Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0001807

Physical Location & Seq

Genomic Coordinates Reverse (-)

18030386 .. 18036302

Gene Structure 5917 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g22980.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3576 bp

ATGGGGCGTGTAAAGCTGCAAAGTGGAATCAAGGCAGGGGGAGAGCCAAAGGACTCTAACGGACACTATTCCGACAAAGCTACTTTGGCTTGCATCATTAATTCAGAAATAGGTACTGTGTTAGCGGTTATGAGAAGGAATGTAAGGTGGGGAGGACGCTATGCATCAGATGATGATCAGAGGGAGCATTCTCTAATCCATTCTTTGAAGGCTTTGCGCAAGAAGATTTTTTCATGTCAGCATCAGTTGAATACCATCAGTCCTGCTGTGTATCTCCAGCCGTTTCTGGATGTAATTAGATCTGATGAAACTGGTGCACCGATCACTGGTGTTGCTCTGGCATCTGTTTACAATATCTTGACGCTTGATGTGATCGATCAGAATTCTGTCAACCTTGAAGATGCTATGCACTTGTTAATTGATGCTATTACTGGCTGCCGATTTGAGGTGACCGACCCTGCGTCAGAAGAAGTGGTTCTTATGAAGATACTACAGGTTCTTCTGGCCTGCATGAAGAGTAAAGCATCTTTTATGTTGAGTAATCAGCAGGTTTGCACTATAGTGAATACATGTTTCCGTATAGTTCATCAAGCAGCAACAAAGGGCGAGTTGTTGCAACGGATAGCTCGCCACACAATGCATGAGCTTGTTAGATGTATTTTCTCACATCTTCCAGATATCTGTAGCACTGAAAATGCATTGTCAAATGGAAGCACTTCCTCCAAAGAAGAGACTCTGGGGCTCAACAATGAGCATGCACTTGACAGTAGACAATTGGATAATGGCAGCATTAGTGCTGAGTACGACAGTCAACTATTATCCACAAATCCTGCTTTGCATGCTTCACCAGGCGTTGTAGAATCTGGGATGGGTGAGAAGCCAACTGGGGCTTCTGATGGGAAGGATGCTGGGCAAAATGACTTGAATCTCATGACTGAGCCTTTTGGGGTTCCCAGCATGGTGGAAATATTTCAGTTTCTTTGTTCTTTGTTAAACGTTGCTGAGCATATAGGATTGGGTCCTAAATCTAATACCATAGCATTTGATGAAGATGTGCCTCTTTTTTCCTTGACCGTGGTTAATTCGGCTATAGAGTTGGGTGGGTCCTCCATTCAGCGTCACCCCAAGTTACTGAATTTGGTTCGGGATGAATTGTTTCAAAATCTAATGCAATTCGGCCTGTCAACAAGTCCACTTATACTTTCAATGGTATGCAGCATTGTTCTTAATTTGTATCACCATCTGCGGACTGAACTTAAACTACAGCTTGAGGCTTTCTTCTCCTGTGTGATATTGAGGCTTGCAGAAAGCAGGTATGGAGCTTCTTATCAACAGCAGGAGGTAGCCATGGAAGCTCTAGTCGATTTCTGCAGGCAGAAAAATTTTATGGTGGAGATGTACGCTAATTTAGATTGTGACGTAACTTGCAGTAATATCTTTGAAGATCTTGCTAATCTGTTGTCAAAGAGTGCATTCCCTGTTAACAGCCCTTTGTCTTCCATTCACATTCTTGCTTTGGATGGTCTTATTGCTGTTATTCAGGGAATGACAGAGAGGGTAGATAATGGATCTAGTAGTTTATCTGATACTCCTGTGACTCTTGAAGAGTACACTCCATTCTGGATGGTGAAGTGTGACAACTACAGCGATCCTAATCATTGGGTTCCGTTTGTTCGCCGGATGAAGTACATAAAGCGAAGGTTGATGACTGGTGCCGAACATTTTAACCATGACCCAAAGAAAGGGTTGGAGTTCGTCCAAGGAATTCATCTCTTGCCTGAGAAACTTGATCCTCAAAGTGTGGCTTGGTTTTTCAGGTATACAGCTGGGTTGGACAAGAACCTTATTGGGGATTTCTTGGGAAATCATGATGAGTTTTGCATTCAGGTTCTTCATAAATTTGCTGGTACCTTTGATTTCCAAGATATGAACTTAGATACTGCACTCCGCATTTTTTTGGAAACGTTTAGATTGCCTGGTGAATCACAGAAAATACAGAGGGTGCTTGAAGCATTCTCAGAGAGGTACTATGAGCAGTCTCCACTAATTCTAGCTGACAAGGACGCTGCTCTTCTGTTATCATATTCAACCATACTGCTCAATACAGATCATCACAATGTTCAGGTGAAGAAGAAGATGACAGAAGAGGATTTCATTCGAAATAATCGGCACATCAATGGAGGCGAGGATCTTCCCCGAGAGTTCCTGTCAGAGCTGTACCACTCAATATGCAAGAATGAGATCCGCACTACTCCAGAACAAGGTGCTGGTTTTCCTGAAATGAACCCAAGCAGATGGATTGATTTAATTCACAAATCTAAGAAGAATGCTTCATTTATTGTATCCGATTCCAGAGCCTACCTTGATCAAGATATGTTCTCTATAGTGTCTGGGCCTACAATTGCTGCTATATCTGTGGTATTTGATAATGCTGAACAGGAAGAGGTCTACCAAACATGTCTTGATGGCTTTTTAGCTGTTGCCAAGATTTCAGCATGCTATCATCTTGAAGATGTTTTGGATGATCTGGTTGTGTCTCTCTGTAAGTTCACAACCCTCTTAAATTCGTCATATCTTGACGAACCTGAACTAGAATTTGGTGATGATATAAAAGCGAGAATGTCAACTGTGATGGTTTTCACAATTGCCAACCGCTATGGTGATTACATTCGTACTGGATGGAGAAATATTATTGACTGTATCTTAAGATTACACAAGCTTGGTCTTCTTCCTGCTCATGTGGTTCAAGATGCAGCTGATGAGTCGGAGTTTCCCTCTGAGACAGATCATGGAAAACCTGTCACGAATTCCCAACCTACAATTCATACACCTTCCGTTAGTACTCCTAAGAAATCCTCTGGATTCATGGGCCGGTTTAGTCAGCTCTTATATCTTGACACAGAGGAGCCGAAACCACAGCCTACTGAAGAAGAACTCGCTGCTCATCAGTGCACCGTACAGACAGTTCAAGAGTGCCACATTGACAGCATATTTACCGAGAGCAAATTTTTGCAGGCTGAATCCCTCTTACAGCTTTCACAAGCACTGATCTGGGCTGCAGGCCAACTACAGAAAGGGAATAAATCTGCTGAGGATGAAGATACTGTTGTCTTTTGCTTGGAATTGCTGATTGCTATTACCCTGAATAATAGGGATAGGATTATGCTTCTTTGGCAGGGTGTGTATGAGTTCATATCTAACATTGTGCAGTCAACTTTCATGCCTTCTGCCCTGGTAGAAAAGGCTGTCTTTGGACTTCTTCGGATTTGCCAGCGGCTGCTTCCCTATAAGGAAAACCTTGCTGATGAACTTTTGAGGTCACTGCAGCTTGTCTTGAAGCTCGATGCTCGGGTTGCCGATGCATACTGTGAGCAAATTACACAGGAAGTCAGTCGGCTTGTAAAAGCAAATGCCTCTCACATCAGATCTCAATTGGGTTGGCGCATAATTACATCCCTACTCTCAATCACTGCTCGACATCCAGATGCCTCTGAGGCTGGCTTTGACGCACTGTTCTTCATTATGTCAGGTAGATCGTTCTGTATGCGCACTAGATCTTATGGCAGGTTCTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000278 GO:0000281 GO:0000578 GO:0000902 GO:0000910 GO:0000911 GO:0001736 GO:0001738 GO:0002009 GO:0003006 GO:0003674 GO:0005085 GO:0005086 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005829 GO:0005886 GO:0006810 GO:0006897 GO:0007049 GO:0007155 GO:0007164 GO:0007275 GO:0007389 GO:0008150 GO:0009605 GO:0009606 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009826 GO:0009880 GO:0009888 GO:0009914 GO:0009926 GO:0009942 GO:0009987 GO:0010008 GO:0010015 GO:0010053 GO:0010054 GO:0010087 GO:0010101 GO:0010102 GO:0010154 GO:0010274 GO:0010311 GO:0010540 GO:0010817 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016192 GO:0016197 GO:0019899 GO:0021700 GO:0022402 GO:0022414 GO:0022610 GO:0022622 GO:0030154 GO:0031090 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0032506 GO:0032509 GO:0032879 GO:0032989 GO:0040007 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045229 GO:0046907 GO:0046983 GO:0048209 GO:0048316 GO:0048364 GO:0048468 GO:0048469 GO:0048527 GO:0048528 GO:0048589 GO:0048608 GO:0048646 GO:0048729 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051020 GO:0051049 GO:0051179 GO:0051234 GO:0051301 GO:0051641 GO:0051649 GO:0060341 GO:0060429 GO:0060560 GO:0060627 GO:0060918 GO:0061458 GO:0061640 GO:0065007 GO:0065008 GO:0065009 GO:0071554 GO:0071555 GO:0071695 GO:0071840 GO:0071944 GO:0071985 GO:0090558 GO:0090627 GO:0090696 GO:0090697 GO:0090698 GO:0097708 GO:0098588 GO:0098657 GO:0098772 GO:0098791 GO:0098805 GO:0099402 GO:1902410 GO:1903047 GO:1905392 GO:1905393

