ZINC FINGER protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G10470 AT5G04390 |
| fragaria_vesca | FvH4_7g18360 |
| malus_domestica | MD01G1099800.v1.1 MD07G1166800.v1.1 |
| prunus_persica | Prupe.2G205700_v2.0.a1 |
| pyrus_communis | pycom07g16190 |
| rosa_chinensis | RchiOBHm_Chr1g0362171 |
| rosa_laevigata | RLG00000027670 |
| rosa_rugosa | Rorug01G0294800 |
| rosa_samantha | Rh1BG267500 Rh1CG285700 Rh1DG297500 |
| rosa_wichuraiana | Rw1G027100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 864 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 583 |
| AccII | CGCG | 1 cut(s) | 233 |
| AclWI | GGATC | 2 cut(s) | 349, 1044 |
| AcoI | YGGCCR | 1 cut(s) | 244 |
| AcsI | RAATTY | 2 cut(s) | 1088, 1167 |
| AcyI | GRCGYC | 1 cut(s) | 865 |
| AfaI | GTAC | 1 cut(s) | 778 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 379, 583, 819, 884 |
| AflIII | ACRYGT | 2 cut(s) | 551, 720 |
| AgsI | TTSAA | 1 cut(s) | 697 |
| AjiI | CACGTC | 2 cut(s) | 552, 723 |
| AjnI | CCWGG | 3 cut(s) | 312, 456, 897 |
| AluBI | AGCT | 6 cut(s) | 403, 479, 521, 893, 911, 944 |
| AluI | AGCT | 6 cut(s) | 403, 479, 521, 893, 911, 944 |
| Alw21I | GWGCWC | 1 cut(s) | 812 |
| Alw26I | GTCTC | 1 cut(s) | 9 |
| AlwI | GGATC | 2 cut(s) | 349, 1044 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 482 |
| Ama87I | CYCGRG | 1 cut(s) | 378 |
| AoxI | GGCC | 7 cut(s) | 185, 244, 370, 488, 506, 843, 853 |
| ApaI | GGGCCC | 1 cut(s) | 492 |
| ApoI | RAATTY | 2 cut(s) | 1088, 1167 |
| AspLEI | GCGC | 3 cut(s) | 171, 180, 867 |
| AspS9I | GGNCC | 5 cut(s) | 383, 488, 489, 506, 887 |
| AsuC2I | CCSGG | 4 cut(s) | 379, 380, 596, 872 |
| AsuHPI | GGTGA | 3 cut(s) | 275, 584, 823 |
| AvaI | CYCGRG | 1 cut(s) | 378 |
| AvaII | GGWCC | 2 cut(s) | 383, 887 |
| AxyI | CCTNAGG | 1 cut(s) | 182 |
| BaeGI | GKGCMC | 1 cut(s) | 492 |
| BalI | TGGCCA | 1 cut(s) | 246 |
| BanI | GGYRCC | 1 cut(s) | 864 |
| BanII | GRGCYC | 2 cut(s) | 492, 877 |
| BbsI | GAAGAC | 1 cut(s) | 687 |
| Bbv12I | GWGCWC | 1 cut(s) | 812 |
| BccI | CCATC | 5 cut(s) | 206, 218, 230, 493, 676 |
| BciT130I | CCWGG | 3 cut(s) | 314, 458, 899 |
| BclI | TGATCA | 2 cut(s) | 64, 1063 |
| BcnI | CCSGG | 4 cut(s) | 379, 380, 596, 872 |
| BcoDI | GTCTC | 1 cut(s) | 9 |
| BfoI | RGCGCY | 2 cut(s) | 181, 868 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 252, 500 |
