RING-type E3 ubiquitin transferase
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g32250 |
| malus_domestica | MD01G1085600.v1.1 MD07G1154800.v1.1 MD07G1295700.v1.1 |
| prunus_persica | Prupe.2G193400_v2.0.a1 Prupe.2G315200_v2.0.a1 Prupe.2G315200_v2.0.a1 Prupe.2G315200_v2.0.a1 Prupe.2G315200_v2.0.a1 Prupe.2G315200_v2.0.a1 Prupe.2G315200_v2.0.a1 |
| pyrus_communis | pycom07g15200 pycom07g26840 |
| rosa_chinensis | RchiOBHm_Chr1g0360521 RchiOBHm_Chr1g0381931 |
| rosa_laevigata | RLG00000026199 RLG00000027799 |
| rosa_multiflora | Rmu_sc0010238.1_g000006 Rmu_ssc0000337.1_g000005 |
| rosa_roxburghii | Rroxscaffold_4G00278330 Rroxscaffold_4G00296020 |
| rosa_rugosa | Rorug01G0279400 Rorug01G0279500 Rorug01G0279600 Rorug01G0279700 Rorug01G0432300 |
| rosa_samantha | Rh1AG291700 Rh1AG455500 Rh1BG256700 Rh1BG412700 Rh1CG274400 Rh1CG427500 Rh1DG286500 Rh1DG445000 |
| rosa_wichuraiana | Rw1G025840 Rw1G041360 Rw1G041490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 2 cut(s) | 79, 355 |
| AcsI | RAATTY | 2 cut(s) | 58, 131 |
| AgsI | TTSAA | 2 cut(s) | 130, 287 |
| AluBI | AGCT | 2 cut(s) | 18, 290 |
| AluI | AGCT | 2 cut(s) | 18, 290 |
| AoxI | GGCC | 2 cut(s) | 79, 355 |
| ApeKI | GCWGC | 1 cut(s) | 326 |
| ApoI | RAATTY | 2 cut(s) | 58, 131 |
| AseI | ATTAAT | 1 cut(s) | 150 |
| BalI | TGGCCA | 2 cut(s) | 81, 357 |
| BanII | GRGCYC | 1 cut(s) | 269 |
| BbvI | GCAGC | 1 cut(s) | 313 |
| BclI | TGATCA | 1 cut(s) | 33 |
| BisI | GCNGC | 1 cut(s) | 327 |
| BlsI | GCNGC | 1 cut(s) | 328 |
| BsaJI | CCNNGG | 1 cut(s) | 276 |
| Bse3DI | GCAATG | 1 cut(s) | 270 |
| BseDI | CCNNGG | 1 cut(s) | 276 |
| BseMI | GCAATG | 1 cut(s) | 270 |
| BseXI | GCAGC | 1 cut(s) | 313 |
| Bsh1285I | CGRYCG | 1 cut(s) | 347 |
| BshFI | GGCC | 2 cut(s) | 81, 357 |
| BsiEI | CGRYCG | 1 cut(s) | 347 |
| BsnI | GGCC | 2 cut(s) | 81, 357 |
| Bsp1286I | GDGCHC | 1 cut(s) | 269 |
| Bsp143I | GATC | 3 cut(s) | 33, 226, 344 |
| Bsp19I | CCATGG | 1 cut(s) | 276 |
| BspANI | GGCC | 2 cut(s) | 81, 357 |
| BspHI | TCATGA | 1 cut(s) | 36 |
| BsrDI | GCAATG | 1 cut(s) | 270 |
| BssECI | CCNNGG | 1 cut(s) | 276 |
| BssMI | GATC | 3 cut(s) | 33, 226, 344 |
| BssT1I | CCWWGG | 1 cut(s) | 276 |
| BstC8I | GCNNGC | 1 cut(s) | 359 |
| BstDSI | CCRYGG | 1 cut(s) | 276 |
| BstKTI | GATC | 3 cut(s) | 36, 229, 347 |
| BstMBI | GATC | 3 cut(s) | 33, 226, 344 |
| BstMCI | CGRYCG | 1 cut(s) | 347 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 296, 363 |
| BstV1I | GCAGC | 1 cut(s) | 313 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 89, 277 |
| BsuRI | GGCC | 2 cut(s) | 81, 357 |
| BtgI | CCRYGG | 1 cut(s) | 276 |
| Cac8I | GCNNGC | 1 cut(s) | 359 |
| CciI | TCATGA | 1 cut(s) | 36 |
| CviAII | CATG | 7 cut(s) | 37, 116, 170, 218, 247, 277, 363 |
| DpnI | GATC | 3 cut(s) | 35, 228, 346 |
| DpnII | GATC | 3 cut(s) | 33, 226, 344 |
| EaeI | YGGCCR | 2 cut(s) | 79, 355 |
