RING-type E3 ubiquitin transferase
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g32250 |
| malus_domestica | MD01G1085600.v1.1 MD07G1154800.v1.1 MD07G1295700.v1.1 |
| prunus_persica | Prupe.2G193400_v2.0.a1 Prupe.2G315200_v2.0.a1 Prupe.2G315200_v2.0.a1 Prupe.2G315200_v2.0.a1 Prupe.2G315200_v2.0.a1 Prupe.2G315200_v2.0.a1 Prupe.2G315200_v2.0.a1 |
| pyrus_communis | pycom07g15200 pycom07g26840 |
| rosa_chinensis | RchiOBHm_Chr1g0360521 RchiOBHm_Chr1g0381931 |
| rosa_laevigata | RLG00000026199 RLG00000027799 |
| rosa_multiflora | Rmu_sc0010238.1_g000006 Rmu_ssc0000337.1_g000005 |
| rosa_roxburghii | Rroxscaffold_4G00278330 Rroxscaffold_4G00296020 |
| rosa_rugosa | Rorug01G0279400 Rorug01G0279500 Rorug01G0279600 Rorug01G0279700 Rorug01G0432300 |
| rosa_samantha | Rh1AG291700 Rh1AG455500 Rh1BG256700 Rh1BG412700 Rh1CG274400 Rh1CG427500 Rh1DG286500 Rh1DG445000 |
| rosa_wichuraiana | Rw1G025840 Rw1G041360 Rw1G041490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 2171, 2789 |
| Acc36I | ACCTGC | 3 cut(s) | 1062, 1786, 1849 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2029 |
| AccBSI | CCGCTC | 1 cut(s) | 437 |
| AccII | CGCG | 5 cut(s) | 512, 1338, 1791, 2541, 2543 |
| AciI | CCGC | 5 cut(s) | 437, 1742, 2332, 2478, 2543 |
| AclWI | GGATC | 6 cut(s) | 494, 557, 797, 810, 1180, 2222 |
| AcsI | RAATTY | 5 cut(s) | 100, 730, 767, 1661, 2175 |
| AcuI | CTGAAG | 6 cut(s) | 746, 894, 1500, 1899, 2430, 2874 |
| AcyI | GRCGYC | 1 cut(s) | 359 |
| AfaI | GTAC | 4 cut(s) | 66, 122, 1314, 2605 |
| AfeI | AGCGCT | 1 cut(s) | 339 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 1093, 1706, 2029, 2163, 2576 |
| AflIII | ACRYGT | 2 cut(s) | 67, 828 |
| AjiI | CACGTC | 1 cut(s) | 1271 |
| AjnI | CCWGG | 1 cut(s) | 627 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2016, 2048 |
| Alw21I | GWGCWC | 4 cut(s) | 1171, 1431, 2359, 2760 |
| Alw26I | GTCTC | 5 cut(s) | 991, 1799, 1999, 2147, 2835 |
| AlwI | GGATC | 6 cut(s) | 494, 557, 797, 810, 1180, 2222 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1925 |
| Ama87I | CYCGRG | 1 cut(s) | 584 |
| Aor51HI | AGCGCT | 1 cut(s) | 339 |
| AoxI | GGCC | 4 cut(s) | 132, 303, 1708, 2634 |
| ApoI | RAATTY | 5 cut(s) | 100, 730, 767, 1661, 2175 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1239, 1271 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 759, 1035, 2084 |
| AspLEI | GCGC | 6 cut(s) | 340, 512, 1791, 2251, 2541, 2543 |
| AspS9I | GGNCC | 4 cut(s) | 82, 304, 1739, 1922 |
| AsuII | TTCGAA | 1 cut(s) | 1142 |
| AsuNHI | GCTAGC | 1 cut(s) | 238 |
| AvaI | CYCGRG | 1 cut(s) | 584 |
| AvaII | GGWCC | 3 cut(s) | 82, 1739, 1922 |
| AxyI | CCTNAGG | 1 cut(s) | 2232 |
| BaeGI | GKGCMC | 2 cut(s) | 1612, 2814 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2581, 2614 |
| BamHI | GGATCC | 1 cut(s) | 802 |
| BanII | GRGCYC | 2 cut(s) | 1431, 2359 |
| BbsI | GAAGAC | 1 cut(s) | 2109 |
| Bbv12I | GWGCWC | 4 cut(s) | 1171, 1431, 2359, 2760 |
| BbvCI | CCTCAGC | 3 cut(s) | 447, 537, 2268 |
| BccI | CCATC | 8 cut(s) | 640, 980, 1184, 1193, 1465, 2239, 2297, 2783 |
| BceAI | ACGGC | 1 cut(s) | 1723 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 502, 536, 2740, 2774 |
| BciT130I | CCWGG | 1 cut(s) | 629 |
| BclI | TGATCA | 2 cut(s) | 559, 1453 |
| BcoDI | GTCTC | 5 cut(s) | 991, 1799, 1999, 2147, 2835 |
| BfaI | CTAG | 9 cut(s) | 239, 245, 308, 476, 1326, 1376, 1433, 1548, 1613 |
| BfmI | CTRYAG | 3 cut(s) | 917, 1055, 1712 |
| BfoI | RGCGCY | 1 cut(s) | 341 |
| BfuAI | ACCTGC | 3 cut(s) | 1062, 1786, 1849 |
| Bme1390I | CCNGG | 1 cut(s) | 629 |
| Bme18I | GGWCC | 3 cut(s) | 82, 1739, 1922 |
| BmeT110I | CYCGRG | 1 cut(s) | 584 |
| BmgBI | CACGTC | 1 cut(s) | 1271 |
| BmgT120I | GGNCC | 4 cut(s) | 82, 304, 1739, 1922 |
| BmiI | GGNNCC | 3 cut(s) | 756, 804, 2649 |
| BmrFI | CCNGG | 1 cut(s) | 629 |
| BmrI | ACTGGG | 1 cut(s) | 2808 |
| BmsI | GCATC | 4 cut(s) | 412, 2254, 2305, 2695 |
| BmtI | GCTAGC | 1 cut(s) | 242 |
| BmuI | ACTGGG | 1 cut(s) | 2808 |
| BpiI | GAAGAC | 1 cut(s) | 2109 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 119, 151 |
| BpmI | CTGGAG | 1 cut(s) | 989 |
| Bpu10I | CCTNAGC | 4 cut(s) | 447, 537, 2162, 2268 |
| Bpu14I | TTCGAA | 1 cut(s) | 1142 |
| BpuEI | CTTGAG | 3 cut(s) | 689, 2539, 2819 |
| BsaHI | GRCGYC | 1 cut(s) | 359 |
| BsaI | GGTCTC | 1 cut(s) | 2147 |
| BsaJI | CCNNGG | 4 cut(s) | 900, 2593, 2731, 2955 |
| BsaWI | WCCGGW | 1 cut(s) | 377 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 987, 1017 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 1093, 1706, 2029, 2163, 2576 |
| Bse118I | RCCGGY | 1 cut(s) | 2569 |
| Bse1I | ACTGG | 3 cut(s) | 1006, 1314, 2814 |
| Bse21I | CCTNAGG | 1 cut(s) | 2232 |
| Bse3DI | GCAATG | 4 cut(s) | 1295, 1968, 2217, 2717 |
| BseBI | CCWGG | 1 cut(s) | 629 |
| BseDI | CCNNGG | 4 cut(s) | 900, 2593, 2731, 2955 |
