RING-type E3 ubiquitin transferase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g32250 |
| malus_domestica | MD01G1085600.v1.1 MD07G1154800.v1.1 MD07G1295700.v1.1 |
| prunus_persica | Prupe.2G193400_v2.0.a1 Prupe.2G315200_v2.0.a1 Prupe.2G315200_v2.0.a1 Prupe.2G315200_v2.0.a1 Prupe.2G315200_v2.0.a1 Prupe.2G315200_v2.0.a1 Prupe.2G315200_v2.0.a1 |
| pyrus_communis | pycom07g15200 pycom07g26840 |
| rosa_chinensis | RchiOBHm_Chr1g0360521 RchiOBHm_Chr1g0381931 |
| rosa_laevigata | RLG00000026199 RLG00000027799 |
| rosa_multiflora | Rmu_sc0010238.1_g000006 Rmu_ssc0000337.1_g000005 |
| rosa_roxburghii | Rroxscaffold_4G00278330 Rroxscaffold_4G00296020 |
| rosa_rugosa | Rorug01G0279400 Rorug01G0279500 Rorug01G0279600 Rorug01G0279700 Rorug01G0432300 |
| rosa_samantha | Rh1AG291700 Rh1AG455500 Rh1BG256700 Rh1BG412700 Rh1CG274400 Rh1CG427500 Rh1DG286500 Rh1DG445000 |
| rosa_wichuraiana | Rw1G025840 Rw1G041360 Rw1G041490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1724 |
| AatII | GACGTC | 1 cut(s) | 93 |
| Acc36I | ACCTGC | 2 cut(s) | 1095, 1724 |
| AccB1I | GGYRCC | 1 cut(s) | 1275 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 797 |
| AciI | CCGC | 1 cut(s) | 896 |
| AclWI | GGATC | 2 cut(s) | 516, 1074 |
| AcsI | RAATTY | 2 cut(s) | 599, 1558 |
| AcuI | CTGAAG | 4 cut(s) | 15, 758, 906, 1044 |
| AcyI | GRCGYC | 2 cut(s) | 90, 1276 |
| AdeI | CACNNNGTG | 2 cut(s) | 1649, 1862 |
| AfaI | GTAC | 1 cut(s) | 1617 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 223, 797, 1093, 1164, 1285, 1591, 1712 |
| AgsI | TTSAA | 9 cut(s) | 68, 166, 398, 583, 1136, 1253, 1364, 1498, 1607 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1447 |
| AjnI | CCWGG | 4 cut(s) | 83, 492, 639, 902 |
| Alw21I | GWGCWC | 3 cut(s) | 1044, 1684, 1801 |
| Alw26I | GTCTC | 4 cut(s) | 1077, 1338, 1416, 1645 |
| AlwI | GGATC | 2 cut(s) | 516, 1074 |
| Ama87I | CYCGRG | 1 cut(s) | 1157 |
| AoxI | GGCC | 2 cut(s) | 57, 932 |
| ApeKI | GCWGC | 9 cut(s) | 77, 236, 446, 695, 1415, 1507, 1510, 1805, 1808 |
| ApoI | RAATTY | 2 cut(s) | 599, 1558 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1004, 1036, 1748, 1780 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 465, 728 |
| AspLEI | GCGC | 1 cut(s) | 1278 |
| AspS9I | GGNCC | 3 cut(s) | 933, 1526, 1622 |
| AsuHPI | GGTGA | 3 cut(s) | 1210, 1661, 1839 |
| AvaI | CYCGRG | 1 cut(s) | 1157 |
| AvaII | GGWCC | 2 cut(s) | 1526, 1622 |
