FvH4_7g18360

ZINC FINGER protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Reverse (-)
15352720 .. 15354842
2123 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g18360.t1

Sequence Viewer

Length: 1158 bp
ATGGAAGAAGCAGCAGATCATCAACACGATCATCATCATCATGATCATCAAGAGGAAGAAGTCATCATAGGCTGCAAGGAAGAACAACATAACACCACCACCACCACCACCACCACCAACAACAACATTATTATCAAGGGCAAGCGTACAAAACGCTTAAGGCCTCAATCTCCAATCCCTTTCGCTATCCCGACAAACTCGTCCACCGCGGAGGGCGGCGGGGGCGTTGGAGGTGGTGAGTGTAACAACAACACTATCAACTCGTCCCCCACCACCTCCTCCGCGGAGGATAGCACCGAGGAAGAGGAGGACATGGCTAATTGTTTGATCCTCTTGGCACAAGGCCATTCCCGAGCTCCTTCCTCGTCCCCCAAGCTGCAACAACCTCATCACAACGCAACAACCACAACGACAAGTCGGAGATTTATGGAAGCAACACCCCTCGCGGCTGCTGTGGGGCCTTCCAAGGTGGTGGCAGCTGCCGGCGGGTATTACGTGTACGAATGTAAGACGTGTAACCGGACATTCCCTTCTTTCCAAGCATTGGGTGGCCACCGGGCGAGTCACAAGAAGCCGAAAGCAGCCATTAACGTGGATGACAAGAAGCATTTTGGAATTGGGCTGCAGTTACCATCGGATGAAGAAGACACACGATTATTCAAGAACATGAACAACACGTCCTCCTCATCCTCACTTTCTCTTCATTTGAGTAACAGGGGGCTGGTCTTGAGTAGTACTAACAACAAGTCTAAGGTTCATGAGTGCTCCATTTGCGGGGCGGAGTTCACCTCCGGCCAGGCCTTGGGAGGCCACATGAGGCGCCACCGGGCGCCGGTTGGAGGACCAGCTGCCAACACAACGTTGGCGTTGACAGCTGCTCCTCCAACAACAGTTCCTTTAGCCTTGGAAGCTCCGCAACCTCAACAACACCAACAGTACCACCACCACCACCAACAACAGCAGCCCTTAAAGAAGCAAAGAAGCATGCTGTCTTTGGATTTGGATCTCAACCTCCCAGCACCCGAAGACGATCATCATCATCGTGATCAATCCAAATTTGTGTTTACACCCAAACAACAGCAGCAGCAACAACCGCAGCAGCCTCAGCAGCAACAGCAACAAGAAAGGTTAAGAATTTTGGTGGATTGTCATTACTAA

Protein Analysis

386

Amino Acids

42.29

Weight (kDa)

6.97

Isoelectric Point (pI)

