Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0001613

Physical Location & Seq

Genomic Coordinates Reverse (-)

22432573 .. 22439317

Gene Structure 6745 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1154800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3030 bp

ATGTTGGCACCAGACTTGGTTTCAAGTGTTGCATCTGCTCCGGCTTCAGAAATAATTTCTCAAACATTAGAGGCCATTTTCGAAATTGCAGCTGCTGCCGGGGACGTCCTTGTTAAGAAGGATACATTTAAAGAGGTTTCAACTTATTTGGAAAGGATAGTCCCCATCTTAAGGGAGTTGAACAAGAAATCTATTCTTCATTCTGAGAGCTTAAACAATGTTATGGTGATTCTTAACCGAGAAATCAGAGCCGCAAAGCAACTGACCCTTGAGTGCAGGAAGAGAAACAAAGTGTATCTCTTAATCCATTGCCGAACAATAGTTAAGCGCCTAGAAGACACTATGAAAGAGATCAGTCGGGCTTTAGGTCTTCTTCCCCTGACTTCTCTAGATATTTCATCTGGCATAGTTGAAGAAATTGAAAAGCTTTGTGATAATATGCAGCGAGCTGAGTTCAGGGCAGCAATAGCAGAAGAAGAGATTTTGAACAAAATCGAGTCTGGAATCCAGGAGAGAAACGTCGATCGTTCTTATGCAAATAATTTGCTGGTTCTTATAGCAGAGGCAATCGGAATCTCAACTGAGAGGTCAGTGTTAAAGAAGGAATTAGAAGACTTCAGGAGTGAGATAGAAAACGCTCGGCTGAGGAAAGACCAGGCTGAAGCTATACAAATGGACCAAATAATTGCTTTATTAGAAAGAGCTGATGCAGCTTCATCTTCTAAGGAGAAAGAAATGAAATATATGATAAAGCGGAAATCTTTGGGGTTTCAACTATTGGAACCGCTTCAGTCATTTTATTGTCCAATCACCAGGGACGTTATGGTGGACCCTGTGGAAACTTCTTCTGGACAGACATTTGAGAAAAGTGCTATAGAAAAGTGGTTTGCCGATGGGAACAAATTGTGCCCCCTGACCATGACTTCTTTGGACACATCAATTTTGCGGCCCAATAAAACTCTTCGGCAATCCATAGAAGAATGGAAGGACAGAAATTCGATGATTACGATTGGTTCCTTGAAATCAAAACTCCAATCTGAAGAAGAAGAAGAAGTGCTTCATTGCCTGGCTGATTTACTAGATCTCTGTAAACAAAGAGAATTGCATAAGGAATGGGTCATACTAGAGAACTACATACCGATTCTCATTCAACTTCTTGGTGTTAAAAATCCCGAGATAAGGAACAATGCTCTTGTCATCCTTTGCATTTTGGTGAAGGATAGTGATGATGCGAAGGAAAGAATCGCCAAAGTTGATAACGGTATTGAATCTATTGTTCGTTCACTTGGGCGCCGTGTTGAGGAAAGGAAGTTAGCAGTTGCATTACTTTTGGAGTTATCAAAATATAATTTGGTAAGAGAATGCATTGGGAAGGTTCAAGGTTGCATACTCCTATTAGTTACCATGTCCAACAGTGACGATAATCGGGCTGCCAGAGACGCACGAGAGCTACTGGAGAATCTGTCATTCTCTAATGAGAATGTTGTACAGATGGCGAAGGCAAACTATTTTAAACATTTGCTGCAGCGTCTCACTACAGGACCGGAAGATGTACAAATGATTATGGCATCAAATTTGGCAGAGATGGAATTGACCGACCACAATAAAGAATCTTTGGTTCAAGGAGGAGTAATGGGTCCACTTCTTTACATGGTCGCACATGGTGACATTCCAATTAAAATGGTGGCTGTTAGAGCTCTTAGAAACCTCTCAAGCTTGCCTAAAAATGGTCTACAGATGATTCGAGAAGGTGCTGAACGCCCATTACTTGACCTTCTTTTCAGTCTTAGTTCGTCATTGTCAAGTTTGCGTGAATACATAGCAGCCACAATTATGCAACTCTCCATTTCAATGGCGTCTCAAGAATCCAACCAGACACCCGTTTCATTTTTGGAATCAGATGAAGATATTATCAAGCTCATCTCTTTGATTAGCTTGATGGGGCCCAATGTAAAGCAAAGCATCATTCGGACCTTCCACGCCTTGTGTCAATCCCCCTCCACTACAAGTATCAAGACCAAGTTGATACAGTCCTCAGCTGTACAAGTATTGGTTCAGTTGTGCGAGCATGATGACCTAAACCTACGAGCAAGTGCTGTAAAGCTGTTCTCTTGCTTAGTAGAAGGCAGCAGTGAAGTCACCACTATCCTGGAGCATGTGAATCAGAAGTGCATTGAGACTATAATCAAGATCATCAAAACTTCTGATGACGAAGAGGAGGTCGCTTATGCAATGGACATTATCTCTAACCTTCCCGAAAACACCGAGATCACACAGTGGCTTATGGATGCTGGGGCACTACATGTCATACTCAGCTTTCTCCAGAATAGCAAGCGGAATGGTCCCCATAGAAATCAGTTGACAGAGAATGCTGTTGGAGCCATTTGTCGGTTCACTGCTCCAACGAACTTGGAATGGCAAAAGAATGCAGCTGGAGCTGGCATTATACCGTTGTTCGTACATTTGCTGGAGTCTGGAACTTCATTGACAAAGGAACGTGCAGCCATATCTCTTTCTCGGTTTTCAAAGAGTTCACCAAGTTTGAGCCAGTCTTTACCTAACCGCAAAGGATTCTGCTGCTTCTCGGCCCCACCAGAAACTGGATGCCCTGTTCATGGAGGAATCTGTGGCATTGTTTCATCATTTTGCCTTGTGGAGGCTGGTGCAGTGGGGCCACTGGTTAGGATTCTTGGGGAACCTGATCCCGGAGCTTGTGAGGCTTCTTTAGATGCACTATTAACTTTAATCGAAGGTGAGAGACTGCAGATGGGTAGTAAGGTGCTTACAGATGCAAATGCCATCCCACCTATAATAAAATTTCTTGTTCACCCAAAAGCTAGTTTGCAAGAGAAGGCCTTAAATGCTCTAGAAAGAATGTTCCGGTTGCTGGAGTTTAAACAGAAGTTTGGAGGCTCAGCTCAGATGCCTTTAGTCGACTTAACTCAGCGTGGAAGCGGTAGTGTGAAATCTATGGCAGCCAGAATACTTGCTCACCTGAACGTGCTTCACGATCAGTCTTCTTATTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm Arm_2 U-box