| AxyI | CCTNAGG | 1 cut(s) | 708 |
| BanI | GGYRCC | 1 cut(s) | 1275 |
| BanII | GRGCYC | 1 cut(s) | 1684 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1599, 1631 |
| BauI | CACGAG | 1 cut(s) | 1428 |
| BbsI | GAAGAC | 2 cut(s) | 1032, 1868 |
| Bbv12I | GWGCWC | 3 cut(s) | 1044, 1684, 1801 |
| BbvI | GCAGC | 9 cut(s) | 64, 223, 458, 707, 1402, 1494, 1522, 1817, 1820 |
| BccI | CCATC | 3 cut(s) | 652, 872, 1717 |
| BceAI | ACGGC | 2 cut(s) | 947, 1263 |
| BciT130I | CCWGG | 4 cut(s) | 85, 494, 641, 904 |
| BciVI | GTATCC | 1 cut(s) | 100 |
| BclI | TGATCA | 1 cut(s) | 1768 |
| BcoDI | GTCTC | 4 cut(s) | 1077, 1338, 1416, 1645 |
| BfaI | CTAG | 3 cut(s) | 350, 1698, 1826 |
| BfmI | CTRYAG | 6 cut(s) | 317, 450, 858, 1508, 1521, 1718 |
| BfoI | RGCGCY | 1 cut(s) | 1279 |
| BfuAI | ACCTGC | 2 cut(s) | 1095, 1724 |
| BfuI | GTATCC | 1 cut(s) | 100 |
| BisI | GCNGC | 9 cut(s) | 78, 237, 447, 696, 1416, 1508, 1511, 1806, 1809 |
| BlsI | GCNGC | 9 cut(s) | 79, 238, 448, 697, 1417, 1509, 1512, 1807, 1810 |
| BmcAI | AGTACT | 1 cut(s) | 1617 |
| Bme1390I | CCNGG | 4 cut(s) | 85, 494, 641, 904 |
| Bme18I | GGWCC | 2 cut(s) | 1526, 1622 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1447 |
| BmeT110I | CYCGRG | 1 cut(s) | 1157 |
| BmgT120I | GGNCC | 3 cut(s) | 933, 1526, 1622 |
| BmiI | GGNNCC | 4 cut(s) | 768, 816, 1277, 1623 |
| BmrFI | CCNGG | 4 cut(s) | 85, 494, 641, 904 |
| BmrI | ACTGGG | 2 cut(s) | 807, 1628 |
| BmsI | GCATC | 8 cut(s) | 26, 682, 1099, 1204, 1562, 1831, 1847, 1895 |
| BmuI | ACTGGG | 2 cut(s) | 807, 1628 |
| BpiI | GAAGAC | 2 cut(s) | 1032, 1868 |
| Bpu10I | CCTNAGC | 1 cut(s) | 629 |
| BpuEI | CTTGAG | 1 cut(s) | 1001 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1407 |
| BsaHI | GRCGYC | 2 cut(s) | 90, 1276 |
| BsaI | GGTCTC | 2 cut(s) | 1077, 1645 |
| BsaJI | CCNNGG | 2 cut(s) | 84, 1218 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 892, 922, 1113, 1143 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 223, 797, 1093, 1164, 1285, 1591, 1712 |
| Bse1I | ACTGG | 3 cut(s) | 802, 1068, 1623 |
| Bse21I | CCTNAGG | 1 cut(s) | 708 |
| Bse3DI | GCAATG | 5 cut(s) | 292, 784, 1045, 1307, 1748 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1407 |
| BseBI | CCWGG | 4 cut(s) | 85, 494, 641, 904 |
| BseDI | CCNNGG | 2 cut(s) | 84, 1218 |
| BseGI | GGATG | 3 cut(s) | 213, 383, 808 |