72.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C2H2_6 PF13912 166 - 192 7.7e-13 C2H2-type zinc finger
zf-C2H2_6 PF13912 252 - 278 1.8e-12 C2H2-type zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016590)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G10470 AT5G04390
fragaria_vesca FvH4_7g18360
malus_domestica MD01G1099800.v1.1 MD07G1166800.v1.1
prunus_persica Prupe.2G205700_v2.0.a1
pyrus_communis pycom07g16190
rosa_chinensis RchiOBHm_Chr1g0362171
rosa_laevigata RLG00000027670
rosa_rugosa Rorug01G0294800
rosa_samantha Rh1BG267500 Rh1CG285700 Rh1DG297500
rosa_wichuraiana Rw1G027100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 199
AccB1I GGYRCC 2 cut(s) 819, 829
AccB7I CCANNNNNTGG 2 cut(s) 544, 802
AccII CGCG 3 cut(s) 209, 284, 446
AclI AACGTT 1 cut(s) 860
AclWI GGATC 2 cut(s) 322, 1011
AcoI YGGCCR 2 cut(s) 550, 793
AcsI RAATTY 2 cut(s) 1055, 1134
AcyI GRCGYC 2 cut(s) 820, 830
AfaI GTAC 4 cut(s) 148, 500, 736, 938
AfiI CCNNNNNNNGG 5 cut(s) 544, 774, 802, 832, 839
AflII CTTAAG 1 cut(s) 157
AflIII ACRYGT 3 cut(s) 495, 512, 675
AgsI TTSAA 1 cut(s) 661
AjiI CACGTC 2 cut(s) 513, 678
AjnI CCWGG 1 cut(s) 795
AloI GAACNNNNNNTCC 2 cut(s) 662, 694
AluBI AGCT 6 cut(s) 356, 376, 479, 848, 875, 911
AluI AGCT 6 cut(s) 356, 376, 479, 848, 875, 911
Alw21I GWGCWC 2 cut(s) 358, 767
AlwI GGATC 2 cut(s) 322, 1011
Ama87I CYCGRG 1 cut(s) 351
AoxI GGCC 7 cut(s) 161, 343, 458, 550, 793, 798, 808
ApoI RAATTY 2 cut(s) 1055, 1134
AspLEI GCGC 2 cut(s) 822, 832
AspS9I GGNCC 2 cut(s) 458, 842
AsuC2I CCSGG 2 cut(s) 557, 827
AsuHPI GGTGA 2 cut(s) 248, 778
AvaI CYCGRG 1 cut(s) 351
AvaII GGWCC 1 cut(s) 842
BalI TGGCCA 1 cut(s) 552
BanI GGYRCC 2 cut(s) 819, 829
BanII GRGCYC 1 cut(s) 358
BbsI GAAGAC 2 cut(s) 651, 1032
Bbv12I GWGCWC 2 cut(s) 358, 767
BbvCI CCTCAGC 1 cut(s) 1104
BccI CCATC 1 cut(s) 640
BciT130I CCWGG 1 cut(s) 797
BclI TGATCA 2 cut(s) 43, 1045
BcnI CCSGG 2 cut(s) 557, 827
BfmI CTRYAG 1 cut(s) 623
BfoI RGCGCY 2 cut(s) 823, 833
BfrI CTTAAG 1 cut(s) 157
BmcAI AGTACT 1 cut(s) 736
Bme1390I CCNGG 3 cut(s) 557, 797, 827
Bme18I GGWCC 1 cut(s) 842
BmeT110I CYCGRG 1 cut(s) 351
BmgBI CACGTC 2 cut(s) 513, 678
BmgT120I GGNCC 2 cut(s) 458, 842
BmiI GGNNCC 3 cut(s) 459, 821, 831
BmrFI CCNGG 3 cut(s) 557, 797, 827