Protein Analysis

1010

Amino Acids

111.93

Weight (kDa)

5.83

Isoelectric Point (pI)

47.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
U-box	PF04564	266 - 332	7.6e-16	U-box domain
ARM_ARMC5	PF24768	531 - 706	9.5e-09	ARMC5
ARM_ARMC5	PF24768	650 - 800	2.5e-08	ARMC5

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001613)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g32250
malus_domestica	MD01G1085600.v1.1 MD07G1154800.v1.1 MD07G1295700.v1.1
prunus_persica	Prupe.2G193400_v2.0.a1 Prupe.2G315200_v2.0.a1 Prupe.2G315200_v2.0.a1 Prupe.2G315200_v2.0.a1 Prupe.2G315200_v2.0.a1 Prupe.2G315200_v2.0.a1 Prupe.2G315200_v2.0.a1
pyrus_communis	pycom07g15200 pycom07g26840
rosa_chinensis	RchiOBHm_Chr1g0360521 RchiOBHm_Chr1g0381931
rosa_laevigata	RLG00000026199 RLG00000027799
rosa_multiflora	Rmu_sc0010238.1_g000006 Rmu_ssc0000337.1_g000005
rosa_roxburghii	Rroxscaffold_4G00278330 Rroxscaffold_4G00296020
rosa_rugosa	Rorug01G0279400 Rorug01G0279500 Rorug01G0279600 Rorug01G0279700 Rorug01G0432300
rosa_samantha	Rh1AG291700 Rh1AG455500 Rh1BG256700 Rh1BG412700 Rh1CG274400 Rh1CG427500 Rh1DG286500 Rh1DG445000
rosa_wichuraiana	Rw1G025840 Rw1G041360 Rw1G041490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	108
AccB1I	GGYRCC	2 cut(s)	7, 1290
AccB7I	CCANNNNNTGG	1 cut(s)	2600
AccI	GTMKAC	2 cut(s)	1732, 2934
AciI	CCGC	7 cut(s)	252, 754, 785, 946, 2335, 2563, 2955
AclWI	GGATC	1 cut(s)	2696
AcsI	RAATTY	3 cut(s)	994, 1573, 2816
AcuI	CTGAAG	5 cut(s)	30, 601, 681, 773, 1059
AcyI	GRCGYC	3 cut(s)	105, 1291, 1856
AdeI	CACNNNGTG	2 cut(s)	1664, 2277
AfaI	GTAC	4 cut(s)	1488, 1554, 2043, 2460
AflII	CTTAAG	1 cut(s)	169
AflIII	ACRYGT	1 cut(s)	2302
AjnI	CCWGG	5 cut(s)	507, 654, 812, 1065, 2148
AloI	GAACNNNNNNTCC	2 cut(s)	2595, 2627
Alw21I	GWGCWC	1 cut(s)	1699
Alw26I	GTCTC	5 cut(s)	1431, 1535, 1863, 2171, 2752
AlwI	GGATC	1 cut(s)	2696
AlwNI	CAGNNNCTG	2 cut(s)	95, 2600
Ama87I	CYCGRG	1 cut(s)	1172
AoxI	GGCC	6 cut(s)	72, 947, 1943, 2586, 2672, 2853
ApaI	GGGCCC	1 cut(s)	1947
ApoI	RAATTY	3 cut(s)	994, 1573, 2816
ArsI	GACNNNNNNTTYG	2 cut(s)	2205, 2237
Asp700I	GAANNNNTTC	2 cut(s)	786, 1056
AspLEI	GCGC	2 cut(s)	330, 1293
AsuC2I	CCSGG	2 cut(s)	100, 2706
AsuHPI	GGTGA	9 cut(s)	238, 802, 1225, 1676, 2131, 2526, 2765, 2819, 2984
AsuII	TTCGAA	1 cut(s)	81