| BseGI | GGATG | 5 cut(s) | 373, 374, 427, 613, 1410 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 1093, 1706, 2029, 2163, 2576 |
| BseMI | GCAATG | 4 cut(s) | 1295, 1968, 2217, 2717 |
| BseMII | CTCAG | 8 cut(s) | 417, 438, 528, 1794, 2255, 2259, 2789, 2933 |
| BseNI | ACTGG | 3 cut(s) | 1006, 1314, 2814 |
| BsePI | GCGCGC | 1 cut(s) | 2539 |
| BseRI | GAGGAG | 2 cut(s) | 808, 2207 |
| BseSI | GKGCMC | 2 cut(s) | 1612, 2814 |
| BsgI | GTGCAG | 6 cut(s) | 1317, 1752, 1833, 2456, 2550, 2571 |
| Bsh1236I | CGCG | 5 cut(s) | 512, 1338, 1791, 2541, 2543 |
| BshFI | GGCC | 4 cut(s) | 134, 305, 1710, 2636 |
| BsiHKAI | GWGCWC | 4 cut(s) | 1171, 1431, 2359, 2760 |
| BsiHKCI | CYCGRG | 1 cut(s) | 584 |
| BsiSI | CCGG | 3 cut(s) | 289, 378, 2570 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 1093, 1706, 2029, 2163, 2576 |
| BsmAI | GTCTC | 5 cut(s) | 991, 1799, 1999, 2147, 2835 |
| BsmBI | CGTCTC | 1 cut(s) | 991 |
| BsmI | GAATGC | 1 cut(s) | 499 |
| BsnI | GGCC | 4 cut(s) | 134, 305, 1710, 2636 |
| Bso31I | GGTCTC | 1 cut(s) | 2147 |
| BsoBI | CYCGRG | 1 cut(s) | 584 |
| Bsp119I | TTCGAA | 1 cut(s) | 1142 |
| Bsp1286I | GDGCHC | 6 cut(s) | 1171, 1431, 1612, 2359, 2760, 2814 |
| Bsp1407I | TGTACA | 2 cut(s) | 64, 2603 |
| BspACI | CCGC | 5 cut(s) | 437, 1742, 2332, 2478, 2543 |
| BspANI | GGCC | 4 cut(s) | 134, 305, 1710, 2636 |
| BspCNI | CTCAG | 8 cut(s) | 418, 439, 529, 1795, 2254, 2260, 2790, 2932 |
| BspFNI | CGCG | 5 cut(s) | 512, 1338, 1791, 2541, 2543 |
| BspHI | TCATGA | 1 cut(s) | 787 |
| BspLI | GGNNCC | 3 cut(s) | 756, 804, 2649 |
| BspMAI | CTGCAG | 2 cut(s) | 1059, 1716 |
| BspMI | ACCTGC | 3 cut(s) | 1062, 1786, 1849 |
| BspOI | GCTAGC | 1 cut(s) | 242 |
| BspPI | GGATC | 6 cut(s) | 494, 557, 797, 810, 1180, 2222 |
| BspQI | GCTCTTC | 2 cut(s) | 1011, 1683 |
| BspT104I | TTCGAA | 1 cut(s) | 1142 |
| BspTNI | GGTCTC | 1 cut(s) | 2147 |
| BsrBI | CCGCTC | 1 cut(s) | 437 |
| BsrDI | GCAATG | 4 cut(s) | 1295, 1968, 2217, 2717 |
| BsrFI | RCCGGY | 1 cut(s) | 2569 |
| BsrGI | TGTACA | 2 cut(s) | 64, 2603 |
| BsrI | ACTGG | 3 cut(s) | 1006, 1314, 2814 |
| BssAI | RCCGGY | 1 cut(s) | 2569 |
| BssECI | CCNNGG | 4 cut(s) | 900, 2593, 2731, 2955 |
| BssHII | GCGCGC | 1 cut(s) | 2539 |
| BssNI | GRCGYC | 1 cut(s) | 359 |
| BssT1I | CCWWGG | 4 cut(s) | 900, 2593, 2731, 2955 |
| Bst2UI | CCWGG | 1 cut(s) | 629 |
| Bst4CI | ACNGT | 8 cut(s) | 64, 881, 1088, 1590, 2062, 2108, 2374, 2608 |