BpiI GAAGAC 2 cut(s) 651, 1032
BplI GAGNNNNNCTC 2 cut(s) 773, 805
Bpu10I CCTNAGC 1 cut(s) 1104
BpuEI CTTGAG 1 cut(s) 748
BpuMI CCSGG 2 cut(s) 557, 827
BsaAI YACGTR 1 cut(s) 496
BsaBI GATNNNNATC 3 cut(s) 33, 1002, 1035
BsaHI GRCGYC 2 cut(s) 820, 830
BsaJI CCNNGG 6 cut(s) 207, 282, 297, 465, 801, 903
BsaWI WCCGGW 1 cut(s) 519
BsaXI ACNNNNNCTCC 4 cut(s) 665, 695, 862, 892
Bsc4I CCNNNNNNNGG 5 cut(s) 544, 774, 802, 832, 839
Bse118I RCCGGY 2 cut(s) 482, 832
Bse8I GATNNNNATC 3 cut(s) 33, 1002, 1035
BseBI CCWGG 1 cut(s) 797
BseDI CCNNGG 6 cut(s) 207, 282, 297, 465, 801, 903
BseGI GGATG 3 cut(s) 601, 643, 686
BseJI GATNNNNATC 3 cut(s) 33, 1002, 1035
BseLI CCNNNNNNNGG 5 cut(s) 544, 774, 802, 832, 839
BseMII CTCAG 1 cut(s) 1118
BseRI GAGGAG 4 cut(s) 268, 320, 673, 870
BseYI CCCAGC 1 cut(s) 1015
Bsh1236I CGCG 3 cut(s) 209, 284, 446
BshFI GGCC 7 cut(s) 163, 345, 460, 552, 795, 800, 810
BshNI GGYRCC 2 cut(s) 819, 829
BsiHKAI GWGCWC 2 cut(s) 358, 767
BsiHKCI CYCGRG 1 cut(s) 351
BsiSI CCGG 6 cut(s) 483, 520, 556, 792, 826, 833
BslFI GGGAC 2 cut(s) 250, 352
BslI CCNNNNNNNGG 5 cut(s) 544, 774, 802, 832, 839
BsmFI GGGAC 2 cut(s) 250, 352
BsnI GGCC 7 cut(s) 163, 345, 460, 552, 795, 800, 810
BsoBI CYCGRG 1 cut(s) 351
Bsp1286I GDGCHC 2 cut(s) 358, 767
Bsp143I GATC 7 cut(s) 16, 28, 43, 327, 1003, 1030, 1045
BspANI GGCC 7 cut(s) 163, 345, 460, 552, 795, 800, 810
BspCNI CTCAG 1 cut(s) 1117
BspFNI CGCG 3 cut(s) 209, 284, 446
BspHI TCATGA 2 cut(s) 40, 757
BspLI GGNNCC 3 cut(s) 459, 821, 831
BspMAI CTGCAG 1 cut(s) 627
BspPI GGATC 2 cut(s) 322, 1011
BspT107I GGYRCC 2 cut(s) 819, 829
BspTI CTTAAG 1 cut(s) 157
BsrFI RCCGGY 2 cut(s) 482, 832
BssAI RCCGGY 2 cut(s) 482, 832
BssECI CCNNGG 6 cut(s) 207, 282, 297, 465, 801, 903
BssMI GATC 7 cut(s) 16, 28, 43, 327, 1003, 1030, 1045
BssNI GRCGYC 2 cut(s) 820, 830
BssT1I CCWWGG 3 cut(s) 465, 801, 903
Bst2UI CCWGG 1 cut(s) 797
Bst4CI ACNGT 2 cut(s) 892, 936
Bst6I CTCTTC 2 cut(s) 297, 705
BstACI GRCGYC 2 cut(s) 820, 830
BstAFI CTTAAG 1 cut(s) 157
BstBAI YACGTR 1 cut(s) 496
BstC8I GCNNGC 3 cut(s) 143, 484, 986
BstDEI CTNAG 2 cut(s) 750, 1104
BstDSI CCRYGG 2 cut(s) 207, 282
BstF5I GGATG 3 cut(s) 601, 643, 686
BstFNI CGCG 3 cut(s) 209, 284, 446
BstH2I RGCGCY 2 cut(s) 823, 833
BstHHI GCGC 2 cut(s) 822, 832