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

Sec7 Sec7_N

Protein Analysis

1192

Amino Acids

133.43

Weight (kDa)

5.33

Isoelectric Point (pI)

48.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sec7-like_HUS	PF12783	3 - 90	9.4e-22	Mon2/Sec7/BIG1-like, HUS domain
Sec7	PF01369	176 - 359	1.5e-69	Sec7 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001807)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13980 AT1G13980
fragaria_vesca	FvH4_7g07780 FvH4_7g07780 FvH4_7g07780 FvH4_7g07780 FvH4_7g07780 FvH4_7g22980 FvH4_7g22980 FvH4_7g22980 FvH4_7g22980 FvH4_7g22980 FvH4_7g22990
malus_domestica	MD01G1138600.v1.1 MD01G1138700.v1.1 MD07G1202800.v1.1
prunus_persica	Prupe.2G239100_v2.0.a1 Prupe.2G239100_v2.0.a1 Prupe.2G239200_v2.0.a1 Prupe.2G239200_v2.0.a1 Prupe.2G239200_v2.0.a1
pyrus_communis	pycom01g15930 pycom01g15940 pycom07g18980 pycom07g18990
rosa_chinensis	RchiOBHm_Chr1g0368181 RchiOBHm_Chr1g0368191
rosa_laevigata	RLG00000027231 RLG00000027232
rosa_multiflora	Rmu_sc0006033.1_g000001 Rmu_sc0006033.1_g000003
rosa_roxburghii	Rroxscaffold_4G00288810
rosa_rugosa	Rorug01G0339200 Rorug01G0339200 Rorug01G0339200
rosa_samantha	Rh1AG346700 Rh1AG346800 Rh1BG309400 Rh1BG309500 Rh1CG324800 Rh1CG324900 Rh1DG341300 Rh1DG341400
rosa_wichuraiana	Rw1G030820 Rw1G030830 Rw1G030840 Rw1G030850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	218, 3548
Acc36I	ACCTGC	3 cut(s)	538, 1302, 3555
Acc65I	GGTACC	1 cut(s)	1907
AccB1I	GGYRCC	2 cut(s)	1712, 1907
AccI	GTMKAC	3 cut(s)	769, 1820, 2448
AciI	CCGC	6 cut(s)	125, 1246, 1948, 2245, 2653, 3274
AclI	AACGTT	2 cut(s)	996, 1964
AclWI	GGATC	5 cut(s)	1576, 1643, 1784, 2196, 2236
AcsI	RAATTY	9 cut(s)	382, 1135, 1381, 1764, 1898, 2563, 2594, 2806, 3005
AcuI	CTGAAG	1 cut(s)	2946
AfiI	CCNNNNNNNGG	5 cut(s)	326, 445, 1742, 1849, 2261
AflII	CTTAAG	1 cut(s)	2704
AflIII	ACRYGT	2 cut(s)	569, 2456
AhdI	GACNNNNNGTC	1 cut(s)	460
AjnI	CCWGG	3 cut(s)	847, 1975, 3231
AjuI	GAANNNNNNNTTGG	6 cut(s)	874, 906, 2580, 2612, 2805, 2837
AleI	CACNNNNGTG	1 cut(s)	560
Alw21I	GWGCWC	2 cut(s)	319, 2954
Alw26I	GTCTC	4 cut(s)	725, 2043, 2541, 2774
Alw44I	GTGCAC	2 cut(s)	315, 2950
AlwI	GGATC	5 cut(s)	1576, 1643, 1784, 2196, 2236