| Bst6I | CTCTTC | 5 cut(s) | 142, 447, 765, 1011, 1683 |
| BstACI | GRCGYC | 1 cut(s) | 359 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 405, 1033 |
| BstAUI | TGTACA | 2 cut(s) | 64, 2603 |
| BstBI | TTCGAA | 1 cut(s) | 1142 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2161 |
| BstF5I | GGATG | 5 cut(s) | 373, 374, 427, 613, 1410 |
| BstFNI | CGCG | 5 cut(s) | 512, 1338, 1791, 2541, 2543 |
| BstH2I | RGCGCY | 1 cut(s) | 341 |
| BstHHI | GCGC | 6 cut(s) | 340, 512, 1791, 2251, 2541, 2543 |
| BstMAI | GTCTC | 5 cut(s) | 991, 1799, 1999, 2147, 2835 |
| BstNI | CCWGG | 1 cut(s) | 629 |
| BstNSI | RCATGY | 2 cut(s) | 71, 2135 |
| BstSCI | CCNGG | 1 cut(s) | 627 |
| BstSFI | CTRYAG | 3 cut(s) | 917, 1055, 1712 |
| BstSLI | GKGCMC | 2 cut(s) | 1612, 2814 |
| BstUI | CGCG | 5 cut(s) | 512, 1338, 1791, 2541, 2543 |
| BstV2I | GAAGAC | 1 cut(s) | 2109 |
| BstX2I | RGATCY | 2 cut(s) | 549, 802 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2644 |
| BstYI | RGATCY | 2 cut(s) | 549, 802 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2232 |
| BsuRI | GGCC | 4 cut(s) | 134, 305, 1710, 2636 |
| BtgZI | GCGATG | 1 cut(s) | 2761 |
| BtrI | CACGTC | 1 cut(s) | 1271 |
| BtsCI | GGATG | 5 cut(s) | 373, 374, 427, 613, 1410 |
| BtsI | GCAGTG | 2 cut(s) | 1399, 2258 |
| BtsIMutI | CAGTG | 4 cut(s) | 28, 1399, 2258, 2613 |
| BveI | ACCTGC | 3 cut(s) | 1062, 1786, 1849 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1925 |
| CciI | TCATGA | 1 cut(s) | 787 |
| CfoI | GCGC | 6 cut(s) | 340, 512, 1791, 2251, 2541, 2543 |
| Cfr10I | RCCGGY | 1 cut(s) | 2569 |
| Cfr13I | GGNCC | 4 cut(s) | 82, 304, 1739, 1922 |
| CseI | GACGC | 2 cut(s) | 348, 2246 |
| Csp6I | GTAC | 4 cut(s) | 65, 121, 1313, 2604 |
| CviAII | CATG | 8 cut(s) | 68, 788, 796, 1069, 1841, 1958, 2132, 2744 |
| CviQI | GTAC | 4 cut(s) | 65, 121, 1313, 2604 |
| DraI | TTTAAA | 1 cut(s) | 1492 |
| Eam1104I | CTCTTC | 5 cut(s) | 142, 447, 765, 1011, 1683 |
| EarI | CTCTTC | 5 cut(s) | 142, 447, 765, 1011, 1683 |
| Ecl136II | GAGCTC | 2 cut(s) | 1429, 2357 |
| Eco130I | CCWWGG | 4 cut(s) | 900, 2593, 2731, 2955 |
| Eco24I | GRGCYC | 2 cut(s) | 1431, 2359 |
| Eco31I | GGTCTC | 1 cut(s) | 2147 |
| Eco32I | GATATC | 1 cut(s) | 793 |
| Eco47I | GGWCC | 3 cut(s) | 82, 1739, 1922 |
| Eco47III | AGCGCT | 1 cut(s) | 339 |
| Eco53kI | GAGCTC | 2 cut(s) | 1429, 2357 |
| Eco57I | CTGAAG | 6 cut(s) | 746, 894, 1500, 1899, 2430, 2874 |