| BseJI | GATNNNNATC | 1 cut(s) | 1407 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 223, 797, 1093, 1164, 1285, 1591, 1712 |
| BseMI | GCAATG | 5 cut(s) | 292, 784, 1045, 1307, 1748 |
| BseMII | CTCAG | 6 cut(s) | 180, 426, 558, 699, 938, 1470 |
| BseNI | ACTGG | 3 cut(s) | 802, 1068, 1623 |
| BseRI | GAGGAG | 2 cut(s) | 725, 1046 |
| BseXI | GCAGC | 9 cut(s) | 64, 223, 458, 707, 1402, 1494, 1522, 1817, 1820 |
| BsgI | GTGCAG | 1 cut(s) | 1758 |
| BshFI | GGCC | 2 cut(s) | 59, 934 |
| BshNI | GGYRCC | 1 cut(s) | 1275 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1044, 1684, 1801 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1157 |
| BsiSI | CCGG | 1 cut(s) | 26 |
| BslFI | GGGAC | 2 cut(s) | 101, 131 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 223, 797, 1093, 1164, 1285, 1591, 1712 |
| BsmAI | GTCTC | 4 cut(s) | 1077, 1338, 1416, 1645 |
| BsmBI | CGTCTC | 1 cut(s) | 1416 |
| BsmFI | GGGAC | 2 cut(s) | 101, 131 |
| BsmI | GAATGC | 1 cut(s) | 184 |
| BsnI | GGCC | 2 cut(s) | 59, 934 |
| Bso31I | GGTCTC | 2 cut(s) | 1077, 1645 |
| BsoBI | CYCGRG | 1 cut(s) | 1157 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1044, 1684, 1801 |
| Bsp143I | GATC | 5 cut(s) | 336, 508, 743, 1066, 1768 |
| BspACI | CCGC | 1 cut(s) | 896 |
| BspANI | GGCC | 2 cut(s) | 59, 934 |
| BspCNI | CTCAG | 6 cut(s) | 181, 427, 559, 700, 939, 1469 |
| BspLI | GGNNCC | 4 cut(s) | 768, 816, 1277, 1623 |
| BspMAI | CTGCAG | 2 cut(s) | 1512, 1722 |
| BspMI | ACCTGC | 2 cut(s) | 1095, 1724 |
| BspPI | GGATC | 2 cut(s) | 516, 1074 |
| BspQI | GCTCTTC | 1 cut(s) | 360 |
| BspT107I | GGYRCC | 1 cut(s) | 1275 |
| BspTNI | GGTCTC | 2 cut(s) | 1077, 1645 |
| BsrDI | GCAATG | 5 cut(s) | 292, 784, 1045, 1307, 1748 |
| BsrI | ACTGG | 3 cut(s) | 802, 1068, 1623 |
| BssECI | CCNNGG | 2 cut(s) | 84, 1218 |
| BssMI | GATC | 5 cut(s) | 336, 508, 743, 1066, 1768 |
| BssNI | GRCGYC | 2 cut(s) | 90, 1276 |
| BssSI | CACGAG | 1 cut(s) | 1428 |
| BssT1I | CCWWGG | 1 cut(s) | 1218 |
| Bst2BI | CACGAG | 1 cut(s) | 1428 |
| Bst2UI | CCWGG | 4 cut(s) | 85, 494, 641, 904 |
| Bst4CI | ACNGT | 4 cut(s) | 52, 178, 1208, 1785 |
| Bst6I | CTCTTC | 2 cut(s) | 360, 456 |
| BstACI | GRCGYC | 2 cut(s) | 90, 1276 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 14 |
| BstC8I | GCNNGC | 1 cut(s) | 1831 |
| BstDEI | CTNAG | 9 cut(s) | 189, 435, 567, 629, 708, 735, 947, 1456, 1685 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1091 |
| BstF5I | GGATG | 3 cut(s) | 213, 383, 808 |
