Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0001613

Physical Location & Seq

Genomic Coordinates Reverse (-)

29614656 .. 29619334

Gene Structure 4679 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G315200.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3027 bp

ATGGCGAAGGATATTGCTGTTAGTGCCTCCTTGGTTCCAGTGTCTGAATTACTCTCTGAGACATTCCTTGCCATGTCTGATACTATACATGCAGCCAAGGAAGTCCTCATTCAGAAAGAAAATTTCAAAGTATTCTCAAGGTACTTGGAGAAGACCTCTTCTATTTTGAAAGAGTTGTCAAAGCAAAACATTGAGTGTTCAGAAAGCTTAACCAATGCTCTGAAGATTCTCAACCGAGAGGTTGATGTTGCTAAGCAGCTAGCTCTAGATTGCAGCAAAAGAAATAAAGTTTATCTCTTAATCAATTGCCGGAAGATTGTTGAGTCCCTAGAGAGCTGTACAAAAGAGATTGGCAGAGCTCTTGGTCTAATCCCACTAGCATCTTTGGATGTTTCATCTGGTATAAATAGCCAGATTAGCAAGATGTTCAAGAATATGTTGGATGGCGAATATCGAGCAACTGTGGAAGAGGAGGAGATTTTGGCAAAATTTGAGCTAGGCATACAAGAGCAGAATGCTGATCGATCCTATGCAAACAATTTGCTTGTTCATATTGCTGAGGCTCTTGGGATCTCTAATGACCAGTCTGCATGGGAAAAGGAGTTTGAGGAGTTCAAACGCGAATTAGACGATACCAATACCAGAAAAGACCTGGAAGAAAATTTGCATATGGAACAGATATTAGCATTGCTTCAGAAGGCTAATGCCACTACATCTGCTGAGGACAAAGAGAATGATTATTTTGAAAAGAGAAATTCTGTGGGTAGGCTACCATTAGAACCTTTTGACCAATTTTTTTGTCCCGTCACTCGTGAGATCATGGTGGATCCTGTGGAAGTTTCCTCTCATTGCACATTTGAGAGAAGTGTGATAGAGGAGTGGTTTGCAGAAGGTAAGAATCACTGTCCTGTGACTGATATTCCCTTGGACACTTCAGTTCTACTTCCCAACAAAGCACTAAAGCGATCAATTGAAGAATGGAAAGATAGGAAAACCATCTTTATGATTACCTCTATTAAACCCAAACTCCAGTCAAATGAAGAGCAAGAAGTGCTTCAATCGTTAGACAAGCTACAGAATCTGTGCACAGAAAAAGAGTTGCACCGAGAATGGGTGACACGGGAGGACTACATTCCTGTCCTTGTTAGACTTCTTCTTTCAAAAAACCGAGAAATAAGAAAGCATGCTCTTGCCATCCTCTCAATCCTTGCAAAAGATGGTGAAGAAACTAAGGGAAGAATCATAAAAGTGGATAATGCACTGGAATCCATTGTCCACTCACTTGCACGCCATATTGGGGAAAGAAAGTTAGCATTGCAGTTGTTACTGGAACTATCTAAAAGTAGGGCTGCACGAGATTTAATGGGAAATGTTCAGGGATGCATACTTCTCCTAGTAACAATGTTAAGTAATGAAGATAATGAAGTCATCAGAGATGTGAACGTGCTTCTAGAAAATCTGTCTTTCGATGATCAGAATGTTATACATATGGCGAAAGCGAATTATTTTAAACCTCTGTTGAAGCTTCTTTCTTCAGGACCACAAGATGTTAAAGTGCTTATGGCTGGAACTTTGTCGGAAATTGAACTGACTGACCACAACAAACTGTCCATAGTTAAAGATGGGGCACTAGGACCGCTTCTTCAACTGCTTTCACATAGTGATTTAGAAAAGAGGAAAGTGGGCGTCAAAGCTCTTCTTCACCTCTCCAAATTACCACAAAATGGCCTGCAGATGATTAGAGAAGGCGCAGTTGGACCACTATTTGAACTTCTGTATTGTCATAGTTTATTATCACCAACCTTGCGTGAACAGGTAGCTGAGACAATTATGCACCTTGCCATATCGACCACCACTGAAGAAGCCGCTCGGGAGCAGGTCTCTTTGTTAGACTCCGAAGAAGAAATTTTTAAGCTCTTTTCCCTAATATCTTTAACAGGACCTGACATACAAAGAAGCATTCTCAAAACCTTCCATGCAATGTGCCAATCTTCTTCTGGTTCAGACATCAGACGAAAGTTGAGACAGCTCTCTGCTGTCCAAGTATTAGTTCAGTTATGTGAGGCTGATAACCCTGCTGTTAGGGCAAACGCCATGAAGTTGTTCTTTTGCTTGACAGAAGACGGCGGTGATGACAGCACATTTTTGGAGCATGTAAGTCAAAGGTGCATTGAGGCGCTGCTAAGGATTATAACAAGTTCCAGTGATGTGGGGGAAATAGCTGCTGCGATGGGTATTATTGCTAATCTTCCCAAGGACCCGGAGATGACCGGGTTGCTTCTGGATGCTGAGGCACTTCAAATCATCTGCAGTTGTCTAAGTGATGGAAATAGAGACGCGTCGTATCGAAGGCAGGTAATAGAGAATGCTGTTGGAGCTCTATGCCGTTTCACAGTTCCAACAAATCAGGAATGGCAGAGAAAAGTAGCTGAAGCCGGTATTATCCCAGTGCTGGTACAGCTACTGGCTTCTGGAACTGCTTTGACCAAACAAAATGCTGCTATTTCACTTAAACAGCTATCACAAAGTTCCAAAAGCTTGAGCAAGCCAATAAAGAAGCCTGGGTTTTGCCTGTGCTGCTTGTCTGCACCTGAATCTGGCTGCCCTGCACACCTAGGCATTTGCACAGTTGAATCTTCATTCTGCATAGTAAAGGCCAATGCTCTGGAACACCTTGTGAGATTGCTTGGGGAGGCAGATGTGGGAGCCTGCGAAGCTTCTCTTGATGCACTTTTGACACTCATTGATGACCAAGAACAAGGGCAAGGAGGCAAGGTGCTTGATGAAGCAAAGGCCGTCGTTCCGATTGTAAAGTTGCTTAGTTCACAATCTGCTAGGTTGCAAGGAAAATCTCTCATGGCTTTAGAAAGGATTTTTCAAGTAAATGAGTTGTTTCTTAAATATGGAGCTTCAGCCCGCATGGCATTGGTGGACATTACTCAGAAGAAAAATAGTGACATGAAATCTCTGGCTGCCAAGCTACTTGCTCAGTTGGGTGTGCTTGGTACACAGTCTTCTTATTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm U-box