AvaI	CYCGRG	1 cut(s)	1172
AvaII	GGWCC	6 cut(s)	676, 829, 1541, 1637, 1971, 2342
BaeGI	GKGCMC	3 cut(s)	911, 1947, 2299
BanI	GGYRCC	2 cut(s)	7, 1290
BanII	GRGCYC	2 cut(s)	1699, 1947
BauI	CACGAG	1 cut(s)	1443
BbsI	GAAGAC	4 cut(s)	342, 362, 618, 3009
Bbv12I	GWGCWC	1 cut(s)	1699
BbvCI	CCTCAGC	2 cut(s)	644, 2035
BccI	CCATC	7 cut(s)	173, 887, 1486, 1579, 1933, 2761, 2807
BceAI	ACGGC	1 cut(s)	1278
BciT130I	CCWGG	5 cut(s)	509, 656, 814, 1067, 2150
BciVI	GTATCC	1 cut(s)	115
BcnI	CCSGG	2 cut(s)	100, 2706
BcoDI	GTCTC	5 cut(s)	1431, 1535, 1863, 2171, 2752
BfaI	CTAG	6 cut(s)	332, 389, 1079, 1124, 2838, 2867
BfmI	CTRYAG	5 cut(s)	873, 1523, 1536, 1733, 2762
BfoI	RGCGCY	2 cut(s)	331, 1294
BfrI	CTTAAG	1 cut(s)	169
BfuI	GTATCC	1 cut(s)	115
BglII	AGATCT	1 cut(s)	1081
BlpI	GCTNAGC	1 cut(s)	2914
Bme1390I	CCNGG	7 cut(s)	100, 509, 656, 814, 1067, 2150, 2706
Bme18I	GGWCC	6 cut(s)	676, 829, 1541, 1637, 1971, 2342
BmeT110I	CYCGRG	1 cut(s)	1172
BmrFI	CCNGG	7 cut(s)	100, 509, 656, 814, 1067, 2150, 2706
BpiI	GAAGAC	4 cut(s)	342, 362, 618, 3009
BpmI	CTGGAG	6 cut(s)	1475, 2171, 2306, 2454, 2489, 2909
Bpu10I	CCTNAGC	2 cut(s)	644, 2035
Bpu1102I	GCTNAGC	1 cut(s)	2914
Bpu14I	TTCGAA	1 cut(s)	81
BpuEI	CTTGAG	3 cut(s)	290, 1696, 1845
BpuMI	CCSGG	2 cut(s)	100, 2706
BsaHI	GRCGYC	3 cut(s)	105, 1291, 1856
BsaJI	CCNNGG	2 cut(s)	99, 813
BsaWI	WCCGGW	2 cut(s)	1543, 2880
BsaXI	ACNNNNNCTCC	2 cut(s)	1448, 1478
Bse1I	ACTGG	4 cut(s)	1458, 2548, 2605, 2682
Bse3DI	GCAATG	3 cut(s)	307, 1060, 2238
BseBI	CCWGG	5 cut(s)	509, 656, 814, 1067, 2150
BseDI	CCNNGG	2 cut(s)	99, 813
BseGI	GGATG	4 cut(s)	1197, 2293, 2609, 2799
BseMI	GCAATG	3 cut(s)	307, 1060, 2238
BseMII	CTCAG	9 cut(s)	195, 441, 573, 635, 2049, 2326, 2928, 2933, 2957
BseNI	ACTGG	4 cut(s)	1458, 2548, 2605, 2682
BseRI	GAGGAG	2 cut(s)	1641, 2231
BseSI	GKGCMC	3 cut(s)	911, 1947, 2299
BseYI	CCCAGC	1 cut(s)	2291
BsgI	GTGCAG	3 cut(s)	295, 2520, 2685
Bsh1285I	CGRYCG	1 cut(s)	526
BshFI	GGCC	6 cut(s)	74, 949, 1945, 2588, 2674, 2855
BshNI	GGYRCC	2 cut(s)	7, 1290
BsiEI	CGRYCG	1 cut(s)	526
BsiHKAI	GWGCWC	1 cut(s)	1699
BsiHKCI	CYCGRG	1 cut(s)	1172
BsiSI	CCGG	5 cut(s)	41, 99, 1544, 2706, 2881
BslFI	GGGAC	4 cut(s)	116, 146, 830, 2328
BsmAI	GTCTC	5 cut(s)	1431, 1535, 1863, 2171, 2752
BsmBI	CGTCTC	3 cut(s)	1431, 1535, 1863