AlwNI	CAGNNNCTG	2 cut(s)	3277, 3570
Ama87I	CYCGRG	2 cut(s)	2196, 3348
AoxI	GGCC	5 cut(s)	504, 1177, 2393, 2869, 3061
ApaLI	GTGCAC	2 cut(s)	315, 2950
ApoI	RAATTY	9 cut(s)	382, 1135, 1381, 1764, 1898, 2563, 2594, 2806, 3005
AseI	ATTAAT	1 cut(s)	99
Asp700I	GAANNNNTTC	4 cut(s)	474, 715, 969, 1155
Asp718I	GGTACC	1 cut(s)	1907
AspLEI	GCGC	3 cut(s)	219, 3444, 3549
AspS9I	GGNCC	4 cut(s)	1019, 1104, 2393, 2869
AsuII	TTCGAA	1 cut(s)	2158
AvaI	CYCGRG	2 cut(s)	2196, 3348
AvaII	GGWCC	2 cut(s)	1019, 1104
BaeGI	GKGCMC	2 cut(s)	319, 2954
BaeI	ACNNNNGTAYC	4 cut(s)	1578, 1611, 3093, 3126
BanI	GGYRCC	2 cut(s)	1712, 1907
BanII	GRGCYC	1 cut(s)	744
BbsI	GAAGAC	2 cut(s)	1488, 2717
Bbv12I	GWGCWC	2 cut(s)	319, 2954
BbvCI	CCTCAGC	1 cut(s)	3090
BceAI	ACGGC	1 cut(s)	265
BciT130I	CCWGG	3 cut(s)	849, 1977, 3233
BciVI	GTATCC	1 cut(s)	2353
BclI	TGATCA	2 cut(s)	175, 2365
BcoDI	GTCTC	4 cut(s)	725, 2043, 2541, 2774
BfaI	CTAG	5 cut(s)	1358, 1572, 2051, 2591, 3552
BfrI	CTTAAG	1 cut(s)	2704
BfuAI	ACCTGC	3 cut(s)	538, 1302, 3555
BfuI	GTATCC	1 cut(s)	2353
BglI	GCCNNNNNGGC	1 cut(s)	3494
BglII	AGATCT	4 cut(s)	299, 1444, 3425, 3554
BlpI	GCTNAGC	1 cut(s)	1002
BmcAI	AGTACT	1 cut(s)	2842
Bme1390I	CCNGG	3 cut(s)	849, 1977, 3233
Bme18I	GGWCC	2 cut(s)	1019, 1104
BmeRI	GACNNNNNGTC	1 cut(s)	460
BmeT110I	CYCGRG	2 cut(s)	2196, 3348
BmgT120I	GGNCC	4 cut(s)	1019, 1104, 2393, 2869
BmiI	GGNNCC	7 cut(s)	951, 1020, 1105, 1665, 1714, 1909, 2907
BmrFI	CCNGG	3 cut(s)	849, 1977, 3233
BmrI	ACTGGG	1 cut(s)	894
BmuI	ACTGGG	1 cut(s)	894
BpiI	GAAGAC	2 cut(s)	1488, 2717
BplI	GAGNNNNNCTC	2 cut(s)	2759, 2791
BpmI	CTGGAG	2 cut(s)	260, 2238
Bpu10I	CCTNAGC	1 cut(s)	3090
Bpu1102I	GCTNAGC	1 cut(s)	1002
Bpu14I	TTCGAA	1 cut(s)	2158
BpuEI	CTTGAG	1 cut(s)	1289
Bsa29I	ATCGAT	1 cut(s)	375
BsaBI	GATNNNNATC	2 cut(s)	174, 1653
BsaJI	CCNNGG	4 cut(s)	1074, 1347, 1759, 3231
Bsc4I	CCNNNNNNNGG	5 cut(s)	326, 445, 1742, 1849, 2261
Bse118I	RCCGGY	1 cut(s)	2871
Bse1I	ACTGG	6 cut(s)	316, 331, 436, 889, 1714, 2680
Bse8I	GATNNNNATC	2 cut(s)	174, 1653
BseBI	CCWGG	3 cut(s)	849, 1977, 3233
BseCI	ATCGAT	1 cut(s)	375
BseDI	CCNNGG	4 cut(s)	1074, 1347, 1759, 3231
BseJI	GATNNNNATC	2 cut(s)	174, 1653