Protein Analysis

1009

Amino Acids

111.75

Weight (kDa)

5.54

Isoelectric Point (pI)

44.07

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001613)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g17110 FvH4_7g32250
malus_domestica	MD01G1085600.v1.1 MD07G1154800.v1.1 MD07G1295700.v1.1
prunus_persica	Prupe.2G193400_v2.0.a1 Prupe.2G315200_v2.0.a1 Prupe.2G315200_v2.0.a1 Prupe.2G315200_v2.0.a1 Prupe.2G315200_v2.0.a1 Prupe.2G315200_v2.0.a1 Prupe.2G315200_v2.0.a1
pyrus_communis	pycom07g15200 pycom07g26840
rosa_chinensis	RchiOBHm_Chr1g0360521 RchiOBHm_Chr1g0381931
rosa_laevigata	RLG00000026199 RLG00000027799
rosa_multiflora	Rmu_sc0010238.1_g000006 Rmu_ssc0000337.1_g000005
rosa_roxburghii	Rroxscaffold_4G00278330 Rroxscaffold_4G00296020
rosa_rugosa	Rorug01G0279400 Rorug01G0279500 Rorug01G0279600 Rorug01G0279700 Rorug01G0432300
rosa_samantha	Rh1AG291700 Rh1AG455500 Rh1BG256700 Rh1BG412700 Rh1CG274400 Rh1CG427500 Rh1DG286500 Rh1DG445000
rosa_wichuraiana	Rw1G025840 Rw1G041360 Rw1G041490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2192
Acc36I	ACCTGC	2 cut(s)	1867, 2344
AccB7I	CCANNNNNTGG	1 cut(s)	1724
AccBSI	CCGCTC	1 cut(s)	1868
AccII	CGCG	2 cut(s)	621, 2339
AciI	CCGC	4 cut(s)	1637, 1866, 2127, 2917
AclWI	GGATC	4 cut(s)	519, 578, 821, 834
AcsI	RAATTY	5 cut(s)	121, 488, 661, 754, 1905
AcuI	CTGAAG	7 cut(s)	242, 677, 918, 1518, 1878, 2451, 2895
AcyI	GRCGYC	1 cut(s)	1686
AdeI	CACNNNGTG	2 cut(s)	1661, 2677
AfaI	GTAC	4 cut(s)	143, 340, 2457, 3007
AfiI	CCNNNNNNNGG	5 cut(s)	1111, 1297, 1724, 2452, 2597
AflIII	ACRYGT	1 cut(s)	2337
AjnI	CCWGG	2 cut(s)	651, 2560
AjuI	GAANNNNNNNTTGG	4 cut(s)	1737, 1769, 2034, 2066
Alw21I	GWGCWC	3 cut(s)	361, 1088, 2380
Alw26I	GTCTC	5 cut(s)	53, 1817, 1885, 2017, 2328
Alw44I	GTGCAC	1 cut(s)	1084
AlwI	GGATC	4 cut(s)	519, 578, 821, 834
AlwNI	CAGNNNCTG	4 cut(s)	44, 1081, 1943, 2464
Ama87I	CYCGRG	1 cut(s)	1869
AoxI	GGCC	3 cut(s)	1726, 2655, 2793
ApaLI	GTGCAC	1 cut(s)	1084
ApoI	RAATTY	5 cut(s)	121, 488, 661, 754, 1905
Asp700I	GAANNNNTTC	2 cut(s)	1053, 2102
AspA2I	CCTAGG	1 cut(s)	2614
AspLEI	GCGC	2 cut(s)	1751, 2179
AspS9I	GGNCC	5 cut(s)	1538, 1634, 1757, 1940, 2257
AsuC2I	CCSGG	2 cut(s)	2261, 2272
AsuHPI	GGTGA	5 cut(s)	1126, 1232, 1694, 1788, 2141
AsuNHI	GCTAGC	1 cut(s)	259
AvaI	CYCGRG	1 cut(s)	1869