BsmFI	GGGAC	4 cut(s)	116, 146, 830, 2328
BsmI	GAATGC	3 cut(s)	1367, 2374, 2431
BsnI	GGCC	6 cut(s)	74, 949, 1945, 2588, 2674, 2855
BsoBI	CYCGRG	1 cut(s)	1172
Bsp119I	TTCGAA	1 cut(s)	81
Bsp120I	GGGCCC	1 cut(s)	1943
Bsp1286I	GDGCHC	4 cut(s)	911, 1699, 1947, 2299
Bsp1407I	TGTACA	3 cut(s)	1486, 1552, 2041
Bsp143I	GATC	7 cut(s)	351, 523, 1081, 2190, 2268, 2701, 3010
Bsp1720I	GCTNAGC	1 cut(s)	2914
BspACI	CCGC	7 cut(s)	252, 754, 785, 946, 2335, 2563, 2955
BspANI	GGCC	6 cut(s)	74, 949, 1945, 2588, 2674, 2855
BspCNI	CTCAG	9 cut(s)	196, 442, 574, 636, 2048, 2325, 2927, 2932, 2956
BspMAI	CTGCAG	2 cut(s)	1527, 2766
BspPI	GGATC	1 cut(s)	2696
BspT104I	TTCGAA	1 cut(s)	81
BspT107I	GGYRCC	2 cut(s)	7, 1290
BspTI	CTTAAG	1 cut(s)	169
BsrDI	GCAATG	3 cut(s)	307, 1060, 2238
BsrGI	TGTACA	3 cut(s)	1486, 1552, 2041
BsrI	ACTGG	4 cut(s)	1458, 2548, 2605, 2682
BssECI	CCNNGG	2 cut(s)	99, 813
BssMI	GATC	7 cut(s)	351, 523, 1081, 2190, 2268, 2701, 3010
BssNI	GRCGYC	3 cut(s)	105, 1291, 1856
BssSI	CACGAG	1 cut(s)	1443
Bst2BI	CACGAG	1 cut(s)	1443
Bst2UI	CCWGG	5 cut(s)	509, 656, 814, 1067, 2150
Bst4CI	ACNGT	5 cut(s)	1262, 1415, 2031, 2277, 2451
Bst6I	CTCTTC	4 cut(s)	275, 471, 966, 2208
BstACI	GRCGYC	3 cut(s)	105, 1291, 1856
BstAFI	CTTAAG	1 cut(s)	169
BstAPI	GCANNNNNTGC	1 cut(s)	95
BstAUI	TGTACA	3 cut(s)	1486, 1552, 2041
BstBI	TTCGAA	1 cut(s)	81
BstC8I	GCNNGC	5 cut(s)	447, 1718, 2066, 2333, 2440
BstENI	CCTNNNNNAGG	1 cut(s)	2654
BstF5I	GGATG	4 cut(s)	1197, 2293, 2609, 2799
BstH2I	RGCGCY	2 cut(s)	331, 1294
BstHHI	GCGC	2 cut(s)	330, 1293
BstKTI	GATC	7 cut(s)	354, 526, 1084, 2193, 2271, 2704, 3013
BstMAI	GTCTC	5 cut(s)	1431, 1535, 1863, 2171, 2752
BstMBI	GATC	7 cut(s)	351, 523, 1081, 2190, 2268, 2701, 3010
BstMCI	CGRYCG	1 cut(s)	526
BstMWI	GCNNNNNNNGC	9 cut(s)	95, 467, 710, 1439, 1694, 2378, 2435, 2717, 2861
BstNI	CCWGG	5 cut(s)	509, 656, 814, 1067, 2150
BstNSI	RCATGY	2 cut(s)	2159, 2306
BstSCI	CCNGG	7 cut(s)	98, 507, 654, 812, 1065, 2148, 2704
BstSFI	CTRYAG	5 cut(s)	873, 1523, 1536, 1733, 2762
BstSLI	GKGCMC	3 cut(s)	911, 1947, 2299
BstV2I	GAAGAC	4 cut(s)	342, 362, 618, 3009
BstX2I	RGATCY	1 cut(s)	1081
BstXI	CCANNNNNNTGG	2 cut(s)	1852, 2149
BstYI	RGATCY	1 cut(s)	1081
BsuI	GTATCC	1 cut(s)	115
BsuRI	GGCC	6 cut(s)	74, 949, 1945, 2588, 2674, 2855