BseLI	CCNNNNNNNGG	5 cut(s)	326, 445, 1742, 1849, 2261
BseMII	CTCAG	8 cut(s)	789, 927, 993, 1770, 2031, 2769, 3081, 3483
BseNI	ACTGG	6 cut(s)	316, 331, 436, 889, 1714, 2680
BseRI	GAGGAG	1 cut(s)	2918
BseSI	GKGCMC	2 cut(s)	319, 2954
BseYI	CCCAGC	3 cut(s)	908, 953, 1826
BsgI	GTGCAG	2 cut(s)	1926, 3227
BshFI	GGCC	5 cut(s)	506, 1179, 2395, 2871, 3063
BshNI	GGYRCC	2 cut(s)	1712, 1907
BshVI	ATCGAT	1 cut(s)	375
BsiHKAI	GWGCWC	2 cut(s)	319, 2954
BsiHKCI	CYCGRG	2 cut(s)	2196, 3348
BsiSI	CCGG	2 cut(s)	1678, 2872
BslI	CCNNNNNNNGG	5 cut(s)	326, 445, 1742, 1849, 2261
BsmAI	GTCTC	4 cut(s)	725, 2043, 2541, 2774
BsmI	GAATGC	5 cut(s)	187, 1472, 1881, 2012, 2332
BsnI	GGCC	5 cut(s)	506, 1179, 2395, 2871, 3063
BsoBI	CYCGRG	2 cut(s)	2196, 3348
Bsp119I	TTCGAA	1 cut(s)	2158
Bsp1286I	GDGCHC	3 cut(s)	319, 744, 2954
Bsp1720I	GCTNAGC	1 cut(s)	1002
Bsp19I	CCATGG	1 cut(s)	1347
BspACI	CCGC	6 cut(s)	125, 1246, 1948, 2245, 2653, 3274
BspANI	GGCC	5 cut(s)	506, 1179, 2395, 2871, 3063
BspCNI	CTCAG	8 cut(s)	790, 928, 994, 1771, 2030, 2770, 3082, 3484
BspDI	ATCGAT	1 cut(s)	375
BspHI	TCATGA	2 cut(s)	930, 1867
BspLI	GGNNCC	7 cut(s)	951, 1020, 1105, 1665, 1714, 1909, 2907
BspMAI	CTGCAG	3 cut(s)	1373, 3061, 3327
BspMI	ACCTGC	3 cut(s)	538, 1302, 3555
BspPI	GGATC	5 cut(s)	1576, 1643, 1784, 2196, 2236
BspQI	GCTCTTC	1 cut(s)	2076
BspT104I	TTCGAA	1 cut(s)	2158
BspT107I	GGYRCC	2 cut(s)	1712, 1907
BspTI	CTTAAG	1 cut(s)	2704
BsrFI	RCCGGY	1 cut(s)	2871
BsrI	ACTGG	6 cut(s)	316, 331, 436, 889, 1714, 2680
BssAI	RCCGGY	1 cut(s)	2871
BssECI	CCNNGG	4 cut(s)	1074, 1347, 1759, 3231
BssNAI	GTATAC	1 cut(s)	1821
BssT1I	CCWWGG	2 cut(s)	1347, 1759
Bst1107I	GTATAC	1 cut(s)	1821
Bst2UI	CCWGG	3 cut(s)	849, 1977, 3233
Bst6I	CTCTTC	6 cut(s)	509, 723, 1599, 2076, 2139, 2436
BstAFI	CTTAAG	1 cut(s)	2704
BstBI	TTCGAA	1 cut(s)	2158
BstDSI	CCRYGG	2 cut(s)	1074, 1347
BstEII	GGTNACC	1 cut(s)	448
BstHHI	GCGC	3 cut(s)	219, 3444, 3549
BstMAI	GTCTC	4 cut(s)	725, 2043, 2541, 2774
BstMWI	GCNNNNNNNGC	7 cut(s)	13, 86, 839, 1352, 3172, 3353, 3494
BstNI	CCWGG	3 cut(s)	849, 1977, 3233
BstNSI	RCATGY	5 cut(s)	573, 758, 842, 2460, 2499
BstPI	GGTNACC	1 cut(s)	448
BstSCI	CCNGG	3 cut(s)	847, 1975, 3231
BstSLI	GKGCMC	2 cut(s)	319, 2954