AvaII	GGWCC	5 cut(s)	1538, 1634, 1757, 1940, 2257
AvrII	CCTAGG	1 cut(s)	2614
BaeGI	GKGCMC	2 cut(s)	1088, 1630
BamHI	GGATCC	1 cut(s)	826
BanII	GRGCYC	2 cut(s)	361, 2380
BarI	GAAGNNNNNNTAC	1 cut(s)	2998
BauI	CACGAG	2 cut(s)	810, 1353
BbsI	GAAGAC	3 cut(s)	158, 2127, 3006
Bbv12I	GWGCWC	3 cut(s)	361, 1088, 2380
BbvCI	CCTCAGC	3 cut(s)	558, 720, 2289
BccI	CCATC	7 cut(s)	437, 1004, 1202, 1211, 1616, 2224, 2318
BceAI	ACGGC	3 cut(s)	2140, 2370, 2780
BciT130I	CCWGG	2 cut(s)	653, 2562
BclI	TGATCA	1 cut(s)	1471
BcnI	CCSGG	2 cut(s)	2261, 2272
BcoDI	GTCTC	5 cut(s)	53, 1817, 1885, 2017, 2328
BfmI	CTRYAG	3 cut(s)	1073, 1730, 2308
BfoI	RGCGCY	1 cut(s)	2180
BfuAI	ACCTGC	2 cut(s)	1867, 2344
BglI	GCCNNNNNGGC	1 cut(s)	2921
BlnI	CCTAGG	1 cut(s)	2614
BlpI	GCTNAGC	1 cut(s)	252
Bme1390I	CCNGG	4 cut(s)	653, 2261, 2272, 2562
Bme18I	GGWCC	5 cut(s)	1538, 1634, 1757, 1940, 2257
BmeT110I	CYCGRG	1 cut(s)	1869
BmgT120I	GGNCC	5 cut(s)	1538, 1634, 1757, 1940, 2257
BmiI	GGNNCC	4 cut(s)	36, 828, 2259, 2707
BmrFI	CCNGG	4 cut(s)	653, 2261, 2272, 2562
BmrI	ACTGGG	1 cut(s)	2441
BmsI	GCATC	4 cut(s)	389, 1370, 2275, 2716
BmtI	GCTAGC	1 cut(s)	263
BmuI	ACTGGG	1 cut(s)	2441
BpiI	GAAGAC	3 cut(s)	158, 2127, 3006
BplI	GAGNNNNNCTC	4 cut(s)	140, 172, 1865, 1897
BpmI	CTGGAG	1 cut(s)	1013
Bpu10I	CCTNAGC	4 cut(s)	558, 720, 2183, 2289
Bpu1102I	GCTNAGC	1 cut(s)	252
BpuEI	CTTGAG	2 cut(s)	121, 2560
BpuMI	CCSGG	2 cut(s)	2261, 2272
Bsa29I	ATCGAT	1 cut(s)	523
BsaHI	GRCGYC	1 cut(s)	1686
BsaI	GGTCTC	1 cut(s)	1885
BsaJI	CCNNGG	6 cut(s)	30, 96, 924, 2253, 2561, 2614
BsaXI	ACNNNNNCTCC	4 cut(s)	1011, 1041, 2760, 2790
Bsc4I	CCNNNNNNNGG	5 cut(s)	1111, 1297, 1724, 2452, 2597
Bse118I	RCCGGY	1 cut(s)	2435
Bse1I	ACTGG	8 cut(s)	38, 583, 1030, 1266, 1332, 2202, 2447, 2469
Bse3DI	GCAATG	4 cut(s)	686, 847, 1313, 1986
BseBI	CCWGG	2 cut(s)	653, 2562
BseCI	ATCGAT	1 cut(s)	523
BseDI	CCNNGG	6 cut(s)	30, 96, 924, 2253, 2561, 2614
BseGI	GGATG	5 cut(s)	394, 448, 1194, 1385, 2290
BseLI	CCNNNNNNNGG	5 cut(s)	1111, 1297, 1724, 2452, 2597
BseMI	GCAATG	4 cut(s)	686, 847, 1313, 1986
BseMII	CTCAG	7 cut(s)	48, 549, 711, 1812, 2280, 2954, 3002
BseNI	ACTGG	8 cut(s)	38, 583, 1030, 1266, 1332, 2202, 2447, 2469
BseRI	GAGGAG	4 cut(s)	485, 488, 623, 890
BseSI	GKGCMC	2 cut(s)	1088, 1630
BsgI	GTGCAG	3 cut(s)	1335, 2571, 2592