BtsCI	GGATG	4 cut(s)	1197, 2293, 2609, 2799
BtsI	GCAGTG	3 cut(s)	2137, 2394, 2673
BtsIMutI	CAGTG	7 cut(s)	597, 1420, 2137, 2282, 2394, 2673, 2675
Cac8I	GCNNGC	5 cut(s)	447, 1718, 2066, 2333, 2440
CaiI	CAGNNNCTG	2 cut(s)	95, 2600
CfoI	GCGC	2 cut(s)	330, 1293
CseI	GACGC	3 cut(s)	1448, 1517, 1845
Csp6I	GTAC	4 cut(s)	1487, 1553, 2042, 2459
CviAII	CATG	8 cut(s)	919, 1405, 1651, 1661, 2069, 2156, 2303, 2615
CviQI	GTAC	4 cut(s)	1487, 1553, 2042, 2459
DinI	GGCGCC	1 cut(s)	1292
DpnI	GATC	7 cut(s)	353, 525, 1083, 2192, 2270, 2703, 3012
DpnII	GATC	7 cut(s)	351, 523, 1081, 2190, 2268, 2701, 3010
DraI	TTTAAA	3 cut(s)	130, 1513, 2896
DraIII	CACNNNGTG	2 cut(s)	1664, 2277
Eam1104I	CTCTTC	4 cut(s)	275, 471, 966, 2208
EarI	CTCTTC	4 cut(s)	275, 471, 966, 2208
Ecl136II	GAGCTC	1 cut(s)	1697
Eco147I	AGGCCT	1 cut(s)	2855
Eco24I	GRGCYC	2 cut(s)	1699, 1947
Eco47I	GGWCC	6 cut(s)	676, 829, 1541, 1637, 1971, 2342
Eco53kI	GAGCTC	1 cut(s)	1697
Eco57I	CTGAAG	5 cut(s)	30, 601, 681, 773, 1059
Eco88I	CYCGRG	1 cut(s)	1172
EcoICRI	GAGCTC	1 cut(s)	1697
EcoNI	CCTNNNNNAGG	1 cut(s)	2654
EcoO109I	RGGNCCY	1 cut(s)	1943
EcoRII	CCWGG	5 cut(s)	507, 654, 812, 1065, 2148
EcoT22I	ATGCAT	1 cut(s)	1367
EcoT38I	GRGCYC	2 cut(s)	1699, 1947
EgeI	GGCGCC	1 cut(s)	1292
EheI	GGCGCC	1 cut(s)	1292
Esp3I	CGTCTC	3 cut(s)	1431, 1535, 1863
FaeI	CATG	8 cut(s)	922, 1408, 1654, 1664, 2072, 2159, 2306, 2618
FalI	AAGNNNNNCTT	2 cut(s)	1041, 1073
FaqI	GGGAC	4 cut(s)	116, 146, 830, 2328
FatI	CATG	8 cut(s)	918, 1404, 1650, 1660, 2068, 2155, 2302, 2614
FblI	GTMKAC	2 cut(s)	1732, 2934
FokI	GGATG	4 cut(s)	1184, 2300, 2616, 2786
FriOI	GRGCYC	2 cut(s)	1699, 1947
FspBI	CTAG	6 cut(s)	332, 389, 1079, 1124, 2838, 2867
GlaI	GCGC	2 cut(s)	329, 1292
GsaI	CCCAGC	1 cut(s)	2295
GsuI	CTGGAG	6 cut(s)	1475, 2171, 2306, 2454, 2489, 2909
HaeII	RGCGCY	2 cut(s)	331, 1294
HaeIII	GGCC	6 cut(s)	74, 949, 1945, 2588, 2674, 2855
HapII	CCGG	5 cut(s)	41, 99, 1544, 2706, 2881
HgaI	GACGC	3 cut(s)	1448, 1517, 1845
HhaI	GCGC	2 cut(s)	330, 1293
Hin1I	GRCGYC	3 cut(s)	105, 1291, 1856
Hin1II	CATG	8 cut(s)	922, 1408, 1654, 1664, 2072, 2159, 2306, 2618
Hin6I	GCGC	2 cut(s)	328, 1291
HinP1I	GCGC	2 cut(s)	328, 1291
HincII	GTYRAC	2 cut(s)	2361, 2935
HindII	GTYRAC	2 cut(s)	2361, 2935
HindIII	AAGCTT	2 cut(s)	425, 1714
HpaII	CCGG	5 cut(s)	41, 99, 1544, 2706, 2881