| Eco130I | CCWWGG | 1 cut(s) | 276 |
| Eco24I | GRGCYC | 1 cut(s) | 269 |
| EcoT14I | CCWWGG | 1 cut(s) | 276 |
| EcoT38I | GRGCYC | 1 cut(s) | 269 |
| ErhI | CCWWGG | 1 cut(s) | 276 |
| FaeI | CATG | 7 cut(s) | 40, 119, 173, 221, 250, 280, 366 |
| FatI | CATG | 7 cut(s) | 36, 115, 169, 217, 246, 276, 362 |
| FbaI | TGATCA | 1 cut(s) | 33 |
| Fnu4HI | GCNGC | 1 cut(s) | 327 |
| FriOI | GRGCYC | 1 cut(s) | 269 |
| Fsp4HI | GCNGC | 1 cut(s) | 327 |
| GluI | GCNGC | 1 cut(s) | 327 |
| HaeIII | GGCC | 2 cut(s) | 81, 357 |
| Hin1II | CATG | 7 cut(s) | 40, 119, 173, 221, 250, 280, 366 |
| Hpy166II | GTNNAC | 1 cut(s) | 190 |
| Hpy188I | TCNGA | 1 cut(s) | 55 |
| Hpy188III | TCNNGA | 1 cut(s) | 37 |
| Hpy8I | GTNNAC | 1 cut(s) | 190 |
| HpyCH4V | TGCA | 1 cut(s) | 329 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 296, 363 |
| Hsp92II | CATG | 7 cut(s) | 40, 119, 173, 221, 250, 280, 366 |
| Ksp22I | TGATCA | 1 cut(s) | 33 |
| Kzo9I | GATC | 3 cut(s) | 33, 226, 344 |
| LpnPI | CCDG | 3 cut(s) | 79, 158, 371 |
| Lsp1109I | GCAGC | 1 cut(s) | 313 |
| MaeIII | GTNAC | 1 cut(s) | 26 |
| MalI | GATC | 3 cut(s) | 35, 228, 346 |
| MboI | GATC | 3 cut(s) | 33, 226, 344 |
| MboII | GAAGA | 2 cut(s) | 109, 377 |
| MhlI | GDGCHC | 1 cut(s) | 269 |
| MlsI | TGGCCA | 2 cut(s) | 81, 357 |
| MluCI | AATT | 5 cut(s) | 58, 131, 151, 183, 197 |
| MluNI | TGGCCA | 2 cut(s) | 81, 357 |
| MmeI | TCCRAC | 1 cut(s) | 136 |
| MnlI | CCTC | 3 cut(s) | 151, 248, 348 |
| Mox20I | TGGCCA | 2 cut(s) | 81, 357 |
| MscI | TGGCCA | 2 cut(s) | 81, 357 |
| MseI | TTAA | 2 cut(s) | 150, 200 |
| MslI | CAYNNNNRTG | 1 cut(s) | 275 |
| Msp20I | TGGCCA | 2 cut(s) | 81, 357 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 296, 363 |
| NcoI | CCATGG | 1 cut(s) | 276 |
| NdeII | GATC | 3 cut(s) | 33, 226, 344 |
| NlaIII | CATG | 7 cut(s) | 40, 119, 173, 221, 250, 280, 366 |
| NmuCI | GTSAC | 1 cut(s) | 26 |
| PagI | TCATGA | 1 cut(s) | 36 |
| PkrI | GCNGC | 1 cut(s) | 328 |
| Ple19I | CGATCG | 1 cut(s) | 347 |
| PshBI | ATTAAT | 1 cut(s) | 150 |
| PvuI | CGATCG | 1 cut(s) | 347 |
| RseI | CAYNNNNRTG | 1 cut(s) | 275 |
| SaqAI | TTAA | 2 cut(s) | 150, 200 |
| SatI | GCNGC | 1 cut(s) | 327 |
| Sau3AI | GATC | 3 cut(s) | 33, 226, 344 |
| SduI | GDGCHC | 1 cut(s) | 269 |
| SetI | ASST | 5 cut(s) | 9, 20, 240, 292, 340 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 275 |
| Sse9I | AATT | 5 cut(s) | 58, 131, 151, 183, 197 |
| StyI | CCWWGG | 1 cut(s) | 276 |
| TaqI | TCGA | 2 cut(s) | 95, 347 |
| TasI | AATT | 5 cut(s) | 58, 131, 151, 183, 197 |
| Tru1I | TTAA | 2 cut(s) | 150, 200 |
| Tru9I | TTAA | 2 cut(s) | 150, 200 |
| TseFI | GTSAC | 1 cut(s) | 26 |
| TseI | GCWGC | 1 cut(s) | 326 |
| Tsp45I | GTSAC | 1 cut(s) | 26 |
| TspDTI | ATGAA | 4 cut(s) | 17, 53, 132, 360 |
| VspI | ATTAAT | 1 cut(s) | 150 |
| XapI | RAATTY | 2 cut(s) | 58, 131 |