BstKTI GATC 7 cut(s) 19, 31, 46, 330, 1006, 1033, 1048
BstMBI GATC 7 cut(s) 16, 28, 43, 327, 1003, 1030, 1045
BstMWI GCNNNNNNNGC 8 cut(s) 222, 771, 872, 908, 1093, 1105, 1108, 1114
BstNI CCWGG 1 cut(s) 797
BstNSI RCATGY 1 cut(s) 988
BstSCI CCNGG 3 cut(s) 555, 795, 825
BstSFI CTRYAG 1 cut(s) 623
BstUI CGCG 3 cut(s) 209, 284, 446
BstV2I GAAGAC 2 cut(s) 651, 1032
BstX2I RGATCY 1 cut(s) 1003
BstXI CCANNNNNNTGG 2 cut(s) 472, 592
BstYI RGATCY 1 cut(s) 1003
BsuRI GGCC 7 cut(s) 163, 345, 460, 552, 795, 800, 810
BtgI CCRYGG 2 cut(s) 207, 282
BtrI CACGTC 2 cut(s) 513, 678
BtsCI GGATG 3 cut(s) 601, 643, 686
Cac8I GCNNGC 3 cut(s) 143, 484, 986
CciI TCATGA 2 cut(s) 40, 757
CfoI GCGC 2 cut(s) 822, 832
Cfr10I RCCGGY 2 cut(s) 482, 832
Cfr13I GGNCC 2 cut(s) 458, 842
Cfr42I CCGCGG 2 cut(s) 210, 285
Csp6I GTAC 4 cut(s) 147, 499, 735, 937
CviAII CATG 6 cut(s) 41, 313, 667, 758, 814, 985
CviQI GTAC 4 cut(s) 147, 499, 735, 937
DdeI CTNAG 2 cut(s) 750, 1104
DinI GGCGCC 2 cut(s) 821, 831
DpnI GATC 7 cut(s) 18, 30, 45, 329, 1005, 1032, 1047
DpnII GATC 7 cut(s) 16, 28, 43, 327, 1003, 1030, 1045
DrdI GACNNNNNNGTC 1 cut(s) 199
DseDI GACNNNNNNGTC 1 cut(s) 199
EaeI YGGCCR 2 cut(s) 550, 793
Eam1104I CTCTTC 2 cut(s) 297, 705
EarI CTCTTC 2 cut(s) 297, 705
EciI GGCGGA 1 cut(s) 794
Ecl136II GAGCTC 1 cut(s) 356
Eco130I CCWWGG 3 cut(s) 465, 801, 903
Eco147I AGGCCT 2 cut(s) 163, 800
Eco24I GRGCYC 1 cut(s) 358
Eco47I GGWCC 1 cut(s) 842
Eco53kI GAGCTC 1 cut(s) 356
Eco88I CYCGRG 1 cut(s) 351
EcoICRI GAGCTC 1 cut(s) 356
EcoO109I RGGNCCY 1 cut(s) 458
EcoRII CCWGG 1 cut(s) 795
EcoT14I CCWWGG 3 cut(s) 465, 801, 903
EcoT38I GRGCYC 1 cut(s) 358
EgeI GGCGCC 2 cut(s) 821, 831
EheI GGCGCC 2 cut(s) 821, 831
ErhI CCWWGG 3 cut(s) 465, 801, 903
FaeI CATG 6 cut(s) 44, 316, 670, 761, 817, 988
FaiI YATR 9 cut(s) 42, 68, 90, 314, 428, 668, 759, 815, 986
FaqI GGGAC 2 cut(s) 250, 352
FatI CATG 6 cut(s) 40, 312, 666, 757, 813, 984
FauI CCCGC 3 cut(s) 212, 479, 767
FbaI TGATCA 2 cut(s) 43, 1045
FokI GGATG 3 cut(s) 608, 650, 673
FriOI GRGCYC 1 cut(s) 358
GlaI GCGC 2 cut(s) 821, 831
GsaI CCCAGC 1 cut(s) 1019
HaeII RGCGCY 2 cut(s) 823, 833
HaeIII GGCC 7 cut(s) 163, 345, 460, 552, 795, 800, 810
HapII CCGG 6 cut(s) 483, 520, 556, 792, 826, 833