BstV2I	GAAGAC	2 cut(s)	1488, 2717
BstX2I	RGATCY	7 cut(s)	299, 1444, 1568, 2188, 2241, 3425, 3554
BstXI	CCANNNNNNTGG	2 cut(s)	961, 2295
BstYI	RGATCY	7 cut(s)	299, 1444, 1568, 2188, 2241, 3425, 3554
BstZ17I	GTATAC	1 cut(s)	1821
Bsu15I	ATCGAT	1 cut(s)	375
BsuI	GTATCC	1 cut(s)	2353
BsuRI	GGCC	5 cut(s)	506, 1179, 2395, 2871, 3063
BsuTUI	ATCGAT	1 cut(s)	375
BtgI	CCRYGG	2 cut(s)	1074, 1347
BtsI	GCAGTG	2 cut(s)	3320, 3468
BtsIMutI	CAGTG	7 cut(s)	324, 687, 2954, 3044, 3320, 3468, 3509
BveI	ACCTGC	3 cut(s)	538, 1302, 3555
CaiI	CAGNNNCTG	2 cut(s)	3277, 3570
CciI	TCATGA	2 cut(s)	930, 1867
CfoI	GCGC	3 cut(s)	219, 3444, 3549
Cfr10I	RCCGGY	1 cut(s)	2871
Cfr13I	GGNCC	4 cut(s)	1019, 1104, 2393, 2869
ClaI	ATCGAT	1 cut(s)	375
CseI	GACGC	6 cut(s)	165, 370, 450, 1106, 2072, 3515
DriI	GACNNNNNGTC	1 cut(s)	460
Eam1104I	CTCTTC	6 cut(s)	509, 723, 1599, 2076, 2139, 2436
Eam1105I	GACNNNNNGTC	1 cut(s)	460
EarI	CTCTTC	6 cut(s)	509, 723, 1599, 2076, 2139, 2436
Eco130I	CCWWGG	2 cut(s)	1347, 1759
Eco24I	GRGCYC	1 cut(s)	744
Eco32I	GATATC	1 cut(s)	679
Eco47I	GGWCC	2 cut(s)	1019, 1104
Eco57I	CTGAAG	1 cut(s)	2946
Eco88I	CYCGRG	2 cut(s)	2196, 3348
Eco91I	GGTNACC	1 cut(s)	448
EcoO109I	RGGNCCY	2 cut(s)	1019, 1104
EcoO65I	GGTNACC	1 cut(s)	448
EcoRI	GAATTC	3 cut(s)	382, 1764, 2806
EcoRII	CCWGG	3 cut(s)	847, 1975, 3231
EcoRV	GATATC	1 cut(s)	679
EcoT14I	CCWWGG	2 cut(s)	1347, 1759
EcoT22I	ATGCAT	4 cut(s)	166, 642, 700, 3364
EcoT38I	GRGCYC	1 cut(s)	744
ErhI	CCWWGG	2 cut(s)	1347, 1759
FalI	AAGNNNNNCTT	6 cut(s)	462, 494, 1789, 1821, 3233, 3265
FbaI	TGATCA	2 cut(s)	175, 2365
FblI	GTMKAC	3 cut(s)	769, 1820, 2448
FriOI	GRGCYC	1 cut(s)	744
FspAI	RTGCGCAY	1 cut(s)	3548
FspBI	CTAG	5 cut(s)	1358, 1572, 2051, 2591, 3552
FspI	TGCGCA	2 cut(s)	218, 3548
GlaI	GCGC	3 cut(s)	218, 3443, 3548
GsaI	CCCAGC	3 cut(s)	912, 957, 1830
GsuI	CTGGAG	2 cut(s)	260, 2238
HaeIII	GGCC	5 cut(s)	506, 1179, 2395, 2871, 3063
HapII	CCGG	2 cut(s)	1678, 2872
HgaI	GACGC	6 cut(s)	165, 370, 450, 1106, 2072, 3515
HhaI	GCGC	3 cut(s)	219, 3444, 3549
Hin6I	GCGC	3 cut(s)	217, 3442, 3547
HinP1I	GCGC	3 cut(s)	217, 3442, 3547
HincII	GTYRAC	6 cut(s)	391, 812, 1185, 1483, 2625, 3213
HindII	GTYRAC	6 cut(s)	391, 812, 1185, 1483, 2625, 3213