| BstH2I | RGCGCY | 1 cut(s) | 1279 |
| BstHHI | GCGC | 1 cut(s) | 1278 |
| BstKTI | GATC | 5 cut(s) | 339, 511, 746, 1069, 1771 |
| BstMAI | GTCTC | 4 cut(s) | 1077, 1338, 1416, 1645 |
| BstMBI | GATC | 5 cut(s) | 336, 508, 743, 1066, 1768 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 14, 452, 695, 1424, 1679, 1805, 1835 |
| BstNI | CCWGG | 4 cut(s) | 85, 494, 641, 904 |
| BstSCI | CCNGG | 4 cut(s) | 83, 492, 639, 902 |
| BstSFI | CTRYAG | 6 cut(s) | 317, 450, 858, 1508, 1521, 1718 |
| BstV1I | GCAGC | 9 cut(s) | 64, 223, 458, 707, 1402, 1494, 1522, 1817, 1820 |
| BstV2I | GAAGAC | 2 cut(s) | 1032, 1868 |
| BstX2I | RGATCY | 1 cut(s) | 1066 |
| BstYI | RGATCY | 1 cut(s) | 1066 |
| Bsu36I | CCTNAGG | 1 cut(s) | 708 |
| BsuI | GTATCC | 1 cut(s) | 100 |
| BsuRI | GGCC | 2 cut(s) | 59, 934 |
| BtsCI | GGATG | 3 cut(s) | 213, 383, 808 |
| BtsI | GCAGTG | 1 cut(s) | 1308 |
| BtsIMutI | CAGTG | 4 cut(s) | 795, 1213, 1308, 1781 |
| BveI | ACCTGC | 2 cut(s) | 1095, 1724 |
| Cac8I | GCNNGC | 1 cut(s) | 1831 |
| CfoI | GCGC | 1 cut(s) | 1278 |
| Cfr13I | GGNCC | 3 cut(s) | 933, 1526, 1622 |
| CseI | GACGC | 2 cut(s) | 1433, 1502 |
| Csp6I | GTAC | 1 cut(s) | 1616 |
| CviAII | CATG | 6 cut(s) | 985, 1390, 1549, 1646, 1802, 1819 |
| CviQI | GTAC | 1 cut(s) | 1616 |
| DdeI | CTNAG | 9 cut(s) | 189, 435, 567, 629, 708, 735, 947, 1456, 1685 |
| DinI | GGCGCC | 1 cut(s) | 1277 |
| DpnI | GATC | 5 cut(s) | 338, 510, 745, 1068, 1770 |
| DpnII | GATC | 5 cut(s) | 336, 508, 743, 1066, 1768 |
| DraIII | CACNNNGTG | 2 cut(s) | 1649, 1862 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1447 |
| Eam1104I | CTCTTC | 2 cut(s) | 360, 456 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1447 |
| EarI | CTCTTC | 2 cut(s) | 360, 456 |
| Ecl136II | GAGCTC | 1 cut(s) | 1682 |
| Eco130I | CCWWGG | 1 cut(s) | 1218 |
| Eco24I | GRGCYC | 1 cut(s) | 1684 |
| Eco31I | GGTCTC | 2 cut(s) | 1077, 1645 |
| Eco47I | GGWCC | 2 cut(s) | 1526, 1622 |
| Eco53kI | GAGCTC | 1 cut(s) | 1682 |
| Eco57I | CTGAAG | 4 cut(s) | 15, 758, 906, 1044 |
| Eco81I | CCTNAGG | 1 cut(s) | 708 |
| Eco88I | CYCGRG | 1 cut(s) | 1157 |
| EcoICRI | GAGCTC | 1 cut(s) | 1682 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1091 |
| EcoRI | GAATTC | 1 cut(s) | 599 |
| EcoRII | CCWGG | 4 cut(s) | 83, 492, 639, 902 |
| EcoT14I | CCWWGG | 1 cut(s) | 1218 |
| EcoT22I | ATGCAT | 2 cut(s) | 294, 1824 |
| EcoT38I | GRGCYC | 1 cut(s) | 1684 |