HphI	GGTGA	9 cut(s)	238, 802, 1225, 1676, 2131, 2526, 2765, 2819, 2984
Hpy99I	CGWCG	1 cut(s)	524
HpyCH4III	ACNGT	5 cut(s)	1262, 1415, 2031, 2277, 2451
HpyCH4IV	ACGT	5 cut(s)	105, 519, 819, 2497, 3000
HpyF10VI	GCNNNNNNNGC	9 cut(s)	95, 467, 710, 1439, 1694, 2378, 2435, 2717, 2861
HpySE526I	ACGT	5 cut(s)	105, 519, 819, 2497, 3000
Hsp92I	GRCGYC	3 cut(s)	105, 1291, 1856
Hsp92II	CATG	8 cut(s)	922, 1408, 1654, 1664, 2072, 2159, 2306, 2618
HspAI	GCGC	2 cut(s)	328, 1291
KasI	GGCGCC	1 cut(s)	1290
Kzo9I	GATC	7 cut(s)	351, 523, 1081, 2190, 2268, 2701, 3010
LmnI	GCTCC	6 cut(s)	43, 2152, 2378, 2404, 2435, 2708
MaeI	CTAG	6 cut(s)	332, 389, 1079, 1124, 2838, 2867
MaeII	ACGT	5 cut(s)	105, 519, 819, 2497, 3000
MaeIII	GTNAC	4 cut(s)	1399, 1415, 1664, 2137
MalI	GATC	7 cut(s)	353, 525, 1083, 2192, 2270, 2703, 3012
MboI	GATC	7 cut(s)	351, 523, 1081, 2190, 2268, 2701, 3010
MflI	RGATCY	1 cut(s)	1081
MhlI	GDGCHC	4 cut(s)	911, 1699, 1947, 2299
Mly113I	GGCGCC	1 cut(s)	1291
MlyI	GAGTC	2 cut(s)	506, 2480
MmeI	TCCRAC	4 cut(s)	1434, 1893, 2356, 2426
Mph1103I	ATGCAT	1 cut(s)	1367
MroXI	GAANNNNTTC	2 cut(s)	786, 1056
MslI	CAYNNNNRTG	3 cut(s)	1211, 1832, 1850
MspA1I	CMGCKG	3 cut(s)	92, 2039, 2432
MspCI	CTTAAG	1 cut(s)	169
MspI	CCGG	5 cut(s)	41, 99, 1544, 2706, 2881
MspR9I	CCNGG	7 cut(s)	100, 509, 656, 814, 1067, 2150, 2706
MssI	GTTTAAAC	1 cut(s)	2896
Mva1269I	GAATGC	3 cut(s)	1367, 2374, 2431
MvaI	CCWGG	5 cut(s)	509, 656, 814, 1067, 2150
MwoI	GCNNNNNNNGC	9 cut(s)	95, 467, 710, 1439, 1694, 2378, 2435, 2717, 2861
NarI	GGCGCC	1 cut(s)	1291
NciI	CCSGG	2 cut(s)	100, 2706
NdeII	GATC	7 cut(s)	351, 523, 1081, 2190, 2268, 2701, 3010
NlaIII	CATG	8 cut(s)	922, 1408, 1654, 1664, 2072, 2159, 2306, 2618
NmeAIII	GCCGAG	2 cut(s)	619, 2564
NmuCI	GTSAC	3 cut(s)	1415, 1664, 2137
NsiI	ATGCAT	1 cut(s)	1367
NspI	RCATGY	2 cut(s)	2159, 2306
NspV	TTCGAA	1 cut(s)	81
PceI	AGGCCT	1 cut(s)	2855
PciI	ACATGT	1 cut(s)	2302
PcsI	WCGNNNNNNNCGW	2 cut(s)	1004, 3006
PctI	GAATGC	3 cut(s)	1367, 2374, 2431
PdmI	GAANNNNTTC	2 cut(s)	786, 1056
PflMI	CCANNNNNTGG	1 cut(s)	2600
PfoI	TCCNGGA	3 cut(s)	507, 2148, 2704
Ple19I	CGATCG	1 cut(s)	526
PleI	GAGTC	2 cut(s)	505, 2479
PluTI	GGCGCC	1 cut(s)	1294
PmeI	GTTTAAAC	1 cut(s)	2896
PpsI	GAGTC	2 cut(s)	505, 2479
PscI	ACATGT	1 cut(s)	2302