Bsh1236I	CGCG	2 cut(s)	621, 2339
BshFI	GGCC	3 cut(s)	1728, 2657, 2795
BshVI	ATCGAT	1 cut(s)	523
BsiHKAI	GWGCWC	3 cut(s)	361, 1088, 2380
BsiHKCI	CYCGRG	1 cut(s)	1869
BsiSI	CCGG	4 cut(s)	310, 2261, 2271, 2436
BslFI	GGGAC	2 cut(s)	310, 786
BslI	CCNNNNNNNGG	5 cut(s)	1111, 1297, 1724, 2452, 2597
BsmAI	GTCTC	5 cut(s)	53, 1817, 1885, 2017, 2328
BsmBI	CGTCTC	1 cut(s)	2328
BsmFI	GGGAC	2 cut(s)	310, 786
BsmI	GAATGC	3 cut(s)	520, 1959, 2371
BsnI	GGCC	3 cut(s)	1728, 2657, 2795
Bso31I	GGTCTC	1 cut(s)	1885
BsoBI	CYCGRG	1 cut(s)	1869
Bsp1286I	GDGCHC	4 cut(s)	361, 1088, 1630, 2380
Bsp1407I	TGTACA	1 cut(s)	338
Bsp143I	GATC	7 cut(s)	520, 524, 570, 816, 826, 965, 1471
Bsp1720I	GCTNAGC	1 cut(s)	252
BspACI	CCGC	4 cut(s)	1637, 1866, 2127, 2917
BspANI	GGCC	3 cut(s)	1728, 2657, 2795
BspCNI	CTCAG	7 cut(s)	49, 550, 712, 1813, 2281, 2953, 3001
BspDI	ATCGAT	1 cut(s)	523
BspFNI	CGCG	2 cut(s)	621, 2339
BspLI	GGNNCC	4 cut(s)	36, 828, 2259, 2707
BspMAI	CTGCAG	2 cut(s)	1734, 2312
BspMI	ACCTGC	2 cut(s)	1867, 2344
BspOI	GCTAGC	1 cut(s)	263
BspPI	GGATC	4 cut(s)	519, 578, 821, 834
BspQI	GCTCTTC	2 cut(s)	1035, 1701
BspTNI	GGTCTC	1 cut(s)	1885
BsrBI	CCGCTC	1 cut(s)	1868
BsrDI	GCAATG	4 cut(s)	686, 847, 1313, 1986
BsrFI	RCCGGY	1 cut(s)	2435
BsrGI	TGTACA	1 cut(s)	338
BsrI	ACTGG	8 cut(s)	38, 583, 1030, 1266, 1332, 2202, 2447, 2469
BssAI	RCCGGY	1 cut(s)	2435
BssECI	CCNNGG	6 cut(s)	30, 96, 924, 2253, 2561, 2614
BssMI	GATC	7 cut(s)	520, 524, 570, 816, 826, 965, 1471
BssNI	GRCGYC	1 cut(s)	1686
BssSI	CACGAG	2 cut(s)	810, 1353
BssT1I	CCWWGG	5 cut(s)	30, 96, 924, 2253, 2614
Bst2BI	CACGAG	2 cut(s)	810, 1353
Bst2UI	CCWGG	2 cut(s)	653, 2562
Bst4CI	ACNGT	6 cut(s)	463, 905, 1608, 2395, 2629, 3012
Bst6I	CTCTTC	4 cut(s)	163, 462, 1035, 1701
BstACI	GRCGYC	1 cut(s)	1686
BstAPI	GCANNNNNTGC	1 cut(s)	1051
BstAUI	TGTACA	1 cut(s)	338
BstC8I	GCNNGC	7 cut(s)	261, 1185, 1288, 1730, 2546, 2710, 2917
BstF5I	GGATG	5 cut(s)	394, 448, 1194, 1385, 2290
BstFNI	CGCG	2 cut(s)	621, 2339
BstH2I	RGCGCY	1 cut(s)	2180
BstHHI	GCGC	2 cut(s)	1751, 2179
BstKTI	GATC	7 cut(s)	523, 527, 573, 819, 829, 968, 1474
BstMAI	GTCTC	5 cut(s)	53, 1817, 1885, 2017, 2328
BstMBI	GATC	7 cut(s)	520, 524, 570, 816, 826, 965, 1471
BstMWI	GCNNNNNNNGC	9 cut(s)	23, 417, 1051, 2084, 2375, 2458, 2577, 2714, 2921
BstNI	CCWGG	2 cut(s)	653, 2562