| Bme1390I | CCNGG | 7 cut(s) | 314, 379, 380, 458, 596, 872, 899 |
| Bme18I | GGWCC | 2 cut(s) | 383, 887 |
| BmeT110I | CYCGRG | 1 cut(s) | 378 |
| BmgBI | CACGTC | 2 cut(s) | 552, 723 |
| BmgT120I | GGNCC | 5 cut(s) | 383, 488, 489, 506, 887 |
| BmiI | GGNNCC | 5 cut(s) | 384, 489, 490, 866, 876 |
| BmrFI | CCNGG | 7 cut(s) | 314, 379, 380, 458, 596, 872, 899 |
| BpiI | GAAGAC | 1 cut(s) | 687 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 818, 850 |
| BpuEI | CTTGAG | 1 cut(s) | 793 |
| BpuMI | CCSGG | 4 cut(s) | 379, 380, 596, 872 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1035, 1065, 1068 |
| BsaHI | GRCGYC | 1 cut(s) | 865 |
| BsaJI | CCNNGG | 9 cut(s) | 231, 247, 303, 324, 378, 379, 846, 897, 936 |
| BsaWI | WCCGGW | 2 cut(s) | 558, 836 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 710, 740, 898, 928 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 379, 583, 819, 884 |
| Bse118I | RCCGGY | 1 cut(s) | 508 |
| Bse21I | CCTNAGG | 1 cut(s) | 182 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1035, 1065, 1068 |
| BseBI | CCWGG | 3 cut(s) | 314, 458, 899 |
| BseDI | CCNNGG | 9 cut(s) | 231, 247, 303, 324, 378, 379, 846, 897, 936 |
| BseGI | GGATG | 6 cut(s) | 198, 210, 241, 640, 679, 731 |
| BseJI | GATNNNNATC | 3 cut(s) | 1035, 1065, 1068 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 379, 583, 819, 884 |
| BseRI | GAGGAG | 6 cut(s) | 32, 35, 347, 718, 903, 906 |
| BseSI | GKGCMC | 1 cut(s) | 492 |
| BseYI | CCCAGC | 1 cut(s) | 503 |
| Bsh1236I | CGCG | 1 cut(s) | 233 |
| BshFI | GGCC | 7 cut(s) | 187, 246, 372, 490, 508, 845, 855 |
| BshNI | GGYRCC | 1 cut(s) | 864 |
| BsiHKAI | GWGCWC | 1 cut(s) | 812 |
| BsiHKCI | CYCGRG | 1 cut(s) | 378 |
| BsiSI | CCGG | 6 cut(s) | 379, 509, 559, 595, 837, 871 |
| BslFI | GGGAC | 2 cut(s) | 274, 379 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 379, 583, 819, 884 |
| BsmAI | GTCTC | 1 cut(s) | 9 |
| BsmFI | GGGAC | 2 cut(s) | 274, 379 |
| BsmI | GAATGC | 1 cut(s) | 548 |
| BsnI | GGCC | 7 cut(s) | 187, 246, 372, 490, 508, 845, 855 |
| BsoBI | CYCGRG | 1 cut(s) | 378 |
| Bsp120I | GGGCCC | 1 cut(s) | 488 |
| Bsp1286I | GDGCHC | 3 cut(s) | 492, 812, 877 |
| Bsp143I | GATC | 7 cut(s) | 52, 64, 354, 421, 1036, 1063, 1078 |
| BspANI | GGCC | 7 cut(s) | 187, 246, 372, 490, 508, 845, 855 |
| BspFNI | CGCG | 1 cut(s) | 233 |
| BspHI | TCATGA | 1 cut(s) | 802 |