HindIII	AAGCTT	1 cut(s)	2717
HpaI	GTTAAC	1 cut(s)	1483
HpaII	CCGG	2 cut(s)	1678, 2872
HpyAV	CCTTC	6 cut(s)	129, 202, 895, 1692, 2841, 3234
HpyCH4IV	ACGT	3 cut(s)	996, 1419, 1964
HpyF10VI	GCNNNNNNNGC	7 cut(s)	13, 86, 839, 1352, 3172, 3353, 3494
HpySE526I	ACGT	3 cut(s)	996, 1419, 1964
HspAI	GCGC	3 cut(s)	217, 3442, 3547
KpnI	GGTACC	1 cut(s)	1911
Ksp22I	TGATCA	2 cut(s)	175, 2365
KspAI	GTTAAC	1 cut(s)	1483
LguI	GCTCTTC	1 cut(s)	2076
LmnI	GCTCC	3 cut(s)	184, 1319, 2905
MaeI	CTAG	5 cut(s)	1358, 1572, 2051, 2591, 3552
MaeII	ACGT	3 cut(s)	996, 1419, 1964
MaeIII	GTNAC	9 cut(s)	448, 1118, 1128, 1415, 1420, 1594, 1634, 2800, 3318
MfeI	CAATTG	4 cut(s)	773, 2400, 2643, 3431
MflI	RGATCY	7 cut(s)	299, 1444, 1568, 2188, 2241, 3425, 3554
MhlI	GDGCHC	3 cut(s)	319, 744, 2954
MlyI	GAGTC	4 cut(s)	47, 727, 1591, 2771
MmeI	TCCRAC	4 cut(s)	96, 1728, 1812, 2745
Mph1103I	ATGCAT	4 cut(s)	166, 642, 700, 3364
MroXI	GAANNNNTTC	4 cut(s)	474, 715, 969, 1155
MslI	CAYNNNNRTG	4 cut(s)	560, 2115, 2175, 3483
MspA1I	CMGCKG	3 cut(s)	1826, 2756, 3274
MspCI	CTTAAG	1 cut(s)	2704
MspI	CCGG	2 cut(s)	1678, 2872
MspR9I	CCNGG	3 cut(s)	849, 1977, 3233
MunI	CAATTG	4 cut(s)	773, 2400, 2643, 3431
Mva1269I	GAATGC	5 cut(s)	187, 1472, 1881, 2012, 2332
MvaI	CCWGG	3 cut(s)	849, 1977, 3233
MwoI	GCNNNNNNNGC	7 cut(s)	13, 86, 839, 1352, 3172, 3353, 3494
NcoI	CCATGG	1 cut(s)	1347
NlaIV	GGNNCC	7 cut(s)	951, 1020, 1105, 1665, 1714, 1909, 2907
NmuCI	GTSAC	7 cut(s)	448, 1118, 1415, 1594, 1634, 2800, 3318
NsbI	TGCGCA	2 cut(s)	218, 3548
NsiI	ATGCAT	4 cut(s)	166, 642, 700, 3364
NspI	RCATGY	5 cut(s)	573, 758, 842, 2460, 2499
NspV	TTCGAA	1 cut(s)	2158
OliI	CACNNNNGTG	1 cut(s)	560
PaeI	GCATGC	3 cut(s)	758, 842, 2499
PagI	TCATGA	2 cut(s)	930, 1867
PciI	ACATGT	2 cut(s)	569, 2456
PciSI	GCTCTTC	1 cut(s)	2076
PctI	GAATGC	5 cut(s)	187, 1472, 1881, 2012, 2332
PdmI	GAANNNNTTC	4 cut(s)	474, 715, 969, 1155
PfeI	GAWTC	7 cut(s)	27, 860, 925, 1982, 2348, 2862, 3020
PleI	GAGTC	4 cut(s)	47, 727, 1591, 2770
PpsI	GAGTC	4 cut(s)	47, 727, 1591, 2770
PpuMI	RGGWCCY	2 cut(s)	1019, 1104
PscI	ACATGT	2 cut(s)	569, 2456
PshBI	ATTAAT	1 cut(s)	99
Psp1406I	AACGTT	2 cut(s)	996, 1964
Psp5II	RGGWCCY	2 cut(s)	1019, 1104