BstNSI	RCATGY	3 cut(s)	92, 1187, 2156
BstSCI	CCNGG	4 cut(s)	651, 2259, 2270, 2560
BstSFI	CTRYAG	3 cut(s)	1073, 1730, 2308
BstSLI	GKGCMC	2 cut(s)	1088, 1630
BstUI	CGCG	2 cut(s)	621, 2339
BstV2I	GAAGAC	3 cut(s)	158, 2127, 3006
BstX2I	RGATCY	2 cut(s)	570, 826
BstXI	CCANNNNNNTGG	2 cut(s)	2209, 2665
BstYI	RGATCY	2 cut(s)	570, 826
Bsu15I	ATCGAT	1 cut(s)	523
BsuRI	GGCC	3 cut(s)	1728, 2657, 2795
BsuTUI	ATCGAT	1 cut(s)	523
BtgZI	GCGATG	1 cut(s)	2243
BtsCI	GGATG	5 cut(s)	394, 448, 1194, 1385, 2290
BtsIMutI	CAGTG	6 cut(s)	45, 901, 1259, 1854, 2209, 2454
BveI	ACCTGC	2 cut(s)	1867, 2344
Cac8I	GCNNGC	7 cut(s)	261, 1185, 1288, 1730, 2546, 2710, 2917
CaiI	CAGNNNCTG	4 cut(s)	44, 1081, 1943, 2464
CfoI	GCGC	2 cut(s)	1751, 2179
Cfr10I	RCCGGY	1 cut(s)	2435
Cfr13I	GGNCC	5 cut(s)	1538, 1634, 1757, 1940, 2257
ClaI	ATCGAT	1 cut(s)	523
CseI	GACGC	3 cut(s)	1675, 2328, 2345
Csp6I	GTAC	4 cut(s)	142, 339, 2456, 3006
CviQI	GTAC	4 cut(s)	142, 339, 2456, 3006
DpnI	GATC	7 cut(s)	522, 526, 572, 818, 828, 967, 1473
DpnII	GATC	7 cut(s)	520, 524, 570, 816, 826, 965, 1471
DraI	TTTAAA	1 cut(s)	1510
DraIII	CACNNNGTG	2 cut(s)	1661, 2677
Eam1104I	CTCTTC	4 cut(s)	163, 462, 1035, 1701
EarI	CTCTTC	4 cut(s)	163, 462, 1035, 1701
Ecl136II	GAGCTC	2 cut(s)	359, 2378
Eco130I	CCWWGG	5 cut(s)	30, 96, 924, 2253, 2614
Eco24I	GRGCYC	2 cut(s)	361, 2380
Eco31I	GGTCTC	1 cut(s)	1885
Eco47I	GGWCC	5 cut(s)	1538, 1634, 1757, 1940, 2257
Eco53kI	GAGCTC	2 cut(s)	359, 2378
Eco57I	CTGAAG	7 cut(s)	242, 677, 918, 1518, 1878, 2451, 2895
Eco88I	CYCGRG	1 cut(s)	1869
EcoICRI	GAGCTC	2 cut(s)	359, 2378
EcoO109I	RGGNCCY	2 cut(s)	1940, 2257
EcoRII	CCWGG	2 cut(s)	651, 2560
EcoT14I	CCWWGG	5 cut(s)	30, 96, 924, 2253, 2614
EcoT22I	ATGCAT	1 cut(s)	1385
EcoT38I	GRGCYC	2 cut(s)	361, 2380
ErhI	CCWWGG	5 cut(s)	30, 96, 924, 2253, 2614
Esp3I	CGTCTC	1 cut(s)	2328
FalI	AAGNNNNNCTT	8 cut(s)	1038, 1070, 1683, 1715, 2090, 2122, 2706, 2738
FaqI	GGGAC	2 cut(s)	310, 786
FauI	CCCGC	1 cut(s)	2924
FauNDI	CATATG	2 cut(s)	669, 1488
FbaI	TGATCA	1 cut(s)	1471
FokI	GGATG	5 cut(s)	401, 455, 1181, 1392, 2297
FriOI	GRGCYC	2 cut(s)	361, 2380
GlaI	GCGC	2 cut(s)	1750, 2178
GsuI	CTGGAG	1 cut(s)	1013
HaeII	RGCGCY	1 cut(s)	2180
HaeIII	GGCC	3 cut(s)	1728, 2657, 2795
HapII	CCGG	4 cut(s)	310, 2261, 2271, 2436
HgaI	GACGC	3 cut(s)	1675, 2328, 2345