| BspLI | GGNNCC | 5 cut(s) | 384, 489, 490, 866, 876 |
| BspPI | GGATC | 2 cut(s) | 349, 1044 |
| BspT107I | GGYRCC | 1 cut(s) | 864 |
| BsrFI | RCCGGY | 1 cut(s) | 508 |
| BssAI | RCCGGY | 1 cut(s) | 508 |
| BssECI | CCNNGG | 9 cut(s) | 231, 247, 303, 324, 378, 379, 846, 897, 936 |
| BssMI | GATC | 7 cut(s) | 52, 64, 354, 421, 1036, 1063, 1078 |
| BssNI | GRCGYC | 1 cut(s) | 865 |
| BssT1I | CCWWGG | 3 cut(s) | 247, 846, 936 |
| Bst2UI | CCWGG | 3 cut(s) | 314, 458, 899 |
| Bst4CI | ACNGT | 1 cut(s) | 925 |
| Bst6I | CTCTTC | 2 cut(s) | 324, 750 |
| BstACI | GRCGYC | 1 cut(s) | 865 |
| BstC8I | GCNNGC | 4 cut(s) | 167, 492, 510, 523 |
| BstDEI | CTNAG | 2 cut(s) | 182, 795 |
| BstDSI | CCRYGG | 2 cut(s) | 231, 303 |
| BstEII | GGTNACC | 1 cut(s) | 590 |
| BstF5I | GGATG | 6 cut(s) | 198, 210, 241, 640, 679, 731 |
| BstFNI | CGCG | 1 cut(s) | 233 |
| BstH2I | RGCGCY | 2 cut(s) | 181, 868 |
| BstHHI | GCGC | 3 cut(s) | 171, 180, 867 |
| BstKTI | GATC | 7 cut(s) | 55, 67, 357, 424, 1039, 1066, 1081 |
| BstMAI | GTCTC | 1 cut(s) | 9 |
| BstMBI | GATC | 7 cut(s) | 52, 64, 354, 421, 1036, 1063, 1078 |
| BstNI | CCWGG | 3 cut(s) | 314, 458, 899 |
| BstNSI | RCATGY | 1 cut(s) | 1021 |
| BstPI | GGTNACC | 1 cut(s) | 590 |
| BstSCI | CCNGG | 7 cut(s) | 312, 377, 378, 456, 594, 870, 897 |
| BstSLI | GKGCMC | 1 cut(s) | 492 |
| BstUI | CGCG | 1 cut(s) | 233 |
| BstV2I | GAAGAC | 1 cut(s) | 687 |
| BstX2I | RGATCY | 1 cut(s) | 1036 |
| BstYI | RGATCY | 1 cut(s) | 1036 |
| Bsu36I | CCTNAGG | 1 cut(s) | 182 |
| BsuRI | GGCC | 7 cut(s) | 187, 246, 372, 490, 508, 845, 855 |
| BtgI | CCRYGG | 2 cut(s) | 231, 303 |
| BtrI | CACGTC | 2 cut(s) | 552, 723 |
| BtsCI | GGATG | 6 cut(s) | 198, 210, 241, 640, 679, 731 |
| Cac8I | GCNNGC | 4 cut(s) | 167, 492, 510, 523 |
| CaiI | CAGNNNCTG | 1 cut(s) | 482 |
| CciI | TCATGA | 1 cut(s) | 802 |
| CfoI | GCGC | 3 cut(s) | 171, 180, 867 |
| Cfr10I | RCCGGY | 1 cut(s) | 508 |
| Cfr13I | GGNCC | 5 cut(s) | 383, 488, 489, 506, 887 |
| Cfr42I | CCGCGG | 1 cut(s) | 234 |
| Cfr9I | CCCGGG | 1 cut(s) | 378 |
| Csp6I | GTAC | 1 cut(s) | 777 |
| CviAII | CATG | 8 cut(s) | 40, 62, 340, 703, 709, 803, 859, 1018 |
| CviQI | GTAC | 1 cut(s) | 777 |
| DdeI | CTNAG | 2 cut(s) | 182, 795 |
| DinI | GGCGCC | 1 cut(s) | 866 |
| DpnI | GATC | 7 cut(s) | 54, 66, 356, 423, 1038, 1065, 1080 |
| DpnII | GATC | 7 cut(s) | 52, 64, 354, 421, 1036, 1063, 1078 |