| Eco81I | CCTNAGG | 1 cut(s) | 2232 |
| Eco88I | CYCGRG | 1 cut(s) | 584 |
| EcoICRI | GAGCTC | 2 cut(s) | 1429, 2357 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2161 |
| EcoO109I | RGGNCCY | 3 cut(s) | 82, 304, 1922 |
| EcoRII | CCWGG | 1 cut(s) | 627 |
| EcoRV | GATATC | 1 cut(s) | 793 |
| EcoT14I | CCWWGG | 4 cut(s) | 900, 2593, 2731, 2955 |
| EcoT38I | GRGCYC | 2 cut(s) | 1431, 2359 |
| ErhI | CCWWGG | 4 cut(s) | 900, 2593, 2731, 2955 |
| Esp3I | CGTCTC | 1 cut(s) | 991 |
| FaeI | CATG | 8 cut(s) | 71, 791, 799, 1072, 1844, 1961, 2135, 2747 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1020, 1052 |
| FatI | CATG | 8 cut(s) | 67, 787, 795, 1068, 1840, 1957, 2131, 2743 |
| FauI | CCCGC | 1 cut(s) | 2325 |
| FauNDI | CATATG | 1 cut(s) | 2898 |
| FbaI | TGATCA | 2 cut(s) | 559, 1453 |
| FokI | GGATG | 5 cut(s) | 361, 380, 434, 620, 1397 |
| FriOI | GRGCYC | 2 cut(s) | 1431, 2359 |
| FspBI | CTAG | 9 cut(s) | 239, 245, 308, 476, 1326, 1376, 1433, 1548, 1613 |
| GlaI | GCGC | 6 cut(s) | 339, 511, 1790, 2250, 2540, 2542 |
| GsuI | CTGGAG | 1 cut(s) | 989 |
| HaeII | RGCGCY | 1 cut(s) | 341 |
| HaeIII | GGCC | 4 cut(s) | 134, 305, 1710, 2636 |
| HapII | CCGG | 3 cut(s) | 289, 378, 2570 |
| HgaI | GACGC | 2 cut(s) | 348, 2246 |
| HhaI | GCGC | 6 cut(s) | 340, 512, 1791, 2251, 2541, 2543 |
| Hin1I | GRCGYC | 1 cut(s) | 359 |
| Hin1II | CATG | 8 cut(s) | 71, 791, 799, 1072, 1844, 1961, 2135, 2747 |
| Hin6I | GCGC | 6 cut(s) | 338, 510, 1789, 2249, 2539, 2541 |
| HinP1I | GCGC | 6 cut(s) | 338, 510, 1789, 2249, 2539, 2541 |
| HindIII | AAGCTT | 3 cut(s) | 184, 1505, 2694 |
| HinfI | GANTC | 8 cut(s) | 205, 211, 784, 1221, 1247, 2080, 2612, 2872 |
| HpaII | CCGG | 3 cut(s) | 289, 378, 2570 |
| Hpy166II | GTNNAC | 4 cut(s) | 1258, 1423, 2804, 2863 |
| Hpy8I | GTNNAC | 4 cut(s) | 1258, 1423, 2804, 2863 |
| Hpy99I | CGWCG | 2 cut(s) | 364, 1275 |
| HpyAV | CCTTC | 7 cut(s) | 667, 703, 860, 952, 1721, 1963, 2322 |
| HpyCH4III | ACNGT | 8 cut(s) | 64, 881, 1088, 1590, 2062, 2108, 2374, 2608 |
| HpyCH4IV | ACGT | 3 cut(s) | 598, 830, 1270 |
| HpySE526I | ACGT | 3 cut(s) | 598, 830, 1270 |
| Hsp92I | GRCGYC | 1 cut(s) | 359 |
| Hsp92II | CATG | 8 cut(s) | 71, 791, 799, 1072, 1844, 1961, 2135, 2747 |
| HspAI | GCGC | 6 cut(s) | 338, 510, 1789, 2249, 2539, 2541 |
| Ksp22I | TGATCA | 2 cut(s) | 559, 1453 |
| LguI | GCTCTTC | 2 cut(s) | 1011, 1683 |
| LmnI | GCTCC | 9 cut(s) | 127, 1024, 1434, 1855, 2128, 2354, 2513, 2684, 2785 |