HhaI	GCGC	2 cut(s)	1751, 2179
Hin1I	GRCGYC	1 cut(s)	1686
Hin6I	GCGC	2 cut(s)	1749, 2177
HinP1I	GCGC	2 cut(s)	1749, 2177
HindIII	AAGCTT	4 cut(s)	205, 1523, 2536, 2715
HinfI	GANTC	9 cut(s)	226, 323, 898, 1078, 1239, 1265, 1892, 2594, 2633
HpaII	CCGG	4 cut(s)	310, 2261, 2271, 2436
HphI	GGTGA	5 cut(s)	1126, 1232, 1694, 1788, 2141
Hpy166II	GTNNAC	7 cut(s)	1086, 1276, 1441, 1811, 2825, 2932, 3008
Hpy8I	GTNNAC	7 cut(s)	1086, 1276, 1441, 1811, 2825, 2932, 3008
Hpy99I	CGWCG	2 cut(s)	2344, 2801
HpyAV	CCTTC	5 cut(s)	691, 884, 1739, 1981, 2343
HpyCH4III	ACNGT	6 cut(s)	463, 905, 1608, 2395, 2629, 3012
HpyCH4IV	ACGT	1 cut(s)	1443
HpyF10VI	GCNNNNNNNGC	9 cut(s)	23, 417, 1051, 2084, 2375, 2458, 2577, 2714, 2921
HpySE526I	ACGT	1 cut(s)	1443
Hsp92I	GRCGYC	1 cut(s)	1686
HspAI	GCGC	2 cut(s)	1749, 2177
Ksp22I	TGATCA	1 cut(s)	1471
Kzo9I	GATC	7 cut(s)	520, 524, 570, 816, 826, 965, 1471
LguI	GCTCTTC	2 cut(s)	1035, 1701
LmnI	GCTCC	5 cut(s)	1873, 2149, 2375, 2705, 2906
LweI	GCATC	4 cut(s)	389, 1370, 2275, 2716
MaeII	ACGT	1 cut(s)	1443
MaeIII	GTNAC	6 cut(s)	805, 910, 1114, 1323, 1396, 2954
MalI	GATC	7 cut(s)	522, 526, 572, 818, 828, 967, 1473
MbiI	CCGCTC	1 cut(s)	1868
MboI	GATC	7 cut(s)	520, 524, 570, 816, 826, 965, 1471
MfeI	CAATTG	2 cut(s)	304, 969
MflI	RGATCY	2 cut(s)	570, 826
MhlI	GDGCHC	4 cut(s)	361, 1088, 1630, 2380
MluI	ACGCGT	1 cut(s)	2337
MlyI	GAGTC	2 cut(s)	332, 1886
MmeI	TCCRAC	5 cut(s)	420, 1557, 1735, 2353, 2423
Mph1103I	ATGCAT	1 cut(s)	1385
MroXI	GAANNNNTTC	2 cut(s)	1053, 2102
MslI	CAYNNNNRTG	2 cut(s)	1001, 1247
MspI	CCGG	4 cut(s)	310, 2261, 2271, 2436
MspR9I	CCNGG	4 cut(s)	653, 2261, 2272, 2562
MunI	CAATTG	2 cut(s)	304, 969
Mva1269I	GAATGC	3 cut(s)	520, 1959, 2371
MvaI	CCWGG	2 cut(s)	653, 2562
MvnI	CGCG	2 cut(s)	621, 2339
MwoI	GCNNNNNNNGC	9 cut(s)	23, 417, 1051, 2084, 2375, 2458, 2577, 2714, 2921
NciI	CCSGG	2 cut(s)	2261, 2272
NdeI	CATATG	2 cut(s)	669, 1488
NdeII	GATC	7 cut(s)	520, 524, 570, 816, 826, 965, 1471
NheI	GCTAGC	1 cut(s)	259
NlaIV	GGNNCC	4 cut(s)	36, 828, 2259, 2707
NmuCI	GTSAC	4 cut(s)	805, 910, 1114, 2954
NsiI	ATGCAT	1 cut(s)	1385
NspI	RCATGY	3 cut(s)	92, 1187, 2156
PaeI	GCATGC	1 cut(s)	1187
PciSI	GCTCTTC	2 cut(s)	1035, 1701
PctI	GAATGC	3 cut(s)	520, 1959, 2371
PdmI	GAANNNNTTC	2 cut(s)	1053, 2102
PfeI	GAWTC	7 cut(s)	226, 898, 1078, 1239, 1265, 2594, 2633