| EaeI | YGGCCR | 1 cut(s) | 244 |
| Eam1104I | CTCTTC | 2 cut(s) | 324, 750 |
| EarI | CTCTTC | 2 cut(s) | 324, 750 |
| EciI | GGCGGA | 1 cut(s) | 839 |
| Eco130I | CCWWGG | 3 cut(s) | 247, 846, 936 |
| Eco147I | AGGCCT | 2 cut(s) | 187, 845 |
| Eco24I | GRGCYC | 2 cut(s) | 492, 877 |
| Eco47I | GGWCC | 2 cut(s) | 383, 887 |
| Eco81I | CCTNAGG | 1 cut(s) | 182 |
| Eco88I | CYCGRG | 1 cut(s) | 378 |
| Eco91I | GGTNACC | 1 cut(s) | 590 |
| EcoO109I | RGGNCCY | 2 cut(s) | 383, 488 |
| EcoO65I | GGTNACC | 1 cut(s) | 590 |
| EcoRII | CCWGG | 3 cut(s) | 312, 456, 897 |
| EcoT14I | CCWWGG | 3 cut(s) | 247, 846, 936 |
| EcoT38I | GRGCYC | 2 cut(s) | 492, 877 |
| EgeI | GGCGCC | 1 cut(s) | 866 |
| EheI | GGCGCC | 1 cut(s) | 866 |
| ErhI | CCWWGG | 3 cut(s) | 247, 846, 936 |
| FaeI | CATG | 8 cut(s) | 43, 65, 343, 706, 712, 806, 862, 1021 |
| FaqI | GGGAC | 2 cut(s) | 274, 379 |
| FatI | CATG | 8 cut(s) | 39, 61, 339, 702, 708, 802, 858, 1017 |
| FauI | CCCGC | 3 cut(s) | 499, 518, 812 |
| FbaI | TGATCA | 2 cut(s) | 64, 1063 |
| FokI | GGATG | 6 cut(s) | 185, 197, 248, 647, 686, 718 |
| FriOI | GRGCYC | 2 cut(s) | 492, 877 |
| GlaI | GCGC | 3 cut(s) | 170, 179, 866 |
| GsaI | CCCAGC | 1 cut(s) | 507 |
| HaeII | RGCGCY | 2 cut(s) | 181, 868 |
| HaeIII | GGCC | 7 cut(s) | 187, 246, 372, 490, 508, 845, 855 |
| HapII | CCGG | 6 cut(s) | 379, 509, 559, 595, 837, 871 |
| HhaI | GCGC | 3 cut(s) | 171, 180, 867 |
| Hin1I | GRCGYC | 1 cut(s) | 865 |
| Hin1II | CATG | 8 cut(s) | 43, 65, 343, 706, 712, 806, 862, 1021 |
| Hin6I | GCGC | 3 cut(s) | 169, 178, 865 |
| HinP1I | GCGC | 3 cut(s) | 169, 178, 865 |
| HincII | GTYRAC | 1 cut(s) | 906 |
| HindII | GTYRAC | 1 cut(s) | 906 |
| HinfI | GANTC | 2 cut(s) | 453, 601 |
| HpaII | CCGG | 6 cut(s) | 379, 509, 559, 595, 837, 871 |
| HphI | GGTGA | 3 cut(s) | 275, 584, 823 |
| Hpy166II | GTNNAC | 3 cut(s) | 228, 831, 906 |
| Hpy188I | TCNGA | 2 cut(s) | 450, 673 |
| Hpy188III | TCNNGA | 5 cut(s) | 71, 697, 772, 803, 1076 |
| Hpy8I | GTNNAC | 3 cut(s) | 228, 831, 906 |
| HpyAV | CCTTC | 3 cut(s) | 396, 579, 1055 |
| HpyCH4III | ACNGT | 1 cut(s) | 925 |
| HpyCH4IV | ACGT | 2 cut(s) | 551, 722 |
| HpyCH4V | TGCA | 3 cut(s) | 96, 546, 1100 |
| HpyF3I | CTNAG | 2 cut(s) | 182, 795 |
| HpySE526I | ACGT | 2 cut(s) | 551, 722 |
| Hsp92I | GRCGYC | 1 cut(s) | 865 |