| EgeI | GGCGCC | 1 cut(s) | 1277 |
| EheI | GGCGCC | 1 cut(s) | 1277 |
| ErhI | CCWWGG | 1 cut(s) | 1218 |
| Esp3I | CGTCTC | 1 cut(s) | 1416 |
| FaeI | CATG | 6 cut(s) | 988, 1393, 1552, 1649, 1805, 1822 |
| FaqI | GGGAC | 2 cut(s) | 101, 131 |
| FatI | CATG | 6 cut(s) | 984, 1389, 1548, 1645, 1801, 1818 |
| FbaI | TGATCA | 1 cut(s) | 1768 |
| Fnu4HI | GCNGC | 9 cut(s) | 78, 237, 447, 696, 1416, 1508, 1511, 1806, 1809 |
| FokI | GGATG | 3 cut(s) | 200, 370, 815 |
| FriOI | GRGCYC | 1 cut(s) | 1684 |
| Fsp4HI | GCNGC | 9 cut(s) | 78, 237, 447, 696, 1416, 1508, 1511, 1806, 1809 |
| FspBI | CTAG | 3 cut(s) | 350, 1698, 1826 |
| GlaI | GCGC | 1 cut(s) | 1277 |
| GluI | GCNGC | 9 cut(s) | 78, 237, 447, 696, 1416, 1508, 1511, 1806, 1809 |
| HaeII | RGCGCY | 1 cut(s) | 1279 |
| HaeIII | GGCC | 2 cut(s) | 59, 934 |
| HapII | CCGG | 1 cut(s) | 26 |
| HgaI | GACGC | 2 cut(s) | 1433, 1502 |
| HhaI | GCGC | 1 cut(s) | 1278 |
| Hin1I | GRCGYC | 2 cut(s) | 90, 1276 |
| Hin1II | CATG | 6 cut(s) | 988, 1393, 1552, 1649, 1805, 1822 |
| Hin6I | GCGC | 1 cut(s) | 1276 |
| HinP1I | GCGC | 1 cut(s) | 1276 |
| HincII | GTYRAC | 4 cut(s) | 310, 758, 1183, 1578 |
| HindII | GTYRAC | 4 cut(s) | 310, 758, 1183, 1578 |
| HindIII | AAGCTT | 1 cut(s) | 1789 |
| HinfI | GANTC | 7 cut(s) | 466, 482, 489, 558, 907, 1168, 1595 |
| HpaI | GTTAAC | 1 cut(s) | 310 |
| HpaII | CCGG | 1 cut(s) | 26 |
| HphI | GGTGA | 3 cut(s) | 1210, 1661, 1839 |
| Hpy166II | GTNNAC | 6 cut(s) | 310, 758, 1076, 1183, 1578, 1625 |
| Hpy188I | TCNGA | 8 cut(s) | 34, 190, 388, 605, 948, 1024, 1459, 1679 |
| Hpy188III | TCNNGA | 8 cut(s) | 209, 470, 486, 707, 834, 1094, 1631, 1890 |
| Hpy8I | GTNNAC | 6 cut(s) | 310, 758, 1076, 1183, 1578, 1625 |
| HpyCH4III | ACNGT | 4 cut(s) | 52, 178, 1208, 1785 |
| HpyCH4IV | ACGT | 3 cut(s) | 90, 110, 1653 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 14, 452, 695, 1424, 1679, 1805, 1835 |
| HpyF3I | CTNAG | 9 cut(s) | 189, 435, 567, 629, 708, 735, 947, 1456, 1685 |
| HpySE526I | ACGT | 3 cut(s) | 90, 110, 1653 |
| Hsp92I | GRCGYC | 2 cut(s) | 90, 1276 |
| Hsp92II | CATG | 6 cut(s) | 988, 1393, 1552, 1649, 1805, 1822 |
| HspAI | GCGC | 1 cut(s) | 1276 |
| KasI | GGCGCC | 1 cut(s) | 1275 |
| Ksp22I | TGATCA | 1 cut(s) | 1768 |
| KspAI | GTTAAC | 1 cut(s) | 310 |
| Kzo9I | GATC | 5 cut(s) | 336, 508, 743, 1066, 1768 |
| LguI | GCTCTTC | 1 cut(s) | 360 |