PflMI	CCANNNNNTGG	1 cut(s)	1724
PleI	GAGTC	2 cut(s)	331, 1886
PpsI	GAGTC	2 cut(s)	331, 1886
PpuMI	RGGWCCY	2 cut(s)	1940, 2257
PsiI	TTATAA	1 cut(s)	2192
Psp124BI	GAGCTC	2 cut(s)	361, 2380
Psp5II	RGGWCCY	2 cut(s)	1940, 2257
Psp6I	CCWGG	2 cut(s)	651, 2560
PspGI	CCWGG	2 cut(s)	651, 2560
PspN4I	GGNNCC	4 cut(s)	36, 828, 2259, 2707
PspPI	GGNCC	5 cut(s)	1538, 1634, 1757, 1940, 2257
PspPPI	RGGWCCY	2 cut(s)	1940, 2257
PstI	CTGCAG	2 cut(s)	1734, 2312
PstNI	CAGNNNCTG	4 cut(s)	44, 1081, 1943, 2464
PsuI	RGATCY	2 cut(s)	570, 826
RsaI	GTAC	4 cut(s)	143, 340, 2457, 3007
RsaNI	GTAC	4 cut(s)	142, 339, 2456, 3006
RseI	CAYNNNNRTG	2 cut(s)	1001, 1247
SacI	GAGCTC	2 cut(s)	361, 2380
SapI	GCTCTTC	2 cut(s)	1035, 1701
Sau3AI	GATC	7 cut(s)	520, 524, 570, 816, 826, 965, 1471
Sau96I	GGNCC	5 cut(s)	1538, 1634, 1757, 1940, 2257
SchI	GAGTC	2 cut(s)	332, 1886
ScrFI	CCNGG	4 cut(s)	653, 2261, 2272, 2562
SduI	GDGCHC	4 cut(s)	361, 1088, 1630, 2380
SfaNI	GCATC	4 cut(s)	389, 1370, 2275, 2716
SfcI	CTRYAG	3 cut(s)	1073, 1730, 2308
SinI	GGWCC	5 cut(s)	1538, 1634, 1757, 1940, 2257
SmiMI	CAYNNNNRTG	2 cut(s)	1001, 1247
SmlI	CTYRAG	2 cut(s)	136, 2539
SmoI	CTYRAG	2 cut(s)	136, 2539
SphI	GCATGC	1 cut(s)	1187
SsiI	CCGC	4 cut(s)	1637, 1866, 2127, 2917
SstI	GAGCTC	2 cut(s)	361, 2380
StyD4I	CCNGG	4 cut(s)	651, 2259, 2270, 2560
StyI	CCWWGG	5 cut(s)	30, 96, 924, 2253, 2614
TaaI	ACNGT	6 cut(s)	463, 905, 1608, 2395, 2629, 3012
TaiI	ACGT	1 cut(s)	1446
TaqI	TCGA	5 cut(s)	454, 523, 1467, 1847, 2347
TatI	WGTACW	1 cut(s)	338
TauI	GCSGC	1 cut(s)	1868
TfiI	GAWTC	7 cut(s)	226, 898, 1078, 1239, 1265, 2594, 2633
TscAI	CASTG	6 cut(s)	45, 908, 1266, 1861, 2209, 2454
TseFI	GTSAC	4 cut(s)	805, 910, 1114, 2954
Tsp45I	GTSAC	4 cut(s)	805, 910, 1114, 2954
TspDTI	ATGAA	9 cut(s)	384, 539, 1053, 1428, 1437, 2111, 2628, 2799, 2975
TspRI	CASTG	6 cut(s)	45, 908, 1266, 1861, 2209, 2454
Van91I	CCANNNNNTGG	1 cut(s)	1724
VneI	GTGCAC	1 cut(s)	1084
VpaK11BI	GGWCC	5 cut(s)	1538, 1634, 1757, 1940, 2257
XapI	RAATTY	5 cut(s)	121, 488, 661, 754, 1905
XbaI	TCTAGA	2 cut(s)	265, 1450
XceI	RCATGY	3 cut(s)	92, 1187, 2156
XcmI	CCANNNNNNNNNTGG	2 cut(s)	649, 1994
XmaJI	CCTAGG	1 cut(s)	2614
XmnI	GAANNNNTTC	2 cut(s)	1053, 2102
Zsp2I	ATGCAT	1 cut(s)	1385

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.