| Hsp92II | CATG | 8 cut(s) | 43, 65, 343, 706, 712, 806, 862, 1021 |
| HspAI | GCGC | 3 cut(s) | 169, 178, 865 |
| KasI | GGCGCC | 1 cut(s) | 864 |
| KroI | GCCGGC | 1 cut(s) | 508 |
| KroNI | GCCGGC | 1 cut(s) | 510 |
| Ksp22I | TGATCA | 2 cut(s) | 64, 1063 |
| KspI | CCGCGG | 1 cut(s) | 234 |
| Kzo9I | GATC | 7 cut(s) | 52, 64, 354, 421, 1036, 1063, 1078 |
| LmnI | GCTCC | 4 cut(s) | 815, 880, 916, 949 |
| MaeII | ACGT | 2 cut(s) | 551, 722 |
| MaeIII | GTNAC | 6 cut(s) | 269, 554, 590, 602, 663, 755 |
| MalI | GATC | 7 cut(s) | 54, 66, 356, 423, 1038, 1065, 1080 |
| MboI | GATC | 7 cut(s) | 52, 64, 354, 421, 1036, 1063, 1078 |
| MboII | GAAGA | 8 cut(s) | 56, 89, 341, 381, 689, 692, 737, 1070 |
| MflI | RGATCY | 1 cut(s) | 1036 |
| MhlI | GDGCHC | 3 cut(s) | 492, 812, 877 |
| MlsI | TGGCCA | 1 cut(s) | 246 |
| MluCI | AATT | 5 cut(s) | 346, 654, 689, 1088, 1167 |
| MluNI | TGGCCA | 1 cut(s) | 246 |
| Mly113I | GGCGCC | 1 cut(s) | 865 |
| MlyI | GAGTC | 1 cut(s) | 610 |
| MmeI | TCCRAC | 3 cut(s) | 428, 862, 944 |
| Mox20I | TGGCCA | 1 cut(s) | 246 |
| MroNI | GCCGGC | 1 cut(s) | 508 |
| MscI | TGGCCA | 1 cut(s) | 246 |
| MseI | TTAA | 2 cut(s) | 1001, 1163 |
| MslI | CAYNNNNRTG | 2 cut(s) | 60, 707 |
| Msp20I | TGGCCA | 1 cut(s) | 246 |
| MspA1I | CMGCKG | 3 cut(s) | 233, 479, 521 |
| MspI | CCGG | 6 cut(s) | 379, 509, 559, 595, 837, 871 |
| MspR9I | CCNGG | 7 cut(s) | 314, 379, 380, 458, 596, 872, 899 |
| Mva1269I | GAATGC | 1 cut(s) | 548 |
| MvaI | CCWGG | 3 cut(s) | 314, 458, 899 |
| MvnI | CGCG | 1 cut(s) | 233 |
| NaeI | GCCGGC | 1 cut(s) | 510 |
| NarI | GGCGCC | 1 cut(s) | 865 |
| NciI | CCSGG | 4 cut(s) | 379, 380, 596, 872 |
| NdeII | GATC | 7 cut(s) | 52, 64, 354, 421, 1036, 1063, 1078 |
| NgoMIV | GCCGGC | 1 cut(s) | 508 |
| NlaIII | CATG | 8 cut(s) | 43, 65, 343, 706, 712, 806, 862, 1021 |
| NlaIV | GGNNCC | 5 cut(s) | 384, 489, 490, 866, 876 |
| NmuCI | GTSAC | 3 cut(s) | 269, 590, 602 |
| NspI | RCATGY | 1 cut(s) | 1021 |
| PagI | TCATGA | 1 cut(s) | 802 |
| PceI | AGGCCT | 2 cut(s) | 187, 845 |
| PctI | GAATGC | 1 cut(s) | 548 |
| PdiI | GCCGGC | 1 cut(s) | 510 |
| PfeI | GAWTC | 1 cut(s) | 453 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 583 |
| PfoI | TCCNGGA | 2 cut(s) | 312, 456 |
| PleI | GAGTC | 1 cut(s) | 609 |
| PluTI | GGCGCC | 1 cut(s) | 868 |
| PpsI | GAGTC | 1 cut(s) | 609 |
| PpuMI | RGGWCCY | 1 cut(s) | 383 |