| LmnI | GCTCC | 5 cut(s) | 28, 431, 766, 814, 1047 |
| Lsp1109I | GCAGC | 9 cut(s) | 64, 223, 458, 707, 1402, 1494, 1522, 1817, 1820 |
| LweI | GCATC | 8 cut(s) | 26, 682, 1099, 1204, 1562, 1831, 1847, 1895 |
| MaeI | CTAG | 3 cut(s) | 350, 1698, 1826 |
| MaeII | ACGT | 3 cut(s) | 90, 110, 1653 |
| MaeIII | GTNAC | 5 cut(s) | 341, 416, 1266, 1384, 1649 |
| MalI | GATC | 5 cut(s) | 338, 510, 745, 1068, 1770 |
| MboI | GATC | 5 cut(s) | 336, 508, 743, 1066, 1768 |
| MflI | RGATCY | 1 cut(s) | 1066 |
| MhlI | GDGCHC | 3 cut(s) | 1044, 1684, 1801 |
| Mly113I | GGCGCC | 1 cut(s) | 1276 |
| MlyI | GAGTC | 3 cut(s) | 491, 901, 1604 |
| MmeI | TCCRAC | 3 cut(s) | 411, 535, 1419 |
| Mph1103I | ATGCAT | 2 cut(s) | 294, 1824 |
| MroXI | GAANNNNTTC | 2 cut(s) | 465, 728 |
| MseI | TTAA | 9 cut(s) | 99, 114, 155, 197, 219, 287, 309, 1053, 1190 |
| MslI | CAYNNNNRTG | 2 cut(s) | 989, 1817 |
| MspA1I | CMGCKG | 2 cut(s) | 449, 898 |
| MspI | CCGG | 1 cut(s) | 26 |
| MspR9I | CCNGG | 4 cut(s) | 85, 494, 641, 904 |
| Mva1269I | GAATGC | 1 cut(s) | 184 |
| MvaI | CCWGG | 4 cut(s) | 85, 494, 641, 904 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 14, 452, 695, 1424, 1679, 1805, 1835 |
| NarI | GGCGCC | 1 cut(s) | 1276 |
| NdeII | GATC | 5 cut(s) | 336, 508, 743, 1066, 1768 |
| NlaIII | CATG | 6 cut(s) | 988, 1393, 1552, 1649, 1805, 1822 |
| NlaIV | GGNNCC | 4 cut(s) | 768, 816, 1277, 1623 |
| NmeAIII | GCCGAG | 1 cut(s) | 604 |
| NmuCI | GTSAC | 4 cut(s) | 341, 416, 1266, 1649 |
| NsiI | ATGCAT | 2 cut(s) | 294, 1824 |
| PaqCI | CACCTGC | 1 cut(s) | 1724 |
| PciSI | GCTCTTC | 1 cut(s) | 360 |
| PctI | GAATGC | 1 cut(s) | 184 |
| PdmI | GAANNNNTTC | 2 cut(s) | 465, 728 |
| PfeI | GAWTC | 4 cut(s) | 466, 489, 558, 1168 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 797 |
| PfoI | TCCNGGA | 1 cut(s) | 492 |
| PkrI | GCNGC | 9 cut(s) | 79, 238, 448, 697, 1417, 1509, 1512, 1807, 1810 |
| PleI | GAGTC | 3 cut(s) | 490, 901, 1603 |
| PluTI | GGCGCC | 1 cut(s) | 1279 |
| PpsI | GAGTC | 3 cut(s) | 490, 901, 1603 |
| Psp124BI | GAGCTC | 1 cut(s) | 1684 |
| Psp6I | CCWGG | 4 cut(s) | 83, 492, 639, 902 |
| PspGI | CCWGG | 4 cut(s) | 83, 492, 639, 902 |
| PspN4I | GGNNCC | 4 cut(s) | 768, 816, 1277, 1623 |
| PspPI | GGNCC | 3 cut(s) | 933, 1526, 1622 |
| PstI | CTGCAG | 2 cut(s) | 1512, 1722 |
| PsuI | RGATCY | 1 cut(s) | 1066 |
| PvuII | CAGCTG | 1 cut(s) | 449 |
| RsaI | GTAC | 1 cut(s) | 1617 |