HhaI GCGC 2 cut(s) 822, 832
Hin1I GRCGYC 2 cut(s) 820, 830
Hin1II CATG 6 cut(s) 44, 316, 670, 761, 817, 988
Hin6I GCGC 2 cut(s) 820, 830
HinP1I GCGC 2 cut(s) 820, 830
HincII GTYRAC 1 cut(s) 870
HindII GTYRAC 1 cut(s) 870
HinfI GANTC 1 cut(s) 562
HpaII CCGG 6 cut(s) 483, 520, 556, 792, 826, 833
HphI GGTGA 2 cut(s) 248, 778
Hpy166II GTNNAC 5 cut(s) 204, 499, 786, 870, 1065
Hpy188I TCNGA 2 cut(s) 420, 637
Hpy188III TCNNGA 8 cut(s) 41, 50, 190, 351, 661, 727, 758, 1043
Hpy8I GTNNAC 5 cut(s) 204, 499, 786, 870, 1065
HpyAV CCTTC 3 cut(s) 369, 471, 540
HpyCH4III ACNGT 2 cut(s) 892, 936
HpyCH4IV ACGT 5 cut(s) 495, 512, 591, 677, 860
HpyCH4V TGCA 3 cut(s) 75, 379, 625
HpyF10VI GCNNNNNNNGC 8 cut(s) 222, 771, 872, 908, 1093, 1105, 1108, 1114
HpyF3I CTNAG 2 cut(s) 750, 1104
HpySE526I ACGT 5 cut(s) 495, 512, 591, 677, 860
Hsp92I GRCGYC 2 cut(s) 820, 830
Hsp92II CATG 6 cut(s) 44, 316, 670, 761, 817, 988
HspAI GCGC 2 cut(s) 820, 830
KasI GGCGCC 2 cut(s) 819, 829
KroI GCCGGC 1 cut(s) 482
KroNI GCCGGC 1 cut(s) 484
Ksp22I TGATCA 2 cut(s) 43, 1045
KspI CCGCGG 2 cut(s) 210, 285
Kzo9I GATC 7 cut(s) 16, 28, 43, 327, 1003, 1030, 1045
LmnI GCTCC 4 cut(s) 361, 770, 883, 916
MaeII ACGT 5 cut(s) 495, 512, 591, 677, 860
MaeIII GTNAC 5 cut(s) 242, 515, 563, 627, 710
MalI GATC 7 cut(s) 18, 30, 45, 329, 1005, 1032, 1047
MboI GATC 7 cut(s) 16, 28, 43, 327, 1003, 1030, 1045
MboII GAAGA 8 cut(s) 17, 68, 92, 314, 653, 656, 692, 1037
MflI RGATCY 1 cut(s) 1003
MhlI GDGCHC 2 cut(s) 358, 767
MlsI TGGCCA 1 cut(s) 552
MluCI AATT 4 cut(s) 319, 615, 1055, 1134
MluNI TGGCCA 1 cut(s) 552
Mly113I GGCGCC 2 cut(s) 820, 830
MlyI GAGTC 1 cut(s) 571
MmeI TCCRAC 4 cut(s) 208, 398, 817, 908
Mox20I TGGCCA 1 cut(s) 552
MroNI GCCGGC 1 cut(s) 482
MscI TGGCCA 1 cut(s) 552
MseI TTAA 4 cut(s) 158, 588, 968, 1130
MslI CAYNNNNRTG 3 cut(s) 39, 590, 1041
Msp20I TGGCCA 1 cut(s) 552
MspA1I CMGCKG 5 cut(s) 209, 284, 479, 848, 875
MspCI CTTAAG 1 cut(s) 157
MspI CCGG 6 cut(s) 483, 520, 556, 792, 826, 833
MspR9I CCNGG 3 cut(s) 557, 797, 827
MvaI CCWGG 1 cut(s) 797
MvnI CGCG 3 cut(s) 209, 284, 446
MwoI GCNNNNNNNGC 8 cut(s) 222, 771, 872, 908, 1093, 1105, 1108, 1114
NaeI GCCGGC 1 cut(s) 484
NarI GGCGCC 2 cut(s) 820, 830
NciI CCSGG 2 cut(s) 557, 827
NdeII GATC 7 cut(s) 16, 28, 43, 327, 1003, 1030, 1045
