY 2 cut(s) 253, 620
HaeIII GGCC 3 cut(s) 309, 735, 1473
HapII CCGG 3 cut(s) 416, 620, 971
HgaI GACGC 1 cut(s) 671
HhaI GCGC 2 cut(s) 252, 619
Hin1I GRCGYC 2 cut(s) 617, 682
Hin6I GCGC 2 cut(s) 250, 617
HinP1I GCGC 2 cut(s) 250, 617
HincII GTYRAC 1 cut(s) 399
HindII GTYRAC 1 cut(s) 399
HinfI GANTC 4 cut(s) 5, 700, 935, 1235
HpaII CCGG 3 cut(s) 416, 620, 971
HphI GGTGA 3 cut(s) 430, 679, 944
Hpy166II GTNNAC 6 cut(s) 295, 337, 399, 475, 634, 1540
Hpy188I TCNGA 6 cut(s) 61, 108, 325, 367, 459, 963
Hpy188III TCNNGA 4 cut(s) 301, 1109, 1347, 1432
Hpy8I GTNNAC 6 cut(s) 295, 337, 399, 475, 634, 1540
HpyAV CCTTC 2 cut(s) 539, 1108
HpyCH4III ACNGT 3 cut(s) 331, 1218, 1544
HpyCH4IV ACGT 1 cut(s) 1104
HpyCH4V TGCA 7 cut(s) 484, 722, 809, 1001, 1154, 1307, 1483
HpyF10VI GCNNNNNNNGC 6 cut(s) 526, 614, 719, 815, 905, 1151
HpyF3I CTNAG 4 cut(s) 322, 960, 1317, 1503
HpySE526I ACGT 1 cut(s) 1104
Hsp92I GRCGYC 2 cut(s) 617, 682
HspAI GCGC 2 cut(s) 250, 617
KasI GGCGCC 1 cut(s) 616
Kzo9I GATC 5 cut(s) 412, 432, 1033, 1382, 1530
LmnI GCTCC 2 cut(s) 123, 1434
Lsp1109I GCAGC 4 cut(s) 87, 95, 917, 1381
LweI GCATC 3 cut(s) 450, 1127, 1492
MaeI CTAG 2 cut(s) 402, 926
MaeII ACGT 1 cut(s) 1104
MaeIII GTNAC 1 cut(s) 1387
MalI GATC 5 cut(s) 414, 434, 1035, 1384, 1532
MboI GATC 5 cut(s) 412, 432, 1033, 1382, 1530
MboII GAAGA 3 cut(s) 67, 164, 888
MfeI CAATTG 1 cut(s) 1197
MflI RGATCY 3 cut(s) 412, 1033, 1382
MhlI GDGCHC 2 cut(s) 128, 820
MluCI AATT 7 cut(s) 406, 428, 823, 891, 1162, 1197, 1310
Mly113I GGCGCC 1 cut(s) 617
MlyI GAGTC 1 cut(s) 694
Mph1103I ATGCAT 1 cut(s) 811
MseI TTAA 3 cut(s) 888, 1376, 1580
MslI CAYNNNNRTG 2 cut(s) 1107, 1286
MspA1I CMGCKG 1 cut(s) 1394
MspI CCGG 3 cut(s) 416, 620, 971
MspR9I CCNGG 1 cut(s) 1241
MunI CAATTG 1 cut(s) 1197
MvaI CCWGG 1 cut(s) 1241
MvnI CGCG 1 cut(s) 608
MwoI GCNNNNNNNGC 6 cut(s) 526, 614, 719, 815, 905, 1151
NarI GGCGCC 1 cut(s) 617
NdeII GATC 5 cut(s) 412, 432, 1033, 1382, 1530
NlaIV GGNNCC 6 cut(s) 414, 618, 819, 900, 1341, 1472
NsiI ATGCAT 1 cut(s) 811
NspI RCATGY 2 cut(s) 781, 1083
PagI TCATGA 1 cut(s) 1108
PaqCI CACCTGC 1 cut(s) 98
PciI ACATGT 1 cut(s) 1079
PfeI GAWTC 3 cut(s) 5, 935, 1235