| LweI | GCATC | 4 cut(s) | 412, 2254, 2305, 2695 |
| MaeI | CTAG | 9 cut(s) | 239, 245, 308, 476, 1326, 1376, 1433, 1548, 1613 |
| MaeII | ACGT | 3 cut(s) | 598, 830, 1270 |
| MaeIII | GTNAC | 8 cut(s) | 698, 824, 869, 886, 1096, 1305, 1378, 2335 |
| MbiI | CCGCTC | 1 cut(s) | 437 |
| MfeI | CAATTG | 6 cut(s) | 283, 945, 1101, 2208, 2290, 2969 |
| MflI | RGATCY | 2 cut(s) | 549, 802 |
| MhlI | GDGCHC | 6 cut(s) | 1171, 1431, 1612, 2359, 2760, 2814 |
| MlyI | GAGTC | 1 cut(s) | 793 |
| MmeI | TCCRAC | 4 cut(s) | 345, 1539, 1716, 2332 |
| MroXI | GAANNNNTTC | 3 cut(s) | 759, 1035, 2084 |
| MseI | TTAA | 7 cut(s) | 278, 1343, 1388, 1491, 1533, 1916, 2490 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1067, 1229 |
| MspA1I | CMGCKG | 1 cut(s) | 1736 |
| MspI | CCGG | 3 cut(s) | 289, 378, 2570 |
| MspR9I | CCNGG | 1 cut(s) | 629 |
| MunI | CAATTG | 6 cut(s) | 283, 945, 1101, 2208, 2290, 2969 |
| Mva1269I | GAATGC | 1 cut(s) | 499 |
| MvaI | CCWGG | 1 cut(s) | 629 |
| MvnI | CGCG | 5 cut(s) | 512, 1338, 1791, 2541, 2543 |
| NdeI | CATATG | 1 cut(s) | 2898 |
| NheI | GCTAGC | 1 cut(s) | 238 |
| NlaIII | CATG | 8 cut(s) | 71, 791, 799, 1072, 1844, 1961, 2135, 2747 |
| NlaIV | GGNNCC | 3 cut(s) | 756, 804, 2649 |
| NmuCI | GTSAC | 5 cut(s) | 698, 824, 886, 1096, 2335 |
| NspI | RCATGY | 2 cut(s) | 71, 2135 |
| NspV | TTCGAA | 1 cut(s) | 1142 |
| PagI | TCATGA | 1 cut(s) | 787 |
| PauI | GCGCGC | 1 cut(s) | 2539 |
| PciI | ACATGT | 1 cut(s) | 67 |
| PciSI | GCTCTTC | 2 cut(s) | 1011, 1683 |
| PctI | GAATGC | 1 cut(s) | 499 |
| PdmI | GAANNNNTTC | 3 cut(s) | 759, 1035, 2084 |
| PfeI | GAWTC | 7 cut(s) | 205, 211, 1221, 1247, 2080, 2612, 2872 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2029 |
| PleI | GAGTC | 1 cut(s) | 792 |
| PpsI | GAGTC | 1 cut(s) | 792 |
| PpuMI | RGGWCCY | 2 cut(s) | 82, 1922 |
| PscI | ACATGT | 1 cut(s) | 67 |
| PsiI | TTATAA | 2 cut(s) | 2171, 2789 |
| Psp124BI | GAGCTC | 2 cut(s) | 1431, 2359 |
| Psp5II | RGGWCCY | 2 cut(s) | 82, 1922 |
| Psp6I | CCWGG | 1 cut(s) | 627 |
| PspGI | CCWGG | 1 cut(s) | 627 |
| PspN4I | GGNNCC | 3 cut(s) | 756, 804, 2649 |
| PspPI | GGNCC | 4 cut(s) | 82, 304, 1739, 1922 |
| PspPPI | RGGWCCY | 2 cut(s) | 82, 1922 |
| PstI | CTGCAG | 2 cut(s) | 1059, 1716 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1925 |
| PsuI | RGATCY | 2 cut(s) | 549, 802 |
| PteI | GCGCGC | 1 cut(s) | 2539 |