| Psp5II | RGGWCCY | 1 cut(s) | 383 |
| Psp6I | CCWGG | 3 cut(s) | 312, 456, 897 |
| PspEI | GGTNACC | 1 cut(s) | 590 |
| PspFI | CCCAGC | 1 cut(s) | 503 |
| PspGI | CCWGG | 3 cut(s) | 312, 456, 897 |
| PspN4I | GGNNCC | 5 cut(s) | 384, 489, 490, 866, 876 |
| PspOMI | GGGCCC | 1 cut(s) | 488 |
| PspPI | GGNCC | 5 cut(s) | 383, 488, 489, 506, 887 |
| PspPPI | RGGWCCY | 1 cut(s) | 383 |
| PstNI | CAGNNNCTG | 1 cut(s) | 482 |
| PsuI | RGATCY | 1 cut(s) | 1036 |
| PvuII | CAGCTG | 2 cut(s) | 479, 521 |
| RsaI | GTAC | 1 cut(s) | 778 |
| RsaNI | GTAC | 1 cut(s) | 777 |
| RseI | CAYNNNNRTG | 2 cut(s) | 60, 707 |
| SacII | CCGCGG | 1 cut(s) | 234 |
| SaqAI | TTAA | 2 cut(s) | 1001, 1163 |
| Sau3AI | GATC | 7 cut(s) | 52, 64, 354, 421, 1036, 1063, 1078 |
| Sau96I | GGNCC | 5 cut(s) | 383, 488, 489, 506, 887 |
| SchI | GAGTC | 1 cut(s) | 610 |
| ScrFI | CCNGG | 7 cut(s) | 314, 379, 380, 458, 596, 872, 899 |
| SduI | GDGCHC | 3 cut(s) | 492, 812, 877 |
| SfoI | GGCGCC | 1 cut(s) | 866 |
| Sfr303I | CCGCGG | 1 cut(s) | 234 |
| SgrBI | CCGCGG | 1 cut(s) | 234 |
| SinI | GGWCC | 2 cut(s) | 383, 887 |
| SmaI | CCCGGG | 1 cut(s) | 380 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 60, 707 |
| SmlI | CTYRAG | 1 cut(s) | 772 |
| SmoI | CTYRAG | 1 cut(s) | 772 |
| Sse9I | AATT | 5 cut(s) | 346, 654, 689, 1088, 1167 |
| SseBI | AGGCCT | 2 cut(s) | 187, 845 |
| SspDI | GGCGCC | 1 cut(s) | 864 |
| StuI | AGGCCT | 2 cut(s) | 187, 845 |
| StyD4I | CCNGG | 7 cut(s) | 312, 377, 378, 456, 594, 870, 897 |
| StyI | CCWWGG | 3 cut(s) | 247, 846, 936 |
| TaaI | ACNGT | 1 cut(s) | 925 |
| TaiI | ACGT | 2 cut(s) | 554, 725 |
| TaqI | TCGA | 1 cut(s) | 1075 |
| TasI | AATT | 5 cut(s) | 346, 654, 689, 1088, 1167 |
| TauI | GCSGC | 2 cut(s) | 131, 518 |
| TfiI | GAWTC | 1 cut(s) | 453 |
| Tru1I | TTAA | 2 cut(s) | 1001, 1163 |
| Tru9I | TTAA | 2 cut(s) | 1001, 1163 |
| TseFI | GTSAC | 3 cut(s) | 269, 590, 602 |
| Tsp45I | GTSAC | 3 cut(s) | 269, 590, 602 |
| TspDTI | ATGAA | 6 cut(s) | 555, 690, 719, 725, 737, 791 |
| TspGWI | ACGGA | 1 cut(s) | 320 |
| TspMI | CCCGGG | 1 cut(s) | 378 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 583 |
| VpaK11BI | GGWCC | 2 cut(s) | 383, 887 |
| XapI | RAATTY | 2 cut(s) | 1088, 1167 |
| XceI | RCATGY | 1 cut(s) | 1021 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 254, 584 |
| XmaI | CCCGGG | 1 cut(s) | 378 |