NgoMIV GCCGGC 1 cut(s) 482
NlaIII CATG 6 cut(s) 44, 316, 670, 761, 817, 988
NlaIV GGNNCC 3 cut(s) 459, 821, 831
NmuCI GTSAC 1 cut(s) 563
NspI RCATGY 1 cut(s) 988
PaeI GCATGC 1 cut(s) 988
PagI TCATGA 2 cut(s) 40, 757
PceI AGGCCT 2 cut(s) 163, 800
PdiI GCCGGC 1 cut(s) 484
PflMI CCANNNNNTGG 2 cut(s) 544, 802
PleI GAGTC 1 cut(s) 570
PluTI GGCGCC 2 cut(s) 823, 833
PpsI GAGTC 1 cut(s) 570
Ppu21I YACGTR 1 cut(s) 496
Psp124BI GAGCTC 1 cut(s) 358
Psp1406I AACGTT 1 cut(s) 860
Psp6I CCWGG 1 cut(s) 795
PspFI CCCAGC 1 cut(s) 1015
PspGI CCWGG 1 cut(s) 795
PspN4I GGNNCC 3 cut(s) 459, 821, 831
PspPI GGNCC 2 cut(s) 458, 842
PstI CTGCAG 1 cut(s) 627
PsuI RGATCY 1 cut(s) 1003
PvuII CAGCTG 3 cut(s) 479, 848, 875
RsaI GTAC 4 cut(s) 148, 500, 736, 938
RsaNI GTAC 4 cut(s) 147, 499, 735, 937
RseI CAYNNNNRTG 3 cut(s) 39, 590, 1041
SacI GAGCTC 1 cut(s) 358
SacII CCGCGG 2 cut(s) 210, 285
SaqAI TTAA 4 cut(s) 158, 588, 968, 1130
Sau3AI GATC 7 cut(s) 16, 28, 43, 327, 1003, 1030, 1045
Sau96I GGNCC 2 cut(s) 458, 842
ScaI AGTACT 1 cut(s) 736
SchI GAGTC 1 cut(s) 571
ScrFI CCNGG 3 cut(s) 557, 797, 827
SduI GDGCHC 2 cut(s) 358, 767
SfcI CTRYAG 1 cut(s) 623
SfoI GGCGCC 2 cut(s) 821, 831
Sfr303I CCGCGG 2 cut(s) 210, 285
SgrBI CCGCGG 2 cut(s) 210, 285
SinI GGWCC 1 cut(s) 842
SmiMI CAYNNNNRTG 3 cut(s) 39, 590, 1041
SmlI CTYRAG 2 cut(s) 157, 727
SmoI CTYRAG 2 cut(s) 157, 727
SphI GCATGC 1 cut(s) 988
Sse9I AATT 4 cut(s) 319, 615, 1055, 1134
SseBI AGGCCT 2 cut(s) 163, 800
SspDI GGCGCC 2 cut(s) 819, 829
SstI GAGCTC 1 cut(s) 358
StuI AGGCCT 2 cut(s) 163, 800
StyD4I CCNGG 3 cut(s) 555, 795, 825
StyI CCWWGG 3 cut(s) 465, 801, 903
TaaI ACNGT 2 cut(s) 892, 936
TaiI ACGT 5 cut(s) 498, 515, 594, 680, 863
TasI AATT 4 cut(s) 319, 615, 1055, 1134
TatI WGTACW 1 cut(s) 734
TauI GCSGC 2 cut(s) 219, 449
Tru1I TTAA 4 cut(s) 158, 588, 968, 1130
Tru9I TTAA 4 cut(s) 158, 588, 968, 1130
TseFI GTSAC 1 cut(s) 563
Tsp45I GTSAC 1 cut(s) 563
TspDTI ATGAA 4 cut(s) 654, 683, 692, 746
Van91I CCANNNNNTGG 2 cut(s) 544, 802
Vha464I CTTAAG 1 cut(s) 157
VpaK11BI GGWCC 1 cut(s) 842
XapI RAATTY 2 cut(s) 1055, 1134
XceI RCATGY 1 cut(s) 988
XcmI CCANNNNNNNNNTGG 2 cut(s) 545, 859
ZrmI AGTACT 1 cut(s) 736
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.