| PvuII | CAGCTG | 1 cut(s) | 1736 |
| RsaI | GTAC | 4 cut(s) | 66, 122, 1314, 2605 |
| RsaNI | GTAC | 4 cut(s) | 65, 121, 1313, 2604 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1067, 1229 |
| SacI | GAGCTC | 2 cut(s) | 1431, 2359 |
| SapI | GCTCTTC | 2 cut(s) | 1011, 1683 |
| SaqAI | TTAA | 7 cut(s) | 278, 1343, 1388, 1491, 1533, 1916, 2490 |
| Sau96I | GGNCC | 4 cut(s) | 82, 304, 1739, 1922 |
| SchI | GAGTC | 1 cut(s) | 793 |
| ScrFI | CCNGG | 1 cut(s) | 629 |
| SduI | GDGCHC | 6 cut(s) | 1171, 1431, 1612, 2359, 2760, 2814 |
| SfaNI | GCATC | 4 cut(s) | 412, 2254, 2305, 2695 |
| SfcI | CTRYAG | 3 cut(s) | 917, 1055, 1712 |
| SfuI | TTCGAA | 1 cut(s) | 1142 |
| SinI | GGWCC | 3 cut(s) | 82, 1739, 1922 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1067, 1229 |
| SmlI | CTYRAG | 3 cut(s) | 668, 2518, 2834 |
| SmoI | CTYRAG | 3 cut(s) | 668, 2518, 2834 |
| SsiI | CCGC | 5 cut(s) | 437, 1742, 2332, 2478, 2543 |
| SspI | AATATT | 1 cut(s) | 295 |
| SspMI | CTAG | 9 cut(s) | 239, 245, 308, 476, 1326, 1376, 1433, 1548, 1613 |
| SstI | GAGCTC | 2 cut(s) | 1431, 2359 |
| StyD4I | CCNGG | 1 cut(s) | 627 |
| StyI | CCWWGG | 4 cut(s) | 900, 2593, 2731, 2955 |
| TaaI | ACNGT | 8 cut(s) | 64, 881, 1088, 1590, 2062, 2108, 2374, 2608 |
| TaiI | ACGT | 3 cut(s) | 601, 833, 1273 |
| TaqII | GACCGA | 1 cut(s) | 905 |
| TatI | WGTACW | 3 cut(s) | 64, 120, 2603 |
| TauI | GCSGC | 2 cut(s) | 440, 2480 |
| TfiI | GAWTC | 7 cut(s) | 205, 211, 1221, 1247, 2080, 2612, 2872 |
| Tru1I | TTAA | 7 cut(s) | 278, 1343, 1388, 1491, 1533, 1916, 2490 |
| Tru9I | TTAA | 7 cut(s) | 278, 1343, 1388, 1491, 1533, 1916, 2490 |
| TscAI | CASTG | 4 cut(s) | 28, 1399, 2258, 2613 |
| TseFI | GTSAC | 5 cut(s) | 698, 824, 886, 1096, 2335 |
| Tsp45I | GTSAC | 5 cut(s) | 698, 824, 886, 1096, 2335 |
| TspDTI | ATGAA | 8 cut(s) | 363, 594, 1029, 1293, 1857, 2607, 2778, 2954 |
| TspGWI | ACGGA | 1 cut(s) | 492 |
| TspRI | CASTG | 4 cut(s) | 28, 1399, 2258, 2613 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2029 |
| VpaK11BI | GGWCC | 3 cut(s) | 82, 1739, 1922 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2161 |
| XapI | RAATTY | 5 cut(s) | 100, 730, 767, 1661, 2175 |
| XbaI | TCTAGA | 1 cut(s) | 244 |
| XceI | RCATGY | 2 cut(s) | 71, 2135 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1976 |
| XmnI | GAANNNNTTC | 3 cut(s) | 759, 1035, 2084 |
| XspI | CTAG | 9 cut(s) | 239, 245, 308, 476, 1326, 1376, 1433, 1548, 1613 |