Psp6I	CCWGG	3 cut(s)	847, 1975, 3231
PspEI	GGTNACC	1 cut(s)	448
PspFI	CCCAGC	3 cut(s)	908, 953, 1826
PspGI	CCWGG	3 cut(s)	847, 1975, 3231
PspN4I	GGNNCC	7 cut(s)	951, 1020, 1105, 1665, 1714, 1909, 2907
PspPI	GGNCC	4 cut(s)	1019, 1104, 2393, 2869
PspPPI	RGGWCCY	2 cut(s)	1019, 1104
PsrI	GAACNNNNNNTAC	4 cut(s)	1245, 1277, 2949, 2981
PstI	CTGCAG	3 cut(s)	1373, 3061, 3327
PstNI	CAGNNNCTG	2 cut(s)	3277, 3570
PsuI	RGATCY	7 cut(s)	299, 1444, 1568, 2188, 2241, 3425, 3554
PvuII	CAGCTG	2 cut(s)	1826, 2756
RseI	CAYNNNNRTG	4 cut(s)	560, 2115, 2175, 3483
SapI	GCTCTTC	1 cut(s)	2076
Sau96I	GGNCC	4 cut(s)	1019, 1104, 2393, 2869
ScaI	AGTACT	1 cut(s)	2842
SchI	GAGTC	4 cut(s)	47, 727, 1591, 2771
ScrFI	CCNGG	3 cut(s)	849, 1977, 3233
SduI	GDGCHC	3 cut(s)	319, 744, 2954
SfuI	TTCGAA	1 cut(s)	2158
SinI	GGWCC	2 cut(s)	1019, 1104
SmiMI	CAYNNNNRTG	4 cut(s)	560, 2115, 2175, 3483
SmlI	CTYRAG	2 cut(s)	1268, 2704
SmoI	CTYRAG	2 cut(s)	1268, 2704
SphI	GCATGC	3 cut(s)	758, 842, 2499
SsiI	CCGC	6 cut(s)	125, 1246, 1948, 2245, 2653, 3274
SspI	AATATT	2 cut(s)	969, 2689
SspMI	CTAG	5 cut(s)	1358, 1572, 2051, 2591, 3552
StyD4I	CCNGG	3 cut(s)	847, 1975, 3231
StyI	CCWWGG	2 cut(s)	1347, 1759
TaiI	ACGT	3 cut(s)	999, 1422, 1967
TaqI	TCGA	5 cut(s)	375, 1362, 2158, 3342, 3475
TaqII	GACCGA	1 cut(s)	467
TatI	WGTACW	3 cut(s)	1608, 1686, 2840
TauI	GCSGC	1 cut(s)	3277
TfiI	GAWTC	7 cut(s)	27, 860, 925, 1982, 2348, 2862, 3020
TscAI	CASTG	7 cut(s)	331, 694, 2954, 3051, 3327, 3475, 3516
TseFI	GTSAC	7 cut(s)	448, 1118, 1415, 1594, 1634, 2800, 3318
Tsp45I	GTSAC	7 cut(s)	448, 1118, 1415, 1594, 1634, 2800, 3318
TspGWI	ACGGA	5 cut(s)	75, 566, 634, 1656, 2824
TspRI	CASTG	7 cut(s)	331, 694, 2954, 3051, 3327, 3475, 3516
Vha464I	CTTAAG	1 cut(s)	2704
VneI	GTGCAC	2 cut(s)	315, 2950
VpaK11BI	GGWCC	2 cut(s)	1019, 1104
VspI	ATTAAT	1 cut(s)	99
XapI	RAATTY	9 cut(s)	382, 1135, 1381, 1764, 1898, 2563, 2594, 2806, 3005
XceI	RCATGY	5 cut(s)	573, 758, 842, 2460, 2499
XmiI	GTMKAC	3 cut(s)	769, 1820, 2448
XmnI	GAANNNNTTC	4 cut(s)	474, 715, 969, 1155
XspI	CTAG	5 cut(s)	1358, 1572, 2051, 2591, 3552
ZrmI	AGTACT	1 cut(s)	2842
Zsp2I	ATGCAT	4 cut(s)	166, 642, 700, 3364

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.