PflFI GACNNNGTC 1 cut(s) 801
PflMI CCANNNNNTGG 1 cut(s) 210
PkrI GCNGC 6 cut(s) 82, 85, 102, 616, 907, 1396
PleI GAGTC 1 cut(s) 694
PluTI GGCGCC 1 cut(s) 620
PpsI GAGTC 1 cut(s) 694
PscI ACATGT 1 cut(s) 1079
Psp6I CCWGG 1 cut(s) 1239
PspGI CCWGG 1 cut(s) 1239
PspN4I GGNNCC 6 cut(s) 414, 618, 819, 900, 1341, 1472
PspPI GGNCC 5 cut(s) 139, 292, 475, 734, 1471
PstNI CAGNNNCTG 3 cut(s) 25, 329, 1480
PsuI RGATCY 3 cut(s) 412, 1033, 1382
PsyI GACNNNGTC 1 cut(s) 801
PvuII CAGCTG 1 cut(s) 1394
RsaI GTAC 5 cut(s) 191, 494, 635, 1158, 1562
RsaNI GTAC 5 cut(s) 190, 493, 634, 1157, 1561
RseI CAYNNNNRTG 2 cut(s) 1107, 1286
SaqAI TTAA 3 cut(s) 888, 1376, 1580
SatI GCNGC 6 cut(s) 81, 84, 101, 615, 906, 1395
Sau3AI GATC 5 cut(s) 412, 432, 1033, 1382, 1530
Sau96I GGNCC 5 cut(s) 139, 292, 475, 734, 1471
SchI GAGTC 1 cut(s) 694
ScrFI CCNGG 1 cut(s) 1241
SduI GDGCHC 2 cut(s) 128, 820
SfaNI GCATC 3 cut(s) 450, 1127, 1492
SfcI CTRYAG 2 cut(s) 118, 316
SfoI GGCGCC 1 cut(s) 618
SgrAI CRCCGGYG 1 cut(s) 970
SinI GGWCC 3 cut(s) 139, 292, 475
SmiMI CAYNNNNRTG 2 cut(s) 1107, 1286
SpeI ACTAGT 1 cut(s) 925
Sse9I AATT 7 cut(s) 406, 428, 823, 891, 1162, 1197, 1310
SsiI CCGC 6 cut(s) 81, 608, 614, 775, 921, 1223
SspDI GGCGCC 1 cut(s) 616
SspMI CTAG 2 cut(s) 402, 926
StyD4I CCNGG 1 cut(s) 1239
StyI CCWWGG 1 cut(s) 209
TaaI ACNGT 3 cut(s) 331, 1218, 1544
TaiI ACGT 1 cut(s) 1107
TaqI TCGA 2 cut(s) 135, 246
TasI AATT 7 cut(s) 406, 428, 823, 891, 1162, 1197, 1310
TatI WGTACW 3 cut(s) 492, 1156, 1560
TauI GCSGC 2 cut(s) 83, 617
TfiI GAWTC 3 cut(s) 5, 935, 1235
Tru1I TTAA 3 cut(s) 888, 1376, 1580
Tru9I TTAA 3 cut(s) 888, 1376, 1580
TscAI CASTG 4 cut(s) 334, 729, 1221, 1335
TseI GCWGC 4 cut(s) 83, 100, 905, 1394
TspDTI ATGAA 3 cut(s) 900, 1097, 1587
TspGWI ACGGA 1 cut(s) 1375
TspRI CASTG 4 cut(s) 334, 729, 1221, 1335
Tth111I GACNNNGTC 1 cut(s) 801
Van91I CCANNNNNTGG 1 cut(s) 210
VpaK11BI GGWCC 3 cut(s) 139, 292, 475
XapI RAATTY 4 cut(s) 406, 823, 891, 1162
XceI RCATGY 2 cut(s) 781, 1083
XcmI CCANNNNNNNNNTGG 1 cut(s) 302
XmiI GTMKAC 1 cut(s) 1539
XspI CTAG 2 cut(s) 402, 926
Zsp2I ATGCAT 1 cut(s) 811
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.