Psp124BI	GAGCTC	1 cut(s)	1699
Psp6I	CCWGG	5 cut(s)	507, 654, 812, 1065, 2148
PspFI	CCCAGC	1 cut(s)	2291
PspGI	CCWGG	5 cut(s)	507, 654, 812, 1065, 2148
PspOMI	GGGCCC	1 cut(s)	1943
PsrI	GAACNNNNNNTAC	2 cut(s)	1749, 1781
PstI	CTGCAG	2 cut(s)	1527, 2766
PstNI	CAGNNNCTG	2 cut(s)	95, 2600
PsuI	RGATCY	1 cut(s)	1081
PvuI	CGATCG	1 cut(s)	526
PvuII	CAGCTG	3 cut(s)	92, 2039, 2432
RsaI	GTAC	4 cut(s)	1488, 1554, 2043, 2460
RsaNI	GTAC	4 cut(s)	1487, 1553, 2042, 2459
RseI	CAYNNNNRTG	3 cut(s)	1211, 1832, 1850
SacI	GAGCTC	1 cut(s)	1699
SalI	GTCGAC	1 cut(s)	2933
Sau3AI	GATC	7 cut(s)	351, 523, 1081, 2190, 2268, 2701, 3010
SchI	GAGTC	2 cut(s)	506, 2480
ScrFI	CCNGG	7 cut(s)	100, 509, 656, 814, 1067, 2150, 2706
SduI	GDGCHC	4 cut(s)	911, 1699, 1947, 2299
SfcI	CTRYAG	5 cut(s)	873, 1523, 1536, 1733, 2762
SfoI	GGCGCC	1 cut(s)	1292
SfuI	TTCGAA	1 cut(s)	81
SinI	GGWCC	6 cut(s)	676, 829, 1541, 1637, 1971, 2342
SmiMI	CAYNNNNRTG	3 cut(s)	1211, 1832, 1850
SmlI	CTYRAG	4 cut(s)	169, 269, 1711, 1860
SmoI	CTYRAG	4 cut(s)	169, 269, 1711, 1860
SseBI	AGGCCT	1 cut(s)	2855
SsiI	CCGC	7 cut(s)	252, 754, 785, 946, 2335, 2563, 2955
SspDI	GGCGCC	1 cut(s)	1290
SspMI	CTAG	6 cut(s)	332, 389, 1079, 1124, 2838, 2867
SstI	GAGCTC	1 cut(s)	1699
StuI	AGGCCT	1 cut(s)	2855
StyD4I	CCNGG	7 cut(s)	98, 507, 654, 812, 1065, 2148, 2704
TaaI	ACNGT	5 cut(s)	1262, 1415, 2031, 2277, 2451
TaiI	ACGT	5 cut(s)	108, 522, 822, 2500, 3003
TaqI	TCGA	7 cut(s)	81, 495, 522, 998, 1744, 2748, 2934
TaqII	GACCGA	1 cut(s)	1610
TatI	WGTACW	3 cut(s)	1486, 1552, 2041
TauI	GCSGC	2 cut(s)	254, 949
TscAI	CASTG	7 cut(s)	597, 1420, 2137, 2282, 2401, 2673, 2682
TseFI	GTSAC	3 cut(s)	1415, 1664, 2137
Tsp45I	GTSAC	3 cut(s)	1415, 1664, 2137
TspRI	CASTG	7 cut(s)	597, 1420, 2137, 2282, 2401, 2673, 2682
Van91I	CCANNNNNTGG	1 cut(s)	2600
Vha464I	CTTAAG	1 cut(s)	169
VpaK11BI	GGWCC	6 cut(s)	676, 829, 1541, 1637, 1971, 2342
XagI	CCTNNNNNAGG	1 cut(s)	2654
XapI	RAATTY	3 cut(s)	994, 1573, 2816
XbaI	TCTAGA	2 cut(s)	388, 2866
XceI	RCATGY	2 cut(s)	2159, 2306
XcmI	CCANNNNNNNNNTGG	2 cut(s)	820, 925
XmiI	GTMKAC	2 cut(s)	1732, 2934
XmnI	GAANNNNTTC	2 cut(s)	786, 1056
XspI	CTAG	6 cut(s)	332, 389, 1079, 1124, 2838, 2867
ZraI	GACGTC	1 cut(s)	106
Zsp2I	ATGCAT	1 cut(s)	1367

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.