| RsaNI | GTAC | 1 cut(s) | 1616 |
| RseI | CAYNNNNRTG | 2 cut(s) | 989, 1817 |
| SacI | GAGCTC | 1 cut(s) | 1684 |
| SapI | GCTCTTC | 1 cut(s) | 360 |
| SaqAI | TTAA | 9 cut(s) | 99, 114, 155, 197, 219, 287, 309, 1053, 1190 |
| SatI | GCNGC | 9 cut(s) | 78, 237, 447, 696, 1416, 1508, 1511, 1806, 1809 |
| Sau3AI | GATC | 5 cut(s) | 336, 508, 743, 1066, 1768 |
| Sau96I | GGNCC | 3 cut(s) | 933, 1526, 1622 |
| ScaI | AGTACT | 1 cut(s) | 1617 |
| SchI | GAGTC | 3 cut(s) | 491, 901, 1604 |
| ScrFI | CCNGG | 4 cut(s) | 85, 494, 641, 904 |
| SduI | GDGCHC | 3 cut(s) | 1044, 1684, 1801 |
| SfaNI | GCATC | 8 cut(s) | 26, 682, 1099, 1204, 1562, 1831, 1847, 1895 |
| SfcI | CTRYAG | 6 cut(s) | 317, 450, 858, 1508, 1521, 1718 |
| SfoI | GGCGCC | 1 cut(s) | 1277 |
| SinI | GGWCC | 2 cut(s) | 1526, 1622 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 989, 1817 |
| SmlI | CTYRAG | 1 cut(s) | 1016 |
| SmoI | CTYRAG | 1 cut(s) | 1016 |
| SsiI | CCGC | 1 cut(s) | 896 |
| SspDI | GGCGCC | 1 cut(s) | 1275 |
| SspI | AATATT | 1 cut(s) | 728 |
| SspMI | CTAG | 3 cut(s) | 350, 1698, 1826 |
| SstI | GAGCTC | 1 cut(s) | 1684 |
| StyD4I | CCNGG | 4 cut(s) | 83, 492, 639, 902 |
| StyI | CCWWGG | 1 cut(s) | 1218 |
| TaaI | ACNGT | 4 cut(s) | 52, 178, 1208, 1785 |
| TaiI | ACGT | 3 cut(s) | 93, 113, 1656 |
| TaqI | TCGA | 2 cut(s) | 480, 1284 |
| TaqII | GACCGA | 2 cut(s) | 1254, 1595 |
| TatI | WGTACW | 1 cut(s) | 1615 |
| TfiI | GAWTC | 4 cut(s) | 466, 489, 558, 1168 |
| Tru1I | TTAA | 9 cut(s) | 99, 114, 155, 197, 219, 287, 309, 1053, 1190 |
| Tru9I | TTAA | 9 cut(s) | 99, 114, 155, 197, 219, 287, 309, 1053, 1190 |
| TscAI | CASTG | 4 cut(s) | 802, 1213, 1308, 1788 |
| TseFI | GTSAC | 4 cut(s) | 341, 416, 1266, 1649 |
| TseI | GCWGC | 9 cut(s) | 77, 236, 446, 695, 1415, 1507, 1510, 1805, 1808 |
| Tsp45I | GTSAC | 4 cut(s) | 341, 416, 1266, 1649 |
| TspDTI | ATGAA | 6 cut(s) | 28, 372, 690, 773, 1019, 1676 |
| TspRI | CASTG | 4 cut(s) | 802, 1213, 1308, 1788 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 797 |
| VpaK11BI | GGWCC | 2 cut(s) | 1526, 1622 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1091 |
| XapI | RAATTY | 2 cut(s) | 599, 1558 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 529 |
| XmnI | GAANNNNTTC | 2 cut(s) | 465, 728 |
| XspI | CTAG | 3 cut(s) | 350, 1698, 1826 |
| ZraI | GACGTC | 1 cut(s) | 91 |
| ZrmI | AGTACT | 1 cut(s) | 1617 |
| Zsp2I | ATGCAT | 2 cut(s) | 294, 1824 |